CAMTA2 • K562 NGENCNIWVX2OAG • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq K562 TF Show metadata Download track Track metadata identifier NGENCNIWVX2OAG data_source ENCODE Download track Download number_of_intervals 2,330 bp_covered 742,735 output_type IDR thresholded peaks genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR336GFK biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CAMTA2 assay TF ChIP-seq file_format bed narrowPeak file_size 47,443 downloaded_date 06/12/2022 release_date 08/21/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF419EEN.bed.gz processed_file_md5 0507d28a3bff44e10a510a7050267404 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF419EEN.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF419EEN.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF419EEN/@@download/ENCFF419EEN.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF419EEN.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 e865dc1b7bebaae2dbaa35705236e774 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens K562 genetically modified (insertion) using CRISPR targeting H. sapiens CAMTA2;Lab=Michael Snyder, Stanford;ENCODE_internal_tags=RegulomeDB_2_2,RegulomeDB_2_1;Life_stage_age=adult 53 years;Reference=NR;External_resources=GEO:GSE208908;Project=ENCODE;Award=UM1HG009442;Experiment_date_released=2022-01-25,2020-06-30;Submitted_track_name=pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=hematopoietic cell,cancer cell,leukocyte;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=K-562, K562 cell,K-562 cell;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=[Method:CRISPR|Category:insertion];schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name ENCODE K562 (repl. 1, 2) TF ChIP-seq CAMTA2 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR336GFK] [Life stage: Adult] [TF ChIP-seq peaks]
CAMTA2 • K562 NGENCNNR2FT5EI • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq K562 TF Show metadata Download track Track metadata identifier NGENCNNR2FT5EI data_source ENCODE Download track Download number_of_intervals 2,396 bp_covered 763,855 output_type conservative IDR thresholded peaks genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR336GFK biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CAMTA2 assay TF ChIP-seq file_format bed narrowPeak file_size 48,789 downloaded_date 06/12/2022 release_date 08/21/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF975FJR.bed.gz processed_file_md5 5428adc649c277ef16660a3c55c86045 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF975FJR.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF975FJR.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF975FJR/@@download/ENCFF975FJR.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF975FJR.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 151d07391eb7d9000292a3525713f65b data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq conservative IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens K562 genetically modified (insertion) using CRISPR targeting H. sapiens CAMTA2;Lab=Michael Snyder, Stanford;ENCODE_internal_tags=RegulomeDB_2_2,RegulomeDB_2_1;Life_stage_age=adult 53 years;Reference=NR;External_resources=GEO:GSE208908;Project=ENCODE;Award=UM1HG009442;Experiment_date_released=2022-01-25,2020-06-30;Submitted_track_name=rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=hematopoietic cell,cancer cell,leukocyte;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=K-562, K562 cell,K-562 cell;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=[Method:CRISPR|Category:insertion];schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name ENCODE K562 (repl. 1, 2) TF ChIP-seq CAMTA2 conservative IDR thresholded peaks (narrowPeak) [Experiment: ENCSR336GFK] [Life stage: Adult] [TF ChIP-seq peaks]
CAMTA2 • K562 NGENCQ27VVK2TY • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq K562 TF Show metadata Download track Track metadata identifier NGENCQ27VVK2TY data_source ENCODE Download track Download number_of_intervals 862 bp_covered 259,911 output_type IDR thresholded peaks genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR336GFK biological_replicate 1 technical_replicate 1_1 antibody CAMTA2 assay TF ChIP-seq file_format bed narrowPeak file_size 17,698 downloaded_date 06/12/2022 release_date 08/21/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF995RAL.bed.gz processed_file_md5 173014738d7eec874825d0bc5bb2c140 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF995RAL.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF995RAL.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF995RAL/@@download/ENCFF995RAL.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF995RAL.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 36c5b6b2e33aa8b2d746b2aec81cc713 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens K562 genetically modified (insertion) using CRISPR targeting H. sapiens CAMTA2;Lab=Michael Snyder, Stanford;ENCODE_internal_tags=RegulomeDB_2_2,RegulomeDB_2_1;Life_stage_age=adult 53 years;Reference=NR;External_resources=GEO:GSE208908;Project=ENCODE;Award=UM1HG009442;Experiment_date_released=2022-01-25,2020-06-30;Submitted_track_name=rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=hematopoietic cell,cancer cell,leukocyte;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=K-562, K562 cell,K-562 cell;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=[Method:CRISPR|Category:insertion];schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name ENCODE K562 (repl. 1) TF ChIP-seq CAMTA2 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR336GFK] [Life stage: Adult] [TF ChIP-seq peaks]
CAMTA2 • HepG2 NGENCSN6XJV6KY • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq HepG2 TF Show metadata Download track Track metadata identifier NGENCSN6XJV6KY data_source ENCODE Download track Download number_of_intervals 8,250 bp_covered 4,282,142 output_type IDR thresholded peaks genome_build hg38 cell_type HepG2 biosample_type Cell line biosample_term_id EFO:0001187 tissue_category Liver encode_experiment_id ENCSR660ENW biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CAMTA2 assay TF ChIP-seq file_format bed narrowPeak file_size 162,710 downloaded_date 06/12/2022 release_date 07/04/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF305ZLM.bed.gz processed_file_md5 58ae0ddb2fe791ef190b422db9d457cb wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF305ZLM.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF305ZLM.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF305ZLM/@@download/ENCFF305ZLM.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF305ZLM.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 c62485c4dbaf10700725b7bf09f6c853 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens CAMTA2;Lab=Richard Myers, HAIB;ENCODE_internal_tags=RegulomeDB_2_2,RegulomeDB_2_1;Life_stage_age=child 15 years;Reference=NR;External_resources=GEO:GSE175043;Project=ENCODE;Award=UM1HG009411;Experiment_date_released=2020-07-08,2020-06-26;Submitted_track_name=pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=HepG2;ENCODE_cell_slims=epithelial cell,cancer cell;ENCODE_system_slims=exocrine system,endocrine system,digestive system;ENCODE_biosample_term_synonyms=Hep-G2,HepG2 cell;Analysis_title=ENCODE4 v1.4.0 GRCh38;GM=[Method:CRISPR|Category:insertion];schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001187;is_hg38_lifted=no system_category Digestive life_stage Child track_name ENCODE HepG2 (repl. 1, 2) TF ChIP-seq CAMTA2 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR660ENW] [Life stage: Child] [TF ChIP-seq peaks]
CAMTA2 • K562 NGENCUW6N4BADX • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq K562 TF Show metadata Download track Track metadata identifier NGENCUW6N4BADX data_source ENCODE Download track Download number_of_intervals 649 bp_covered 196,204 output_type IDR thresholded peaks genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR336GFK biological_replicate 2 technical_replicate 2_1 antibody CAMTA2 assay TF ChIP-seq file_format bed narrowPeak file_size 13,324 downloaded_date 06/12/2022 release_date 08/21/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF662RVT.bed.gz processed_file_md5 21ddd2dfceef23caae2b3f1ab3a81c0f wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF662RVT.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF662RVT.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF662RVT/@@download/ENCFF662RVT.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF662RVT.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 8c0d05e6c761d2ec4d2c4bb3067f7758 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens K562 genetically modified (insertion) using CRISPR targeting H. sapiens CAMTA2;Lab=Michael Snyder, Stanford;ENCODE_internal_tags=RegulomeDB_2_2,RegulomeDB_2_1;Life_stage_age=adult 53 years;Reference=NR;External_resources=GEO:GSE208908;Project=ENCODE;Award=UM1HG009442;Experiment_date_released=2022-01-25,2020-06-30;Submitted_track_name=rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=hematopoietic cell,cancer cell,leukocyte;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=K-562, K562 cell,K-562 cell;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=[Method:CRISPR|Category:insertion];schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name ENCODE K562 (repl. 2) TF ChIP-seq CAMTA2 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR336GFK] [Life stage: Adult] [TF ChIP-seq peaks]
CAMTA2 • HepG2 NGENCVZALDLO4T • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq HepG2 TF Show metadata Download track Track metadata identifier NGENCVZALDLO4T data_source ENCODE Download track Download number_of_intervals 5,026 bp_covered 2,605,662 output_type conservative IDR thresholded peaks genome_build hg38 cell_type HepG2 biosample_type Cell line biosample_term_id EFO:0001187 tissue_category Liver encode_experiment_id ENCSR660ENW biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CAMTA2 assay TF ChIP-seq file_format bed narrowPeak file_size 98,753 downloaded_date 06/12/2022 release_date 07/04/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF915FYQ.bed.gz processed_file_md5 755d64415526e68a27a0b06a875b2be5 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF915FYQ.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF915FYQ.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF915FYQ/@@download/ENCFF915FYQ.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF915FYQ.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 d41f2866f9ff6f416d2e5abac16ba2fd data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq conservative IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens CAMTA2;Lab=Richard Myers, HAIB;ENCODE_internal_tags=RegulomeDB_2_2,RegulomeDB_2_1;Life_stage_age=child 15 years;Reference=NR;External_resources=GEO:GSE175043;Project=ENCODE;Award=UM1HG009411;Experiment_date_released=2020-07-08,2020-06-26;Submitted_track_name=rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=HepG2;ENCODE_cell_slims=epithelial cell,cancer cell;ENCODE_system_slims=exocrine system,endocrine system,digestive system;ENCODE_biosample_term_synonyms=Hep-G2,HepG2 cell;Analysis_title=ENCODE4 v1.4.0 GRCh38;GM=[Method:CRISPR|Category:insertion];schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001187;is_hg38_lifted=no system_category Digestive life_stage Child track_name ENCODE HepG2 (repl. 1, 2) TF ChIP-seq CAMTA2 conservative IDR thresholded peaks (narrowPeak) [Experiment: ENCSR660ENW] [Life stage: Child] [TF ChIP-seq peaks]
CBFA2T2 • K562 NGENCGL5YBDDL6 • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq K562 TF Show metadata Download track Track metadata identifier NGENCGL5YBDDL6 data_source ENCODE Download track Download number_of_intervals 23,765 bp_covered 7,666,409 output_type IDR thresholded peaks genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR699PVC biological_replicate 1 technical_replicate 1_1 antibody CBFA2T2 assay TF ChIP-seq file_format bed narrowPeak file_size 444,504 downloaded_date 06/12/2022 release_date 12/02/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF909SEI.bed.gz processed_file_md5 516f0af54be719b82133498b1959cc98 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF909SEI.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF909SEI.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF909SEI/@@download/ENCFF909SEI.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF909SEI.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 dcce3a74c95173ee9c3a626727439f14 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens K562;Lab=Michael Snyder, Stanford;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,ENCYCLOPEDIAv2,RegulomeDB_2_1,RegulomeDB_2_2;Life_stage_age=adult 53 years;Reference=PMCID:PMC6724667;External_resources=GEO:GSE105711;Project=ENCODE;Award=U54HG006996;Experiment_date_released=2017-09-28,2016-11-01;Submitted_track_name=rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=hematopoietic cell,cancer cell,leukocyte;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=K-562, K562 cell,K-562 cell;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name ENCODE K562 (repl. 1) TF ChIP-seq CBFA2T2 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR699PVC] [Life stage: Adult] [TF ChIP-seq peaks]
CBFA2T2 • K562 NGENCN35HJV5UI • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq K562 TF Show metadata Download track Track metadata identifier NGENCN35HJV5UI data_source ENCODE Download track Download number_of_intervals 22,036 bp_covered 6,970,430 output_type IDR thresholded peaks genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR699PVC biological_replicate 2 technical_replicate 2_1 antibody CBFA2T2 assay TF ChIP-seq file_format bed narrowPeak file_size 412,587 downloaded_date 06/12/2022 release_date 12/02/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF973OYP.bed.gz processed_file_md5 bc4573f7d54a5f428a83de7c6c7680d6 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF973OYP.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF973OYP.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF973OYP/@@download/ENCFF973OYP.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF973OYP.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 18df05c1894937d1ecd38bfd93421799 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens K562;Lab=Michael Snyder, Stanford;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,ENCYCLOPEDIAv2,RegulomeDB_2_1,RegulomeDB_2_2;Life_stage_age=adult 53 years;Reference=PMCID:PMC6724667;External_resources=GEO:GSE105711;Project=ENCODE;Award=U54HG006996;Experiment_date_released=2017-09-28,2016-11-01;Submitted_track_name=rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=hematopoietic cell,cancer cell,leukocyte;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=K-562, K562 cell,K-562 cell;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name ENCODE K562 (repl. 2) TF ChIP-seq CBFA2T2 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR699PVC] [Life stage: Adult] [TF ChIP-seq peaks]
CBFA2T2 • K562 NGENCNDJDA5Z3H • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq K562 TF Show metadata Download track Track metadata identifier NGENCNDJDA5Z3H data_source ENCODE Download track Download number_of_intervals 29,809 bp_covered 9,888,327 output_type conservative IDR thresholded peaks genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR699PVC biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CBFA2T2 assay TF ChIP-seq file_format bed narrowPeak file_size 574,452 downloaded_date 06/12/2022 release_date 12/02/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF963TXY.bed.gz processed_file_md5 52f9b85df9712a5536fc0f7cc8afb327 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF963TXY.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF963TXY.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF963TXY/@@download/ENCFF963TXY.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF963TXY.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 264882e45d31ba7fc3bc2d5edf6d663e data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq conservative IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens K562;Lab=Michael Snyder, Stanford;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,ENCYCLOPEDIAv2,RegulomeDB_2_1,RegulomeDB_2_2;Life_stage_age=adult 53 years;Reference=PMCID:PMC6724667;External_resources=GEO:GSE105711;Project=ENCODE;Award=U54HG006996;Experiment_date_released=2017-09-28,2016-11-01;Submitted_track_name=rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=hematopoietic cell,cancer cell,leukocyte;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=K-562, K562 cell,K-562 cell;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name ENCODE K562 (repl. 1, 2) TF ChIP-seq CBFA2T2 conservative IDR thresholded peaks (narrowPeak) [Experiment: ENCSR699PVC] [Life stage: Adult] [TF ChIP-seq peaks]
CBFA2T2 • K562 NGENCNKM6FWJ5W • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq K562 TF Show metadata Download track Track metadata identifier NGENCNKM6FWJ5W data_source ENCODE Download track Download number_of_intervals 29,691 bp_covered 9,840,547 output_type IDR thresholded peaks genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR699PVC biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CBFA2T2 assay TF ChIP-seq file_format bed narrowPeak file_size 569,965 downloaded_date 06/12/2022 release_date 12/02/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF620AIF.bed.gz processed_file_md5 225eec3bfc152f73fb5031b6f83cf980 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF620AIF.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF620AIF.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF620AIF/@@download/ENCFF620AIF.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF620AIF.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 7341f74d91ed8acd5efc923157d54222 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens K562;Lab=Michael Snyder, Stanford;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,ENCYCLOPEDIAv2,RegulomeDB_2_1,RegulomeDB_2_2;Life_stage_age=adult 53 years;Reference=PMCID:PMC6724667;External_resources=GEO:GSE105711;Project=ENCODE;Award=U54HG006996;Experiment_date_released=2017-09-28,2016-11-01;Submitted_track_name=pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=hematopoietic cell,cancer cell,leukocyte;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=K-562, K562 cell,K-562 cell;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name ENCODE K562 (repl. 1, 2) TF ChIP-seq CBFA2T2 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR699PVC] [Life stage: Adult] [TF ChIP-seq peaks]
CBFA2T2 • K562 NGFTB2VC32C652 • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTB2VC32C652 data_source Factorbook Download track Download number_of_intervals 11,188 bp_covered 212,572 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR699PVC biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CBFA2T2 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 209,193 downloaded_date 07/10/2024 release_date 09/28/2017 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF859PDK_CTGBNDRRSRSWGATARNR_sorted.bed.gz processed_file_md5 9517205913fc7632e4db682cec1ddc1e wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF859PDK_CTGBNDRRSRSWGATARNR_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF859PDK_CTGBNDRRSRSWGATARNR_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF859PDK_CTGBNDRRSRSWGATARNR.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF859PDK_CTGBNDRRSRSWGATARNR.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 22c211b0af0c3ee1794e20e066742c98 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF859PDK;ENCODE_bigBed_id=ENCFF620AIF;PMID=34755879;Motif_sequence=CTGBNDRRSRSWGATARNR;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding CBFA2T2 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR699PVC] [Life stage: Adult] [TFBS]
CBFA2T2 • K562 NGFTBEIAGTGV7R • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBEIAGTGV7R data_source Factorbook Download track Download number_of_intervals 10,495 bp_covered 83,960 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR699PVC biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CBFA2T2 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 104,722 downloaded_date 07/10/2024 release_date 09/28/2017 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF859PDK_WGCAGMTG_sorted.bed.gz processed_file_md5 e1020dab552c83d70f5d49c0a259d294 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF859PDK_WGCAGMTG_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF859PDK_WGCAGMTG_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF859PDK_WGCAGMTG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF859PDK_WGCAGMTG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 cd9d1a705a000857c8aa81688164ff98 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF859PDK;ENCODE_bigBed_id=ENCFF620AIF;PMID=34755879;Motif_sequence=WGCAGMTG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding CBFA2T2 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR699PVC] [Life stage: Adult] [TFBS]
CBFA2T2 • K562 NGFTBFY2VM6YIB • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBFY2VM6YIB data_source Factorbook Download track Download number_of_intervals 8,396 bp_covered 125,940 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR699PVC biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CBFA2T2 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 137,807 downloaded_date 07/10/2024 release_date 09/28/2017 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF859PDK_SYSNGGTCACGTGAC_sorted.bed.gz processed_file_md5 8c18d47c46c2eb9e2b0b7ce9eb8a0112 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF859PDK_SYSNGGTCACGTGAC_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF859PDK_SYSNGGTCACGTGAC_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF859PDK_SYSNGGTCACGTGAC.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF859PDK_SYSNGGTCACGTGAC.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 05682d5b10b4c0aec54299357c181168 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF859PDK;ENCODE_bigBed_id=ENCFF620AIF;PMID=34755879;Motif_sequence=SYSNGGTCACGTGAC;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding CBFA2T2 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR699PVC] [Life stage: Adult] [TFBS]
CBFA2T2 • K562 NGFTBZLNPHLF7H • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBZLNPHLF7H data_source Factorbook Download track Download number_of_intervals 9,496 bp_covered 75,968 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR699PVC biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CBFA2T2 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 105,558 downloaded_date 07/10/2024 release_date 09/28/2017 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF859PDK_CTTATCTS_sorted.bed.gz processed_file_md5 9a009c67fe8037d25abbd750f47d4536 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF859PDK_CTTATCTS_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF859PDK_CTTATCTS_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF859PDK_CTTATCTS.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF859PDK_CTTATCTS.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 b5ccdb12e9aff8921467d17a42eb92b3 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF859PDK;ENCODE_bigBed_id=ENCFF620AIF;PMID=34755879;Motif_sequence=CTTATCTS;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding CBFA2T2 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR699PVC] [Life stage: Adult] [TFBS]
CBFA2T3 • K562 NGENC3SX25VNWN • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq K562 TF Show metadata Download track Track metadata identifier NGENC3SX25VNWN data_source ENCODE Download track Download number_of_intervals 49,658 bp_covered 17,731,944 output_type IDR thresholded peaks genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR697YLJ biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CBFA2T3 assay TF ChIP-seq file_format bed narrowPeak file_size 946,414 downloaded_date 06/12/2022 release_date 12/02/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF673OEZ.bed.gz processed_file_md5 f9f7755021608648b1858088d5a6068d wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF673OEZ.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF673OEZ.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF673OEZ/@@download/ENCFF673OEZ.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF673OEZ.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 7a7ff2bad4405857a9071106e12d02e9 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens K562;Lab=Michael Snyder, Stanford;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,ENCYCLOPEDIAv2,RegulomeDB_2_1,RegulomeDB_2_2;Life_stage_age=adult 53 years;Reference=PMCID:PMC6724667;External_resources=GEO:GSE105706;Project=ENCODE;Award=U54HG006996;Experiment_date_released=2017-09-28,2016-11-01;Submitted_track_name=pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=hematopoietic cell,cancer cell,leukocyte;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=K-562, K562 cell,K-562 cell;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name ENCODE K562 (repl. 1, 2) TF ChIP-seq CBFA2T3 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR697YLJ] [Life stage: Adult] [TF ChIP-seq peaks]
CBFA2T3 • K562 NGENC7AYHDROII • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq K562 TF Show metadata Download track Track metadata identifier NGENC7AYHDROII data_source ENCODE Download track Download number_of_intervals 40,957 bp_covered 14,024,814 output_type IDR thresholded peaks genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR697YLJ biological_replicate 1 technical_replicate 1_1 antibody CBFA2T3 assay TF ChIP-seq file_format bed narrowPeak file_size 756,602 downloaded_date 06/12/2022 release_date 12/02/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF494LCY.bed.gz processed_file_md5 11f82522932288b4af8ea59e11f04b9b wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF494LCY.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF494LCY.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF494LCY/@@download/ENCFF494LCY.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF494LCY.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 2e7f7e64691c4be9ed6dead48525b515 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens K562;Lab=Michael Snyder, Stanford;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,ENCYCLOPEDIAv2,RegulomeDB_2_1,RegulomeDB_2_2;Life_stage_age=adult 53 years;Reference=PMCID:PMC6724667;External_resources=GEO:GSE105706;Project=ENCODE;Award=U54HG006996;Experiment_date_released=2017-09-28,2016-11-01;Submitted_track_name=rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=hematopoietic cell,cancer cell,leukocyte;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=K-562, K562 cell,K-562 cell;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name ENCODE K562 (repl. 1) TF ChIP-seq CBFA2T3 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR697YLJ] [Life stage: Adult] [TF ChIP-seq peaks]
CBFA2T3 • K562 NGENC7V7KVVG25 • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq K562 TF Show metadata Download track Track metadata identifier NGENC7V7KVVG25 data_source ENCODE Download track Download number_of_intervals 48,862 bp_covered 17,440,040 output_type conservative IDR thresholded peaks genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR697YLJ biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CBFA2T3 assay TF ChIP-seq file_format bed narrowPeak file_size 934,312 downloaded_date 06/12/2022 release_date 12/02/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF117ISG.bed.gz processed_file_md5 14ad6a17dd5de442194f79c5c5eb904f wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF117ISG.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF117ISG.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF117ISG/@@download/ENCFF117ISG.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF117ISG.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 7a78decbb76cfe6e107447cfcc518ac2 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq conservative IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens K562;Lab=Michael Snyder, Stanford;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,ENCYCLOPEDIAv2,RegulomeDB_2_1,RegulomeDB_2_2;Life_stage_age=adult 53 years;Reference=PMCID:PMC6724667;External_resources=GEO:GSE105706;Project=ENCODE;Award=U54HG006996;Experiment_date_released=2017-09-28,2016-11-01;Submitted_track_name=rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=hematopoietic cell,cancer cell,leukocyte;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=K-562, K562 cell,K-562 cell;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name ENCODE K562 (repl. 1, 2) TF ChIP-seq CBFA2T3 conservative IDR thresholded peaks (narrowPeak) [Experiment: ENCSR697YLJ] [Life stage: Adult] [TF ChIP-seq peaks]
CBFA2T3 • K562 NGENCJTIOASFJU • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq K562 TF Show metadata Download track Track metadata identifier NGENCJTIOASFJU data_source ENCODE Download track Download number_of_intervals 34,667 bp_covered 12,304,842 output_type IDR thresholded peaks genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR697YLJ biological_replicate 2 technical_replicate 2_1 antibody CBFA2T3 assay TF ChIP-seq file_format bed narrowPeak file_size 641,217 downloaded_date 06/12/2022 release_date 12/02/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF192YJN.bed.gz processed_file_md5 7c15ec51128a37d14414a62f0307a928 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF192YJN.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF192YJN.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF192YJN/@@download/ENCFF192YJN.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF192YJN.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 0972a97362f4924d4bb5a1043a122c7b data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens K562;Lab=Michael Snyder, Stanford;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,ENCYCLOPEDIAv2,RegulomeDB_2_1,RegulomeDB_2_2;Life_stage_age=adult 53 years;Reference=PMCID:PMC6724667;External_resources=GEO:GSE105706;Project=ENCODE;Award=U54HG006996;Experiment_date_released=2017-09-28,2016-11-01;Submitted_track_name=rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=hematopoietic cell,cancer cell,leukocyte;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=K-562, K562 cell,K-562 cell;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name ENCODE K562 (repl. 2) TF ChIP-seq CBFA2T3 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR697YLJ] [Life stage: Adult] [TF ChIP-seq peaks]
CBFA2T3 • K562 NGFTB2CQBK6DGH • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTB2CQBK6DGH data_source Factorbook Download track Download number_of_intervals 61 bp_covered 1,830 output_type transcription factor binding sites significant genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR697YLJ biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CBFA2T3 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 1,255 downloaded_date 07/10/2024 release_date 09/28/2017 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF082DOH_CDGYCDRCTBTTAGCWTCCSTWTCTYAGTG_filtered.bed.gz processed_file_md5 d9941be1b2585cf1a62c129c8ff649a2 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF082DOH_CDGYCDRCTBTTAGCWTCCSTWTCTYAGTG_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF082DOH_CDGYCDRCTBTTAGCWTCCSTWTCTYAGTG_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF082DOH_CDGYCDRCTBTTAGCWTCCSTWTCTYAGTG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF082DOH_CDGYCDRCTBTTAGCWTCCSTWTCTYAGTG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 f464ddac6171000ea545f0bc0b4c7993 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF082DOH;ENCODE_bigBed_id=ENCFF673OEZ;PMID=34755879;Motif_sequence=CDGYCDRCTBTTAGCWTCCSTWTCTYAGTG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding CBFA2T3 transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR697YLJ] [Life stage: Adult] [TFBS]
CBFA2T3 • K562 NGFTBCNXPEBMWR • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBCNXPEBMWR data_source Factorbook Download track Download number_of_intervals 16,464 bp_covered 131,712 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR697YLJ biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CBFA2T3 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 179,471 downloaded_date 07/10/2024 release_date 09/28/2017 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF082DOH_CTTATCWG_sorted.bed.gz processed_file_md5 36c5eaf6cb64f9bdfb8b8d451a924a1c wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF082DOH_CTTATCWG_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF082DOH_CTTATCWG_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF082DOH_CTTATCWG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF082DOH_CTTATCWG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 85f3b439ba3ebb8b423934289665fa8a data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF082DOH;ENCODE_bigBed_id=ENCFF673OEZ;PMID=34755879;Motif_sequence=CTTATCWG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding CBFA2T3 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR697YLJ] [Life stage: Adult] [TFBS]