H3K27ac • Sigmoid colon NGENCXWITLTT6S • ENCODE PMID: 22955616 | 41168159 | 31713622 Histone ChIP-seq Sigmoid colon Digestive • Child Histone Show metadata Download track Track metadata identifier NGENCXWITLTT6S data_source ENCODE Download track Download number_of_intervals 122,289 bp_covered 74,897,128 output_type pseudoreplicated peaks genome_build hg38 cell_type Sigmoid colon biosample_type Tissue biosample_term_id UBERON:0001159 tissue_category Digestive encode_experiment_id ENCSR213SMK biological_replicate 1 technical_replicate 1_1 antibody H3K27ac assay Histone ChIP-seq file_format bed narrowPeak file_size 3,122,619 downloaded_date 06/12/2022 release_date 12/11/2020 date_added_to_filer 08/22/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF561OXZ.bed.gz processed_file_md5 584a60d7c3db7ff6e6024405524e1c41 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF561OXZ.bed.gz -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF561OXZ.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF561OXZ/@@download/ENCFF561OXZ.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF561OXZ.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 26325d882694ae8ff8a2e0b2af0a49e2 data_category Histone ChIP-seq peaks Genomic feature type Histone ChIP-seq H3K27ac pseudoreplicated peaks track_description version=2024;Biosample_summary=Homo sapiens sigmoid colon tissue male child (3 years);Lab=Bing Ren, UCSD;ENCODE_internal_tags=ENCYCLOPEDIAv1,RegulomeDB_2_2,ccre_inputv2,ENCYCLOPEDIAv2;Life_stage_age=child 3 years;Reference=PMID:32728046;External_resources=GEO:GSM1582457,SCREEN-GRCh38:sigmoid_colon_male_child_3_years,GEO:GSM915331;Project=Roadmap;Award=U01ES017166;Experiment_date_released=2013-07-31;Submitted_track_name=rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=sigmoid colon;ENCODE_cell_slims=NR;ENCODE_system_slims=digestive system;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ENCODE.html;original_biosample_term_id=UBERON:0001159;is_hg38_lifted=no;narrowPeak_filter=qValueLog10 system_category Digestive life_stage Child track_name ENCODE Sigmoid colon (repl. 1) Histone ChIP-seq H3K27ac pseudoreplicated peaks (narrowPeak) [Experiment: ENCSR213SMK] [Life stage: Child] [Histone ChIP-seq peaks]
H3K27ac • Testis NGENCXWLEKNQEB • ENCODE PMID: 22955616 | 41168159 | 31713622 Histone ChIP-seq Testis Male Reproductive • Adult Histone Show metadata Download track Track metadata identifier NGENCXWLEKNQEB data_source ENCODE Download track Download number_of_intervals 60,672 bp_covered 88,124,121 output_type pseudoreplicated peaks genome_build hg38 cell_type Testis biosample_type Tissue biosample_term_id UBERON:0000473 tissue_category Male Reproductive encode_experiment_id ENCSR954IGQ biological_replicate 1 technical_replicate 1_1, 1_2 antibody H3K27ac assay Histone ChIP-seq file_format bed narrowPeak file_size 1,563,361 downloaded_date 06/12/2022 release_date 09/21/2020 date_added_to_filer 08/22/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF032SJV.bed.gz processed_file_md5 ec08cb79959e9bfe34c4ce7227714bbe wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF032SJV.bed.gz -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF032SJV.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF032SJV/@@download/ENCFF032SJV.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF032SJV.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 128bf7cd91eadbd91891b5e6401f1f5f data_category Histone ChIP-seq peaks Genomic feature type Histone ChIP-seq H3K27ac pseudoreplicated peaks track_description version=2024;Biosample_summary=Homo sapiens testis tissue male adult (54 years);Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_2_2,ENTEx;Life_stage_age=adult 54 years;Reference=NR;External_resources=GEO:GSE143116;Project=ENCODE;Award=UM1HG009390;Experiment_date_released=2019-08-01,2019-02-08;Submitted_track_name=rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=testis;ENCODE_cell_slims=NR;ENCODE_system_slims=reproductive system;ENCODE_biosample_term_synonyms=gonad of male reproductive system,male gonad,gonad of male genitalia,testicle;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ENCODE.html;original_biosample_term_id=UBERON:0000473;is_hg38_lifted=no;narrowPeak_filter=qValueLog10 system_category Reproductive life_stage Adult track_name ENCODE Testis (repl. 1) Histone ChIP-seq H3K27ac pseudoreplicated peaks (narrowPeak) [Experiment: ENCSR954IGQ] [Life stage: Adult] [Histone ChIP-seq peaks]
H3K27ac • Brain NGENCXYDGMBFSK • ENCODE PMID: 22955616 | 41168159 | 31713622 Mint-ChIP-seq Brain Brain • Embryonic Histone Show metadata Download track Track metadata identifier NGENCXYDGMBFSK data_source ENCODE Download track Download number_of_intervals 114,277 bp_covered 102,548,894 output_type replicated peaks genome_build hg38 cell_type Brain biosample_type Organoid biosample_term_id UBERON:0000955 tissue_category Brain encode_experiment_id ENCSR408CSV biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody H3K27ac assay Mint-ChIP-seq file_format bed narrowPeak file_size 3,419,942 downloaded_date 06/12/2022 release_date 05/11/2021 date_added_to_filer 08/22/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/Mint-ChIP-seq/narrowpeak/hg38/ENCFF844IWM.bed.gz processed_file_md5 b764d1b34135f6fb490c5f752b1ea00e wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Mint-ChIP-seq/narrowpeak/hg38/ENCFF844IWM.bed.gz -P GADB/Annotationtracks/ENCODE/data/Mint-ChIP-seq/narrowpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Mint-ChIP-seq/narrowpeak/hg38/ENCFF844IWM.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/Mint-ChIP-seq/narrowpeak/hg38/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF844IWM/@@download/ENCFF844IWM.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF844IWM.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 662d521f9a960e22f376ac38b382dd24 data_category Histone ChIP-seq peaks Genomic feature type Mint-ChIP-seq H3K27ac replicated peaks track_description version=2024;Biosample_summary=Homo sapiens brain organoid, 30 days post differentiation;Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=NR;Life_stage_age=embryonic 5 days;Reference=NR;External_resources=GEO:GSE177130;Project=ENCODE;Award=UM1HG009390;Experiment_date_released=2021-05-14,2020-07-06;Submitted_track_name=rep1_vs_rep2.overlap.bfilt.narrowPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=brain;ENCODE_cell_slims=NR;ENCODE_system_slims=central nervous system;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.8.0 GRCh38;GM=NR;Bio_rep=1, 2, 3;Tech_rep=1_1, 1_2, 2_1, 2_2, 3_1, 3_2;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ENCODE.html;original_biosample_term_id=UBERON:0000955;is_hg38_lifted=no;narrowPeak_filter=qValueLog10 system_category Nervous life_stage Embryonic track_name ENCODE Brain (repl. 1, 2) Mint-ChIP-seq H3K27ac-histone-mark replicated peaks (narrowPeak) [Experiment: ENCSR408CSV] [Life stage: Embryonic] [Histone ChIP-seq peaks]
H3K27ac • Middle frontal area BA46 NGENCXYUFRGBLR • ENCODE PMID: 22955616 | 41168159 | 31713622 Histone ChIP-seq Middle frontal area BA46 Brain • Adult Histone Show metadata Download track Track metadata identifier NGENCXYUFRGBLR data_source ENCODE Download track Download number_of_intervals 50,407 bp_covered 62,950,742 output_type pseudoreplicated peaks genome_build hg38 cell_type Middle frontal area BA46 biosample_type Tissue biosample_term_id UBERON:0006483 tissue_category Brain encode_experiment_id ENCSR498NGT biological_replicate 1 technical_replicate 1_1, 1_2 antibody H3K27ac assay Histone ChIP-seq file_format bed narrowPeak file_size 1,131,265 downloaded_date 06/12/2022 release_date 09/16/2021 date_added_to_filer 08/22/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF444PYL.bed.gz processed_file_md5 9806447ae25f47cfabd176ad141d5756 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF444PYL.bed.gz -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF444PYL.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF444PYL/@@download/ENCFF444PYL.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF444PYL.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 ada9cf171e014dd8c4c2960051836b3e data_category Histone ChIP-seq peaks Genomic feature type Histone ChIP-seq H3K27ac pseudoreplicated peaks track_description version=2024;Biosample_summary=Homo sapiens with Alzheimer's disease| dorsolateral prefrontal cortex tissue female adult (85 years);Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RushAD,RegulomeDB_2_2;Life_stage_age=adult 85 years;Reference=NR;External_resources=GEO:GSE187499;Project=ENCODE;Award=UM1HG009390;Experiment_date_released=2021-09-21;Submitted_track_name=rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=dorsolateral prefrontal cortex;ENCODE_cell_slims=NR;ENCODE_system_slims=central nervous system;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.8.0 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ENCODE.html;original_biosample_term_id=UBERON:0006483;is_hg38_lifted=no;narrowPeak_filter=qValueLog10 system_category Nervous life_stage Adult track_name ENCODE Middle frontal area BA46 (repl. 1) Histone ChIP-seq H3K27ac pseudoreplicated peaks (narrowPeak) [Experiment: ENCSR498NGT] [Life stage: Adult] [Histone ChIP-seq peaks]
H3K27ac • Right ventricle NGENCXZ43A3I76 • ENCODE PMID: 22955616 | 41168159 | 31713622 Histone ChIP-seq Right ventricle Heart • Adult Histone Show metadata Download track Track metadata identifier NGENCXZ43A3I76 data_source ENCODE Download track Download number_of_intervals 64,064 bp_covered 96,454,590 output_type pseudoreplicated peaks genome_build hg38 cell_type Right ventricle biosample_type Tissue biosample_term_id UBERON:0002080 tissue_category Heart encode_experiment_id ENCSR772ABL biological_replicate 1 technical_replicate 1_1, 1_2 antibody H3K27ac assay Histone ChIP-seq file_format bed narrowPeak file_size 1,724,973 downloaded_date 06/12/2022 release_date 09/17/2021 date_added_to_filer 08/22/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF154XAB.bed.gz processed_file_md5 e479025e92cf9d5e332469ac07fc72b9 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF154XAB.bed.gz -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF154XAB.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF154XAB/@@download/ENCFF154XAB.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF154XAB.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 51b269ecece2b7701dbd30ce6dc5d184 data_category Histone ChIP-seq peaks Genomic feature type Histone ChIP-seq H3K27ac pseudoreplicated peaks track_description version=2024;Biosample_summary=Homo sapiens heart right ventricle tissue female adult (59 years);Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_2_2;Life_stage_age=adult 59 years;Reference=NR;External_resources=GEO:GSE187895;Project=ENCODE;Award=UM1HG009390;Experiment_date_released=2021-09-21;Submitted_track_name=rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=heart right ventricle;ENCODE_cell_slims=NR;ENCODE_system_slims=circulatory system;ENCODE_biosample_term_synonyms=right ventricle,cardiac right ventricle,right ventricle of heart;Analysis_title=ENCODE4 v1.8.0 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ENCODE.html;original_biosample_term_id=UBERON:0002080;is_hg38_lifted=no;narrowPeak_filter=qValueLog10 system_category Cardiovascular life_stage Adult track_name ENCODE Right ventricle (repl. 1) Histone ChIP-seq H3K27ac pseudoreplicated peaks (narrowPeak) [Experiment: ENCSR772ABL] [Life stage: Adult] [Histone ChIP-seq peaks]
H3K27ac • Ovary NGENCY2VOAMM7N • ENCODE PMID: 22955616 | 41168159 | 31713622 Histone ChIP-seq Ovary Female Reproductive • Adult Histone Show metadata Download track Track metadata identifier NGENCY2VOAMM7N data_source ENCODE Download track Download number_of_intervals 40,816 bp_covered 56,212,201 output_type pseudoreplicated peaks genome_build hg38 cell_type Ovary biosample_type Tissue biosample_term_id NCIT:C12404 tissue_category Female Reproductive encode_experiment_id ENCSR268JQE biological_replicate 1 technical_replicate 1_1 antibody H3K27ac assay Histone ChIP-seq file_format bed narrowPeak file_size 1,107,340 downloaded_date 05/15/2024 release_date 02/01/2023 date_added_to_filer 08/22/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF023MAH.bed.gz processed_file_md5 30a99e7597950823f67740a3b228deb5 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF023MAH.bed.gz -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF023MAH.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF023MAH/@@download/ENCFF023MAH.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF023MAH.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 cdb01df13e9368cca0edfa501e02dc13 data_category Histone ChIP-seq peaks Genomic feature type Histone ChIP-seq H3K27ac pseudoreplicated peaks track_description version=2024;Biosample_summary=Homo sapiens ovary tissue female adult (30 years);Lab=Bing Ren, UCSD;ENCODE_internal_tags=ccre_inputv2,ccre_inputv1,ENCYCLOPEDIAv1,ENCYCLOPEDIAv2;Life_stage_age=adult 30 years;Reference=PMID:32728046;External_resources=GEO:GSM1582451,SCREEN-GRCh38:ovary_female_adult_30_years,GEO:GSM956009;Project=Roadmap;Award=U01ES017166;Experiment_date_released=2013-07-31,2023-01-31;Submitted_track_name=rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=ovary;ENCODE_cell_slims=NR;ENCODE_system_slims=reproductive system;ENCODE_biosample_term_synonyms=gonada of female reproductive system,female organism reproductive system gonada,gonad of genitalia of female organism,female reproductive system gonad,reproductive system of female organism gonad,gonad of female organism reproductive system,genitalia of female organism gonada,female gonad,gonada of female organism reproductive system,animal ovary,reproductive system of female organism gonada,gonad of female reproductive system,gonada of genitalia of female organism,genitalia of female organism gonad,female organism genitalia gonada,gonad of female organism genitalia,female reproductive system gonada,female organism reproductive system gonad,female organism genitalia gonad,gonada of reproductive system of female organism,gonada of female organism genitalia,gonad of reproductive system of female organism,ovum-producing ovary;Analysis_title=ENCODE4 v1.8.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ENCODE.html;original_biosample_term_id=UBERON:0000992;is_hg38_lifted=no;narrowPeak_filter=qValueLog10 system_category Reproductive life_stage Adult track_name ENCODE Ovary (repl. 1) Histone ChIP-seq H3K27ac pseudoreplicated peaks (narrowPeak) [Experiment: ENCSR268JQE] [Life stage: Adult] [Histone ChIP-seq peaks]
H3K27ac • BLaER1 NGENCY4MFC65BK • ENCODE PMID: 22955616 | 41168159 | 31713622 Histone ChIP-seq BLaER1 Blood • Unknown Histone Show metadata Download track Track metadata identifier NGENCY4MFC65BK data_source ENCODE Download track Download number_of_intervals 59,475 bp_covered 113,769,320 output_type pseudoreplicated peaks genome_build hg38 cell_type BLaER1 biosample_type Cell line biosample_term_id EFO:0030018 tissue_category Blood encode_experiment_id ENCSR938FQG biological_replicate 1 technical_replicate 1_1 antibody H3K27ac assay Histone ChIP-seq file_format bed narrowPeak file_size 1,663,610 downloaded_date 05/15/2024 release_date 02/16/2023 date_added_to_filer 08/22/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF160ZTI.bed.gz processed_file_md5 0d53085344516345868d17892b52ea92 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF160ZTI.bed.gz -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF160ZTI.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF160ZTI/@@download/ENCFF160ZTI.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF160ZTI.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 ea1374875b70265113e984667bd69eb5 data_category Histone ChIP-seq peaks Genomic feature type Histone ChIP-seq H3K27ac pseudoreplicated peaks track_description version=2024;Biosample_summary=Homo sapiens BLaER1 9 hours after the sample was treated with 100 nM 17_-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1;Lab=Roderic Guigo, CRG;ENCODE_internal_tags=RegulomeDB_2_2;Life_stage_age=NR;Reference=NR;External_resources=GEO:GSE258405;Project=community;Award=ERC-2011-AdG-294653-RNA-MAPS;Experiment_date_released=2022-05-10;Submitted_track_name=rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=BLaER1;ENCODE_cell_slims=NR;ENCODE_system_slims=immune system,skeletal system;ENCODE_biosample_term_synonyms=B cell Leukemia C/EBPalphaER clone 1;Analysis_title=ENCODE4 v1.8.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0030018;is_hg38_lifted=no;narrowPeak_filter=qValueLog10 system_category Cardiovascular life_stage Unknown track_name ENCODE BLaER1 (repl. 1) Histone ChIP-seq H3K27ac pseudoreplicated peaks (narrowPeak) [Experiment: ENCSR938FQG] [Histone ChIP-seq peaks]
H3K27ac • Middle frontal area BA46 NGENCY4PNP3TWG • ENCODE PMID: 22955616 | 41168159 | 31713622 Histone ChIP-seq Middle frontal area BA46 Brain • Adult Histone Show metadata Download track Track metadata identifier NGENCY4PNP3TWG data_source ENCODE Download track Download number_of_intervals 45,326 bp_covered 59,540,925 output_type pseudoreplicated peaks genome_build hg38 cell_type Middle frontal area BA46 biosample_type Tissue biosample_term_id UBERON:0006483 tissue_category Brain encode_experiment_id ENCSR136KIM biological_replicate 1 technical_replicate 1_1, 1_2 antibody H3K27ac assay Histone ChIP-seq file_format bed narrowPeak file_size 1,071,011 downloaded_date 06/12/2022 release_date 12/14/2021 date_added_to_filer 08/22/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF986PCC.bed.gz processed_file_md5 ffb4cef7b2486b2ac7af8c6dd85cf319 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF986PCC.bed.gz -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF986PCC.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF986PCC/@@download/ENCFF986PCC.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF986PCC.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 43dbd3bdae1de2db02c3ccdbaeda05b4 data_category Histone ChIP-seq peaks Genomic feature type Histone ChIP-seq H3K27ac pseudoreplicated peaks track_description version=2024;Biosample_summary=Homo sapiens with mild cognitive impairment| dorsolateral prefrontal cortex tissue male adult (90 or above years);Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RushAD,RegulomeDB_2_2;Life_stage_age=adult 90 or above years;Reference=NR;External_resources=GEO:GSE208952;Project=ENCODE;Award=UM1HG009390;Experiment_date_released=2022-01-06,2021-09-21;Submitted_track_name=rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=dorsolateral prefrontal cortex;ENCODE_cell_slims=NR;ENCODE_system_slims=central nervous system;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.8.0 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ENCODE.html;original_biosample_term_id=UBERON:0006483;is_hg38_lifted=no;narrowPeak_filter=qValueLog10 system_category Nervous life_stage Adult track_name ENCODE Middle frontal area BA46 (repl. 1) Histone ChIP-seq H3K27ac pseudoreplicated peaks (narrowPeak) [Experiment: ENCSR136KIM] [Life stage: Adult] [Histone ChIP-seq peaks]
H3K27ac • CD4+ alpha-beta memory T cell NGENCY762XPFGY • ENCODE PMID: 22955616 | 41168159 | 31713622 Mint-ChIP-seq CD4+ alpha-beta memory T cell Blood • Adult Histone Show metadata Download track Track metadata identifier NGENCY762XPFGY data_source ENCODE Download track Download number_of_intervals 86,278 bp_covered 136,838,191 output_type pseudoreplicated peaks genome_build hg38 cell_type CD4+ alpha-beta memory T cell biosample_type Primary cell biosample_term_id CL:0000897 tissue_category Blood encode_experiment_id ENCSR245HFY biological_replicate 1 technical_replicate 1_1, 1_2 antibody H3K27ac assay Mint-ChIP-seq file_format bed narrowPeak file_size 2,343,648 downloaded_date 06/12/2022 release_date 05/05/2021 date_added_to_filer 08/22/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/Mint-ChIP-seq/narrowpeak/hg38/ENCFF104OLX.bed.gz processed_file_md5 ecad40457d9b17467914fe59dbfc04c4 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Mint-ChIP-seq/narrowpeak/hg38/ENCFF104OLX.bed.gz -P GADB/Annotationtracks/ENCODE/data/Mint-ChIP-seq/narrowpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Mint-ChIP-seq/narrowpeak/hg38/ENCFF104OLX.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/Mint-ChIP-seq/narrowpeak/hg38/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF104OLX/@@download/ENCFF104OLX.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF104OLX.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 87ea1d1bfda1bae4e8c6cc8ec7bd1a98 data_category Histone ChIP-seq peaks Genomic feature type Mint-ChIP-seq H3K27ac pseudoreplicated peaks track_description version=2024;Biosample_summary=Homo sapiens CD4-positive, alpha-beta memory T cell male adult (43 years);Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=NR;Life_stage_age=adult 43 years;Reference=NR;External_resources=GEO:GSE176857;Project=ENCODE;Award=UM1HG009390;Experiment_date_released=2020-09-06,2020-08-04;Submitted_track_name=rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=CD4-positive, alpha-beta memory T cell;ENCODE_cell_slims=T cell,leukocyte,CD4+ T cell,hematopoietic cell;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=CD4-positive, alpha-beta memory T lymphocyte,CD4-positive, alpha-beta memory T-lymphocyte,CD4-positive, alpha-beta memory T-cell;Analysis_title=ENCODE4 v1.8.0 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ENCODE.html;original_biosample_term_id=NTR:0000498;is_hg38_lifted=no;narrowPeak_filter=qValueLog10 system_category Cardiovascular life_stage Adult track_name ENCODE CD4+ alpha-beta memory T cell (repl. 1) Mint-ChIP-seq H3K27ac-histone-mark pseudoreplicated peaks (narrowPeak) [Experiment: ENCSR245HFY] [Life stage: Adult] [Histone ChIP-seq peaks]
H3K27ac • Uterus NGENCYCTJMJ7OL • ENCODE PMID: 22955616 | 41168159 | 31713622 Histone ChIP-seq Uterus Female Reproductive • Adult Histone Show metadata Download track Track metadata identifier NGENCYCTJMJ7OL data_source ENCODE Download track Download number_of_intervals 67,398 bp_covered 112,282,063 output_type pseudoreplicated peaks genome_build hg38 cell_type Uterus biosample_type Tissue biosample_term_id UBERON:0000995 tissue_category Female Reproductive encode_experiment_id ENCSR249INE biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody H3K27ac assay Histone ChIP-seq file_format bed narrowPeak file_size 1,942,595 downloaded_date 06/12/2022 release_date 09/17/2020 date_added_to_filer 08/22/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF264MGR.bed.gz processed_file_md5 bee3ddf3f016fbd6befabe12ad82bf42 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF264MGR.bed.gz -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF264MGR.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF264MGR/@@download/ENCFF264MGR.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF264MGR.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 43e68a9fc9ee17dbd15a235c41a2b0e1 data_category Histone ChIP-seq peaks Genomic feature type Histone ChIP-seq H3K27ac pseudoreplicated peaks track_description version=2024;Biosample_summary=Homo sapiens uterus tissue female adult (53 years);Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_2_2,ccre_inputv2,ENCYCLOPEDIAv2,ENTEx;Life_stage_age=adult 53 years;Reference=PMID:32728046;External_resources=SCREEN-GRCh38:uterus_female_adult_53_years,GEO:GSE101065;Project=ENCODE;Award=U54HG006991;Experiment_date_released=2016-11-03;Submitted_track_name=pooled-pr1_vs_pooled-pr2.overlap.bfilt.narrowPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=uterus;ENCODE_cell_slims=NR;ENCODE_system_slims=reproductive system;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ENCODE.html;original_biosample_term_id=UBERON:0000995;is_hg38_lifted=no;narrowPeak_filter=qValueLog10 system_category Reproductive life_stage Adult track_name ENCODE Uterus (repl. 1, 2) Histone ChIP-seq H3K27ac pseudoreplicated peaks (narrowPeak) [Experiment: ENCSR249INE] [Life stage: Adult] [Histone ChIP-seq peaks]
H3K27ac • Thyroid gland NGENCYD65TF57T • ENCODE PMID: 22955616 | 41168159 | 31713622 Histone ChIP-seq Thyroid gland Endocrine • Adult Histone Show metadata Download track Track metadata identifier NGENCYD65TF57T data_source ENCODE Download track Download number_of_intervals 76,634 bp_covered 120,114,788 output_type pseudoreplicated peaks genome_build hg38 cell_type Thyroid gland biosample_type Tissue biosample_term_id UBERON:0002046 tissue_category Endocrine encode_experiment_id ENCSR500YBS biological_replicate 1 technical_replicate 1_1, 1_2 antibody H3K27ac assay Histone ChIP-seq file_format bed narrowPeak file_size 2,078,164 downloaded_date 06/12/2022 release_date 09/22/2020 date_added_to_filer 08/22/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF807QDW.bed.gz processed_file_md5 891e28a8539591b4c53d7585a469a463 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF807QDW.bed.gz -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF807QDW.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF807QDW/@@download/ENCFF807QDW.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF807QDW.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 cc9a458dd14296f517e84d14abe361dc data_category Histone ChIP-seq peaks Genomic feature type Histone ChIP-seq H3K27ac pseudoreplicated peaks track_description version=2024;Biosample_summary=Homo sapiens thyroid gland tissue female adult (51 years);Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_2_2,ENTEx;Life_stage_age=adult 51 years;Reference=NR;External_resources=GEO:GSE142995;Project=ENCODE;Award=UM1HG009390;Experiment_date_released=2019-02-12,2017-08-28;Submitted_track_name=rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=thyroid gland;ENCODE_cell_slims=NR;ENCODE_system_slims=endocrine system;ENCODE_biosample_term_synonyms=thyroid;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ENCODE.html;original_biosample_term_id=UBERON:0002046;is_hg38_lifted=no;narrowPeak_filter=qValueLog10 system_category Endocrine life_stage Adult track_name ENCODE Thyroid gland (repl. 1) Histone ChIP-seq H3K27ac pseudoreplicated peaks (narrowPeak) [Experiment: ENCSR500YBS] [Life stage: Adult] [Histone ChIP-seq peaks]
H3K27ac • Gastrocnemius medialis NGENCYEHOVQOHE • ENCODE PMID: 22955616 | 41168159 | 31713622 Histone ChIP-seq Gastrocnemius medialis Skeletal Muscle • Adult Histone Show metadata Download track Track metadata identifier NGENCYEHOVQOHE data_source ENCODE Download track Download number_of_intervals 58,589 bp_covered 103,483,540 output_type pseudoreplicated peaks genome_build hg38 cell_type Gastrocnemius medialis biosample_type Tissue biosample_term_id UBERON:0011907 tissue_category Skeletal Muscle encode_experiment_id ENCSR736ALU biological_replicate 1 technical_replicate 1_1 antibody H3K27ac assay Histone ChIP-seq file_format bed narrowPeak file_size 1,615,015 downloaded_date 06/12/2022 release_date 09/17/2020 date_added_to_filer 08/22/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF434EHO.bed.gz processed_file_md5 1af63494bad7b82f8862fefe0b190dde wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF434EHO.bed.gz -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF434EHO.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF434EHO/@@download/ENCFF434EHO.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF434EHO.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 311ddda5e294a18ba4ed82dd6c540e55 data_category Histone ChIP-seq peaks Genomic feature type Histone ChIP-seq H3K27ac pseudoreplicated peaks track_description version=2024;Biosample_summary=Homo sapiens gastrocnemius medialis tissue female adult (53 years);Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=ccre_inputv2,ENTEx,ccre_inputv1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=adult 53 years;Reference=PMID:32728046;External_resources=SCREEN-GRCh38:gastrocnemius_medialis_female_adult_53_years,GEO:GSE96345;Project=ENCODE;Award=U54HG006991;Experiment_date_released=2016-11-04,2016-11-03;Submitted_track_name=rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=gastrocnemius medialis;ENCODE_cell_slims=NR;ENCODE_system_slims=musculature;ENCODE_biosample_term_synonyms=medial head of gastrocnemius muscle,medial head of gastrocnemius,caput mediale (musculus gastrocnemius),caput mediale musculus gastrocnemii;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ENCODE.html;original_biosample_term_id=UBERON:0011907;is_hg38_lifted=no;narrowPeak_filter=qValueLog10 system_category Muscular life_stage Adult track_name ENCODE Gastrocnemius medialis (repl. 1) Histone ChIP-seq H3K27ac pseudoreplicated peaks (narrowPeak) [Experiment: ENCSR736ALU] [Life stage: Adult] [Histone ChIP-seq peaks]
H3K27ac • A549 NGENCYG4O7SSOG • ENCODE PMID: 22955616 | 41168159 | 31713622 Histone ChIP-seq A549 Lung • Adult Histone Show metadata Download track Track metadata identifier NGENCYG4O7SSOG data_source ENCODE Download track Download number_of_intervals 81,391 bp_covered 129,695,176 output_type pseudoreplicated peaks genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR864KVZ biological_replicate 2 technical_replicate 2_1 antibody H3K27ac assay Histone ChIP-seq file_format bed narrowPeak file_size 2,381,239 downloaded_date 07/10/2025 release_date 10/01/2020 date_added_to_filer 07/30/2025 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/2/ENCFF023EVQ.bed.gz processed_file_md5 336935b8bc5612b7b3ff2b5cff24b9f9 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/2/ENCFF023EVQ.bed.gz -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/2/ENCFF023EVQ.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF023EVQ/@@download/ENCFF023EVQ.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF023EVQ.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 91529842d29c9d71855fb611b1092429 data_category Histone ChIP-seq peaks Genomic feature type Histone ChIP-seq H3K27ac pseudoreplicated peaks track_description version=2024;Biosample_summary=Homo sapiens A549 treated with 100 nM dexamethasone (agonist) for 20 minutes;Lab=Tim Reddy, Duke;ENCODE_internal_tags=NR;Life_stage_age=adult 58 years;Reference=NR;External_resources=GEO:GSE175275;Project=GGR;Award=U01HG007900;Experiment_date_released=2017-10-19;Submitted_track_name=rep2-pr1_vs_rep2-pr2.overlap.bfilt.narrowPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=A549;ENCODE_cell_slims=cancer cell;ENCODE_system_slims=respiratory system;ENCODE_biosample_term_synonyms=A549 cell,A-549;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no;narrowPeak_filter=qValueLog10 system_category Respiratory life_stage Adult track_name ENCODE A549 (repl. 2) Histone ChIP-seq H3K27ac pseudoreplicated peaks (narrowPeak) [Experiment: ENCSR864KVZ] [Life stage: Adult] [Histone ChIP-seq peaks]
H3K27ac • HCT116 NGENCYGMIO6TLK • ENCODE PMID: 22955616 | 41168159 | 31713622 Histone ChIP-seq HCT116 Digestive • Adult Histone Show metadata Download track Track metadata identifier NGENCYGMIO6TLK data_source ENCODE Download track Download number_of_intervals 35,522 bp_covered 54,868,961 output_type replicated peaks genome_build hg38 cell_type HCT116 biosample_type Cell line biosample_term_id EFO:0002824 tissue_category Digestive encode_experiment_id ENCSR661KMA biological_replicate 1, 2 technical_replicate 1_1, 2_2 antibody H3K27ac assay Histone ChIP-seq file_format bed narrowPeak file_size 1,021,186 downloaded_date 06/12/2022 release_date 10/20/2020 date_added_to_filer 08/22/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF009TOA.bed.gz processed_file_md5 265043ded778cf81a8e323e5953e7c8f wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF009TOA.bed.gz -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF009TOA.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF009TOA/@@download/ENCFF009TOA.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF009TOA.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 4f1aa12980242dfdbab28200f7b401b8 data_category Histone ChIP-seq peaks Genomic feature type Histone ChIP-seq H3K27ac replicated peaks track_description version=2024;Biosample_summary=Homo sapiens HCT116;Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=ccre_inputv2,ENCYCLOPEDIAv2,ccre_inputv1,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=adult 48 years;Reference=PMID:32728046;External_resources=SCREEN-GRCh38:HCT116,GEO:GSE96299;Project=ENCODE;Award=U54HG006991;Experiment_date_released=2016-11-18,2015-08-03;Submitted_track_name=rep1_vs_rep2.overlap.bfilt.narrowPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=HCT116;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_system_slims=digestive system;ENCODE_biosample_term_synonyms=HCT-116 cell,HCT116 cell;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002824;is_hg38_lifted=no;narrowPeak_filter=qValueLog10 system_category Digestive life_stage Adult track_name ENCODE HCT116 (repl. 1, 2) Histone ChIP-seq H3K27ac replicated peaks (narrowPeak) [Experiment: ENCSR661KMA] [Life stage: Adult] [Histone ChIP-seq peaks]
H3K27ac • Epithelium NGENCYI23SX3WZ • ENCODE PMID: 22955616 | 41168159 | 31713622 Histone ChIP-seq Epithelium Breast • Adult Histone Show metadata Download track Track metadata identifier NGENCYI23SX3WZ data_source ENCODE Download track Download number_of_intervals 72,171 bp_covered 110,483,844 output_type pseudoreplicated peaks genome_build hg38 cell_type Epithelium biosample_type Tissue biosample_term_id NCIT:C12710 tissue_category Breast encode_experiment_id ENCSR081OTO biological_replicate 1 technical_replicate 1_1, 1_2 antibody H3K27ac assay Histone ChIP-seq file_format bed narrowPeak file_size 1,803,621 downloaded_date 06/12/2022 release_date 09/22/2020 date_added_to_filer 08/22/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF018KNF.bed.gz processed_file_md5 c966120f4295f32f2bca16cd0653ed6b wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF018KNF.bed.gz -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF018KNF.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF018KNF/@@download/ENCFF018KNF.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF018KNF.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 244c25fd139740f578209d8e10abc258 data_category Histone ChIP-seq peaks Genomic feature type Histone ChIP-seq H3K27ac pseudoreplicated peaks track_description version=2024;Biosample_summary=Homo sapiens breast epithelium tissue female adult (51 years);Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_2_2,ENTEx;Life_stage_age=adult 51 years;Reference=NR;External_resources=GEO:GSE139697;Project=ENCODE;Award=UM1HG009390;Experiment_date_released=2019-09-11,2019-09-06;Submitted_track_name=rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=breast epithelium;ENCODE_cell_slims=NR;ENCODE_system_slims=NR;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ENCODE.html;original_biosample_term_id=UBERON:0008367;is_hg38_lifted=no;narrowPeak_filter=qValueLog10 system_category Reproductive life_stage Adult track_name ENCODE Epithelium (repl. 1) Histone ChIP-seq H3K27ac pseudoreplicated peaks (narrowPeak) [Experiment: ENCSR081OTO] [Life stage: Adult] [Histone ChIP-seq peaks]
H3K27ac • Ectodermal cell NGENCYJ2JXBDNW • ENCODE PMID: 22955616 | 41168159 | 31713622 Histone ChIP-seq Ectodermal cell Embryo • Embryonic Histone Show metadata Download track Track metadata identifier NGENCYJ2JXBDNW data_source ENCODE Download track Download number_of_intervals 32,335 bp_covered 20,290,040 output_type replicated peaks genome_build hg38 cell_type Ectodermal cell biosample_type In vitro differentiated cells biosample_term_id CL:0000221 tissue_category Embryo encode_experiment_id ENCSR747HAM biological_replicate 1, 2 technical_replicate 1_2, 2_2 antibody H3K27ac assay Histone ChIP-seq file_format bed narrowPeak file_size 756,691 downloaded_date 06/12/2022 release_date 02/10/2021 date_added_to_filer 08/22/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF694PAG.bed.gz processed_file_md5 3e617175d6f2b99ed44721e13f8e8f73 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF694PAG.bed.gz -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF694PAG.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF694PAG/@@download/ENCFF694PAG.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF694PAG.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 21ad968b34729a92a1f70b51dcf1c532 data_category Histone ChIP-seq peaks Genomic feature type Histone ChIP-seq H3K27ac replicated peaks track_description version=2024;Biosample_summary=Homo sapiens ectodermal cell originated from HUES64;Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=ENCYCLOPEDIAv1,RegulomeDB_2_2,ccre_inputv2,ENCYCLOPEDIAv2;Life_stage_age=NR;Reference=PMID:32728046;External_resources=GEO:GSM1112829,SCREEN-GRCh38:ectodermal_cell_originated_from_embryonic_stem_cell,GEO:GSM1112824;Project=Roadmap;Award=U01ES017155;Experiment_date_released=2013-07-31;Submitted_track_name=NR;ENCODE_preferred_default=false;ENCODE_biosample_term_name=ectodermal cell;ENCODE_cell_slims=embryonic cell;ENCODE_system_slims=NR;ENCODE_biosample_term_synonyms=ectoderm cell;Analysis_title=ENCODE4 v1.7.0 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ENCODE.html;original_biosample_term_id=CL:0000221;is_hg38_lifted=no;narrowPeak_filter=qValueLog10 system_category Embryo life_stage Embryonic track_name ENCODE Ectodermal cell (repl. 1, 2) Histone ChIP-seq H3K27ac replicated peaks (narrowPeak) [Experiment: ENCSR747HAM] [Life stage: Embryonic] [Histone ChIP-seq peaks]
H3K27ac • Naive thymus-derived CD4+ alpha-beta T cell NGENCYJMPS4SQC • ENCODE PMID: 22955616 | 41168159 | 31713622 Mint-ChIP-seq Naive thymus-derived CD4+ alpha-beta T cell Blood • Adult Histone Show metadata Download track Track metadata identifier NGENCYJMPS4SQC data_source ENCODE Download track Download number_of_intervals 345,323 bp_covered 117,847,538 output_type pseudoreplicated peaks genome_build hg38 cell_type Naive thymus-derived CD4+ alpha-beta T cell biosample_type Primary cell biosample_term_id CL:0000895 tissue_category Blood encode_experiment_id ENCSR082DLA biological_replicate 1 technical_replicate 1_1, 1_2 antibody H3K27ac assay Mint-ChIP-seq file_format bed narrowPeak file_size 8,351,855 downloaded_date 06/12/2022 release_date 03/30/2022 date_added_to_filer 08/22/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/Mint-ChIP-seq/narrowpeak/hg38/ENCFF044RVY.bed.gz processed_file_md5 549c0f18c0b5404fd624716ffb851a47 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Mint-ChIP-seq/narrowpeak/hg38/ENCFF044RVY.bed.gz -P GADB/Annotationtracks/ENCODE/data/Mint-ChIP-seq/narrowpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Mint-ChIP-seq/narrowpeak/hg38/ENCFF044RVY.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/Mint-ChIP-seq/narrowpeak/hg38/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF044RVY/@@download/ENCFF044RVY.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF044RVY.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 3915fb3f7285722c98f66c1cdd8f4a1f data_category Histone ChIP-seq peaks Genomic feature type Mint-ChIP-seq H3K27ac pseudoreplicated peaks track_description version=2024;Biosample_summary=Homo sapiens naive thymus-derived CD4-positive, alpha-beta T cell male adult (50 years);Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=NR;Life_stage_age=adult 50 years;Reference=NR;External_resources=GEO:GSE208517;Project=ENCODE;Award=UM1HG009390;Experiment_date_released=2022-04-27,2022-04-26;Submitted_track_name=rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=naive thymus-derived CD4-positive, alpha-beta T cell;ENCODE_cell_slims=T cell,leukocyte,CD4+ T cell,hematopoietic cell;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=naive thymus-derived CD4-positive, alpha-beta T lymphocyte,Th0,naive thymus-derived CD4-positive, alpha-beta T-cell,naive thymus-derived CD4-positive, alpha-beta T-lymphocyte,T.4Nve.Sp;Analysis_title=ENCODE4 v1.8.0 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ENCODE.html;original_biosample_term_id=CL:0000895;is_hg38_lifted=no;narrowPeak_filter=qValueLog10 system_category Cardiovascular life_stage Adult track_name ENCODE Naive thymus-derived CD4+ alpha-beta T cell (repl. 1) Mint-ChIP-seq H3K27ac-histone-mark pseudoreplicated peaks (narrowPeak) [Experiment: ENCSR082DLA] [Life stage: Adult] [Histone ChIP-seq peaks]
H3K27ac • BLaER1 NGENCYJNGSCAMN • ENCODE PMID: 22955616 | 41168159 | 31713622 Histone ChIP-seq BLaER1 Blood • Unknown Histone Show metadata Download track Track metadata identifier NGENCYJNGSCAMN data_source ENCODE Download track Download number_of_intervals 41,371 bp_covered 69,455,129 output_type peaks genome_build hg38 cell_type BLaER1 biosample_type Cell line biosample_term_id EFO:0030018 tissue_category Blood encode_experiment_id ENCSR217SDT biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody H3K27ac assay Histone ChIP-seq file_format bed bed3+1 score file_size 324,911 downloaded_date 06/12/2022 release_date 01/28/2022 date_added_to_filer 11/08/2022 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/bed4/hg38/ENCFF946FDA.bed.gz processed_file_md5 d825d94d8b18a6300c6b80d6bb5a0aa0 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/bed4/hg38/ENCFF946FDA.bed.gz -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/bed4/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/bed4/hg38/ENCFF946FDA.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/bed4/hg38/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF946FDA/@@download/ENCFF946FDA.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF946FDA.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 5c64ef88fc7409dad4d203a9c6d3a425 data_category Histone ChIP-seq peaks Genomic feature type Histone ChIP-seq H3K27ac peaks track_description version=2024;Biosample_summary=Homo sapiens BLaER1 48 hours after the sample was treated with 100 nM 17_-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1;Lab=Roderic Guigo, CRG;ENCODE_internal_tags=RegulomeDB_2_2;Life_stage_age=NR;Reference=NR;External_resources=GEO:GSE256919;Project=community;Award=ERC-2011-AdG-294653-RNA-MAPS;Experiment_date_released=2022-05-10;Submitted_track_name=H048H3K27ac_zerone_merged.bed.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=BLaER1;ENCODE_cell_slims=NR;ENCODE_system_slims=immune system,skeletal system;ENCODE_biosample_term_synonyms=B cell Leukemia C/EBPalphaER clone 1;Analysis_title=Lab custom GRCh38;GM=NR;schema=BED3+1;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0030018;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name ENCODE BLaER1 (repl. 1, 2) Histone ChIP-seq H3K27ac peaks (bed3+1 score) [Experiment: ENCSR217SDT] [Histone ChIP-seq peaks]
H3K27ac • Naive thymus-derived CD4+ alpha-beta T cell NGENCYL6JYRBOP • ENCODE PMID: 22955616 | 41168159 | 31713622 Mint-ChIP-seq Naive thymus-derived CD4+ alpha-beta T cell Blood • Adult Histone Show metadata Download track Track metadata identifier NGENCYL6JYRBOP data_source ENCODE Download track Download number_of_intervals 160,034 bp_covered 176,767,690 output_type pseudoreplicated peaks genome_build hg38 cell_type Naive thymus-derived CD4+ alpha-beta T cell biosample_type Primary cell biosample_term_id CL:0000895 tissue_category Blood encode_experiment_id ENCSR787ZCK biological_replicate 1 technical_replicate 1_1, 1_2 antibody H3K27ac assay Mint-ChIP-seq file_format bed narrowPeak file_size 4,216,817 downloaded_date 06/12/2022 release_date 03/31/2022 date_added_to_filer 08/22/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/Mint-ChIP-seq/narrowpeak/hg38/ENCFF399HCX.bed.gz processed_file_md5 1e2b62f788568b4ea4896dacb8f737f5 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Mint-ChIP-seq/narrowpeak/hg38/ENCFF399HCX.bed.gz -P GADB/Annotationtracks/ENCODE/data/Mint-ChIP-seq/narrowpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Mint-ChIP-seq/narrowpeak/hg38/ENCFF399HCX.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/Mint-ChIP-seq/narrowpeak/hg38/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF399HCX/@@download/ENCFF399HCX.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF399HCX.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 25d507a70c47940b78a10c83c782864d data_category Histone ChIP-seq peaks Genomic feature type Mint-ChIP-seq H3K27ac pseudoreplicated peaks track_description version=2024;Biosample_summary=Homo sapiens naive thymus-derived CD4-positive, alpha-beta T cell male adult (48 years);Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=NR;Life_stage_age=adult 48 years;Reference=NR;External_resources=GEO:GSE209139;Project=ENCODE;Award=UM1HG009390;Experiment_date_released=2022-04-27,2022-04-26;Submitted_track_name=rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=naive thymus-derived CD4-positive, alpha-beta T cell;ENCODE_cell_slims=T cell,leukocyte,CD4+ T cell,hematopoietic cell;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=naive thymus-derived CD4-positive, alpha-beta T lymphocyte,Th0,naive thymus-derived CD4-positive, alpha-beta T-cell,naive thymus-derived CD4-positive, alpha-beta T-lymphocyte,T.4Nve.Sp;Analysis_title=ENCODE4 v1.8.0 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ENCODE.html;original_biosample_term_id=CL:0000895;is_hg38_lifted=no;narrowPeak_filter=qValueLog10 system_category Cardiovascular life_stage Adult track_name ENCODE Naive thymus-derived CD4+ alpha-beta T cell (repl. 1) Mint-ChIP-seq H3K27ac-histone-mark pseudoreplicated peaks (narrowPeak) [Experiment: ENCSR787ZCK] [Life stage: Adult] [Histone ChIP-seq peaks]
H3K27ac • Naive B cell NGENCYM7XSLHRI • ENCODE PMID: 22955616 | 41168159 | 31713622 Mint-ChIP-seq Naive B cell Blood • Adult Histone Show metadata Download track Track metadata identifier NGENCYM7XSLHRI data_source ENCODE Download track Download number_of_intervals 218,251 bp_covered 104,185,027 output_type pseudoreplicated peaks genome_build hg38 cell_type Naive B cell biosample_type Primary cell biosample_term_id CL:0000788 tissue_category Blood encode_experiment_id ENCSR684HLM biological_replicate 1 technical_replicate 1_1, 1_2 antibody H3K27ac assay Mint-ChIP-seq file_format bed narrowPeak file_size 5,288,366 downloaded_date 06/12/2022 release_date 03/13/2022 date_added_to_filer 08/22/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/Mint-ChIP-seq/narrowpeak/hg38/ENCFF767DJU.bed.gz processed_file_md5 27afe52f202654ee63819f6153b5e156 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Mint-ChIP-seq/narrowpeak/hg38/ENCFF767DJU.bed.gz -P GADB/Annotationtracks/ENCODE/data/Mint-ChIP-seq/narrowpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Mint-ChIP-seq/narrowpeak/hg38/ENCFF767DJU.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/Mint-ChIP-seq/narrowpeak/hg38/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF767DJU/@@download/ENCFF767DJU.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF767DJU.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 01da4729db29f5412308406aa9e0162d data_category Histone ChIP-seq peaks Genomic feature type Mint-ChIP-seq H3K27ac pseudoreplicated peaks track_description version=2024;Biosample_summary=Homo sapiens stimulated activated naive B cell female adult (39 years) treated with 1 _g/mL anti-CD40 for 72 hours, 100 ng/mL Interleukin-4 for 72 hours, 10 _g/mL anti-IgM for 72 hours;Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=NR;Life_stage_age=adult 39 years;Reference=NR;External_resources=GEO:GSE209493;Project=ENCODE;Award=UM1HG009390;Experiment_date_released=2022-03-28;Submitted_track_name=rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=stimulated activated naive B cell;ENCODE_cell_slims=leukocyte,B cell,hematopoietic cell;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.8.0 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ENCODE.html;original_biosample_term_id=NTR:0000661;is_hg38_lifted=no;narrowPeak_filter=qValueLog10 system_category Cardiovascular life_stage Adult track_name ENCODE Naive B cell (repl. 1) Mint-ChIP-seq H3K27ac-histone-mark pseudoreplicated peaks (narrowPeak) [Experiment: ENCSR684HLM] [Life stage: Adult] [Histone ChIP-seq peaks]