CBX3 • K562 NGFTB45DGFLO5J • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTB45DGFLO5J data_source Factorbook Download track Download number_of_intervals 5,024 bp_covered 105,504 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR000BRT biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CBX3 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 102,440 downloaded_date 07/10/2024 release_date 02/29/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF386ZWO_CCAYTGTCTTCTGGCYTCCAT_sorted.bed.gz processed_file_md5 550f5f0bff9dc1bad7e2adc5beb06595 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF386ZWO_CCAYTGTCTTCTGGCYTCCAT_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF386ZWO_CCAYTGTCTTCTGGCYTCCAT_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF386ZWO_CCAYTGTCTTCTGGCYTCCAT.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF386ZWO_CCAYTGTCTTCTGGCYTCCAT.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 064ee4de0d15b0f022339ecb88276619 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Richard Myers, HAIB;System=immune system;ENCODE_BED_id=ENCFF386ZWO;ENCODE_bigBed_id=ENCFF410AQU;PMID=34755879;Motif_sequence=CCAYTGTCTTCTGGCYTCCAT;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding CBX3 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BRT] [Life stage: Adult] [TFBS]
CBX3 • K562 NGFTB4QBJERUYP • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTB4QBJERUYP data_source Factorbook Download track Download number_of_intervals 2,639 bp_covered 60,697 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR000BRT biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CBX3 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 54,127 downloaded_date 07/10/2024 release_date 02/29/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF386ZWO_TTCTGCAGAARKWAAAWTKSCYT_sorted.bed.gz processed_file_md5 6591b4b563354766e3d58d5259ac53de wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF386ZWO_TTCTGCAGAARKWAAAWTKSCYT_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF386ZWO_TTCTGCAGAARKWAAAWTKSCYT_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF386ZWO_TTCTGCAGAARKWAAAWTKSCYT.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF386ZWO_TTCTGCAGAARKWAAAWTKSCYT.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 d4197c4b34eefea08962a2de421ce477 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Richard Myers, HAIB;System=immune system;ENCODE_BED_id=ENCFF386ZWO;ENCODE_bigBed_id=ENCFF410AQU;PMID=34755879;Motif_sequence=TTCTGCAGAARKWAAAWTKSCYT;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding CBX3 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BRT] [Life stage: Adult] [TFBS]
CBX3 • K562 NGFTB6XJSICOZM • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTB6XJSICOZM data_source Factorbook Download track Download number_of_intervals 3,248 bp_covered 68,208 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR000BRT biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CBX3 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 64,968 downloaded_date 07/10/2024 release_date 02/29/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF386ZWO_TTCTGATGAGAARTCWGCTGT_sorted.bed.gz processed_file_md5 551a9efce4ae38f2227d4f2329a8f89a wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF386ZWO_TTCTGATGAGAARTCWGCTGT_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF386ZWO_TTCTGATGAGAARTCWGCTGT_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF386ZWO_TTCTGATGAGAARTCWGCTGT.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF386ZWO_TTCTGATGAGAARTCWGCTGT.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 d897c7451ace4a9ba05ac5c612caea7b data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Richard Myers, HAIB;System=immune system;ENCODE_BED_id=ENCFF386ZWO;ENCODE_bigBed_id=ENCFF410AQU;PMID=34755879;Motif_sequence=TTCTGATGAGAARTCWGCTGT;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding CBX3 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BRT] [Life stage: Adult] [TFBS]
CBX3 • HCT116 NGFTB7EGZECYS2 • Factorbook34755879 Motif finding HCT116 TFBS Show metadata Download track Track metadata identifier NGFTB7EGZECYS2 data_source Factorbook Download track Download number_of_intervals 19,055 bp_covered 209,605 output_type transcription factor binding sites all genome_build hg38 cell_type HCT116 biosample_type Cell line biosample_term_id EFO:0002824 tissue_category Digestive encode_experiment_id ENCSR000BUH biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CBX3 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 247,348 downloaded_date 07/10/2024 release_date 09/10/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF423XAH_TGASTCATBVT_sorted.bed.gz processed_file_md5 8ebe3ab1d8186c7a51ef1d51d802eac8 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF423XAH_TGASTCATBVT_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF423XAH_TGASTCATBVT_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF423XAH_TGASTCATBVT.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF423XAH_TGASTCATBVT.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 f32a6dbf73c9154513110384f6e62401 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens HCT116;Original_cell_type=HCT116;Lab=Richard Myers, HAIB;System=digestive system;ENCODE_BED_id=ENCFF423XAH;ENCODE_bigBed_id=ENCFF947BOL;PMID=34755879;Motif_sequence=TGASTCATBVT;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002824;is_hg38_lifted=no system_category Digestive life_stage Adult track_name Factorbook HCT116 (repl. 1, 2) Motif finding CBX3 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BUH] [Life stage: Adult] [TFBS]
CBX3 • K562 NGFTB7WTGTJLBY • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTB7WTGTJLBY data_source Factorbook Download track Download number_of_intervals 274 bp_covered 5,754 output_type transcription factor binding sites significant genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR000BRT biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CBX3 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 4,898 downloaded_date 07/10/2024 release_date 02/29/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF386ZWO_CCAYTGTCTTCTGGCYTCCAT_filtered.bed.gz processed_file_md5 77194651d3a292f8fce90959eb68f6ce wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF386ZWO_CCAYTGTCTTCTGGCYTCCAT_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF386ZWO_CCAYTGTCTTCTGGCYTCCAT_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF386ZWO_CCAYTGTCTTCTGGCYTCCAT.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF386ZWO_CCAYTGTCTTCTGGCYTCCAT.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 064ee4de0d15b0f022339ecb88276619 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Richard Myers, HAIB;System=immune system;ENCODE_BED_id=ENCFF386ZWO;ENCODE_bigBed_id=ENCFF410AQU;PMID=34755879;Motif_sequence=CCAYTGTCTTCTGGCYTCCAT;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding CBX3 transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR000BRT] [Life stage: Adult] [TFBS]
CBX3 • K562 NGFTBETDJXUJBZ • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBETDJXUJBZ data_source Factorbook Download track Download number_of_intervals 2,967 bp_covered 86,043 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR000BRT biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CBX3 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 69,485 downloaded_date 07/10/2024 release_date 02/29/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF386ZWO_BGCCATTGTTMCATCYRYRAGBRGCACCC_sorted.bed.gz processed_file_md5 7468619da8e152a909b96d20d3518d9a wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF386ZWO_BGCCATTGTTMCATCYRYRAGBRGCACCC_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF386ZWO_BGCCATTGTTMCATCYRYRAGBRGCACCC_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF386ZWO_BGCCATTGTTMCATCYRYRAGBRGCACCC.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF386ZWO_BGCCATTGTTMCATCYRYRAGBRGCACCC.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 91a09d746930366ab55b2581a82482df data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Richard Myers, HAIB;System=immune system;ENCODE_BED_id=ENCFF386ZWO;ENCODE_bigBed_id=ENCFF410AQU;PMID=34755879;Motif_sequence=BGCCATTGTTMCATCYRYRAGBRGCACCC;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding CBX3 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BRT] [Life stage: Adult] [TFBS]
CBX3 • K562 NGFTBIK44NZ3YN • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBIK44NZ3YN data_source Factorbook Download track Download number_of_intervals 258 bp_covered 5,418 output_type transcription factor binding sites significant genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR000BRT biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CBX3 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 4,373 downloaded_date 07/10/2024 release_date 02/29/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF386ZWO_TTCTGATGAGAARTCWGCTGT_filtered.bed.gz processed_file_md5 a0722deed2f9204fa09e1948e9dfee02 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF386ZWO_TTCTGATGAGAARTCWGCTGT_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF386ZWO_TTCTGATGAGAARTCWGCTGT_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF386ZWO_TTCTGATGAGAARTCWGCTGT.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF386ZWO_TTCTGATGAGAARTCWGCTGT.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 d897c7451ace4a9ba05ac5c612caea7b data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Richard Myers, HAIB;System=immune system;ENCODE_BED_id=ENCFF386ZWO;ENCODE_bigBed_id=ENCFF410AQU;PMID=34755879;Motif_sequence=TTCTGATGAGAARTCWGCTGT;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding CBX3 transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR000BRT] [Life stage: Adult] [TFBS]
CBX3 • K562 NGFTBPVOD7VVI2 • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBPVOD7VVI2 data_source Factorbook Download track Download number_of_intervals 121 bp_covered 3,509 output_type transcription factor binding sites significant genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR000BRT biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CBX3 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 2,671 downloaded_date 07/10/2024 release_date 02/29/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF386ZWO_BGCCATTGTTMCATCYRYRAGBRGCACCC_filtered.bed.gz processed_file_md5 76fa190c4059ac5908348ba4f1cde7c3 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF386ZWO_BGCCATTGTTMCATCYRYRAGBRGCACCC_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF386ZWO_BGCCATTGTTMCATCYRYRAGBRGCACCC_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF386ZWO_BGCCATTGTTMCATCYRYRAGBRGCACCC.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF386ZWO_BGCCATTGTTMCATCYRYRAGBRGCACCC.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 91a09d746930366ab55b2581a82482df data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Richard Myers, HAIB;System=immune system;ENCODE_BED_id=ENCFF386ZWO;ENCODE_bigBed_id=ENCFF410AQU;PMID=34755879;Motif_sequence=BGCCATTGTTMCATCYRYRAGBRGCACCC;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding CBX3 transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR000BRT] [Life stage: Adult] [TFBS]
CBX3 • K562 NGFTBQWONGNV2V • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBQWONGNV2V data_source Factorbook Download track Download number_of_intervals 157 bp_covered 3,611 output_type transcription factor binding sites significant genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR000BRT biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CBX3 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 2,375 downloaded_date 07/10/2024 release_date 02/29/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF386ZWO_TTCTGCAGAARKWAAAWTKSCYT_filtered.bed.gz processed_file_md5 46fbba49812400fd23a5e2031f402d26 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF386ZWO_TTCTGCAGAARKWAAAWTKSCYT_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF386ZWO_TTCTGCAGAARKWAAAWTKSCYT_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF386ZWO_TTCTGCAGAARKWAAAWTKSCYT.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF386ZWO_TTCTGCAGAARKWAAAWTKSCYT.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 d4197c4b34eefea08962a2de421ce477 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Richard Myers, HAIB;System=immune system;ENCODE_BED_id=ENCFF386ZWO;ENCODE_bigBed_id=ENCFF410AQU;PMID=34755879;Motif_sequence=TTCTGCAGAARKWAAAWTKSCYT;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding CBX3 transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR000BRT] [Life stage: Adult] [TFBS]
CBX3 • K562 NGFTBUT5SIMVEJ • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBUT5SIMVEJ data_source Factorbook Download track Download number_of_intervals 2,472 bp_covered 51,912 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR000BRT biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CBX3 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 49,141 downloaded_date 07/10/2024 release_date 02/29/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF386ZWO_AGCACTCAGACAAARRDTTTY_sorted.bed.gz processed_file_md5 ce3f9221bbeff9f68846b37d6319c4f7 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF386ZWO_AGCACTCAGACAAARRDTTTY_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF386ZWO_AGCACTCAGACAAARRDTTTY_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF386ZWO_AGCACTCAGACAAARRDTTTY.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF386ZWO_AGCACTCAGACAAARRDTTTY.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 eba9c037b2e55bac98d7f412706c4a90 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Richard Myers, HAIB;System=immune system;ENCODE_BED_id=ENCFF386ZWO;ENCODE_bigBed_id=ENCFF410AQU;PMID=34755879;Motif_sequence=AGCACTCAGACAAARRDTTTY;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding CBX3 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BRT] [Life stage: Adult] [TFBS]
CBX3 • K562 NGFTBXEOR6PGJ5 • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBXEOR6PGJ5 data_source Factorbook Download track Download number_of_intervals 44 bp_covered 924 output_type transcription factor binding sites significant genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR000BRT biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CBX3 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 923 downloaded_date 07/10/2024 release_date 02/29/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF386ZWO_AGCACTCAGACAAARRDTTTY_filtered.bed.gz processed_file_md5 e4d2155088db57864b0ad49e4dfcc826 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF386ZWO_AGCACTCAGACAAARRDTTTY_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF386ZWO_AGCACTCAGACAAARRDTTTY_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF386ZWO_AGCACTCAGACAAARRDTTTY.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF386ZWO_AGCACTCAGACAAARRDTTTY.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 eba9c037b2e55bac98d7f412706c4a90 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Richard Myers, HAIB;System=immune system;ENCODE_BED_id=ENCFF386ZWO;ENCODE_bigBed_id=ENCFF410AQU;PMID=34755879;Motif_sequence=AGCACTCAGACAAARRDTTTY;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding CBX3 transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR000BRT] [Life stage: Adult] [TFBS]
CBX5 • H1-hESC NGENC2OHPKWUV7 • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq H1-hESC TF Show metadata Download track Track metadata identifier NGENC2OHPKWUV7 data_source ENCODE Download track Download number_of_intervals 330 bp_covered 170,611 output_type conservative IDR thresholded peaks genome_build hg38 cell_type H1-hESC biosample_type Stem cell biosample_term_id EFO:0003042 tissue_category Embryo encode_experiment_id ENCSR814KIO biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CBX5 assay TF ChIP-seq file_format bed narrowPeak file_size 6,178 downloaded_date 06/12/2022 release_date 03/19/2021 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF330LTY.bed.gz processed_file_md5 fb984e6fffaf96b39b3104f833c03afc wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF330LTY.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF330LTY.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF330LTY/@@download/ENCFF330LTY.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF330LTY.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 1622226119e5a1e7a3aad7f463e255c1 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq conservative IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens H1;Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_2_2,RegulomeDB_2_1,RegulomeDB_1_0,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_0;Life_stage_age=NR;Reference=NR;External_resources=GEO:GSE123229;Project=ENCODE;Award=U54HG006991;Experiment_date_released=2016-12-06,2011-02-10;Submitted_track_name=rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=H1;ENCODE_cell_slims=embryonic cell,stem cell;ENCODE_system_slims=NR;ENCODE_biosample_term_synonyms=H1;Analysis_title=ENCODE4 v1.7.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0003042;is_hg38_lifted=no system_category Embryo life_stage Embryonic track_name ENCODE H1-hESC (repl. 1, 2) TF ChIP-seq CBX5 conservative IDR thresholded peaks (narrowPeak) [Experiment: ENCSR814KIO] [Life stage: Embryonic] [TF ChIP-seq peaks]
CBX5 • HepG2 NGENC2Q3PAMCHZ • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq HepG2 TF Show metadata Download track Track metadata identifier NGENC2Q3PAMCHZ data_source ENCODE Download track Download number_of_intervals 2,861 bp_covered 842,131 output_type IDR thresholded peaks genome_build hg38 cell_type HepG2 biosample_type Cell line biosample_term_id EFO:0001187 tissue_category Liver encode_experiment_id ENCSR892RCP biological_replicate 2 technical_replicate 2_1 antibody CBX5 assay TF ChIP-seq file_format bed narrowPeak file_size 50,206 downloaded_date 06/12/2022 release_date 07/01/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF599SNL.bed.gz processed_file_md5 2baf58a0730a56335546fb7a81e0d38e wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF599SNL.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF599SNL.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF599SNL/@@download/ENCFF599SNL.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF599SNL.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 cfc5adce330c7c69204bdbdb389aaf5a data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens CBX5;Lab=Richard Myers, HAIB;ENCODE_internal_tags=RegulomeDB_2_2,RegulomeDB_2_1;Life_stage_age=child 15 years;Reference=NR;External_resources=GEO:GSE170525;Project=ENCODE;Award=UM1HG009411;Experiment_date_released=2020-07-09,2016-10-11;Submitted_track_name=rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=HepG2;ENCODE_cell_slims=epithelial cell,cancer cell;ENCODE_system_slims=exocrine system,endocrine system,digestive system;ENCODE_biosample_term_synonyms=Hep-G2,HepG2 cell;Analysis_title=ENCODE4 v1.4.0 GRCh38;GM=[Method:CRISPR|Category:insertion];schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001187;is_hg38_lifted=no system_category Digestive life_stage Child track_name ENCODE HepG2 (repl. 2) TF ChIP-seq CBX5 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR892RCP] [Life stage: Child] [TF ChIP-seq peaks]
CBX5 • H1-hESC NGENC5JSD5BMR3 • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq H1-hESC TF Show metadata Download track Track metadata identifier NGENC5JSD5BMR3 data_source ENCODE Download track Download number_of_intervals 97 bp_covered 40,352 output_type IDR thresholded peaks genome_build hg38 cell_type H1-hESC biosample_type Stem cell biosample_term_id EFO:0003042 tissue_category Embryo encode_experiment_id ENCSR814KIO biological_replicate 1 technical_replicate 1_1 antibody CBX5 assay TF ChIP-seq file_format bed narrowPeak file_size 1,899 downloaded_date 06/12/2022 release_date 03/19/2021 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF661OZE.bed.gz processed_file_md5 a3ef49e17dd281d26878d463a12c8dc7 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF661OZE.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF661OZE.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF661OZE/@@download/ENCFF661OZE.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF661OZE.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 b76ef45d4aa71331649ad66e7cf70292 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens H1;Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_2_2,RegulomeDB_2_1,RegulomeDB_1_0,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_0;Life_stage_age=NR;Reference=NR;External_resources=GEO:GSE123229;Project=ENCODE;Award=U54HG006991;Experiment_date_released=2016-12-06,2011-02-10;Submitted_track_name=rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=H1;ENCODE_cell_slims=embryonic cell,stem cell;ENCODE_system_slims=NR;ENCODE_biosample_term_synonyms=H1;Analysis_title=ENCODE4 v1.7.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0003042;is_hg38_lifted=no system_category Embryo life_stage Embryonic track_name ENCODE H1-hESC (repl. 1) TF ChIP-seq CBX5 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR814KIO] [Life stage: Embryonic] [TF ChIP-seq peaks]
CBX5 • H1-hESC NGENC7ROX6XDFR • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq H1-hESC TF Show metadata Download track Track metadata identifier NGENC7ROX6XDFR data_source ENCODE Download track Download number_of_intervals 376 bp_covered 195,460 output_type IDR thresholded peaks genome_build hg38 cell_type H1-hESC biosample_type Stem cell biosample_term_id EFO:0003042 tissue_category Embryo encode_experiment_id ENCSR814KIO biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CBX5 assay TF ChIP-seq file_format bed narrowPeak file_size 6,965 downloaded_date 06/12/2022 release_date 03/19/2021 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF210ZZG.bed.gz processed_file_md5 3912fafa411bcc56fd8819cb641c3ca1 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF210ZZG.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF210ZZG.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF210ZZG/@@download/ENCFF210ZZG.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF210ZZG.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 5e2255ed3001dd553d032dd99d6337c4 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens H1;Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_2_2,RegulomeDB_2_1,RegulomeDB_1_0,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_0;Life_stage_age=NR;Reference=NR;External_resources=GEO:GSE123229;Project=ENCODE;Award=U54HG006991;Experiment_date_released=2016-12-06,2011-02-10;Submitted_track_name=pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=H1;ENCODE_cell_slims=embryonic cell,stem cell;ENCODE_system_slims=NR;ENCODE_biosample_term_synonyms=H1;Analysis_title=ENCODE4 v1.7.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0003042;is_hg38_lifted=no system_category Embryo life_stage Embryonic track_name ENCODE H1-hESC (repl. 1, 2) TF ChIP-seq CBX5 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR814KIO] [Life stage: Embryonic] [TF ChIP-seq peaks]
CBX5 • H1-hESC NGENCABUQ6ODLL • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq H1-hESC TF Show metadata Download track Track metadata identifier NGENCABUQ6ODLL data_source ENCODE Download track Download number_of_intervals 139 bp_covered 85,799 output_type IDR thresholded peaks genome_build hg38 cell_type H1-hESC biosample_type Stem cell biosample_term_id EFO:0003042 tissue_category Embryo encode_experiment_id ENCSR814KIO biological_replicate 2 technical_replicate 2_1 antibody CBX5 assay TF ChIP-seq file_format bed narrowPeak file_size 2,709 downloaded_date 06/12/2022 release_date 03/19/2021 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF056JBJ.bed.gz processed_file_md5 7778fe355e5dcf2953a287ea98938547 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF056JBJ.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF056JBJ.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF056JBJ/@@download/ENCFF056JBJ.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF056JBJ.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 cf0271a1b6fdc3c26c0b360a12e6046f data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens H1;Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_2_2,RegulomeDB_2_1,RegulomeDB_1_0,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_0;Life_stage_age=NR;Reference=NR;External_resources=GEO:GSE123229;Project=ENCODE;Award=U54HG006991;Experiment_date_released=2016-12-06,2011-02-10;Submitted_track_name=rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=H1;ENCODE_cell_slims=embryonic cell,stem cell;ENCODE_system_slims=NR;ENCODE_biosample_term_synonyms=H1;Analysis_title=ENCODE4 v1.7.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0003042;is_hg38_lifted=no system_category Embryo life_stage Embryonic track_name ENCODE H1-hESC (repl. 2) TF ChIP-seq CBX5 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR814KIO] [Life stage: Embryonic] [TF ChIP-seq peaks]
CBX5 • K562 NGENCDFECMIXDZ • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq K562 TF Show metadata Download track Track metadata identifier NGENCDFECMIXDZ data_source ENCODE Download track Download number_of_intervals 4,344 bp_covered 1,207,732 output_type IDR thresholded peaks genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR272JAT biological_replicate 2 technical_replicate 2_1 antibody CBX5 assay TF ChIP-seq file_format bed narrowPeak file_size 78,459 downloaded_date 06/12/2022 release_date 02/04/2021 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF915SJW.bed.gz processed_file_md5 e839737ced4085840540cef09b4edbb3 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF915SJW.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF915SJW.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF915SJW/@@download/ENCFF915SJW.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF915SJW.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 736639a0616fa5cc01315e9818b013ce data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens K562;Lab=Richard Myers, HAIB;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=adult 53 years;Reference=PMID:32728046;External_resources=GEO:GSE96017;Project=ENCODE;Award=U54HG006998;Experiment_date_released=2014-07-07;Submitted_track_name=rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=hematopoietic cell,cancer cell,leukocyte;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=K-562, K562 cell,K-562 cell;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name ENCODE K562 (repl. 2) TF ChIP-seq CBX5 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR272JAT] [Life stage: Adult] [TF ChIP-seq peaks]
CBX5 • K562 NGENCF4BPDHTSS • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq K562 TF Show metadata Download track Track metadata identifier NGENCF4BPDHTSS data_source ENCODE Download track Download number_of_intervals 5,299 bp_covered 1,577,921 output_type conservative IDR thresholded peaks genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR272JAT biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CBX5 assay TF ChIP-seq file_format bed narrowPeak file_size 97,991 downloaded_date 06/12/2022 release_date 02/04/2021 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF603APG.bed.gz processed_file_md5 90357239a4eca1198516c43fd8b61b7e wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF603APG.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF603APG.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF603APG/@@download/ENCFF603APG.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF603APG.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 e76fdfcae6012f1ececf6e80aea9e73c data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq conservative IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens K562;Lab=Richard Myers, HAIB;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=adult 53 years;Reference=PMID:32728046;External_resources=GEO:GSE96017;Project=ENCODE;Award=U54HG006998;Experiment_date_released=2014-07-07;Submitted_track_name=rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=hematopoietic cell,cancer cell,leukocyte;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=K-562, K562 cell,K-562 cell;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name ENCODE K562 (repl. 1, 2) TF ChIP-seq CBX5 conservative IDR thresholded peaks (narrowPeak) [Experiment: ENCSR272JAT] [Life stage: Adult] [TF ChIP-seq peaks]
CBX5 • HepG2 NGENCG3Y7DEYS6 • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq HepG2 TF Show metadata Download track Track metadata identifier NGENCG3Y7DEYS6 data_source ENCODE Download track Download number_of_intervals 18,382 bp_covered 6,596,840 output_type IDR thresholded peaks genome_build hg38 cell_type HepG2 biosample_type Cell line biosample_term_id EFO:0001187 tissue_category Liver encode_experiment_id ENCSR892RCP biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CBX5 assay TF ChIP-seq file_format bed narrowPeak file_size 316,455 downloaded_date 06/12/2022 release_date 07/01/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF251YQZ.bed.gz processed_file_md5 a8aa7ed33697195fadc2846c1c2d8e9c wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF251YQZ.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF251YQZ.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF251YQZ/@@download/ENCFF251YQZ.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF251YQZ.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 178ba3cb1aae9309e0c7309177ac6c26 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens CBX5;Lab=Richard Myers, HAIB;ENCODE_internal_tags=RegulomeDB_2_2,RegulomeDB_2_1;Life_stage_age=child 15 years;Reference=NR;External_resources=GEO:GSE170525;Project=ENCODE;Award=UM1HG009411;Experiment_date_released=2020-07-09,2016-10-11;Submitted_track_name=pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=HepG2;ENCODE_cell_slims=epithelial cell,cancer cell;ENCODE_system_slims=exocrine system,endocrine system,digestive system;ENCODE_biosample_term_synonyms=Hep-G2,HepG2 cell;Analysis_title=ENCODE4 v1.4.0 GRCh38;GM=[Method:CRISPR|Category:insertion];schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001187;is_hg38_lifted=no system_category Digestive life_stage Child track_name ENCODE HepG2 (repl. 1, 2) TF ChIP-seq CBX5 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR892RCP] [Life stage: Child] [TF ChIP-seq peaks]
CBX5 • GM12878 NGENCI5YOOBCUO • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq GM12878 TF Show metadata Download track Track metadata identifier NGENCI5YOOBCUO data_source ENCODE Download track Download number_of_intervals 12,351 bp_covered 5,534,049 output_type conservative IDR thresholded peaks genome_build hg38 cell_type GM12878 biosample_type Cell line biosample_term_id EFO:0002784 tissue_category Blood encode_experiment_id ENCSR372GIN biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CBX5 assay TF ChIP-seq file_format bed narrowPeak file_size 241,546 downloaded_date 06/12/2022 release_date 12/04/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF276SMF.bed.gz processed_file_md5 ee08a2b703babbea2b21886f734869bd wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF276SMF.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF276SMF.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF276SMF/@@download/ENCFF276SMF.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF276SMF.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 fc1fe27c031114ffbfa4aa1a0297979a data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq conservative IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens GM12878;Lab=Richard Myers, HAIB;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=NR;Reference=PMID:32728046;External_resources=GEO:GSE96139;Project=ENCODE;Award=U54HG006998;Experiment_date_released=2016-10-27,2012-09-10;Submitted_track_name=rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=GM12878;ENCODE_cell_slims=hematopoietic cell,B cell,leukocyte;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002784;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name ENCODE GM12878 (repl. 1, 2) TF ChIP-seq CBX5 conservative IDR thresholded peaks (narrowPeak) [Experiment: ENCSR372GIN] [Life stage: Adult] [TF ChIP-seq peaks]