H2BK5ac • H9 NGRMPM56K4FSZY • ROADMAP [lifted]25693563 ChIP-seq H9 Histone Show metadata Download track Track metadata identifier NGRMPM56K4FSZY data_source ROADMAP-lifted Download track Download number_of_intervals 19,761 bp_covered 2,939,081 output_type peaks genome_build hg38 cell_type H9 biosample_type Stem cell biosample_term_id EFO:0003045 tissue_category Embryo encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H2BK5ac assay ChIP-seq file_format bed narrowPeak-lifted file_size 558,666 downloaded_date 08/15/2018 release_date 11/30/2014 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/UCSD.H9.H2BK5ac.YL244.narrowPeak.lifted.bed.gz processed_file_md5 ce0aa07a4723c6481c20ce80531dc0c4 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/UCSD.H9.H2BK5ac.YL244.narrowPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/UCSD.H9.H2BK5ac.YL244.narrowPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/narrowPeak/UCSD.H9.H2BK5ac.YL244.narrowPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/narrowpeak/UCSD.H9.H2BK5ac.YL244.narrowPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/narrowpeak/ raw_file_md5 376f2553a095bc58848dfb8bba3cc568 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H2BK5ac peaks track_description version=2015;Original_cell_type=H9;Donor=YL244;schema=BED3+10;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP.html;original_biosample_term_id=EFO:0003045;is_hg38_lifted=yes system_category Embryo life_stage Embryonic track_name ROADMAP-lifted H9 ChIP-seq H2BK5ac-histone-mark peaks (narrowPeak-lifted) [Life stage: Embryonic] [Histone ChIP-seq peaks]
H2BK5ac • IMR-90 NGRMPMHSVM6Z5I • ROADMAP [lifted]25693563 ChIP-seq IMR-90 Histone Show metadata Download track Track metadata identifier NGRMPMHSVM6Z5I data_source ROADMAP-lifted Download track Download number_of_intervals 240,972 bp_covered 213,567,003 output_type peaks genome_build hg38 cell_type IMR-90 biosample_type Cell line biosample_term_id EFO:0001196 tissue_category Lung encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H2BK5ac assay ChIP-seq file_format bed gappedPeak-lifted file_size 11,476,103 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/28/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.IMR90.H2BK5ac.YL281.gappedPeak.lifted.bed.gz processed_file_md5 589208c46474e4a9cba78663f7513d07 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.IMR90.H2BK5ac.YL281.gappedPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.IMR90.H2BK5ac.YL281.gappedPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/gappedPeak/UCSD.IMR90.H2BK5ac.YL281.gappedPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/gappedpeak/UCSD.IMR90.H2BK5ac.YL281.gappedPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/gappedpeak/ raw_file_md5 dacc28e0de8bd7b1feb4b0d8b986589f data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H2BK5ac peaks track_description version=2015;Original_cell_type=IMR 90;Donor=YL281;schema=BED3+15;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP.html;original_biosample_term_id=EFO:0001196;is_hg38_lifted=yes system_category Respiratory life_stage Unknown track_name ROADMAP-lifted IMR-90 ChIP-seq H2BK5ac-histone-mark peaks (gappedPeak-lifted) [Histone ChIP-seq peaks]
H2BK5ac • H1-hESC NGRMPNUSB2U6L2 • ROADMAP [lifted]25693563 ChIP-seq H1-hESC Histone Show metadata Download track Track metadata identifier NGRMPNUSB2U6L2 data_source ROADMAP-lifted Download track Download number_of_intervals 280,153 bp_covered 40,566,889 output_type peaks genome_build hg38 cell_type H1-hESC biosample_type Stem cell biosample_term_id EFO:0003042 tissue_category Embryo encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H2BK5ac assay ChIP-seq file_format bed narrowPeak-lifted file_size 7,319,341 downloaded_date 08/15/2018 release_date 11/30/2014 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/UCSD.H1.H2BK5ac.YL98.narrowPeak.lifted.bed.gz processed_file_md5 03af295d891b8e2a338634012397053f wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/UCSD.H1.H2BK5ac.YL98.narrowPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/UCSD.H1.H2BK5ac.YL98.narrowPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/narrowPeak/UCSD.H1.H2BK5ac.YL98.narrowPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/narrowpeak/UCSD.H1.H2BK5ac.YL98.narrowPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/narrowpeak/ raw_file_md5 e562cde9fec560ac3ba27d849fda82ce data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H2BK5ac peaks track_description version=2015;Original_cell_type=H1;Donor=YL98;schema=BED3+10;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP.html;original_biosample_term_id=EFO:0003042;is_hg38_lifted=yes system_category Embryo life_stage Embryonic track_name ROADMAP-lifted H1-hESC ChIP-seq H2BK5ac-histone-mark peaks (narrowPeak-lifted) [Life stage: Embryonic] [Histone ChIP-seq peaks]
H2BK5ac • Trophoblast NGRMPOIXA53ZWW • ROADMAP [lifted]25693563 ChIP-seq Trophoblast Histone Show metadata Download track Track metadata identifier NGRMPOIXA53ZWW data_source ROADMAP-lifted Download track Download number_of_intervals 641,727 bp_covered 469,941,790 output_type peaks genome_build hg38 cell_type Trophoblast biosample_type In vitro differentiated cells biosample_term_id UBERON:0000088 tissue_category Embryo encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H2BK5ac assay ChIP-seq file_format bed broadPeak-lifted file_size 20,694,149 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/27/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H2BK5ac.AY225.broadPeak.lifted.bed.gz processed_file_md5 4968525850218112f296ff1a843d34ad wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H2BK5ac.AY225.broadPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H2BK5ac.AY225.broadPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/broadPeak/UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H2BK5ac.AY225.broadPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/broadpeak/UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H2BK5ac.AY225.broadPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/broadpeak/ raw_file_md5 2f66b6ff6d43b9c71296306b78f1ed39 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H2BK5ac peaks track_description version=2015;Original_cell_type=H1 BMP4 Derived Trophoblast Cultured Cells;Donor=AY225;schema=BED3+9;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP.html;original_biosample_term_id=NTR:0000856;is_hg38_lifted=yes system_category Embryo life_stage Embryonic track_name ROADMAP-lifted Trophoblast ChIP-seq H2BK5ac-histone-mark peaks (broadPeak-lifted) [Life stage: Embryonic] [Histone ChIP-seq peaks]
H2BK5ac • Mesenchymal stem cell NGRMPOQCDBLHJD • ROADMAP [lifted]25693563 ChIP-seq Mesenchymal stem cell Histone Show metadata Download track Track metadata identifier NGRMPOQCDBLHJD data_source ROADMAP-lifted Download track Download number_of_intervals 162,004 bp_covered 28,450,185 output_type peaks genome_build hg38 cell_type Mesenchymal stem cell biosample_type Stem cell biosample_term_id CL:0000134 tissue_category Connective Tissue encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H2BK5ac assay ChIP-seq file_format bed narrowPeak-lifted file_size 4,471,916 downloaded_date 08/15/2018 release_date 11/30/2014 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/UCSD.H1_Derived_Mesenchymal_Stem_Cells.H2BK5ac.SK517.narrowPeak.lifted.bed.gz processed_file_md5 8a13fc9c1884cb05120fbe340715b1db wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/UCSD.H1_Derived_Mesenchymal_Stem_Cells.H2BK5ac.SK517.narrowPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/UCSD.H1_Derived_Mesenchymal_Stem_Cells.H2BK5ac.SK517.narrowPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/narrowPeak/UCSD.H1_Derived_Mesenchymal_Stem_Cells.H2BK5ac.SK517.narrowPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/narrowpeak/UCSD.H1_Derived_Mesenchymal_Stem_Cells.H2BK5ac.SK517.narrowPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/narrowpeak/ raw_file_md5 f41e3ab1f1372f5e5160985de8d334a8 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H2BK5ac peaks track_description version=2015;Original_cell_type=H1 Derived Mesenchymal Stem Cells;Donor=SK517;schema=BED3+10;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Skeletal life_stage Embryonic track_name ROADMAP-lifted Mesenchymal stem cell ChIP-seq H2BK5ac-histone-mark peaks (narrowPeak-lifted) [Life stage: Embryonic] [Histone ChIP-seq peaks]
H2BK5ac • IMR-90 NGRMPQIG4XOYXX • ROADMAP [lifted]25693563 ChIP-seq IMR-90 Histone Show metadata Download track Track metadata identifier NGRMPQIG4XOYXX data_source ROADMAP-lifted Download track Download number_of_intervals 61,562 bp_covered 199,977,678 output_type peaks genome_build hg38 cell_type IMR-90 biosample_type Cell line biosample_term_id EFO:0001196 tissue_category Lung encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H2BK5ac assay ChIP-seq file_format bed gappedPeak-lifted file_size 3,661,277 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/28/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.IMR90.H2BK5ac.SK10.gappedPeak.lifted.bed.gz processed_file_md5 9de26a81123dcbb8ba8a799fc3e8fb6d wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.IMR90.H2BK5ac.SK10.gappedPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.IMR90.H2BK5ac.SK10.gappedPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/gappedPeak/UCSD.IMR90.H2BK5ac.SK10.gappedPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/gappedpeak/UCSD.IMR90.H2BK5ac.SK10.gappedPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/gappedpeak/ raw_file_md5 1648e78911daae1919827c09711ce84b data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H2BK5ac peaks track_description version=2015;Original_cell_type=IMR 90;Donor=SK10;schema=BED3+15;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP.html;original_biosample_term_id=EFO:0001196;is_hg38_lifted=yes system_category Respiratory life_stage Unknown track_name ROADMAP-lifted IMR-90 ChIP-seq H2BK5ac-histone-mark peaks (gappedPeak-lifted) [Histone ChIP-seq peaks]
H2BK5ac • Neuronal progenitor cell NGRMPQPEPDYA7H • ROADMAP [lifted]25693563 ChIP-seq Neuronal progenitor cell Histone Show metadata Download track Track metadata identifier NGRMPQPEPDYA7H data_source ROADMAP-lifted Download track Download number_of_intervals 299,464 bp_covered 46,677,374 output_type peaks genome_build hg38 cell_type Neuronal progenitor cell biosample_type In vitro differentiated cells biosample_term_id CL:0000047 tissue_category Stem Cell encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H2BK5ac assay ChIP-seq file_format bed narrowPeak-lifted file_size 8,673,590 downloaded_date 08/15/2018 release_date 11/30/2014 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H2BK5ac.CY10.narrowPeak.lifted.bed.gz processed_file_md5 9a697da50727aaabc2a64b41e1c82034 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H2BK5ac.CY10.narrowPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H2BK5ac.CY10.narrowPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/narrowPeak/UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H2BK5ac.CY10.narrowPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/narrowpeak/UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H2BK5ac.CY10.narrowPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/narrowpeak/ raw_file_md5 0450cafb4728d8c10ce7e642c943da01 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H2BK5ac peaks track_description version=2015;Original_cell_type=H1 Derived Neuronal Progenitor Cultured Cells;Donor=CY10;schema=BED3+10;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Stem Cell life_stage Embryonic track_name ROADMAP-lifted Neuronal progenitor cell ChIP-seq H2BK5ac-histone-mark peaks (narrowPeak-lifted) [Life stage: Embryonic] [Histone ChIP-seq peaks]
H2BK5ac • Trophoblast NGRMPQRXDDAMPI • ROADMAP [lifted]25693563 ChIP-seq Trophoblast Histone Show metadata Download track Track metadata identifier NGRMPQRXDDAMPI data_source ROADMAP-lifted Download track Download number_of_intervals 607,629 bp_covered 441,563,309 output_type peaks genome_build hg38 cell_type Trophoblast biosample_type In vitro differentiated cells biosample_term_id UBERON:0000088 tissue_category Embryo encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H2BK5ac assay ChIP-seq file_format bed broadPeak-lifted file_size 19,808,301 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/27/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H2BK5ac.AY73.broadPeak.lifted.bed.gz processed_file_md5 df9e2167df3e81f01a423e3e7efda8cf wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H2BK5ac.AY73.broadPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H2BK5ac.AY73.broadPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/broadPeak/UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H2BK5ac.AY73.broadPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/broadpeak/UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H2BK5ac.AY73.broadPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/broadpeak/ raw_file_md5 cb26d838713ecd8acfa59bcc3e6f843c data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H2BK5ac peaks track_description version=2015;Original_cell_type=H1 BMP4 Derived Trophoblast Cultured Cells;Donor=AY73;schema=BED3+9;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP.html;original_biosample_term_id=NTR:0000856;is_hg38_lifted=yes system_category Embryo life_stage Embryonic track_name ROADMAP-lifted Trophoblast ChIP-seq H2BK5ac-histone-mark peaks (broadPeak-lifted) [Life stage: Embryonic] [Histone ChIP-seq peaks]
H2BK5ac • Neuronal progenitor cell NGRMPRLZAZFJOS • ROADMAP [lifted]25693563 ChIP-seq Neuronal progenitor cell Histone Show metadata Download track Track metadata identifier NGRMPRLZAZFJOS data_source ROADMAP-lifted Download track Download number_of_intervals 1,087,307 bp_covered 728,727,141 output_type peaks genome_build hg38 cell_type Neuronal progenitor cell biosample_type In vitro differentiated cells biosample_term_id CL:0000047 tissue_category Stem Cell encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H2BK5ac assay ChIP-seq file_format bed broadPeak-lifted file_size 35,445,062 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/27/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H2BK5ac.CY10.broadPeak.lifted.bed.gz processed_file_md5 1be707303922a61bff425c9a77295f6d wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H2BK5ac.CY10.broadPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H2BK5ac.CY10.broadPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/broadPeak/UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H2BK5ac.CY10.broadPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/broadpeak/UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H2BK5ac.CY10.broadPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/broadpeak/ raw_file_md5 a409028e309aa5a4b11c2a467c66d8ea data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H2BK5ac peaks track_description version=2015;Original_cell_type=H1 Derived Neuronal Progenitor Cultured Cells;Donor=CY10;schema=BED3+9;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Stem Cell life_stage Embryonic track_name ROADMAP-lifted Neuronal progenitor cell ChIP-seq H2BK5ac-histone-mark peaks (broadPeak-lifted) [Life stage: Embryonic] [Histone ChIP-seq peaks]
H2BK5ac • Mesendoderm NGRMPRO34U3LM3 • ROADMAP [lifted]25693563 ChIP-seq Mesendoderm Histone Show metadata Download track Track metadata identifier NGRMPRO34U3LM3 data_source ROADMAP-lifted Download track Download number_of_intervals 660,536 bp_covered 582,290,409 output_type peaks genome_build hg38 cell_type Mesendoderm biosample_type In vitro differentiated cells biosample_term_id BTO:0003953 tissue_category Embryo encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H2BK5ac assay ChIP-seq file_format bed broadPeak-lifted file_size 21,819,022 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/27/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.H2BK5ac.AK171.broadPeak.lifted.bed.gz processed_file_md5 606bb02713c0d90b85016725c0752cee wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.H2BK5ac.AK171.broadPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.H2BK5ac.AK171.broadPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/broadPeak/UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.H2BK5ac.AK171.broadPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/broadpeak/UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.H2BK5ac.AK171.broadPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/broadpeak/ raw_file_md5 e34e40459079ddac6bdd0802381d097a data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H2BK5ac peaks track_description version=2015;Original_cell_type=H1 BMP4 Derived Mesendoderm Cultured Cells;Donor=AK171;schema=BED3+9;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP.html;original_biosample_term_id=NTR:0000856;is_hg38_lifted=yes system_category Embryo life_stage Embryonic track_name ROADMAP-lifted Mesendoderm ChIP-seq H2BK5ac-histone-mark peaks (broadPeak-lifted) [Life stage: Embryonic] [Histone ChIP-seq peaks]
H2BK5ac • H1-hESC NGRMPS54I3TUVD • ROADMAP [lifted]25693563 ChIP-seq H1-hESC Histone Show metadata Download track Track metadata identifier NGRMPS54I3TUVD data_source ROADMAP-lifted Download track Download number_of_intervals 1,474,399 bp_covered 986,954,996 output_type peaks genome_build hg38 cell_type H1-hESC biosample_type Stem cell biosample_term_id EFO:0003042 tissue_category Embryo encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H2BK5ac assay ChIP-seq file_format bed broadPeak-lifted file_size 45,569,392 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/27/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/UCSD.H1.H2BK5ac.YL98.broadPeak.lifted.bed.gz processed_file_md5 c7c81b7c677a11a7142f95bcd2a61a7e wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/UCSD.H1.H2BK5ac.YL98.broadPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/UCSD.H1.H2BK5ac.YL98.broadPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/broadPeak/UCSD.H1.H2BK5ac.YL98.broadPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/broadpeak/UCSD.H1.H2BK5ac.YL98.broadPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/broadpeak/ raw_file_md5 dbfd0aac9f1d527dc6b58769a34377d9 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H2BK5ac peaks track_description version=2015;Original_cell_type=H1;Donor=YL98;schema=BED3+9;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP.html;original_biosample_term_id=EFO:0003042;is_hg38_lifted=yes system_category Embryo life_stage Embryonic track_name ROADMAP-lifted H1-hESC ChIP-seq H2BK5ac-histone-mark peaks (broadPeak-lifted) [Life stage: Embryonic] [Histone ChIP-seq peaks]
H2BK5ac • Trophoblast NGRMPSDIR5FJVT • ROADMAP [lifted]25693563 ChIP-seq Trophoblast Histone Show metadata Download track Track metadata identifier NGRMPSDIR5FJVT data_source ROADMAP-lifted Download track Download number_of_intervals 100,876 bp_covered 26,073,352 output_type peaks genome_build hg38 cell_type Trophoblast biosample_type In vitro differentiated cells biosample_term_id UBERON:0000088 tissue_category Embryo encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H2BK5ac assay ChIP-seq file_format bed narrowPeak-lifted file_size 3,053,358 downloaded_date 08/15/2018 release_date 11/30/2014 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H2BK5ac.AY73.narrowPeak.lifted.bed.gz processed_file_md5 3ca1597eff8cb5c31cceec201e87aeaa wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H2BK5ac.AY73.narrowPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H2BK5ac.AY73.narrowPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/narrowPeak/UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H2BK5ac.AY73.narrowPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/narrowpeak/UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H2BK5ac.AY73.narrowPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/narrowpeak/ raw_file_md5 f49bc53f9d43b927e47f6135ac28c043 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H2BK5ac peaks track_description version=2015;Original_cell_type=H1 BMP4 Derived Trophoblast Cultured Cells;Donor=AY73;schema=BED3+10;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP.html;original_biosample_term_id=NTR:0000856;is_hg38_lifted=yes system_category Embryo life_stage Embryonic track_name ROADMAP-lifted Trophoblast ChIP-seq H2BK5ac-histone-mark peaks (narrowPeak-lifted) [Life stage: Embryonic] [Histone ChIP-seq peaks]
H2BK5ac • Mesendoderm NGRMPWYH6FLH4B • ROADMAP [lifted]25693563 ChIP-seq Mesendoderm Histone Show metadata Download track Track metadata identifier NGRMPWYH6FLH4B data_source ROADMAP-lifted Download track Download number_of_intervals 213,436 bp_covered 57,937,940 output_type peaks genome_build hg38 cell_type Mesendoderm biosample_type In vitro differentiated cells biosample_term_id BTO:0003953 tissue_category Embryo encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H2BK5ac assay ChIP-seq file_format bed narrowPeak-lifted file_size 6,737,962 downloaded_date 08/15/2018 release_date 11/30/2014 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.H2BK5ac.AK171.narrowPeak.lifted.bed.gz processed_file_md5 3cee2c3287f1b2d7dc75fa721c5b4aec wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.H2BK5ac.AK171.narrowPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.H2BK5ac.AK171.narrowPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/narrowPeak/UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.H2BK5ac.AK171.narrowPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/narrowpeak/UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.H2BK5ac.AK171.narrowPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/narrowpeak/ raw_file_md5 27c115245fa0a1c0a7cc52ea8eb5a58b data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H2BK5ac peaks track_description version=2015;Original_cell_type=H1 BMP4 Derived Mesendoderm Cultured Cells;Donor=AK171;schema=BED3+10;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP.html;original_biosample_term_id=NTR:0000856;is_hg38_lifted=yes system_category Embryo life_stage Embryonic track_name ROADMAP-lifted Mesendoderm ChIP-seq H2BK5ac-histone-mark peaks (narrowPeak-lifted) [Life stage: Embryonic] [Histone ChIP-seq peaks]
H2BK5ac • Trophoblast NGRMPX4FYO44MU • ROADMAP [lifted]25693563 ChIP-seq Trophoblast Histone Show metadata Download track Track metadata identifier NGRMPX4FYO44MU data_source ROADMAP-lifted Download track Download number_of_intervals 147,618 bp_covered 42,811,526 output_type peaks genome_build hg38 cell_type Trophoblast biosample_type In vitro differentiated cells biosample_term_id UBERON:0000088 tissue_category Embryo encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H2BK5ac assay ChIP-seq file_format bed narrowPeak-lifted file_size 4,671,965 downloaded_date 08/15/2018 release_date 11/30/2014 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H2BK5ac.AY225.narrowPeak.lifted.bed.gz processed_file_md5 85cd61a701f637bb7e0fbe4851eb6045 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H2BK5ac.AY225.narrowPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H2BK5ac.AY225.narrowPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/narrowPeak/UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H2BK5ac.AY225.narrowPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/narrowpeak/UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H2BK5ac.AY225.narrowPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/narrowpeak/ raw_file_md5 2d2f292fcb2ee4adf806afad35b1b479 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H2BK5ac peaks track_description version=2015;Original_cell_type=H1 BMP4 Derived Trophoblast Cultured Cells;Donor=AY225;schema=BED3+10;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP.html;original_biosample_term_id=NTR:0000856;is_hg38_lifted=yes system_category Embryo life_stage Embryonic track_name ROADMAP-lifted Trophoblast ChIP-seq H2BK5ac-histone-mark peaks (narrowPeak-lifted) [Life stage: Embryonic] [Histone ChIP-seq peaks]
H2BK5ac • Mesenchymal stem cell NGRMPZAXDTFS7F • ROADMAP [lifted]25693563 ChIP-seq Mesenchymal stem cell Histone Show metadata Download track Track metadata identifier NGRMPZAXDTFS7F data_source ROADMAP-lifted Download track Download number_of_intervals 134,845 bp_covered 145,758,569 output_type peaks genome_build hg38 cell_type Mesenchymal stem cell biosample_type Stem cell biosample_term_id CL:0000134 tissue_category Connective Tissue encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H2BK5ac assay ChIP-seq file_format bed gappedPeak-lifted file_size 6,401,836 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/28/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.H1_Derived_Mesenchymal_Stem_Cells.H2BK5ac.SK516.gappedPeak.lifted.bed.gz processed_file_md5 3c674efd2209f5a6f958d0c1a10eb303 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.H1_Derived_Mesenchymal_Stem_Cells.H2BK5ac.SK516.gappedPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.H1_Derived_Mesenchymal_Stem_Cells.H2BK5ac.SK516.gappedPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/gappedPeak/UCSD.H1_Derived_Mesenchymal_Stem_Cells.H2BK5ac.SK516.gappedPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/gappedpeak/UCSD.H1_Derived_Mesenchymal_Stem_Cells.H2BK5ac.SK516.gappedPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/gappedpeak/ raw_file_md5 08008783040ea9bcd27517626924f917 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H2BK5ac peaks track_description version=2015;Original_cell_type=H1 Derived Mesenchymal Stem Cells;Donor=SK516;schema=BED3+15;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Skeletal life_stage Embryonic track_name ROADMAP-lifted Mesenchymal stem cell ChIP-seq H2BK5ac-histone-mark peaks (gappedPeak-lifted) [Life stage: Embryonic] [Histone ChIP-seq peaks]
H2BK5ac • H1-hESC NGRMPZT763SHSX • ROADMAP [lifted]25693563 ChIP-seq H1-hESC Histone Show metadata Download track Track metadata identifier NGRMPZT763SHSX data_source ROADMAP-lifted Download track Download number_of_intervals 106,466 bp_covered 22,652,053 output_type peaks genome_build hg38 cell_type H1-hESC biosample_type Stem cell biosample_term_id EFO:0003042 tissue_category Embryo encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H2BK5ac assay ChIP-seq file_format bed narrowPeak-lifted file_size 3,223,618 downloaded_date 08/15/2018 release_date 11/30/2014 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/UCSD.H1.H2BK5ac.SAK202.narrowPeak.lifted.bed.gz processed_file_md5 b8d54f970968bf5c7da9bce09c6a67dd wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/UCSD.H1.H2BK5ac.SAK202.narrowPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/UCSD.H1.H2BK5ac.SAK202.narrowPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/narrowPeak/UCSD.H1.H2BK5ac.SAK202.narrowPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/narrowpeak/UCSD.H1.H2BK5ac.SAK202.narrowPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/narrowpeak/ raw_file_md5 ad7781ac2b3adb4f617303b3eafb4797 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H2BK5ac peaks track_description version=2015;Original_cell_type=H1;Donor=SAK202;schema=BED3+10;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP.html;original_biosample_term_id=EFO:0003042;is_hg38_lifted=yes system_category Embryo life_stage Embryonic track_name ROADMAP-lifted H1-hESC ChIP-seq H2BK5ac-histone-mark peaks (narrowPeak-lifted) [Life stage: Embryonic] [Histone ChIP-seq peaks]
H2BK5ac • Mesendoderm NGRMPZWXNTQV73 • ROADMAP [lifted]25693563 ChIP-seq Mesendoderm Histone Show metadata Download track Track metadata identifier NGRMPZWXNTQV73 data_source ROADMAP-lifted Download track Download number_of_intervals 112,114 bp_covered 242,196,085 output_type peaks genome_build hg38 cell_type Mesendoderm biosample_type In vitro differentiated cells biosample_term_id BTO:0003953 tissue_category Embryo encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H2BK5ac assay ChIP-seq file_format bed gappedPeak-lifted file_size 5,961,884 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/28/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.H2BK5ac.AK171.gappedPeak.lifted.bed.gz processed_file_md5 6a2902d0a01db3de7ddd2c79ed7880c0 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.H2BK5ac.AK171.gappedPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.H2BK5ac.AK171.gappedPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/gappedPeak/UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.H2BK5ac.AK171.gappedPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/gappedpeak/UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.H2BK5ac.AK171.gappedPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/gappedpeak/ raw_file_md5 b8498fbc3c2e760a7e6fa676e6637b72 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H2BK5ac peaks track_description version=2015;Original_cell_type=H1 BMP4 Derived Mesendoderm Cultured Cells;Donor=AK171;schema=BED3+15;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP.html;original_biosample_term_id=NTR:0000856;is_hg38_lifted=yes system_category Embryo life_stage Embryonic track_name ROADMAP-lifted Mesendoderm ChIP-seq H2BK5ac-histone-mark peaks (gappedPeak-lifted) [Life stage: Embryonic] [Histone ChIP-seq peaks]
H3F3A • Loucy NGENC34XZ6HU5C • ENCODE22955616 | 41168159 | 31713622 Histone ChIP-seq Loucy Histone Show metadata Download track Track metadata identifier NGENC34XZ6HU5C data_source ENCODE Download track Download number_of_intervals 17,473 bp_covered 9,091,286 output_type pseudoreplicated peaks genome_build hg38 cell_type Loucy biosample_type Cell line biosample_term_id EFO:0007112 tissue_category Blood encode_experiment_id ENCSR267UCE biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody H3F3A assay Histone ChIP-seq file_format bed narrowPeak file_size 446,976 downloaded_date 06/12/2022 release_date 11/02/2020 date_added_to_filer 08/22/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF401IGU.bed.gz processed_file_md5 ebb501e64d664860459178843672bd91 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF401IGU.bed.gz -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF401IGU.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF401IGU/@@download/ENCFF401IGU.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF401IGU.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 01677d54511a5a0e62e046552540d15c data_category Histone ChIP-seq peaks Genomic feature type Histone ChIP-seq H3F3A pseudoreplicated peaks track_description version=2024;Biosample_summary=Homo sapiens Loucy;Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=ENCYCLOPEDIAv1,ENCYCLOPEDIAv2;Life_stage_age=adult 38 years;Reference=PMID:32728046;External_resources=GEO:GSE96013;Project=ENCODE;Award=U54HG006991;Experiment_date_released=2016-11-02,2014-11-20;Submitted_track_name=pooled-pr1_vs_pooled-pr2.overlap.bfilt.narrowPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=Loucy;ENCODE_cell_slims=T cell,leukocyte,hematopoietic cell;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.6.0 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0007112;is_hg38_lifted=no;narrowPeak_filter=qValueLog10 system_category Cardiovascular life_stage Adult track_name ENCODE Loucy (repl. 1, 2) Histone ChIP-seq H3F3A pseudoreplicated peaks (narrowPeak) [Experiment: ENCSR267UCE] [Life stage: Adult] [Histone ChIP-seq peaks]
H3F3A • NCI-H929 NGENC4ILCAIDAG • ENCODE22955616 | 41168159 | 31713622 Histone ChIP-seq NCI-H929 Histone Show metadata Download track Track metadata identifier NGENC4ILCAIDAG data_source ENCODE Download track Download number_of_intervals 19,884 bp_covered 16,283,025 output_type replicated peaks genome_build hg38 cell_type NCI-H929 biosample_type Cell line biosample_term_id EFO:0001221 tissue_category Immune encode_experiment_id ENCSR536SZD biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody H3F3A assay Histone ChIP-seq file_format bed narrowPeak file_size 481,895 downloaded_date 06/12/2022 release_date 12/11/2020 date_added_to_filer 08/22/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF250HVU.bed.gz processed_file_md5 a9f175d7fa7b3094866140794eb00fb7 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF250HVU.bed.gz -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF250HVU.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF250HVU/@@download/ENCFF250HVU.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF250HVU.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 8721e2853753492ad6975c5a8dfb99be data_category Histone ChIP-seq peaks Genomic feature type Histone ChIP-seq H3F3A replicated peaks track_description version=2024;Biosample_summary=Homo sapiens NCI-H929;Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=ENCYCLOPEDIAv1,ENCYCLOPEDIAv2;Life_stage_age=adult 62 years;Reference=PMID:32728046;External_resources=GEO:GSE96225;Project=ENCODE;Award=U54HG006991;Experiment_date_released=2017-01-13,2016-10-12;Submitted_track_name=rep1_vs_rep2.overlap.bfilt.narrowPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=NCI-H929;ENCODE_cell_slims=B cell,cancer cell,leukocyte,hematopoietic cell;ENCODE_system_slims=immune system,skeletal system;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001221;is_hg38_lifted=no;narrowPeak_filter=qValueLog10 system_category Lymphatic life_stage Adult track_name ENCODE NCI-H929 (repl. 1, 2) Histone ChIP-seq H3F3A replicated peaks (narrowPeak) [Experiment: ENCSR536SZD] [Life stage: Adult] [Histone ChIP-seq peaks]
H3F3A • SU-DHL-6 NGENC4LGSDPHF7 • ENCODE22955616 | 41168159 | 31713622 Histone ChIP-seq SU-DHL-6 Histone Show metadata Download track Track metadata identifier NGENC4LGSDPHF7 data_source ENCODE Download track Download number_of_intervals 49,297 bp_covered 41,344,650 output_type pseudoreplicated peaks genome_build hg38 cell_type SU-DHL-6 biosample_type Cell line biosample_term_id EFO:0002357 tissue_category Blood encode_experiment_id ENCSR771QCM biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody H3F3A assay Histone ChIP-seq file_format bed narrowPeak file_size 1,267,224 downloaded_date 06/12/2022 release_date 10/31/2020 date_added_to_filer 08/22/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF067QKD.bed.gz processed_file_md5 d5c12f9902fb26369fb544684d1d9598 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF067QKD.bed.gz -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF067QKD.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF067QKD/@@download/ENCFF067QKD.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF067QKD.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 d5e3ab2b6d22ae91cf4d1a83150c90a2 data_category Histone ChIP-seq peaks Genomic feature type Histone ChIP-seq H3F3A pseudoreplicated peaks track_description version=2024;Biosample_summary=Homo sapiens SU-DHL-6;Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=ENCYCLOPEDIAv1,ENCYCLOPEDIAv2;Life_stage_age=adult 43 years;Reference=PMID:32728046;External_resources=GEO:GSE96369;Project=ENCODE;Award=U54HG006991;Experiment_date_released=2016-12-05,2014-07-11;Submitted_track_name=pooled-pr1_vs_pooled-pr2.overlap.bfilt.narrowPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=SU-DHL-6;ENCODE_cell_slims=B cell,leukocyte,hematopoietic cell;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=SU-DHL-6;Analysis_title=ENCODE4 v1.6.0 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002357;is_hg38_lifted=no;narrowPeak_filter=qValueLog10 system_category Cardiovascular life_stage Adult track_name ENCODE SU-DHL-6 (repl. 1, 2) Histone ChIP-seq H3F3A pseudoreplicated peaks (narrowPeak) [Experiment: ENCSR771QCM] [Life stage: Adult] [Histone ChIP-seq peaks]