BMI1 • K562 NGFTB3S7GQC3TI • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTB3S7GQC3TI data_source Factorbook Download track Download number_of_intervals 95 bp_covered 2,280 output_type transcription factor binding sites significant genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR782WRO biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody BMI1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 2,068 downloaded_date 07/10/2024 release_date 07/07/2014 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF600KEF_GRMMAKRKRBGGTAACTTCCDGRY_filtered.bed.gz processed_file_md5 0ca4c59438a2d35338c681a50a65083f wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF600KEF_GRMMAKRKRBGGTAACTTCCDGRY_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF600KEF_GRMMAKRKRBGGTAACTTCCDGRY_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF600KEF_GRMMAKRKRBGGTAACTTCCDGRY.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF600KEF_GRMMAKRKRBGGTAACTTCCDGRY.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 ed1400b8e0865204291aaf47efdfefd0 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF600KEF;ENCODE_bigBed_id=ENCFF139VAJ;PMID=34755879;Motif_sequence=GRMMAKRKRBGGTAACTTCCDGRY;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding BMI1 transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR782WRO] [Life stage: Adult] [TFBS]
BMI1 • GM12878 NGFTBAHHTFGNTF • Factorbook34755879 Motif finding GM12878 TFBS Show metadata Download track Track metadata identifier NGFTBAHHTFGNTF data_source Factorbook Download track Download number_of_intervals 5,339 bp_covered 80,085 output_type transcription factor binding sites all genome_build hg38 cell_type GM12878 biosample_type Cell line biosample_term_id EFO:0002784 tissue_category Blood encode_experiment_id ENCSR469WII biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody BMI1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 82,672 downloaded_date 07/10/2024 release_date 11/18/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF160PIE_GTTGCCAWGGMGACS_sorted.bed.gz processed_file_md5 7ebfd88e4b95c6334c6cbd2f32fc7465 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF160PIE_GTTGCCAWGGMGACS_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF160PIE_GTTGCCAWGGMGACS_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF160PIE_GTTGCCAWGGMGACS.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF160PIE_GTTGCCAWGGMGACS.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 cec03d99e3e1e1077c046eaac0920f29 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens GM12878;Original_cell_type=GM12878;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF160PIE;ENCODE_bigBed_id=ENCFF249AMT;PMID=34755879;Motif_sequence=GTTGCCAWGGMGACS;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002784;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name Factorbook GM12878 (repl. 1, 2) Motif finding BMI1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR469WII] [TFBS]
BMI1 • MCF-7 NGFTBBIB5RO4OF • Factorbook34755879 Motif finding MCF-7 TFBS Show metadata Download track Track metadata identifier NGFTBBIB5RO4OF data_source Factorbook Download track Download number_of_intervals 133 bp_covered 2,793 output_type transcription factor binding sites significant genome_build hg38 cell_type MCF-7 biosample_type Cell line biosample_term_id EFO:0001203 tissue_category Breast encode_experiment_id ENCSR966YYJ biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody BMI1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 2,442 downloaded_date 07/10/2024 release_date 05/17/2017 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF846CPP_GGAAGTTACCRCCCCTTTCCA_filtered.bed.gz processed_file_md5 19db3a1fa4877ee405a7d4464ae6de94 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF846CPP_GGAAGTTACCRCCCCTTTCCA_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF846CPP_GGAAGTTACCRCCCCTTTCCA_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF846CPP_GGAAGTTACCRCCCCTTTCCA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF846CPP_GGAAGTTACCRCCCCTTTCCA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 fb18d15690864e16a46a3e2425987ad9 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens MCF-7;Original_cell_type=MCF-7;Lab=Michael Snyder, Stanford;System=exocrine system,integumental system;ENCODE_BED_id=ENCFF846CPP;ENCODE_bigBed_id=ENCFF570JPP;PMID=34755879;Motif_sequence=GGAAGTTACCRCCCCTTTCCA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001203;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook MCF-7 (repl. 1, 2) Motif finding BMI1 transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR966YYJ] [Life stage: Adult] [TFBS]
BMI1 • K562 NGFTBE3MWZPAOJ • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBE3MWZPAOJ data_source Factorbook Download track Download number_of_intervals 88 bp_covered 1,232 output_type transcription factor binding sites significant genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR782WRO biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody BMI1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 1,097 downloaded_date 07/10/2024 release_date 07/07/2014 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF600KEF_GTYGCCATGGCAAC_filtered.bed.gz processed_file_md5 d171256eec62fbbf2467acf5391705dc wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF600KEF_GTYGCCATGGCAAC_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF600KEF_GTYGCCATGGCAAC_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF600KEF_GTYGCCATGGCAAC.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF600KEF_GTYGCCATGGCAAC.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 34b72c7a22e86ed9b85d7c747b49b916 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF600KEF;ENCODE_bigBed_id=ENCFF139VAJ;PMID=34755879;Motif_sequence=GTYGCCATGGCAAC;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding BMI1 transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR782WRO] [Life stage: Adult] [TFBS]
BMI1 • MCF-7 NGFTBEVRCXIPAJ • Factorbook34755879 Motif finding MCF-7 TFBS Show metadata Download track Track metadata identifier NGFTBEVRCXIPAJ data_source Factorbook Download track Download number_of_intervals 8,071 bp_covered 121,065 output_type transcription factor binding sites all genome_build hg38 cell_type MCF-7 biosample_type Cell line biosample_term_id EFO:0001203 tissue_category Breast encode_experiment_id ENCSR966YYJ biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody BMI1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 124,316 downloaded_date 07/10/2024 release_date 05/17/2017 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF846CPP_KGTTGCYAWGGHGAC_sorted.bed.gz processed_file_md5 76f45ed718be202826f79f2fcffd3709 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF846CPP_KGTTGCYAWGGHGAC_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF846CPP_KGTTGCYAWGGHGAC_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF846CPP_KGTTGCYAWGGHGAC.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF846CPP_KGTTGCYAWGGHGAC.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 b73ecd537c0aac417a371a8c9dee3c07 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens MCF-7;Original_cell_type=MCF-7;Lab=Michael Snyder, Stanford;System=exocrine system,integumental system;ENCODE_BED_id=ENCFF846CPP;ENCODE_bigBed_id=ENCFF570JPP;PMID=34755879;Motif_sequence=KGTTGCYAWGGHGAC;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001203;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook MCF-7 (repl. 1, 2) Motif finding BMI1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR966YYJ] [Life stage: Adult] [TFBS]
BMI1 • MCF-7 NGFTBGQMJ6XFLP • Factorbook34755879 Motif finding MCF-7 TFBS Show metadata Download track Track metadata identifier NGFTBGQMJ6XFLP data_source Factorbook Download track Download number_of_intervals 98 bp_covered 2,058 output_type transcription factor binding sites significant genome_build hg38 cell_type MCF-7 biosample_type Cell line biosample_term_id EFO:0001203 tissue_category Breast encode_experiment_id ENCSR966YYJ biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody BMI1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 1,786 downloaded_date 07/10/2024 release_date 05/17/2017 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF846CPP_TAAACTGWCATGGCRCWSKKG_filtered.bed.gz processed_file_md5 4ba4f590f9e2c345c18d28e56dd6da03 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF846CPP_TAAACTGWCATGGCRCWSKKG_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF846CPP_TAAACTGWCATGGCRCWSKKG_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF846CPP_TAAACTGWCATGGCRCWSKKG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF846CPP_TAAACTGWCATGGCRCWSKKG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 f73ba416d5b8a710328bb0cd4a8b1865 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens MCF-7;Original_cell_type=MCF-7;Lab=Michael Snyder, Stanford;System=exocrine system,integumental system;ENCODE_BED_id=ENCFF846CPP;ENCODE_bigBed_id=ENCFF570JPP;PMID=34755879;Motif_sequence=TAAACTGWCATGGCRCWSKKG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001203;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook MCF-7 (repl. 1, 2) Motif finding BMI1 transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR966YYJ] [Life stage: Adult] [TFBS]
BMI1 • MCF-7 NGFTBGS7JLWNGW • Factorbook34755879 Motif finding MCF-7 TFBS Show metadata Download track Track metadata identifier NGFTBGS7JLWNGW data_source Factorbook Download track Download number_of_intervals 667 bp_covered 14,007 output_type transcription factor binding sites all genome_build hg38 cell_type MCF-7 biosample_type Cell line biosample_term_id EFO:0001203 tissue_category Breast encode_experiment_id ENCSR966YYJ biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody BMI1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 13,710 downloaded_date 07/10/2024 release_date 05/17/2017 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF846CPP_TAAACTGWCATGGCRCWSKKG_sorted.bed.gz processed_file_md5 25fad3e6ae6694758f91119186d1e603 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF846CPP_TAAACTGWCATGGCRCWSKKG_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF846CPP_TAAACTGWCATGGCRCWSKKG_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF846CPP_TAAACTGWCATGGCRCWSKKG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF846CPP_TAAACTGWCATGGCRCWSKKG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 f73ba416d5b8a710328bb0cd4a8b1865 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens MCF-7;Original_cell_type=MCF-7;Lab=Michael Snyder, Stanford;System=exocrine system,integumental system;ENCODE_BED_id=ENCFF846CPP;ENCODE_bigBed_id=ENCFF570JPP;PMID=34755879;Motif_sequence=TAAACTGWCATGGCRCWSKKG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001203;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook MCF-7 (repl. 1, 2) Motif finding BMI1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR966YYJ] [Life stage: Adult] [TFBS]
BMI1 • MCF-7 NGFTBJH3XJOU4O • Factorbook34755879 Motif finding MCF-7 TFBS Show metadata Download track Track metadata identifier NGFTBJH3XJOU4O data_source Factorbook Download track Download number_of_intervals 165 bp_covered 3,135 output_type transcription factor binding sites significant genome_build hg38 cell_type MCF-7 biosample_type Cell line biosample_term_id EFO:0001203 tissue_category Breast encode_experiment_id ENCSR966YYJ biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody BMI1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 2,874 downloaded_date 07/10/2024 release_date 05/17/2017 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF846CPP_SYSGTTGCCATGGNRACVS_filtered.bed.gz processed_file_md5 2af2438bcd0fae21b9a671aa5baaeb86 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF846CPP_SYSGTTGCCATGGNRACVS_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF846CPP_SYSGTTGCCATGGNRACVS_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF846CPP_SYSGTTGCCATGGNRACVS.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF846CPP_SYSGTTGCCATGGNRACVS.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 02d403fa9614b69b22d10f9b34fdeee3 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens MCF-7;Original_cell_type=MCF-7;Lab=Michael Snyder, Stanford;System=exocrine system,integumental system;ENCODE_BED_id=ENCFF846CPP;ENCODE_bigBed_id=ENCFF570JPP;PMID=34755879;Motif_sequence=SYSGTTGCCATGGNRACVS;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001203;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook MCF-7 (repl. 1, 2) Motif finding BMI1 transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR966YYJ] [Life stage: Adult] [TFBS]
BMI1 • K562 NGFTBKTUGUNL52 • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBKTUGUNL52 data_source Factorbook Download track Download number_of_intervals 432 bp_covered 10,368 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR782WRO biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody BMI1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 9,747 downloaded_date 07/10/2024 release_date 07/07/2014 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF600KEF_GRMMAKRKRBGGTAACTTCCDGRY_sorted.bed.gz processed_file_md5 8604bebff1ee0a76eccd4ac81063bff5 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF600KEF_GRMMAKRKRBGGTAACTTCCDGRY_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF600KEF_GRMMAKRKRBGGTAACTTCCDGRY_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF600KEF_GRMMAKRKRBGGTAACTTCCDGRY.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF600KEF_GRMMAKRKRBGGTAACTTCCDGRY.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 ed1400b8e0865204291aaf47efdfefd0 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF600KEF;ENCODE_bigBed_id=ENCFF139VAJ;PMID=34755879;Motif_sequence=GRMMAKRKRBGGTAACTTCCDGRY;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding BMI1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR782WRO] [Life stage: Adult] [TFBS]
BMI1 • MCF-7 NGFTBLCV27SEFN • Factorbook34755879 Motif finding MCF-7 TFBS Show metadata Download track Track metadata identifier NGFTBLCV27SEFN data_source Factorbook Download track Download number_of_intervals 1,474 bp_covered 30,954 output_type transcription factor binding sites all genome_build hg38 cell_type MCF-7 biosample_type Cell line biosample_term_id EFO:0001203 tissue_category Breast encode_experiment_id ENCSR966YYJ biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody BMI1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 29,833 downloaded_date 07/10/2024 release_date 05/17/2017 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF846CPP_GGAAGTTACCRCCCCTTTCCA_sorted.bed.gz processed_file_md5 55d0cbfe41d57d7b65dc4905ac559323 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF846CPP_GGAAGTTACCRCCCCTTTCCA_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF846CPP_GGAAGTTACCRCCCCTTTCCA_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF846CPP_GGAAGTTACCRCCCCTTTCCA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF846CPP_GGAAGTTACCRCCCCTTTCCA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 fb18d15690864e16a46a3e2425987ad9 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens MCF-7;Original_cell_type=MCF-7;Lab=Michael Snyder, Stanford;System=exocrine system,integumental system;ENCODE_BED_id=ENCFF846CPP;ENCODE_bigBed_id=ENCFF570JPP;PMID=34755879;Motif_sequence=GGAAGTTACCRCCCCTTTCCA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001203;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook MCF-7 (repl. 1, 2) Motif finding BMI1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR966YYJ] [Life stage: Adult] [TFBS]
BMI1 • K562 NGFTBMKF3BX2BM • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBMKF3BX2BM data_source Factorbook Download track Download number_of_intervals 127 bp_covered 3,810 output_type transcription factor binding sites significant genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR782WRO biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody BMI1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 2,851 downloaded_date 07/10/2024 release_date 07/07/2014 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF600KEF_ACACTCCCACCAGYGCCATGACAGTTTACM_filtered.bed.gz processed_file_md5 3bfd80c496b4bf446f031a3d8d60f06e wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF600KEF_ACACTCCCACCAGYGCCATGACAGTTTACM_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF600KEF_ACACTCCCACCAGYGCCATGACAGTTTACM_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF600KEF_ACACTCCCACCAGYGCCATGACAGTTTACM.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF600KEF_ACACTCCCACCAGYGCCATGACAGTTTACM.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 35046a12c5feb55e8d89a715ccfdd29d data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF600KEF;ENCODE_bigBed_id=ENCFF139VAJ;PMID=34755879;Motif_sequence=ACACTCCCACCAGYGCCATGACAGTTTACM;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding BMI1 transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR782WRO] [Life stage: Adult] [TFBS]
BMI1 • MCF-7 NGFTBOEZSC4KEB • Factorbook34755879 Motif finding MCF-7 TFBS Show metadata Download track Track metadata identifier NGFTBOEZSC4KEB data_source Factorbook Download track Download number_of_intervals 10,833 bp_covered 205,827 output_type transcription factor binding sites all genome_build hg38 cell_type MCF-7 biosample_type Cell line biosample_term_id EFO:0001203 tissue_category Breast encode_experiment_id ENCSR966YYJ biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody BMI1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 193,117 downloaded_date 07/10/2024 release_date 05/17/2017 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF846CPP_SYSGTTGCCATGGNRACVS_sorted.bed.gz processed_file_md5 b35953c5a49a48959e3b793c323ce1f0 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF846CPP_SYSGTTGCCATGGNRACVS_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF846CPP_SYSGTTGCCATGGNRACVS_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF846CPP_SYSGTTGCCATGGNRACVS.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF846CPP_SYSGTTGCCATGGNRACVS.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 02d403fa9614b69b22d10f9b34fdeee3 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens MCF-7;Original_cell_type=MCF-7;Lab=Michael Snyder, Stanford;System=exocrine system,integumental system;ENCODE_BED_id=ENCFF846CPP;ENCODE_bigBed_id=ENCFF570JPP;PMID=34755879;Motif_sequence=SYSGTTGCCATGGNRACVS;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001203;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook MCF-7 (repl. 1, 2) Motif finding BMI1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR966YYJ] [Life stage: Adult] [TFBS]
BMI1 • GM12878 NGFTBTOTP37MEX • Factorbook34755879 Motif finding GM12878 TFBS Show metadata Download track Track metadata identifier NGFTBTOTP37MEX data_source Factorbook Download track Download number_of_intervals 6,598 bp_covered 105,568 output_type transcription factor binding sites all genome_build hg38 cell_type GM12878 biosample_type Cell line biosample_term_id EFO:0002784 tissue_category Blood encode_experiment_id ENCSR469WII biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody BMI1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 106,219 downloaded_date 07/10/2024 release_date 11/18/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF160PIE_CBGTTGCCATGGHRAC_sorted.bed.gz processed_file_md5 c3a564e5e2a2d914457fff4c657b6e05 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF160PIE_CBGTTGCCATGGHRAC_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF160PIE_CBGTTGCCATGGHRAC_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF160PIE_CBGTTGCCATGGHRAC.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF160PIE_CBGTTGCCATGGHRAC.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 cef19d77599345852f9da9316e315861 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens GM12878;Original_cell_type=GM12878;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF160PIE;ENCODE_bigBed_id=ENCFF249AMT;PMID=34755879;Motif_sequence=CBGTTGCCATGGHRAC;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002784;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name Factorbook GM12878 (repl. 1, 2) Motif finding BMI1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR469WII] [TFBS]
BMI1 • GM12878 NGFTBUHP5DHHWY • Factorbook34755879 Motif finding GM12878 TFBS Show metadata Download track Track metadata identifier NGFTBUHP5DHHWY data_source Factorbook Download track Download number_of_intervals 2,133 bp_covered 27,729 output_type transcription factor binding sites all genome_build hg38 cell_type GM12878 biosample_type Cell line biosample_term_id EFO:0002784 tissue_category Blood encode_experiment_id ENCSR469WII biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody BMI1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 31,385 downloaded_date 07/10/2024 release_date 11/18/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF160PIE_GTTGCTAGGMRAC_sorted.bed.gz processed_file_md5 d931b0fe435339ed5e1d4776a84789d2 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF160PIE_GTTGCTAGGMRAC_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF160PIE_GTTGCTAGGMRAC_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF160PIE_GTTGCTAGGMRAC.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF160PIE_GTTGCTAGGMRAC.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 f2cd02dea45d93cb8f529c000b04d922 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens GM12878;Original_cell_type=GM12878;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF160PIE;ENCODE_bigBed_id=ENCFF249AMT;PMID=34755879;Motif_sequence=GTTGCTAGGMRAC;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002784;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name Factorbook GM12878 (repl. 1, 2) Motif finding BMI1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR469WII] [TFBS]
BMI1 • K562 NGFTBXCIZFJ4LW • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBXCIZFJ4LW data_source Factorbook Download track Download number_of_intervals 322 bp_covered 9,660 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR782WRO biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody BMI1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 7,971 downloaded_date 07/10/2024 release_date 07/07/2014 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF600KEF_ACACTCCCACCAGYGCCATGACAGTTTACM_sorted.bed.gz processed_file_md5 8e0911c12c68408dcca81473ab326d54 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF600KEF_ACACTCCCACCAGYGCCATGACAGTTTACM_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF600KEF_ACACTCCCACCAGYGCCATGACAGTTTACM_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF600KEF_ACACTCCCACCAGYGCCATGACAGTTTACM.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF600KEF_ACACTCCCACCAGYGCCATGACAGTTTACM.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 35046a12c5feb55e8d89a715ccfdd29d data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF600KEF;ENCODE_bigBed_id=ENCFF139VAJ;PMID=34755879;Motif_sequence=ACACTCCCACCAGYGCCATGACAGTTTACM;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding BMI1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR782WRO] [Life stage: Adult] [TFBS]
BMI1 • K562 NGFTBZLCNI22WP • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBZLCNI22WP data_source Factorbook Download track Download number_of_intervals 2,620 bp_covered 36,680 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR782WRO biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody BMI1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 38,935 downloaded_date 07/10/2024 release_date 07/07/2014 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF600KEF_GTYGCCATGGCAAC_sorted.bed.gz processed_file_md5 8852a24d7caf87d62c19bcec977a1787 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF600KEF_GTYGCCATGGCAAC_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF600KEF_GTYGCCATGGCAAC_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF600KEF_GTYGCCATGGCAAC.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF600KEF_GTYGCCATGGCAAC.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 34b72c7a22e86ed9b85d7c747b49b916 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF600KEF;ENCODE_bigBed_id=ENCFF139VAJ;PMID=34755879;Motif_sequence=GTYGCCATGGCAAC;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding BMI1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR782WRO] [Life stage: Adult] [TFBS]
Reference annotation (BMYB) NGHOMG33MKQR7V • HOMER20513432 Motif finding Reference annotation (BMYB) TFBS Show metadata Download track Track metadata identifier NGHOMG33MKQR7V data_source HOMER Download track Download number_of_intervals 2,518,292 bp_covered 25,182,920 output_type transcription factor binding sites genome_build hg38 cell_type Not applicable biosample_type Not applicable biosample_term_id Not applicable tissue_category Not applicable encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody BMYB assay Motif finding file_format bed bed6+5 Homer file_size 25,934,074 downloaded_date 08/12/2023 release_date 10/19/2020 date_added_to_filer 12/19/2025 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Homer/bed11/hg38/BMYB_HTH.hg38.processed.bed.gz processed_file_md5 386cb5b263dc392b4baf6b80fb7e11af wget_command wget https://filer2.niagads.org/Annotationtracks/Homer/bed11/hg38/BMYB_HTH.hg38.processed.bed.gz -P GADB/Annotationtracks/Homer/bed11/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Homer/bed11/hg38/BMYB_HTH.hg38.processed.bed.gz.tbi -P GADB/Annotationtracks/Homer/bed11/hg38/ link_out_url https://homer.ucsd.edu/homer/ raw_file_url https://homer.ucsd.edu/homer/data/motifs/homer.KnownMotifs.hg38.191020.bed.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/Homer/homer.KnownMotifs.hg38.191020.bed.gz -P GADB/Annotationtracks/Downloads/Homer/ raw_file_md5 7f59c5d4bbf50fea7476a173961ea174 data_category TFBS [Transcription Factor Binding Site] Genomic feature type HOMER transcription factor binding sites track_description version=191020;TF_name=BMYB;DNA_binding_domain=HTH;Cell_type=Hela;Assay=ChIP-Seq;Origin=GSE27030;schema=BED6+5;dataSource_pubmed_id=20513432;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/HOMER.html;original_biosample_term_id=Not applicable;is_hg38_lifted=no system_category Not applicable life_stage Not applicable track_name HOMER Motif finding BMYB transcription factor binding sites (bed6+5 Homer) [TFBS]
BNC2 • SK-N-SH NGENC5SBISHNWD • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq SK-N-SH TF Show metadata Download track Track metadata identifier NGENC5SBISHNWD data_source ENCODE Download track Download number_of_intervals 13,850 bp_covered 4,925,408 output_type IDR thresholded peaks genome_build hg38 cell_type SK-N-SH biosample_type Cell line biosample_term_id EFO:0003072 tissue_category Brain encode_experiment_id ENCSR754GYI biological_replicate 1 technical_replicate 1_1 antibody BNC2 assay TF ChIP-seq file_format bed narrowPeak file_size 268,629 downloaded_date 06/12/2022 release_date 08/21/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF635ILG.bed.gz processed_file_md5 330a1ab88407542755e7d336ee672c69 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF635ILG.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF635ILG.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF635ILG/@@download/ENCFF635ILG.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF635ILG.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 796c4930d840bd2375ab9251bc51685b data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens SK-N-SH genetically modified (insertion) using CRISPR targeting H. sapiens BNC2 treated with 6 _M all-trans-retinoic acid for 48 hours;Lab=Michael Snyder, Stanford;ENCODE_internal_tags=RegulomeDB_2_2,RegulomeDB_2_1;Life_stage_age=child 4 years;Reference=NR;External_resources=GEO:GSE175111;Project=ENCODE;Award=UM1HG009442;Experiment_date_released=2020-08-28,2020-08-03,2020-06-30;Submitted_track_name=rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=SK-N-SH;ENCODE_cell_slims=neuroblastoma cell,cancer cell;ENCODE_system_slims=central nervous system;ENCODE_biosample_term_synonyms=SKNSH;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=[Method:CRISPR|Category:insertion];schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0003072;is_hg38_lifted=no system_category Nervous life_stage Child track_name ENCODE SK-N-SH (repl. 1) TF ChIP-seq BNC2 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR754GYI] [Life stage: Child] [TF ChIP-seq peaks]
BNC2 • SK-N-SH NGENC77P6TSJHQ • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq SK-N-SH TF Show metadata Download track Track metadata identifier NGENC77P6TSJHQ data_source ENCODE Download track Download number_of_intervals 17,164 bp_covered 7,185,147 output_type conservative IDR thresholded peaks genome_build hg38 cell_type SK-N-SH biosample_type Cell line biosample_term_id EFO:0003072 tissue_category Brain encode_experiment_id ENCSR754GYI biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody BNC2 assay TF ChIP-seq file_format bed narrowPeak file_size 342,808 downloaded_date 06/12/2022 release_date 08/21/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF672RFZ.bed.gz processed_file_md5 05f1835c3aca5a21da2103f615930099 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF672RFZ.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF672RFZ.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF672RFZ/@@download/ENCFF672RFZ.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF672RFZ.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 a07dd0840b3cfbf63d737c8a66ab29da data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq conservative IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens SK-N-SH genetically modified (insertion) using CRISPR targeting H. sapiens BNC2 treated with 6 _M all-trans-retinoic acid for 48 hours;Lab=Michael Snyder, Stanford;ENCODE_internal_tags=RegulomeDB_2_2,RegulomeDB_2_1;Life_stage_age=child 4 years;Reference=NR;External_resources=GEO:GSE175111;Project=ENCODE;Award=UM1HG009442;Experiment_date_released=2020-08-28,2020-08-03,2020-06-30;Submitted_track_name=rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=SK-N-SH;ENCODE_cell_slims=neuroblastoma cell,cancer cell;ENCODE_system_slims=central nervous system;ENCODE_biosample_term_synonyms=SKNSH;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=[Method:CRISPR|Category:insertion];schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0003072;is_hg38_lifted=no system_category Nervous life_stage Child track_name ENCODE SK-N-SH (repl. 1, 2) TF ChIP-seq BNC2 conservative IDR thresholded peaks (narrowPeak) [Experiment: ENCSR754GYI] [Life stage: Child] [TF ChIP-seq peaks]
BNC2 • SK-N-SH NGENCD5M4VRFCJ • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq SK-N-SH TF Show metadata Download track Track metadata identifier NGENCD5M4VRFCJ data_source ENCODE Download track Download number_of_intervals 20,629 bp_covered 8,652,721 output_type IDR thresholded peaks genome_build hg38 cell_type SK-N-SH biosample_type Cell line biosample_term_id EFO:0003072 tissue_category Brain encode_experiment_id ENCSR754GYI biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody BNC2 assay TF ChIP-seq file_format bed narrowPeak file_size 408,978 downloaded_date 06/12/2022 release_date 08/21/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF174EMC.bed.gz processed_file_md5 02b36ab86f5528712effbdd4a1e6d187 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF174EMC.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF174EMC.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF174EMC/@@download/ENCFF174EMC.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF174EMC.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 04a074c01ff31105c97fb1887bb7548b data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens SK-N-SH genetically modified (insertion) using CRISPR targeting H. sapiens BNC2 treated with 6 _M all-trans-retinoic acid for 48 hours;Lab=Michael Snyder, Stanford;ENCODE_internal_tags=RegulomeDB_2_2,RegulomeDB_2_1;Life_stage_age=child 4 years;Reference=NR;External_resources=GEO:GSE175111;Project=ENCODE;Award=UM1HG009442;Experiment_date_released=2020-08-28,2020-08-03,2020-06-30;Submitted_track_name=pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=SK-N-SH;ENCODE_cell_slims=neuroblastoma cell,cancer cell;ENCODE_system_slims=central nervous system;ENCODE_biosample_term_synonyms=SKNSH;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=[Method:CRISPR|Category:insertion];schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0003072;is_hg38_lifted=no system_category Nervous life_stage Child track_name ENCODE SK-N-SH (repl. 1, 2) TF ChIP-seq BNC2 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR754GYI] [Life stage: Child] [TF ChIP-seq peaks]