H3K27ac • BLaER1 NGENCDOQI4H53Y • ENCODE22955616 | 41168159 | 31713622 Histone ChIP-seq BLaER1 Histone Show metadata Download track Track metadata identifier NGENCDOQI4H53Y data_source ENCODE Download track Download number_of_intervals 44,494 bp_covered 79,350,898 output_type pseudoreplicated peaks genome_build hg38 cell_type BLaER1 biosample_type Cell line biosample_term_id EFO:0030018 tissue_category Blood encode_experiment_id ENCSR972GGW biological_replicate 1 technical_replicate 1_1 antibody H3K27ac assay Histone ChIP-seq file_format bed narrowPeak file_size 1,300,882 downloaded_date 05/15/2024 release_date 02/16/2023 date_added_to_filer 08/22/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF220HOW.bed.gz processed_file_md5 ffa80c3f3fbfbf87c2d97172ed7d3b22 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF220HOW.bed.gz -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF220HOW.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF220HOW/@@download/ENCFF220HOW.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF220HOW.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 6cbf3f82a6db299dc11e37a367d841ee data_category Histone ChIP-seq peaks Genomic feature type Histone ChIP-seq H3K27ac pseudoreplicated peaks track_description version=2024;Biosample_summary=Homo sapiens BLaER1 3 hours after the sample was treated with 100 nM 17_-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1;Lab=Roderic Guigo, CRG;ENCODE_internal_tags=RegulomeDB_2_2;Life_stage_age=NR;Reference=NR;External_resources=GEO:GSE258796;Project=community;Award=ERC-2011-AdG-294653-RNA-MAPS;Experiment_date_released=2022-05-10;Submitted_track_name=rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=BLaER1;ENCODE_cell_slims=NR;ENCODE_system_slims=immune system,skeletal system;ENCODE_biosample_term_synonyms=B cell Leukemia C/EBPalphaER clone 1;Analysis_title=ENCODE4 v1.8.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0030018;is_hg38_lifted=no;narrowPeak_filter=qValueLog10 system_category Cardiovascular life_stage Unknown track_name ENCODE BLaER1 (repl. 1) Histone ChIP-seq H3K27ac pseudoreplicated peaks (narrowPeak) [Experiment: ENCSR972GGW] [Histone ChIP-seq peaks]
H3K27ac • BLaER1 NGENCDOWDCQBVR • ENCODE22955616 | 41168159 | 31713622 Histone ChIP-seq BLaER1 Histone Show metadata Download track Track metadata identifier NGENCDOWDCQBVR data_source ENCODE Download track Download number_of_intervals 41,702 bp_covered 65,107,704 output_type pseudoreplicated peaks genome_build hg38 cell_type BLaER1 biosample_type Cell line biosample_term_id EFO:0030018 tissue_category Blood encode_experiment_id ENCSR820DOR biological_replicate 1 technical_replicate 1_1 antibody H3K27ac assay Histone ChIP-seq file_format bed narrowPeak file_size 1,211,670 downloaded_date 05/15/2024 release_date 02/16/2023 date_added_to_filer 08/22/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF034DFE.bed.gz processed_file_md5 0076146f0d93047bee7887f06252e270 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF034DFE.bed.gz -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF034DFE.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF034DFE/@@download/ENCFF034DFE.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF034DFE.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 474b84cc7041b70a4554466927850660 data_category Histone ChIP-seq peaks Genomic feature type Histone ChIP-seq H3K27ac pseudoreplicated peaks track_description version=2024;Biosample_summary=Homo sapiens BLaER1 120 hours after the sample was treated with 100 nM 17_-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1;Lab=Roderic Guigo, CRG;ENCODE_internal_tags=RegulomeDB_2_2;Life_stage_age=NR;Reference=NR;External_resources=GEO:GSE259030;Project=community;Award=ERC-2011-AdG-294653-RNA-MAPS;Experiment_date_released=2022-05-10;Submitted_track_name=rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=BLaER1;ENCODE_cell_slims=NR;ENCODE_system_slims=immune system,skeletal system;ENCODE_biosample_term_synonyms=B cell Leukemia C/EBPalphaER clone 1;Analysis_title=ENCODE4 v1.8.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0030018;is_hg38_lifted=no;narrowPeak_filter=qValueLog10 system_category Cardiovascular life_stage Unknown track_name ENCODE BLaER1 (repl. 1) Histone ChIP-seq H3K27ac pseudoreplicated peaks (narrowPeak) [Experiment: ENCSR820DOR] [Histone ChIP-seq peaks]
H3K27ac • A549 NGENCDQVLFRBGD • ENCODE22955616 | 41168159 | 31713622 Histone ChIP-seq A549 Histone Show metadata Download track Track metadata identifier NGENCDQVLFRBGD data_source ENCODE Download track Download number_of_intervals 76,950 bp_covered 130,985,622 output_type pseudoreplicated peaks genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR734FLK biological_replicate 2 technical_replicate 2_1 antibody H3K27ac assay Histone ChIP-seq file_format bed narrowPeak file_size 2,250,190 downloaded_date 07/10/2025 release_date 10/01/2020 date_added_to_filer 07/30/2025 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/2/ENCFF244FAV.bed.gz processed_file_md5 3ba5ba7fb58ae60b3cee6260011a522c wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/2/ENCFF244FAV.bed.gz -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/2/ENCFF244FAV.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF244FAV/@@download/ENCFF244FAV.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF244FAV.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 0a983b976c00c40736037d56ef6b51ba data_category Histone ChIP-seq peaks Genomic feature type Histone ChIP-seq H3K27ac pseudoreplicated peaks track_description version=2024;Biosample_summary=Homo sapiens A549 treated with 100 nM dexamethasone (agonist) for 5 minutes;Lab=Tim Reddy, Duke;ENCODE_internal_tags=NR;Life_stage_age=adult 58 years;Reference=NR;External_resources=GEO:GSE175094;Project=GGR;Award=U01HG007900;Experiment_date_released=2017-10-19;Submitted_track_name=rep2-pr1_vs_rep2-pr2.overlap.bfilt.narrowPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=A549;ENCODE_cell_slims=cancer cell;ENCODE_system_slims=respiratory system;ENCODE_biosample_term_synonyms=A549 cell,A-549;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no;narrowPeak_filter=qValueLog10 system_category Respiratory life_stage Adult track_name ENCODE A549 (repl. 2) Histone ChIP-seq H3K27ac pseudoreplicated peaks (narrowPeak) [Experiment: ENCSR734FLK] [Life stage: Adult] [Histone ChIP-seq peaks]
H3K27ac • A549 NGENCDRVQ2YCN3 • ENCODE22955616 | 41168159 | 31713622 Histone ChIP-seq A549 Histone Show metadata Download track Track metadata identifier NGENCDRVQ2YCN3 data_source ENCODE Download track Download number_of_intervals 55,911 bp_covered 91,617,331 output_type pseudoreplicated peaks genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR350EFV biological_replicate 3 technical_replicate 3_1 antibody H3K27ac assay Histone ChIP-seq file_format bed narrowPeak file_size 1,617,816 downloaded_date 07/10/2025 release_date 10/02/2020 date_added_to_filer 07/30/2025 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/2/ENCFF930IQI.bed.gz processed_file_md5 2b3362a0543d7f50d5c17b4fa49908b4 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/2/ENCFF930IQI.bed.gz -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/2/ENCFF930IQI.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF930IQI/@@download/ENCFF930IQI.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF930IQI.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 7c416fb91e2ceaea201661aec0456aee data_category Histone ChIP-seq peaks Genomic feature type Histone ChIP-seq H3K27ac pseudoreplicated peaks track_description version=2024;Biosample_summary=Homo sapiens A549 treated with 100 nM dexamethasone (agonist) for 3 hours;Lab=Tim Reddy, Duke;ENCODE_internal_tags=NR;Life_stage_age=adult 58 years;Reference=NR;External_resources=GEO:GSE91248;Project=GGR;Award=U01HG007900;Experiment_date_released=2016-07-21;Submitted_track_name=rep3-pr1_vs_rep3-pr2.overlap.bfilt.narrowPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=A549;ENCODE_cell_slims=cancer cell;ENCODE_system_slims=respiratory system;ENCODE_biosample_term_synonyms=A549 cell,A-549;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no;narrowPeak_filter=qValueLog10 system_category Respiratory life_stage Adult track_name ENCODE A549 (repl. 3) Histone ChIP-seq H3K27ac pseudoreplicated peaks (narrowPeak) [Experiment: ENCSR350EFV] [Life stage: Adult] [Histone ChIP-seq peaks]
H3K27ac • Mesendoderm NGENCDSN63XBE4 • ENCODE22955616 | 41168159 | 31713622 Histone ChIP-seq Mesendoderm Histone Show metadata Download track Track metadata identifier NGENCDSN63XBE4 data_source ENCODE Download track Download number_of_intervals 2,837 bp_covered 577,411 output_type pseudoreplicated peaks genome_build hg38 cell_type Mesendoderm biosample_type In vitro differentiated cells biosample_term_id BTO:0003953 tissue_category Embryo encode_experiment_id ENCSR473PNT biological_replicate 2 technical_replicate 2_1 antibody H3K27ac assay Histone ChIP-seq file_format bed narrowPeak file_size 58,980 downloaded_date 06/12/2022 release_date 10/19/2020 date_added_to_filer 08/22/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF443VYR.bed.gz processed_file_md5 201929294bb5f1e950927fdb524453e3 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF443VYR.bed.gz -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF443VYR.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF443VYR/@@download/ENCFF443VYR.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF443VYR.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 444b6be757fb1d524805b0a5e5c9f401 data_category Histone ChIP-seq peaks Genomic feature type Histone ChIP-seq H3K27ac pseudoreplicated peaks track_description version=2024;Biosample_summary=Homo sapiens mesendoderm originated from H1;Lab=Bing Ren, UCSD;ENCODE_internal_tags=ENCYCLOPEDIAv1,RegulomeDB_2_2,ccre_inputv2,ENCYCLOPEDIAv2;Life_stage_age=NR;Reference=PMID:32728046;External_resources=GEO:GSM864799,SCREEN-GRCh38:mesendoderm_originated_from_H1-hESC,GEO:GSM753426,GEO:GSM753425;Project=Roadmap;Award=U01ES017166;Experiment_date_released=2013-07-31;Submitted_track_name=rep2-pr1_vs_rep2-pr2.overlap.bfilt.narrowPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=mesendoderm;ENCODE_cell_slims=NR;ENCODE_system_slims=NR;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ENCODE.html;original_biosample_term_id=NTR:0000856;is_hg38_lifted=no;narrowPeak_filter=qValueLog10 system_category Embryo life_stage Embryonic track_name ENCODE Mesendoderm (repl. 2) Histone ChIP-seq H3K27ac pseudoreplicated peaks (narrowPeak) [Experiment: ENCSR473PNT] [Life stage: Embryonic] [Histone ChIP-seq peaks]
H3K27ac • Liver lobe NGENCDVFBN7ERM • ENCODE22955616 | 41168159 | 31713622 Histone ChIP-seq Liver lobe Histone Show metadata Download track Track metadata identifier NGENCDVFBN7ERM data_source ENCODE Download track Download number_of_intervals 98,823 bp_covered 132,976,189 output_type replicated peaks genome_build hg38 cell_type Liver lobe biosample_type Tissue biosample_term_id UBERON:0001113 tissue_category Liver encode_experiment_id ENCSR981UJA biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody H3K27ac assay Histone ChIP-seq file_format bed narrowPeak file_size 2,642,936 downloaded_date 06/12/2022 release_date 09/17/2020 date_added_to_filer 08/22/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF312BBX.bed.gz processed_file_md5 21432e0af7a8adbad91f69c1f6edf64b wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF312BBX.bed.gz -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF312BBX.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF312BBX/@@download/ENCFF312BBX.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF312BBX.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 c94b0817d4e4da0b89699bfa28c293e2 data_category Histone ChIP-seq peaks Genomic feature type Histone ChIP-seq H3K27ac replicated peaks track_description version=2024;Biosample_summary=Homo sapiens right lobe of liver tissue female adult (53 years);Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=ccre_inputv2,ENTEx,ccre_inputv1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=adult 53 years;Reference=PMID:32728046;External_resources=SCREEN-GRCh38:right_lobe_of_liver_female_adult_53_years,GEO:GSE96504;Project=ENCODE;Award=U54HG006991;Experiment_date_released=2016-11-03;Submitted_track_name=rep1_vs_rep2.overlap.bfilt.narrowPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=right lobe of liver;ENCODE_cell_slims=NR;ENCODE_system_slims=exocrine system,digestive system,endocrine system;ENCODE_biosample_term_synonyms=right liver lobe,lobus hepaticus dexter,liver right lobe;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ENCODE.html;original_biosample_term_id=UBERON:0001114;is_hg38_lifted=no;narrowPeak_filter=qValueLog10 system_category Digestive life_stage Adult track_name ENCODE Liver lobe (repl. 1, 2) Histone ChIP-seq H3K27ac replicated peaks (narrowPeak) [Experiment: ENCSR981UJA] [Life stage: Adult] [Histone ChIP-seq peaks]
H3K27ac • Memory B cell NGENCDXYBGE2R5 • ENCODE22955616 | 41168159 | 31713622 Mint-ChIP-seq Memory B cell Histone Show metadata Download track Track metadata identifier NGENCDXYBGE2R5 data_source ENCODE Download track Download number_of_intervals 197,033 bp_covered 144,698,676 output_type pseudoreplicated peaks genome_build hg38 cell_type Memory B cell biosample_type Primary cell biosample_term_id CL:0000787 tissue_category Blood encode_experiment_id ENCSR346UYQ biological_replicate 1 technical_replicate 1_1, 1_2 antibody H3K27ac assay Mint-ChIP-seq file_format bed narrowPeak file_size 5,153,109 downloaded_date 06/12/2022 release_date 05/05/2021 date_added_to_filer 08/22/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/Mint-ChIP-seq/narrowpeak/hg38/ENCFF128LEM.bed.gz processed_file_md5 6e6eeb0b35100d470ddede4823d518bc wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Mint-ChIP-seq/narrowpeak/hg38/ENCFF128LEM.bed.gz -P GADB/Annotationtracks/ENCODE/data/Mint-ChIP-seq/narrowpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Mint-ChIP-seq/narrowpeak/hg38/ENCFF128LEM.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/Mint-ChIP-seq/narrowpeak/hg38/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF128LEM/@@download/ENCFF128LEM.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF128LEM.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 934d318c4739d6816c8ede53af8048cc data_category Histone ChIP-seq peaks Genomic feature type Mint-ChIP-seq H3K27ac pseudoreplicated peaks track_description version=2024;Biosample_summary=Homo sapiens IgD-negative memory B cell;Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=YaleImmuneCells;Life_stage_age=NR;Reference=NR;External_resources=GEO:GSE177226;Project=ENCODE;Award=UM1HG009390;Experiment_date_released=2020-09-06,2020-08-04;Submitted_track_name=rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=IgD-negative memory B cell;ENCODE_cell_slims=B cell,leukocyte,hematopoietic cell;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=IgD- memory B cell;Analysis_title=ENCODE4 v1.8.0 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ENCODE.html;original_biosample_term_id=CL:0001053;is_hg38_lifted=no;narrowPeak_filter=qValueLog10 system_category Cardiovascular life_stage Unknown track_name ENCODE Memory B cell (repl. 1) Mint-ChIP-seq H3K27ac-histone-mark pseudoreplicated peaks (narrowPeak) [Experiment: ENCSR346UYQ] [Histone ChIP-seq peaks]
H3K27ac • Left ventricle NGENCDYWDNII3U • ENCODE22955616 | 41168159 | 31713622 Histone ChIP-seq Left ventricle Histone Show metadata Download track Track metadata identifier NGENCDYWDNII3U data_source ENCODE Download track Download number_of_intervals 73,524 bp_covered 114,994,830 output_type pseudoreplicated peaks genome_build hg38 cell_type Left ventricle biosample_type Tissue biosample_term_id UBERON:0002084 tissue_category Heart encode_experiment_id ENCSR748OJA biological_replicate 1 technical_replicate 1_1, 1_2 antibody H3K27ac assay Histone ChIP-seq file_format bed narrowPeak file_size 2,039,149 downloaded_date 05/15/2024 release_date 07/20/2022 date_added_to_filer 08/22/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF513UPR.bed.gz processed_file_md5 959954742fb4c10ed45b71390922d679 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF513UPR.bed.gz -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF513UPR.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF513UPR/@@download/ENCFF513UPR.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF513UPR.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 d2245b7f8708f3a4d8558c3817804a8d data_category Histone ChIP-seq peaks Genomic feature type Histone ChIP-seq H3K27ac pseudoreplicated peaks track_description version=2024;Biosample_summary=Homo sapiens heart left ventricle tissue male adult (69 years);Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_2_2;Life_stage_age=adult 69 years;Reference=NR;External_resources=GEO:GSE230921;Project=ENCODE;Award=UM1HG009390;Experiment_date_released=2022-07-21,2022-06-07;Submitted_track_name=rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=heart left ventricle;ENCODE_cell_slims=NR;ENCODE_system_slims=circulatory system;ENCODE_biosample_term_synonyms=cardiac left ventricle,left cardiac ventricle,left ventricle of heart,left ventricle;Analysis_title=ENCODE4 v1.8.0 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ENCODE.html;original_biosample_term_id=UBERON:0002084;is_hg38_lifted=no;narrowPeak_filter=qValueLog10 system_category Cardiovascular life_stage Adult track_name ENCODE Left ventricle (repl. 1) Histone ChIP-seq H3K27ac pseudoreplicated peaks (narrowPeak) [Experiment: ENCSR748OJA] [Life stage: Adult] [Histone ChIP-seq peaks]
H3K27ac • DOHH2 NGENCE3QT353LI • ENCODE22955616 | 41168159 | 31713622 Histone ChIP-seq DOHH2 Histone Show metadata Download track Track metadata identifier NGENCE3QT353LI data_source ENCODE Download track Download number_of_intervals 30,897 bp_covered 56,775,884 output_type replicated peaks genome_build hg38 cell_type DOHH2 biosample_type Cell line biosample_term_id EFO:0002167 tissue_category Blood encode_experiment_id ENCSR741STU biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody H3K27ac assay Histone ChIP-seq file_format bed narrowPeak file_size 917,274 downloaded_date 06/12/2022 release_date 10/20/2020 date_added_to_filer 08/22/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF981CRQ.bed.gz processed_file_md5 53ac0233c802464df8968b2ab8d1ab90 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF981CRQ.bed.gz -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF981CRQ.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF981CRQ/@@download/ENCFF981CRQ.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF981CRQ.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 9a0fea7992c4286e87b9e6186e06eb3c data_category Histone ChIP-seq peaks Genomic feature type Histone ChIP-seq H3K27ac replicated peaks track_description version=2024;Biosample_summary=Homo sapiens DOHH2;Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=ccre_inputv2,ENCYCLOPEDIAv2,ccre_inputv1,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=adult 60 years;Reference=PMID:32728046;External_resources=GEO:GSE86743,SCREEN-GRCh38:DOHH2;Project=ENCODE;Award=U54HG006991;Experiment_date_released=2014-07-11;Submitted_track_name=rep1_vs_rep2.overlap.bfilt.narrowPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=DOHH2;ENCODE_cell_slims=B cell,leukocyte,hematopoietic cell;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002167;is_hg38_lifted=no;narrowPeak_filter=qValueLog10 system_category Cardiovascular life_stage Adult track_name ENCODE DOHH2 (repl. 1, 2) Histone ChIP-seq H3K27ac replicated peaks (narrowPeak) [Experiment: ENCSR741STU] [Life stage: Adult] [Histone ChIP-seq peaks]
H3K27ac • Gastrocnemius medialis NGENCE4FKBI7HN • ENCODE22955616 | 41168159 | 31713622 Histone ChIP-seq Gastrocnemius medialis Histone Show metadata Download track Track metadata identifier NGENCE4FKBI7HN data_source ENCODE Download track Download number_of_intervals 78,373 bp_covered 164,310,907 output_type pseudoreplicated peaks genome_build hg38 cell_type Gastrocnemius medialis biosample_type Tissue biosample_term_id UBERON:0011907 tissue_category Skeletal Muscle encode_experiment_id ENCSR948YYZ biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody H3K27ac assay Histone ChIP-seq file_format bed narrowPeak file_size 2,207,386 downloaded_date 06/12/2022 release_date 10/09/2020 date_added_to_filer 08/22/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF386XPK.bed.gz processed_file_md5 ac48482579c1214e7a247e7c99402a11 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF386XPK.bed.gz -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF386XPK.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF386XPK/@@download/ENCFF386XPK.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF386XPK.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 3aa28d60be2ed52fced30ae924641fba data_category Histone ChIP-seq peaks Genomic feature type Histone ChIP-seq H3K27ac pseudoreplicated peaks track_description version=2024;Biosample_summary=Homo sapiens gastrocnemius medialis tissue male adult (54 years);Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=ccre_inputv2,ENTEx,ccre_inputv1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=adult 54 years;Reference=PMID:32728046;External_resources=GEO:GSE96486,SCREEN-GRCh38:gastrocnemius_medialis_male_adult_54_years;Project=ENCODE;Award=U54HG006991;Experiment_date_released=2016-06-14,2016-06-02;Submitted_track_name=pooled-pr1_vs_pooled-pr2.overlap.bfilt.narrowPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=gastrocnemius medialis;ENCODE_cell_slims=NR;ENCODE_system_slims=musculature;ENCODE_biosample_term_synonyms=medial head of gastrocnemius muscle,medial head of gastrocnemius,caput mediale (musculus gastrocnemius),caput mediale musculus gastrocnemii;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ENCODE.html;original_biosample_term_id=UBERON:0011907;is_hg38_lifted=no;narrowPeak_filter=qValueLog10 system_category Muscular life_stage Adult track_name ENCODE Gastrocnemius medialis (repl. 1, 2) Histone ChIP-seq H3K27ac pseudoreplicated peaks (narrowPeak) [Experiment: ENCSR948YYZ] [Life stage: Adult] [Histone ChIP-seq peaks]
H3K27ac • Spleen NGENCE5SZYKLMY • ENCODE22955616 | 41168159 | 31713622 Histone ChIP-seq Spleen Histone Show metadata Download track Track metadata identifier NGENCE5SZYKLMY data_source ENCODE Download track Download number_of_intervals 32,657 bp_covered 37,544,073 output_type pseudoreplicated peaks genome_build hg38 cell_type Spleen biosample_type Tissue biosample_term_id UBERON:0002106 tissue_category Immune Organ encode_experiment_id ENCSR564WJA biological_replicate 1 technical_replicate 1_1, 1_2 antibody H3K27ac assay Histone ChIP-seq file_format bed narrowPeak file_size 784,600 downloaded_date 06/12/2022 release_date 07/23/2020 date_added_to_filer 08/22/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF462SOC.bed.gz processed_file_md5 a0025b385f9cdf5ff0eb03562dc29986 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF462SOC.bed.gz -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF462SOC.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF462SOC/@@download/ENCFF462SOC.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF462SOC.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 287eeba077922e613a23ee14bb0df69e data_category Histone ChIP-seq peaks Genomic feature type Histone ChIP-seq H3K27ac pseudoreplicated peaks track_description version=2024;Biosample_summary=Homo sapiens spleen tissue female adult (59 years);Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_2_2;Life_stage_age=adult 59 years;Reference=NR;External_resources=GEO:GSE167673;Project=ENCODE;Award=UM1HG009390;Experiment_date_released=2020-09-10,2020-09-03;Submitted_track_name=rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=spleen;ENCODE_cell_slims=NR;ENCODE_system_slims=digestive system,immune system;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.5.0 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ENCODE.html;original_biosample_term_id=UBERON:0002106;is_hg38_lifted=no;narrowPeak_filter=qValueLog10 system_category Lymphatic life_stage Adult track_name ENCODE Spleen (repl. 1) Histone ChIP-seq H3K27ac pseudoreplicated peaks (narrowPeak) [Experiment: ENCSR564WJA] [Life stage: Adult] [Histone ChIP-seq peaks]
H3K27ac • Aorta NGENCE5XKRRGM2 • ENCODE22955616 | 41168159 | 31713622 Histone ChIP-seq Aorta Histone Show metadata Download track Track metadata identifier NGENCE5XKRRGM2 data_source ENCODE Download track Download number_of_intervals 95,663 bp_covered 44,570,247 output_type pseudoreplicated peaks genome_build hg38 cell_type Aorta biosample_type Tissue biosample_term_id UBERON:0000947 tissue_category Blood Vessel encode_experiment_id ENCSR519CFV biological_replicate 2 technical_replicate 2_1 antibody H3K27ac assay Histone ChIP-seq file_format bed narrowPeak file_size 2,347,032 downloaded_date 06/12/2022 release_date 10/10/2020 date_added_to_filer 08/22/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF925GDM.bed.gz processed_file_md5 c5a242cee562595c84ab5901f8824868 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF925GDM.bed.gz -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF925GDM.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF925GDM/@@download/ENCFF925GDM.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF925GDM.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 2e898e784b29e5a08bd4e80387ea96fd data_category Histone ChIP-seq peaks Genomic feature type Histone ChIP-seq H3K27ac pseudoreplicated peaks track_description version=2024;Biosample_summary=Homo sapiens aorta tissue male adult (34 years);Lab=Bing Ren, UCSD;ENCODE_internal_tags=ccre_inputv2,ENCYCLOPEDIAv2,ccre_inputv1,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=adult 34 years;Reference=PMID:32728046;External_resources=GEO:GSM906392,GEO:GSM1582443,SCREEN-GRCh38:aorta_male_adult_34_years;Project=Roadmap;Award=U01ES017166;Experiment_date_released=2013-07-31;Submitted_track_name=rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=aorta;ENCODE_cell_slims=NR;ENCODE_system_slims=circulatory system;ENCODE_biosample_term_synonyms=trunk of aortic tree,trunk of systemic arterial tree;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ENCODE.html;original_biosample_term_id=UBERON:0000947;is_hg38_lifted=no;narrowPeak_filter=qValueLog10 system_category Cardiovascular life_stage Adult track_name ENCODE Aorta (repl. 2) Histone ChIP-seq H3K27ac pseudoreplicated peaks (narrowPeak) [Experiment: ENCSR519CFV] [Life stage: Adult] [Histone ChIP-seq peaks]
H3K27ac • A549 NGENCE62XMTLTA • ENCODE22955616 | 41168159 | 31713622 Histone ChIP-seq A549 Histone Show metadata Download track Track metadata identifier NGENCE62XMTLTA data_source ENCODE Download track Download number_of_intervals 95,318 bp_covered 135,306,286 output_type replicated peaks genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR480OHP biological_replicate 1, 3 technical_replicate 1_1, 3_1 antibody H3K27ac assay Histone ChIP-seq file_format bed narrowPeak file_size 2,753,116 downloaded_date 07/10/2025 release_date 10/01/2020 date_added_to_filer 07/30/2025 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/2/ENCFF370TZL.bed.gz processed_file_md5 1a66c658217bcbf52d57651cdd295aff wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/2/ENCFF370TZL.bed.gz -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/2/ENCFF370TZL.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF370TZL/@@download/ENCFF370TZL.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF370TZL.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 09f4b28ebabb72726d1c2f14faceadf0 data_category Histone ChIP-seq peaks Genomic feature type Histone ChIP-seq H3K27ac replicated peaks track_description version=2024;Biosample_summary=Homo sapiens A549 treated with 100 nM dexamethasone (agonist) for 25 minutes;Lab=Tim Reddy, Duke;ENCODE_internal_tags=NR;Life_stage_age=adult 58 years;Reference=NR;External_resources=GEO:GSE175286;Project=GGR;Award=U01HG007900;Experiment_date_released=2017-10-19;Submitted_track_name=rep1_vs_rep3.overlap.bfilt.narrowPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=A549;ENCODE_cell_slims=cancer cell;ENCODE_system_slims=respiratory system;ENCODE_biosample_term_synonyms=A549 cell,A-549;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=NR;Bio_rep=1, 2, 3;Tech_rep=1_1, 2_1, 3_1;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no;narrowPeak_filter=qValueLog10 system_category Respiratory life_stage Adult track_name ENCODE A549 (repl. 1, 3) Histone ChIP-seq H3K27ac replicated peaks (narrowPeak) [Experiment: ENCSR480OHP] [Life stage: Adult] [Histone ChIP-seq peaks]
H3K27ac • Natural killer cell NGENCE73EVHMHU • ENCODE22955616 | 41168159 | 31713622 Mint-ChIP-seq Natural killer cell Histone Show metadata Download track Track metadata identifier NGENCE73EVHMHU data_source ENCODE Download track Download number_of_intervals 84,868 bp_covered 125,552,958 output_type pseudoreplicated peaks genome_build hg38 cell_type Natural killer cell biosample_type Primary cell biosample_term_id CL:0000623 tissue_category Blood encode_experiment_id ENCSR246TTM biological_replicate 1 technical_replicate 1_1, 1_2 antibody H3K27ac assay Mint-ChIP-seq file_format bed narrowPeak file_size 2,351,009 downloaded_date 06/12/2022 release_date 05/05/2021 date_added_to_filer 08/22/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/Mint-ChIP-seq/narrowpeak/hg38/ENCFF570EYF.bed.gz processed_file_md5 a00e98e54626e716b486b4a68220112c wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Mint-ChIP-seq/narrowpeak/hg38/ENCFF570EYF.bed.gz -P GADB/Annotationtracks/ENCODE/data/Mint-ChIP-seq/narrowpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Mint-ChIP-seq/narrowpeak/hg38/ENCFF570EYF.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/Mint-ChIP-seq/narrowpeak/hg38/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF570EYF/@@download/ENCFF570EYF.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF570EYF.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 879cbe6fae41bb9658eccebf8649969d data_category Histone ChIP-seq peaks Genomic feature type Mint-ChIP-seq H3K27ac pseudoreplicated peaks track_description version=2024;Biosample_summary=Homo sapiens with multiple sclerosis| immature natural killer cell;Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=YaleImmuneCells;Life_stage_age=NR;Reference=NR;External_resources=GEO:GSE176871;Project=ENCODE;Award=UM1HG009390;Experiment_date_released=2020-09-02,2020-08-04;Submitted_track_name=rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=immature natural killer cell;ENCODE_cell_slims=NK cell,leukocyte,hematopoietic cell;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=immature NK cell;Analysis_title=ENCODE4 v1.8.0 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ENCODE.html;original_biosample_term_id=CL:0000823;is_hg38_lifted=no;narrowPeak_filter=qValueLog10 system_category Cardiovascular life_stage Unknown track_name ENCODE Natural killer cell (repl. 1) Mint-ChIP-seq H3K27ac-histone-mark pseudoreplicated peaks (narrowPeak) [Experiment: ENCSR246TTM] [Histone ChIP-seq peaks]
H3K27ac • BLaER1 NGENCEBCOFEDVF • ENCODE22955616 | 41168159 | 31713622 Histone ChIP-seq BLaER1 Histone Show metadata Download track Track metadata identifier NGENCEBCOFEDVF data_source ENCODE Download track Download number_of_intervals 64,123 bp_covered 105,547,511 output_type pseudoreplicated peaks genome_build hg38 cell_type BLaER1 biosample_type Cell line biosample_term_id EFO:0030018 tissue_category Blood encode_experiment_id ENCSR010OVI biological_replicate 2 technical_replicate 2_1 antibody H3K27ac assay Histone ChIP-seq file_format bed narrowPeak file_size 1,784,959 downloaded_date 05/15/2024 release_date 02/04/2023 date_added_to_filer 08/22/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF581QFL.bed.gz processed_file_md5 344d799c689249899d5fafc715895bd1 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF581QFL.bed.gz -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF581QFL.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF581QFL/@@download/ENCFF581QFL.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF581QFL.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 7c905695befd072ee5c2f623e0369564 data_category Histone ChIP-seq peaks Genomic feature type Histone ChIP-seq H3K27ac pseudoreplicated peaks track_description version=2024;Biosample_summary=Homo sapiens BLaER1 72 hours after the sample was treated with 100 nM 17_-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1;Lab=Roderic Guigo, CRG;ENCODE_internal_tags=RegulomeDB_2_2;Life_stage_age=NR;Reference=NR;External_resources=GEO:GSE256644;Project=community;Award=ERC-2011-AdG-294653-RNA-MAPS;Experiment_date_released=2022-05-10;Submitted_track_name=rep2-pr1_vs_rep2-pr2.overlap.bfilt.narrowPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=BLaER1;ENCODE_cell_slims=NR;ENCODE_system_slims=immune system,skeletal system;ENCODE_biosample_term_synonyms=B cell Leukemia C/EBPalphaER clone 1;Analysis_title=ENCODE4 v1.8.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0030018;is_hg38_lifted=no;narrowPeak_filter=qValueLog10 system_category Cardiovascular life_stage Unknown track_name ENCODE BLaER1 (repl. 2) Histone ChIP-seq H3K27ac pseudoreplicated peaks (narrowPeak) [Experiment: ENCSR010OVI] [Histone ChIP-seq peaks]
H3K27ac • BLaER1 NGENCEBRSPWLOS • ENCODE22955616 | 41168159 | 31713622 Histone ChIP-seq BLaER1 Histone Show metadata Download track Track metadata identifier NGENCEBRSPWLOS data_source ENCODE Download track Download number_of_intervals 66,865 bp_covered 108,855,639 output_type pseudoreplicated peaks genome_build hg38 cell_type BLaER1 biosample_type Cell line biosample_term_id EFO:0030018 tissue_category Blood encode_experiment_id ENCSR938FQG biological_replicate 2 technical_replicate 2_1 antibody H3K27ac assay Histone ChIP-seq file_format bed narrowPeak file_size 1,854,335 downloaded_date 05/15/2024 release_date 02/16/2023 date_added_to_filer 08/22/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF211IDF.bed.gz processed_file_md5 a8ecb9bf9a537dc3a9f1654cbcda93b0 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF211IDF.bed.gz -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF211IDF.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF211IDF/@@download/ENCFF211IDF.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF211IDF.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 c972a1b9b79f71365524eef1afb1c2f5 data_category Histone ChIP-seq peaks Genomic feature type Histone ChIP-seq H3K27ac pseudoreplicated peaks track_description version=2024;Biosample_summary=Homo sapiens BLaER1 9 hours after the sample was treated with 100 nM 17_-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1;Lab=Roderic Guigo, CRG;ENCODE_internal_tags=RegulomeDB_2_2;Life_stage_age=NR;Reference=NR;External_resources=GEO:GSE258405;Project=community;Award=ERC-2011-AdG-294653-RNA-MAPS;Experiment_date_released=2022-05-10;Submitted_track_name=rep2-pr1_vs_rep2-pr2.overlap.bfilt.narrowPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=BLaER1;ENCODE_cell_slims=NR;ENCODE_system_slims=immune system,skeletal system;ENCODE_biosample_term_synonyms=B cell Leukemia C/EBPalphaER clone 1;Analysis_title=ENCODE4 v1.8.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0030018;is_hg38_lifted=no;narrowPeak_filter=qValueLog10 system_category Cardiovascular life_stage Unknown track_name ENCODE BLaER1 (repl. 2) Histone ChIP-seq H3K27ac pseudoreplicated peaks (narrowPeak) [Experiment: ENCSR938FQG] [Histone ChIP-seq peaks]
H3K27ac • T-cell NGENCEEDIRJCJW • ENCODE22955616 | 41168159 | 31713622 Mint-ChIP-seq T-cell Histone Show metadata Download track Track metadata identifier NGENCEEDIRJCJW data_source ENCODE Download track Download number_of_intervals 176,647 bp_covered 129,370,358 output_type pseudoreplicated peaks genome_build hg38 cell_type T-cell biosample_type Primary cell biosample_term_id CL:0000084 tissue_category Blood encode_experiment_id ENCSR407QDX biological_replicate 1, 2 technical_replicate 1_1, 1_2, 2_1, 2_2 antibody H3K27ac assay Mint-ChIP-seq file_format bed narrowPeak file_size 4,702,878 downloaded_date 06/12/2022 release_date 05/05/2021 date_added_to_filer 08/22/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/Mint-ChIP-seq/narrowpeak/hg38/ENCFF994DAS.bed.gz processed_file_md5 37b32a93da5739b9af745e7084a0f933 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Mint-ChIP-seq/narrowpeak/hg38/ENCFF994DAS.bed.gz -P GADB/Annotationtracks/ENCODE/data/Mint-ChIP-seq/narrowpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Mint-ChIP-seq/narrowpeak/hg38/ENCFF994DAS.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/Mint-ChIP-seq/narrowpeak/hg38/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF994DAS/@@download/ENCFF994DAS.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF994DAS.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 324a6e9cdf3810e788be0e5173419403 data_category Histone ChIP-seq peaks Genomic feature type Mint-ChIP-seq H3K27ac pseudoreplicated peaks track_description version=2024;Biosample_summary=Homo sapiens activated T-cell male adult (38 years) treated with anti-CD3 and anti-CD28 coated beads for 24 hours, 50 U/mL Interleukin-2 for 24 hours;Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=NR;Life_stage_age=adult 38 years;Reference=NR;External_resources=GEO:GSE177101;Project=ENCODE;Award=UM1HG009390;Experiment_date_released=2020-09-02,2020-08-04;Submitted_track_name=pooled-pr1_vs_pooled-pr2.overlap.bfilt.narrowPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=activated T-cell;ENCODE_cell_slims=T cell,leukocyte,hematopoietic cell;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.8.0 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ENCODE.html;original_biosample_term_id=NTR:0000537;is_hg38_lifted=no;narrowPeak_filter=qValueLog10 system_category Cardiovascular life_stage Adult track_name ENCODE T-cell (repl. 1, 2) Mint-ChIP-seq H3K27ac-histone-mark pseudoreplicated peaks (narrowPeak) [Experiment: ENCSR407QDX] [Life stage: Adult] [Histone ChIP-seq peaks]
H3K27ac • SJCRH30 NGENCEFHVFK7YD • ENCODE22955616 | 41168159 | 31713622 Histone ChIP-seq SJCRH30 Histone Show metadata Download track Track metadata identifier NGENCEFHVFK7YD data_source ENCODE Download track Download number_of_intervals 44,545 bp_covered 62,192,517 output_type replicated peaks genome_build hg38 cell_type SJCRH30 biosample_type Cell line biosample_term_id EFO:0005722 tissue_category Skeletal Muscle encode_experiment_id ENCSR769CSE biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody H3K27ac assay Histone ChIP-seq file_format bed narrowPeak file_size 1,357,233 downloaded_date 06/12/2022 release_date 08/24/2020 date_added_to_filer 08/22/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF047MMJ.bed.gz processed_file_md5 7775bb77f2482474d6812e337117d977 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF047MMJ.bed.gz -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF047MMJ.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF047MMJ/@@download/ENCFF047MMJ.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF047MMJ.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 fc91c0d1fb2f787e2c79846351b239c0 data_category Histone ChIP-seq peaks Genomic feature type Histone ChIP-seq H3K27ac replicated peaks track_description version=2024;Biosample_summary=Homo sapiens SJCRH30;Lab=Michael Snyder, Stanford;ENCODE_internal_tags=RegulomeDB_2_2;Life_stage_age=child 17 years;Reference=NR;External_resources=GEO:GSE167634;Project=ENCODE;Award=UM1HG009442;Experiment_date_released=2020-08-28,2020-08-21;Submitted_track_name=rep1_vs_rep2.overlap.bfilt.narrowPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=SJCRH30;ENCODE_cell_slims=fibroblast,cancer cell,connective tissue cell;ENCODE_system_slims=musculature;ENCODE_biosample_term_synonyms=RMS 13,CRL-2061;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0005722;is_hg38_lifted=no;narrowPeak_filter=qValueLog10 system_category Muscular life_stage Child track_name ENCODE SJCRH30 (repl. 1, 2) Histone ChIP-seq H3K27ac replicated peaks (narrowPeak) [Experiment: ENCSR769CSE] [Life stage: Child] [Histone ChIP-seq peaks]
H3K27ac • CD4+ alpha-beta T cell NGENCEFVQ65NR4 • ENCODE22955616 | 41168159 | 31713622 Histone ChIP-seq CD4+ alpha-beta T cell Histone Show metadata Download track Track metadata identifier NGENCEFVQ65NR4 data_source ENCODE Download track Download number_of_intervals 36,898 bp_covered 40,689,181 output_type pseudoreplicated peaks genome_build hg38 cell_type CD4+ alpha-beta T cell biosample_type Primary cell biosample_term_id CL:0000624 tissue_category Blood encode_experiment_id ENCSR561KOM biological_replicate 1 technical_replicate 1_2 antibody H3K27ac assay Histone ChIP-seq file_format bed narrowPeak file_size 963,900 downloaded_date 06/12/2022 release_date 10/10/2020 date_added_to_filer 08/22/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF607WJD.bed.gz processed_file_md5 05dcdcc26fd3823a09783b3f7d16fa47 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF607WJD.bed.gz -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF607WJD.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF607WJD/@@download/ENCFF607WJD.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF607WJD.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 42a529c4000227f2b03d13bf13c8487a data_category Histone ChIP-seq peaks Genomic feature type Histone ChIP-seq H3K27ac pseudoreplicated peaks track_description version=2024;Biosample_summary=Homo sapiens CD4-positive, alpha-beta T cell male adult (21 years);Lab=John Stamatoyannopoulos, UW;ENCODE_internal_tags=RegulomeDB_2_2,ccre_inputv2,ENCYCLOPEDIAv2;Life_stage_age=adult 21 years;Reference=PMID:32728046;External_resources=GEO:GSM1220560,SCREEN-GRCh38:CD4-positive_helper_T_cell_male_adult_21_years;Project=Roadmap;Award=U01ES017156;Experiment_date_released=2013-07-31;Submitted_track_name=rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=CD4-positive, alpha-beta T cell;ENCODE_cell_slims=T cell,leukocyte,CD4+ T cell,hematopoietic cell;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=CD4-positive, alpha-beta T-cell,CD4-positive, alpha-beta T lymphocyte,CD4-positive, alpha-beta T-lymphocyte;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ENCODE.html;original_biosample_term_id=CL:0000624;is_hg38_lifted=no;narrowPeak_filter=qValueLog10 system_category Cardiovascular life_stage Adult track_name ENCODE CD4+ alpha-beta T cell (repl. 1) Histone ChIP-seq H3K27ac pseudoreplicated peaks (narrowPeak) [Experiment: ENCSR561KOM] [Life stage: Adult] [Histone ChIP-seq peaks]
H3K27ac • Spleen NGENCEGDO2Q6GY • ENCODE22955616 | 41168159 | 31713622 Histone ChIP-seq Spleen Histone Show metadata Download track Track metadata identifier NGENCEGDO2Q6GY data_source ENCODE Download track Download number_of_intervals 58,246 bp_covered 81,559,760 output_type pseudoreplicated peaks genome_build hg38 cell_type Spleen biosample_type Tissue biosample_term_id UBERON:0002106 tissue_category Immune Organ encode_experiment_id ENCSR401KZW biological_replicate 1 technical_replicate 1_1, 1_2 antibody H3K27ac assay Histone ChIP-seq file_format bed narrowPeak file_size 1,423,316 downloaded_date 06/12/2022 release_date 07/23/2020 date_added_to_filer 08/22/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF112KGV.bed.gz processed_file_md5 31e3a111e4e5ec2a34ffd5364e61bf0a wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF112KGV.bed.gz -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF112KGV.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF112KGV/@@download/ENCFF112KGV.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF112KGV.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 7785659af5096d044242b058d624739d data_category Histone ChIP-seq peaks Genomic feature type Histone ChIP-seq H3K27ac pseudoreplicated peaks track_description version=2024;Biosample_summary=Homo sapiens spleen tissue male adult (26 years);Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_2_2;Life_stage_age=adult 26 years;Reference=NR;External_resources=GEO:GSE167722;Project=ENCODE;Award=UM1HG009390;Experiment_date_released=2020-09-03;Submitted_track_name=rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=spleen;ENCODE_cell_slims=NR;ENCODE_system_slims=digestive system,immune system;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.5.0 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ENCODE.html;original_biosample_term_id=UBERON:0002106;is_hg38_lifted=no;narrowPeak_filter=qValueLog10 system_category Lymphatic life_stage Adult track_name ENCODE Spleen (repl. 1) Histone ChIP-seq H3K27ac pseudoreplicated peaks (narrowPeak) [Experiment: ENCSR401KZW] [Life stage: Adult] [Histone ChIP-seq peaks]