H3K27ac • PU.1+ Microglia NGNOTNB6JHQR44 • Nott 201931727856 Enhancer PU.1+ Microglia Enhancer Show metadata Download track Track metadata identifier NGNOTNB6JHQR44 data_source Nott_2019 Download track Download number_of_intervals 44,092 bp_covered 59,339,374 output_type enhancer peaks genome_build hg38 cell_type PU.1+ Microglia biosample_type Tissue biosample_term_id CL:0000129 tissue_category Brain encode_experiment_id Not applicable biological_replicate Not reported technical_replicate Not applicable antibody H3K27ac assay Enhancer file_format bed bed3-lifted file_size 734,814 downloaded_date 10/02/2020 release_date 02/04/2020 date_added_to_filer 12/03/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/Nott_2019/Enhancer/bed3-lifted/hg38/formatted_output_Microglia_enhancers_lifted.bed.gz processed_file_md5 bcca034e2608b698ab6e3ecb4f9da3d3 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/Nott_2019/Enhancer/bed3-lifted/hg38/formatted_output_Microglia_enhancers_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nott_2019/Enhancer/bed3-lifted/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/Nott_2019/Enhancer/bed3-lifted/hg38/formatted_output_Microglia_enhancers_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nott_2019/Enhancer/bed3-lifted/hg38/ link_out_url https://homer.ucsd.edu/iholtman/Nuclei_project/interaction/MAPS/ raw_file_url Not applicable raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/Nott_2019/enhancers/PU1_enhancers.sorted.bigBed -P FILER2/Annotationtracks/Downloads/Nott_2019/enhancers/PU1_enhancers.sorted.bigBed raw_file_md5 dc5e9fce9cb59fbc99df84908a6e7092 data_category Enhancer Genomic feature type H3K27ac enhancer peaks track_description version=2019;Original_cell_type=microglia;doi=https://doi.org/10.1126/science.aay0793;pubmed_id=31727856;notes=Active enhancers were identified by H3K27ac peaks that were outside of H3K4me3 peaks;ages=14yo, 4yo, 18yo;sexes=M;ethnicities=His, Caucasian;brain_regions=Parietal Cortex, Temporal Cortex;pathologies_dx=Residual ateriovenous malformation, Negative pathology, Focal cortical dysplasia type Ic;dataSource_pubmed_id=31727856;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/Nott_2019.html;original_biosample_term_id=Not available;is_hg38_lifted=yes;schema=BED3 system_category Nervous life_stage Adult, Child track_name Nott_2019 PU.1+ Microglia Enhancer H3K27ac-histone-mark enhancer peaks (bed3-lifted) [Life stage: Adult, Child] [Enhancer]
H3K27ac • Oligodendrocyte NGNOTOIYQQ2H4O • Nott 201931727856 Histone ChIP-seq Oligodendrocyte Histone Show metadata Download track Track metadata identifier NGNOTOIYQQ2H4O data_source Nott_2019 Download track Download number_of_intervals 73,122 bp_covered 106,184,364 output_type peaks genome_build hg38 cell_type Oligodendrocyte biosample_type Tissue biosample_term_id CL:0000128 tissue_category Brain encode_experiment_id Not applicable biological_replicate Not reported technical_replicate Not applicable antibody H3K27ac assay Histone ChIP-seq file_format bed bed3-lifted file_size 1,220,856 downloaded_date 10/02/2020 release_date 02/04/2020 date_added_to_filer 12/03/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/Nott_2019/Histone_ChIP-seq/bed3-lifted/hg38/formatted_output_Olig2_optimal_peak_IDR_ENCODE.H3K27_lifted.bed.gz processed_file_md5 e02c0ff47978f0df61e6b214f0d8c075 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/Nott_2019/Histone_ChIP-seq/bed3-lifted/hg38/formatted_output_Olig2_optimal_peak_IDR_ENCODE.H3K27_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nott_2019/Histone_ChIP-seq/bed3-lifted/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/Nott_2019/Histone_ChIP-seq/bed3-lifted/hg38/formatted_output_Olig2_optimal_peak_IDR_ENCODE.H3K27_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nott_2019/Histone_ChIP-seq/bed3-lifted/hg38/ link_out_url https://homer.ucsd.edu/iholtman/Nuclei_project/interaction/MAPS/ raw_file_url Not applicable raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/Nott_2019/H3K27/Olig2_optimal_peak_IDR_ENCODE.H3K27.sorted.bigBed.gz -P FILER2/Annotationtracks/Downloads/Nott_2019/H3K27/Olig2_optimal_peak_IDR_ENCODE.H3K27.sorted.bigBed.gz raw_file_md5 47dcef5d7d90621cea37887ec9b62bb8 data_category Histone ChIP-seq peaks Genomic feature type Histone ChIP-seq H3K27ac peaks track_description version=2019;Original_cell_type=Olig2_optimal_peak_IDR_ENCODE.H3K27;doi=https://doi.org/10.1126/science.aay0793;pubmed_id=31727856;ages=14yo, 18yo, 4yo;sexes=M;ethnicities=Caucasian, His;brain_regions=Parietal Cortex, Temporal Cortex;pathologies_dx=Focal cortical dysplasia type Ic, Negative pathology, Residual ateriovenous malformation;dataSource_pubmed_id=31727856;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/Nott_2019.html;original_biosample_term_id=Not available;is_hg38_lifted=yes;schema=BED3 system_category Nervous life_stage Adult, Child track_name Nott_2019 Oligodendrocyte Histone ChIP-seq H3K27ac peaks (bed3-lifted) [Life stage: Adult, Child] [Histone ChIP-seq peaks]
H3K27ac • Neuron NGNOTRESVMYECC • Nott 201931727856 Histone ChIP-seq Neuron Histone Show metadata Download track Track metadata identifier NGNOTRESVMYECC data_source Nott_2019 Download track Download number_of_intervals 148,066 bp_covered 157,234,772 output_type peaks genome_build hg38 cell_type Neuron biosample_type Tissue biosample_term_id CL:0000540 tissue_category Brain encode_experiment_id Not applicable biological_replicate Not reported technical_replicate Not applicable antibody H3K27ac assay Histone ChIP-seq file_format bed bed3-lifted file_size 2,416,796 downloaded_date 10/02/2020 release_date 02/04/2020 date_added_to_filer 12/03/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/Nott_2019/Histone_ChIP-seq/bed3-lifted/hg38/formatted_output_NeuN_optimal_peak_IDR_ENCODE.H3K27_lifted.bed.gz processed_file_md5 2b2caaea48f1970d0509c0615c7ad141 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/Nott_2019/Histone_ChIP-seq/bed3-lifted/hg38/formatted_output_NeuN_optimal_peak_IDR_ENCODE.H3K27_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nott_2019/Histone_ChIP-seq/bed3-lifted/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/Nott_2019/Histone_ChIP-seq/bed3-lifted/hg38/formatted_output_NeuN_optimal_peak_IDR_ENCODE.H3K27_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nott_2019/Histone_ChIP-seq/bed3-lifted/hg38/ link_out_url https://homer.ucsd.edu/iholtman/Nuclei_project/interaction/MAPS/ raw_file_url Not applicable raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/Nott_2019/H3K27/NeuN_optimal_peak_IDR_ENCODE.H3K27.sorted.bigBed.gz -P FILER2/Annotationtracks/Downloads/Nott_2019/H3K27/NeuN_optimal_peak_IDR_ENCODE.H3K27.sorted.bigBed.gz raw_file_md5 67c6c2e06a3fe6497af988d5f0a89200 data_category Histone ChIP-seq peaks Genomic feature type Histone ChIP-seq H3K27ac peaks track_description version=2019;Original_cell_type=NeuN_optimal_peak_IDR_ENCODE.H3K27;doi=https://doi.org/10.1126/science.aay0793;pubmed_id=31727856;ages=14yo, 18yo, 4yo;sexes=M;ethnicities=Caucasian, His;brain_regions=Parietal Cortex, Temporal Cortex;pathologies_dx=Focal cortical dysplasia type Ic, Negative pathology, Residual ateriovenous malformation;dataSource_pubmed_id=31727856;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/Nott_2019.html;original_biosample_term_id=Not available;is_hg38_lifted=yes;schema=BED3 system_category Nervous life_stage Adult, Child track_name Nott_2019 Neuron Histone ChIP-seq H3K27ac peaks (bed3-lifted) [Life stage: Adult, Child] [Histone ChIP-seq peaks]
H3K27ac • Oligodendrocyte NGNOTU27DPCXEX • Nott 201931727856 Super-enhancer Oligodendrocyte Enhancer Show metadata Download track Track metadata identifier NGNOTU27DPCXEX data_source Nott_2019 Download track Download number_of_intervals 1,152 bp_covered 76,371,866 output_type super-enhancer peaks genome_build hg38 cell_type Oligodendrocyte biosample_type Tissue biosample_term_id CL:0000128 tissue_category Brain encode_experiment_id Not applicable biological_replicate Not reported technical_replicate Not applicable antibody H3K27ac assay Super-enhancer file_format bed bed6-lifted file_size 29,170 downloaded_date 10/02/2020 release_date 02/04/2020 date_added_to_filer 12/03/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/Nott_2019/Super-enhancer/bed6-lifted/hg38/formatted_output_OLIG2_superEnhancer_L1_lifted.bed.gz processed_file_md5 3a9ffa8958fb78570266e2cb951eb6c3 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/Nott_2019/Super-enhancer/bed6-lifted/hg38/formatted_output_OLIG2_superEnhancer_L1_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nott_2019/Super-enhancer/bed6-lifted/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/Nott_2019/Super-enhancer/bed6-lifted/hg38/formatted_output_OLIG2_superEnhancer_L1_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nott_2019/Super-enhancer/bed6-lifted/hg38/ link_out_url https://homer.ucsd.edu/iholtman/Nuclei_project/interaction/MAPS/ raw_file_url Not applicable raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/Nott_2019/Super_enhancers/OLIG2_superEnhancer_L1.gz -P FILER2/Annotationtracks/Downloads/Nott_2019/Super_enhancers/OLIG2_superEnhancer_L1.gz raw_file_md5 6d6ef51d95473ed9c6980986c55ecf02 data_category Enhancer Genomic feature type H3K27ac super-enhancer peaks track_description version=2019;Original_cell_type=oligodendrocytes;doi=https://doi.org/10.1126/science.aay0793;pubmed_id=31727856;notes=Active enhancers were identified by H3K27ac peaks that were outside of H3K4me3 peaks;ages=14yo, 4yo, 18yo;sexes=M;ethnicities=His, Caucasian;brain_regions=Parietal Cortex, Temporal Cortex;pathologies_dx=Residual ateriovenous malformation, Negative pathology, Focal cortical dysplasia type Ic;dataSource_pubmed_id=31727856;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/Nott_2019.html;original_biosample_term_id=Not available;is_hg38_lifted=yes;schema=BED6 system_category Nervous life_stage Adult, Child track_name Nott_2019 Oligodendrocyte Super-enhancer H3K27ac-histone-mark super-enhancer peaks (bed6-lifted) [Life stage: Adult, Child] [Enhancer]
H3K27ac • Neuron NGNOTV6NH54PXG • Nott 201931727856 Super-enhancer Neuron Enhancer Show metadata Download track Track metadata identifier NGNOTV6NH54PXG data_source Nott_2019 Download track Download number_of_intervals 1,170 bp_covered 98,328,897 output_type super-enhancer peaks genome_build hg38 cell_type Neuron biosample_type Tissue biosample_term_id CL:0000540 tissue_category Brain encode_experiment_id Not applicable biological_replicate Not reported technical_replicate Not applicable antibody H3K27ac assay Super-enhancer file_format bed bed6-lifted file_size 29,680 downloaded_date 10/02/2020 release_date 02/04/2020 date_added_to_filer 12/03/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/Nott_2019/Super-enhancer/bed6-lifted/hg38/formatted_output_NEUN_superEnhancer_L1_lifted.bed.gz processed_file_md5 7e0e8eb72bfe649022b85c472cf0ff4f wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/Nott_2019/Super-enhancer/bed6-lifted/hg38/formatted_output_NEUN_superEnhancer_L1_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nott_2019/Super-enhancer/bed6-lifted/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/Nott_2019/Super-enhancer/bed6-lifted/hg38/formatted_output_NEUN_superEnhancer_L1_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nott_2019/Super-enhancer/bed6-lifted/hg38/ link_out_url https://homer.ucsd.edu/iholtman/Nuclei_project/interaction/MAPS/ raw_file_url Not applicable raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/Nott_2019/Super_enhancers/NEUN_superEnhancer_L1.gz -P FILER2/Annotationtracks/Downloads/Nott_2019/Super_enhancers/NEUN_superEnhancer_L1.gz raw_file_md5 c9e8e569c8137b41a055488b927275ea data_category Enhancer Genomic feature type H3K27ac super-enhancer peaks track_description version=2019;Original_cell_type=neurons;doi=https://doi.org/10.1126/science.aay0793;pubmed_id=31727856;notes=Active enhancers were identified by H3K27ac peaks that were outside of H3K4me3 peaks;ages=14yo, 4yo, 18yo;sexes=M;ethnicities=His, Caucasian;brain_regions=Parietal Cortex, Temporal Cortex;pathologies_dx=Residual ateriovenous malformation, Negative pathology, Focal cortical dysplasia type Ic;dataSource_pubmed_id=31727856;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/Nott_2019.html;original_biosample_term_id=Not available;is_hg38_lifted=yes;schema=BED6 system_category Nervous life_stage Adult, Child track_name Nott_2019 Neuron Super-enhancer H3K27ac-histone-mark super-enhancer peaks (bed6-lifted) [Life stage: Adult, Child] [Enhancer]
H3K27ac • Oligodendrocyte NGNOTWSU2X2AJB • Nott 201931727856 Enhancer Oligodendrocyte Enhancer Show metadata Download track Track metadata identifier NGNOTWSU2X2AJB data_source Nott_2019 Download track Download number_of_intervals 66,626 bp_covered 80,769,948 output_type enhancer peaks genome_build hg38 cell_type Oligodendrocyte biosample_type Tissue biosample_term_id CL:0000128 tissue_category Brain encode_experiment_id Not applicable biological_replicate Not reported technical_replicate Not applicable antibody H3K27ac assay Enhancer file_format bed bed3-lifted file_size 1,103,602 downloaded_date 10/02/2020 release_date 02/04/2020 date_added_to_filer 12/03/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/Nott_2019/Enhancer/bed3-lifted/hg38/formatted_output_Olig_enhancers_lifted.bed.gz processed_file_md5 f50a9bd858ae376d3c86439a26ea17bd wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/Nott_2019/Enhancer/bed3-lifted/hg38/formatted_output_Olig_enhancers_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nott_2019/Enhancer/bed3-lifted/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/Nott_2019/Enhancer/bed3-lifted/hg38/formatted_output_Olig_enhancers_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nott_2019/Enhancer/bed3-lifted/hg38/ link_out_url https://homer.ucsd.edu/iholtman/Nuclei_project/interaction/MAPS/ raw_file_url Not applicable raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/Nott_2019/enhancers/Olig2_enhancers.sorted.bigBed -P FILER2/Annotationtracks/Downloads/Nott_2019/enhancers/Olig2_enhancers.sorted.bigBed raw_file_md5 b8ac27702659800eef5ae21725412556 data_category Enhancer Genomic feature type H3K27ac enhancer peaks track_description version=2019;Original_cell_type=oligodendrocytes;doi=https://doi.org/10.1126/science.aay0793;pubmed_id=31727856;notes=Active enhancers were identified by H3K27ac peaks that were outside of H3K4me3 peaks;ages=14yo, 4yo, 18yo;sexes=M;ethnicities=His, Caucasian;brain_regions=Parietal Cortex, Temporal Cortex;pathologies_dx=Residual ateriovenous malformation, Negative pathology, Focal cortical dysplasia type Ic;dataSource_pubmed_id=31727856;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/Nott_2019.html;original_biosample_term_id=Not available;is_hg38_lifted=yes;schema=BED3 system_category Nervous life_stage Adult, Child track_name Nott_2019 Oligodendrocyte Enhancer H3K27ac-histone-mark enhancer peaks (bed3-lifted) [Life stage: Adult, Child] [Enhancer]
H3K27ac • Esophagus NGRMP234MRJ3AW • ROADMAP25693563 ChIP-seq Esophagus Histone Show metadata Download track Track metadata identifier NGRMP234MRJ3AW data_source ROADMAP Download track Download number_of_intervals 358,063 bp_covered 364,102,041 output_type peaks genome_build hg38 cell_type Esophagus biosample_type Primary tissue biosample_term_id NCIT:C12389 tissue_category Digestive encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27ac assay ChIP-seq file_format bed broadPeak-lifted file_size 11,592,327 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/27/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/UCSD.Esophagus.H3K27ac.STL003.broadPeak.lifted.bed.gz processed_file_md5 5a98576d54e874891def2eb384dfb85c wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/UCSD.Esophagus.H3K27ac.STL003.broadPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/UCSD.Esophagus.H3K27ac.STL003.broadPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/broadPeak/UCSD.Esophagus.H3K27ac.STL003.broadPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/broadpeak/UCSD.Esophagus.H3K27ac.STL003.broadPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/broadpeak/ raw_file_md5 c15809b5a87aeda015bbc67b8b625674 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27ac peaks track_description version=2015;Original_cell_type=Esophagus;Donor=STL003;schema=BED3+9;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Digestive life_stage Unknown track_name ROADMAP Esophagus ChIP-seq H3K27ac-histone-mark peaks (broadPeak-lifted) [Histone ChIP-seq peaks]
H3K27ac • Hippocampus middle NGRMP23ECYQ5LD • ROADMAP25693563 ChIP-seq Hippocampus middle Histone Show metadata Download track Track metadata identifier NGRMP23ECYQ5LD data_source ROADMAP Download track Download number_of_intervals 123,406 bp_covered 108,337,343 output_type peaks genome_build hg38 cell_type Hippocampus middle biosample_type Primary tissue biosample_term_id UBERON:0001954 tissue_category Brain encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27ac assay ChIP-seq file_format bed narrowPeak-lifted file_size 4,087,241 downloaded_date 08/15/2018 release_date 11/30/2014 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/BI.Brain_Hippocampus_Middle.H3K27ac.150.narrowPeak.lifted.bed.gz processed_file_md5 8bce06596c01c4ea5cc2508d63c33902 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/BI.Brain_Hippocampus_Middle.H3K27ac.150.narrowPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/BI.Brain_Hippocampus_Middle.H3K27ac.150.narrowPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/narrowPeak/BI.Brain_Hippocampus_Middle.H3K27ac.150.narrowPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/narrowpeak/BI.Brain_Hippocampus_Middle.H3K27ac.150.narrowPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/narrowpeak/ raw_file_md5 6fbd996c91b2e24311bc38ebbd86f803 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27ac peaks track_description version=2015;Original_cell_type=Brain Hippocampus Middle;Donor=150;schema=BED3+10;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Nervous life_stage Unknown track_name ROADMAP Hippocampus middle ChIP-seq H3K27ac-histone-mark peaks (narrowPeak-lifted) [Histone ChIP-seq peaks]
H3K27ac • CD56+ mesoderm cell NGRMP26GMAWAJD • ROADMAP25693563 ChIP-seq CD56+ mesoderm cell Histone Show metadata Download track Track metadata identifier NGRMP26GMAWAJD data_source ROADMAP Download track Download number_of_intervals 85,740 bp_covered 227,828,170 output_type peaks genome_build hg38 cell_type CD56+ mesoderm cell biosample_type In vitro differentiated cells biosample_term_id CL:0000222 tissue_category Stem Cell encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27ac assay ChIP-seq file_format bed gappedPeak-lifted file_size 4,497,331 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/28/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.hESC_Derived_CD56+_Mesoderm_Cultured_Cells.H3K27ac.DNA_Lib_3195.gappedPeak.lifted.bed.gz processed_file_md5 872f2dff1a7f341e7756fbd9bfda8a82 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.hESC_Derived_CD56+_Mesoderm_Cultured_Cells.H3K27ac.DNA_Lib_3195.gappedPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.hESC_Derived_CD56+_Mesoderm_Cultured_Cells.H3K27ac.DNA_Lib_3195.gappedPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/gappedPeak/BI.hESC_Derived_CD56+_Mesoderm_Cultured_Cells.H3K27ac.DNA_Lib_3195.gappedPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/gappedpeak/BI.hESC_Derived_CD56+_Mesoderm_Cultured_Cells.H3K27ac.DNA_Lib_3195.gappedPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/gappedpeak/ raw_file_md5 8b2d1c72f616e83c8bf15ac7a8db2808 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27ac peaks track_description version=2015;Original_cell_type=hESC Derived CD56+ Mesoderm Cultured Cells;Donor=DNA_Lib_3195;schema=BED3+15;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Stem Cell life_stage Unknown track_name ROADMAP CD56+ mesoderm cell ChIP-seq H3K27ac-histone-mark peaks (gappedPeak-lifted) [Histone ChIP-seq peaks]
H3K27ac • Neuronal progenitor cell NGRMP27YBG7BDZ • ROADMAP25693563 ChIP-seq Neuronal progenitor cell Histone Show metadata Download track Track metadata identifier NGRMP27YBG7BDZ data_source ROADMAP Download track Download number_of_intervals 33,090 bp_covered 63,752,236 output_type peaks genome_build hg38 cell_type Neuronal progenitor cell biosample_type In vitro differentiated cells biosample_term_id CL:0000047 tissue_category Stem Cell encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27ac assay ChIP-seq file_format bed gappedPeak-lifted file_size 1,644,952 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/28/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H3K27ac.AK319.gappedPeak.lifted.bed.gz processed_file_md5 9afce3ce398c972e49a62a9eaddcf330 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H3K27ac.AK319.gappedPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H3K27ac.AK319.gappedPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/gappedPeak/UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H3K27ac.AK319.gappedPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/gappedpeak/UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H3K27ac.AK319.gappedPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/gappedpeak/ raw_file_md5 a4432391d726b3fe9808ca8f2896c881 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27ac peaks track_description version=2015;Original_cell_type=H1 Derived Neuronal Progenitor Cultured Cells;Donor=AK319;schema=BED3+15;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Stem Cell life_stage Embryonic track_name ROADMAP Neuronal progenitor cell ChIP-seq H3K27ac-histone-mark peaks (gappedPeak-lifted) [Life stage: Embryonic] [Histone ChIP-seq peaks]
H3K27ac • CD184+ endoderm cell NGRMP2DTPJIH3U • ROADMAP25693563 ChIP-seq CD184+ endoderm cell Histone Show metadata Download track Track metadata identifier NGRMP2DTPJIH3U data_source ROADMAP Download track Download number_of_intervals 150,603 bp_covered 55,904,701 output_type peaks genome_build hg38 cell_type CD184+ endoderm cell biosample_type In vitro differentiated cells biosample_term_id CL:0000223 tissue_category Stem Cell encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27ac assay ChIP-seq file_format bed narrowPeak-lifted file_size 4,424,631 downloaded_date 08/15/2018 release_date 11/30/2014 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/BI.hESC_Derived_CD184+_Endoderm_Cultured_Cells.H3K27ac.DNA_Lib_3189.narrowPeak.lifted.bed.gz processed_file_md5 4c3339149768173162b8bec6e5798957 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/BI.hESC_Derived_CD184+_Endoderm_Cultured_Cells.H3K27ac.DNA_Lib_3189.narrowPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/BI.hESC_Derived_CD184+_Endoderm_Cultured_Cells.H3K27ac.DNA_Lib_3189.narrowPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/narrowPeak/BI.hESC_Derived_CD184+_Endoderm_Cultured_Cells.H3K27ac.DNA_Lib_3189.narrowPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/narrowpeak/BI.hESC_Derived_CD184+_Endoderm_Cultured_Cells.H3K27ac.DNA_Lib_3189.narrowPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/narrowpeak/ raw_file_md5 d9b161f617a7ba5d717b26e9f7bfdc03 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27ac peaks track_description version=2015;Original_cell_type=hESC Derived CD184+ Endoderm Cultured Cells;Donor=DNA_Lib_3189;schema=BED3+10;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Stem Cell life_stage Unknown track_name ROADMAP CD184+ endoderm cell ChIP-seq H3K27ac-histone-mark peaks (narrowPeak-lifted) [Histone ChIP-seq peaks]
H3K27ac • CD184+ endoderm cell NGRMP2EKW4PJBG • ROADMAP25693563 ChIP-seq CD184+ endoderm cell Histone Show metadata Download track Track metadata identifier NGRMP2EKW4PJBG data_source ROADMAP Download track Download number_of_intervals 567,088 bp_covered 733,642,824 output_type peaks genome_build hg38 cell_type CD184+ endoderm cell biosample_type In vitro differentiated cells biosample_term_id CL:0000223 tissue_category Stem Cell encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27ac assay ChIP-seq file_format bed broadPeak-lifted file_size 18,735,107 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/27/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/BI.hESC_Derived_CD184+_Endoderm_Cultured_Cells.H3K27ac.DNA_Lib_3189.broadPeak.lifted.bed.gz processed_file_md5 5c5593e0badad2a3a30b6ca0a75a3efc wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/BI.hESC_Derived_CD184+_Endoderm_Cultured_Cells.H3K27ac.DNA_Lib_3189.broadPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/BI.hESC_Derived_CD184+_Endoderm_Cultured_Cells.H3K27ac.DNA_Lib_3189.broadPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/broadPeak/BI.hESC_Derived_CD184+_Endoderm_Cultured_Cells.H3K27ac.DNA_Lib_3189.broadPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/broadpeak/BI.hESC_Derived_CD184+_Endoderm_Cultured_Cells.H3K27ac.DNA_Lib_3189.broadPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/broadpeak/ raw_file_md5 436efb08f97f25027b94e6a1e0fd5613 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27ac peaks track_description version=2015;Original_cell_type=hESC Derived CD184+ Endoderm Cultured Cells;Donor=DNA_Lib_3189;schema=BED3+9;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Stem Cell life_stage Unknown track_name ROADMAP CD184+ endoderm cell ChIP-seq H3K27ac-histone-mark peaks (broadPeak-lifted) [Histone ChIP-seq peaks]
H3K27ac • Mesendoderm NGRMP2HPAS7PRB • ROADMAP25693563 ChIP-seq Mesendoderm Histone Show metadata Download track Track metadata identifier NGRMP2HPAS7PRB data_source ROADMAP Download track Download number_of_intervals 1,393,014 bp_covered 896,099,650 output_type peaks genome_build hg38 cell_type Mesendoderm biosample_type In vitro differentiated cells biosample_term_id BTO:0003953 tissue_category Embryo encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27ac assay ChIP-seq file_format bed broadPeak-lifted file_size 44,503,202 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/27/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.H3K27ac.SK340.broadPeak.lifted.bed.gz processed_file_md5 b49fb0d5213651475851b7b9f4e06360 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.H3K27ac.SK340.broadPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.H3K27ac.SK340.broadPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/broadPeak/UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.H3K27ac.SK340.broadPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/broadpeak/UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.H3K27ac.SK340.broadPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/broadpeak/ raw_file_md5 af5c11ee0d6e8d2dd21bdbf0f4d13e2f data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27ac peaks track_description version=2015;Original_cell_type=H1 BMP4 Derived Mesendoderm Cultured Cells;Donor=SK340;schema=BED3+9;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=NTR:0000856;is_hg38_lifted=yes system_category Embryo life_stage Embryonic track_name ROADMAP Mesendoderm ChIP-seq H3K27ac-histone-mark peaks (broadPeak-lifted) [Life stage: Embryonic] [Histone ChIP-seq peaks]
H3K27ac • Mesenchymal stem cell NGRMP2REHP3TFS • ROADMAP25693563 ChIP-seq Mesenchymal stem cell Histone Show metadata Download track Track metadata identifier NGRMP2REHP3TFS data_source ROADMAP Download track Download number_of_intervals 57,116 bp_covered 118,519,206 output_type peaks genome_build hg38 cell_type Mesenchymal stem cell biosample_type Stem cell biosample_term_id CL:0000134 tissue_category Connective Tissue encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27ac assay ChIP-seq file_format bed gappedPeak-lifted file_size 3,149,839 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/28/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.H1_Derived_Mesenchymal_Stem_Cells.H3K27ac.SK436.gappedPeak.lifted.bed.gz processed_file_md5 7f3c396dd37f57671c022078d8f81acb wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.H1_Derived_Mesenchymal_Stem_Cells.H3K27ac.SK436.gappedPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.H1_Derived_Mesenchymal_Stem_Cells.H3K27ac.SK436.gappedPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/gappedPeak/UCSD.H1_Derived_Mesenchymal_Stem_Cells.H3K27ac.SK436.gappedPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/gappedpeak/UCSD.H1_Derived_Mesenchymal_Stem_Cells.H3K27ac.SK436.gappedPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/gappedpeak/ raw_file_md5 7068c5d4f8cc4e4ce1a44466fb92851e data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27ac peaks track_description version=2015;Original_cell_type=H1 Derived Mesenchymal Stem Cells;Donor=SK436;schema=BED3+15;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Skeletal life_stage Embryonic track_name ROADMAP Mesenchymal stem cell ChIP-seq H3K27ac-histone-mark peaks (gappedPeak-lifted) [Life stage: Embryonic] [Histone ChIP-seq peaks]
H3K27ac • CD4+ CD25int CD127+ Tmem cell NGRMP2RI3Z5WMK • ROADMAP25693563 ChIP-seq CD4+ CD25int CD127+ Tmem cell Histone Show metadata Download track Track metadata identifier NGRMP2RI3Z5WMK data_source ROADMAP Download track Download number_of_intervals 53,731 bp_covered 39,129,104 output_type peaks genome_build hg38 cell_type CD4+ CD25int CD127+ Tmem cell biosample_type Primary cell biosample_term_id Not available tissue_category Blood encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27ac assay ChIP-seq file_format bed narrowPeak-lifted file_size 1,778,495 downloaded_date 08/15/2018 release_date 11/30/2014 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/BI.CD4+_CD25int_CD127+_Tmem_Primary_Cells.H3K27ac.Donor_62.narrowPeak.lifted.bed.gz processed_file_md5 6c3489b9d8e356b34b77eedc0d1ffe12 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/BI.CD4+_CD25int_CD127+_Tmem_Primary_Cells.H3K27ac.Donor_62.narrowPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/BI.CD4+_CD25int_CD127+_Tmem_Primary_Cells.H3K27ac.Donor_62.narrowPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/narrowPeak/BI.CD4+_CD25int_CD127+_Tmem_Primary_Cells.H3K27ac.Donor_62.narrowPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/narrowpeak/BI.CD4+_CD25int_CD127+_Tmem_Primary_Cells.H3K27ac.Donor_62.narrowPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/narrowpeak/ raw_file_md5 eec74000313bae805ec0ebc5d18121f3 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27ac peaks track_description version=2015;Original_cell_type=CD4+ CD25int CD127+ Tmem Primary Cells;Donor=62;schema=BED3+10;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Cardiovascular life_stage Unknown track_name ROADMAP CD4+ CD25int CD127+ Tmem cell ChIP-seq H3K27ac-histone-mark peaks (narrowPeak-lifted) [Histone ChIP-seq peaks]
H3K27ac • Left ventricle NGRMP2TBG6UEAU • ROADMAP25693563 ChIP-seq Left ventricle Histone Show metadata Download track Track metadata identifier NGRMP2TBG6UEAU data_source ROADMAP Download track Download number_of_intervals 252,200 bp_covered 350,725,365 output_type peaks genome_build hg38 cell_type Left ventricle biosample_type Primary tissue biosample_term_id UBERON:0002084 tissue_category Heart encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27ac assay ChIP-seq file_format bed broadPeak-lifted file_size 8,168,407 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/27/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/UCSD.Left_Ventricle.H3K27ac.STL011.broadPeak.lifted.bed.gz processed_file_md5 5f94c9825595ff8d2ba655e602b8fadc wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/UCSD.Left_Ventricle.H3K27ac.STL011.broadPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/UCSD.Left_Ventricle.H3K27ac.STL011.broadPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/broadPeak/UCSD.Left_Ventricle.H3K27ac.STL011.broadPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/broadpeak/UCSD.Left_Ventricle.H3K27ac.STL011.broadPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/broadpeak/ raw_file_md5 e91873aa697e4387cb64be92c9f47c99 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27ac peaks track_description version=2015;Original_cell_type=Left Ventricle;Donor=STL011;schema=BED3+9;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Cardiovascular life_stage Unknown track_name ROADMAP Left ventricle ChIP-seq H3K27ac-histone-mark peaks (broadPeak-lifted) [Histone ChIP-seq peaks]
H3K27ac • Mobilized CD34+ NGRMP2UZWGFBJ4 • ROADMAP25693563 ChIP-seq Mobilized CD34+ Histone Show metadata Download track Track metadata identifier NGRMP2UZWGFBJ4 data_source ROADMAP Download track Download number_of_intervals 627,898 bp_covered 894,554,475 output_type peaks genome_build hg38 cell_type Mobilized CD34+ biosample_type Primary cell biosample_term_id CL:0000037 tissue_category Blood encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27ac assay ChIP-seq file_format bed broadPeak-lifted file_size 19,835,975 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/27/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/BI.Mobilized_CD34_Primary_Cells.H3K27ac.RO_01480.broadPeak.lifted.bed.gz processed_file_md5 8c15539fece9fa39f1b02b9c4f28a908 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/BI.Mobilized_CD34_Primary_Cells.H3K27ac.RO_01480.broadPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/BI.Mobilized_CD34_Primary_Cells.H3K27ac.RO_01480.broadPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/broadPeak/BI.Mobilized_CD34_Primary_Cells.H3K27ac.RO_01480.broadPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/broadpeak/BI.Mobilized_CD34_Primary_Cells.H3K27ac.RO_01480.broadPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/broadpeak/ raw_file_md5 fc7209e1bd90c29c6fd0bac4bc63971a data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27ac peaks track_description version=2015;Original_cell_type=Mobilized CD34 Primary Cells;Donor=RO_01480;schema=BED3+9;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Cardiovascular life_stage Unknown track_name ROADMAP Mobilized CD34+ ChIP-seq H3K27ac-histone-mark peaks (broadPeak-lifted) [Histone ChIP-seq peaks]
H3K27ac • Thymus NGRMP2VL5QPYGM • ROADMAP25693563 ChIP-seq Thymus Histone Show metadata Download track Track metadata identifier NGRMP2VL5QPYGM data_source ROADMAP Download track Download number_of_intervals 327,488 bp_covered 242,339,243 output_type peaks genome_build hg38 cell_type Thymus biosample_type Primary tissue biosample_term_id UBERON:0002370 tissue_category Immune Organ encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27ac assay ChIP-seq file_format bed broadPeak-lifted file_size 10,603,015 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/27/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/UCSD.Thymus.H3K27ac.STL001.broadPeak.lifted.bed.gz processed_file_md5 adb5eed4a5f3d8aea67100887e638b4a wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/UCSD.Thymus.H3K27ac.STL001.broadPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/UCSD.Thymus.H3K27ac.STL001.broadPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/broadPeak/UCSD.Thymus.H3K27ac.STL001.broadPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/broadpeak/UCSD.Thymus.H3K27ac.STL001.broadPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/broadpeak/ raw_file_md5 654f6d1eac11f39b81dcb273e4833249 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27ac peaks track_description version=2015;Original_cell_type=Thymus;Donor=STL001;schema=BED3+9;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Lymphatic life_stage Unknown track_name ROADMAP Thymus ChIP-seq H3K27ac-histone-mark peaks (broadPeak-lifted) [Histone ChIP-seq peaks]
H3K27ac • Stomach NGRMP2WOFSGFLS • ROADMAP25693563 ChIP-seq Stomach Histone Show metadata Download track Track metadata identifier NGRMP2WOFSGFLS data_source ROADMAP Download track Download number_of_intervals 142,886 bp_covered 233,225,675 output_type peaks genome_build hg38 cell_type Stomach biosample_type Primary tissue biosample_term_id UBERON:0000945 tissue_category Digestive encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27ac assay ChIP-seq file_format bed broadPeak-lifted file_size 4,969,620 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/27/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/UW.Fetal_Stomach.H3K27ac.H-24683.Histone.DS22929.broadPeak.lifted.bed.gz processed_file_md5 b8e7273a7eaabbe1ab682d7c82a7ae9d wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/UW.Fetal_Stomach.H3K27ac.H-24683.Histone.DS22929.broadPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/UW.Fetal_Stomach.H3K27ac.H-24683.Histone.DS22929.broadPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/broadPeak/UW.Fetal_Stomach.H3K27ac.H-24683.Histone.DS22929.broadPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/broadpeak/UW.Fetal_Stomach.H3K27ac.H-24683.Histone.DS22929.broadPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/broadpeak/ raw_file_md5 6208f67c0145439e502b1397530554ff data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27ac peaks track_description version=2015;Original_cell_type=Fetal Stomach;Donor=H-24683.Histone.DS22929;schema=BED3+9;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Digestive life_stage Fetal track_name ROADMAP Stomach ChIP-seq H3K27ac-histone-mark peaks (broadPeak-lifted) [Life stage: Fetal] [Histone ChIP-seq peaks]
H3K27ac • CD4+ CD25- CD45RO+ memory cell NGRMP2X5CR4RGY • ROADMAP25693563 ChIP-seq CD4+ CD25- CD45RO+ memory cell Histone Show metadata Download track Track metadata identifier NGRMP2X5CR4RGY data_source ROADMAP Download track Download number_of_intervals 42,551 bp_covered 42,965,601 output_type peaks genome_build hg38 cell_type CD4+ CD25- CD45RO+ memory cell biosample_type Primary cell biosample_term_id CL:0000897 tissue_category Blood encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27ac assay ChIP-seq file_format bed narrowPeak-lifted file_size 1,475,763 downloaded_date 08/15/2018 release_date 11/30/2014 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/BI.CD4+_CD25-_CD45RO+_Memory_Primary_Cells.H3K27ac.Donor_62.narrowPeak.lifted.bed.gz processed_file_md5 4d6ffde399aea1350cbd1493cf9ba6ad wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/BI.CD4+_CD25-_CD45RO+_Memory_Primary_Cells.H3K27ac.Donor_62.narrowPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/BI.CD4+_CD25-_CD45RO+_Memory_Primary_Cells.H3K27ac.Donor_62.narrowPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/narrowPeak/BI.CD4+_CD25-_CD45RO+_Memory_Primary_Cells.H3K27ac.Donor_62.narrowPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/narrowpeak/BI.CD4+_CD25-_CD45RO+_Memory_Primary_Cells.H3K27ac.Donor_62.narrowPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/narrowpeak/ raw_file_md5 65eb6be92c3bb66f27328212df80094a data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27ac peaks track_description version=2015;Original_cell_type=CD4+ CD25- CD45RO+ Memory Primary Cells;Donor=62;schema=BED3+10;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Cardiovascular life_stage Unknown track_name ROADMAP CD4+ CD25- CD45RO+ memory cell ChIP-seq H3K27ac-histone-mark peaks (narrowPeak-lifted) [Histone ChIP-seq peaks]