CBX5 • K562 NGENCI6EG43DN6 • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq K562 TF Show metadata Download track Track metadata identifier NGENCI6EG43DN6 data_source ENCODE Download track Download number_of_intervals 2,066 bp_covered 912,713 output_type IDR thresholded peaks genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR272JAT biological_replicate 1 technical_replicate 1_1 antibody CBX5 assay TF ChIP-seq file_format bed narrowPeak file_size 38,931 downloaded_date 06/12/2022 release_date 02/04/2021 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF097YEK.bed.gz processed_file_md5 dec65f0946b16f17dccd39c9beb96179 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF097YEK.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF097YEK.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF097YEK/@@download/ENCFF097YEK.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF097YEK.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 24b49bb62b2a1eba9799eb550ad2991a data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens K562;Lab=Richard Myers, HAIB;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=adult 53 years;Reference=PMID:32728046;External_resources=GEO:GSE96017;Project=ENCODE;Award=U54HG006998;Experiment_date_released=2014-07-07;Submitted_track_name=rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=hematopoietic cell,cancer cell,leukocyte;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=K-562, K562 cell,K-562 cell;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name ENCODE K562 (repl. 1) TF ChIP-seq CBX5 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR272JAT] [Life stage: Adult] [TF ChIP-seq peaks]
CBX5 • K562 NGENCIKP5MHTUX • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq K562 TF Show metadata Download track Track metadata identifier NGENCIKP5MHTUX data_source ENCODE Download track Download number_of_intervals 6,985 bp_covered 2,110,721 output_type IDR thresholded peaks genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR272JAT biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CBX5 assay TF ChIP-seq file_format bed narrowPeak file_size 130,417 downloaded_date 06/12/2022 release_date 02/04/2021 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF188CYP.bed.gz processed_file_md5 3b98940189af7992b1271533d09c5aed wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF188CYP.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF188CYP.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF188CYP/@@download/ENCFF188CYP.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF188CYP.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 d86faa9693e8785e6c406cc53f17c874 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens K562;Lab=Richard Myers, HAIB;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=adult 53 years;Reference=PMID:32728046;External_resources=GEO:GSE96017;Project=ENCODE;Award=U54HG006998;Experiment_date_released=2014-07-07;Submitted_track_name=pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=hematopoietic cell,cancer cell,leukocyte;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=K-562, K562 cell,K-562 cell;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name ENCODE K562 (repl. 1, 2) TF ChIP-seq CBX5 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR272JAT] [Life stage: Adult] [TF ChIP-seq peaks]
CBX5 • GM12878 NGENCJJ4SKR7WN • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq GM12878 TF Show metadata Download track Track metadata identifier NGENCJJ4SKR7WN data_source ENCODE Download track Download number_of_intervals 15,452 bp_covered 6,970,137 output_type IDR thresholded peaks genome_build hg38 cell_type GM12878 biosample_type Cell line biosample_term_id EFO:0002784 tissue_category Blood encode_experiment_id ENCSR372GIN biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CBX5 assay TF ChIP-seq file_format bed narrowPeak file_size 301,752 downloaded_date 06/12/2022 release_date 12/04/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF542UDC.bed.gz processed_file_md5 5d373d86c166b567cc7e973a6c09953b wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF542UDC.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF542UDC.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF542UDC/@@download/ENCFF542UDC.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF542UDC.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 9b1f2fb9ee446f4cb5d75a8db0f76dae data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens GM12878;Lab=Richard Myers, HAIB;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=NR;Reference=PMID:32728046;External_resources=GEO:GSE96139;Project=ENCODE;Award=U54HG006998;Experiment_date_released=2016-10-27,2012-09-10;Submitted_track_name=pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=GM12878;ENCODE_cell_slims=hematopoietic cell,B cell,leukocyte;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002784;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name ENCODE GM12878 (repl. 1, 2) TF ChIP-seq CBX5 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR372GIN] [Life stage: Adult] [TF ChIP-seq peaks]
CBX5 • GM12878 NGENCQB2JRWZKF • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq GM12878 TF Show metadata Download track Track metadata identifier NGENCQB2JRWZKF data_source ENCODE Download track Download number_of_intervals 6,726 bp_covered 2,529,929 output_type IDR thresholded peaks genome_build hg38 cell_type GM12878 biosample_type Cell line biosample_term_id EFO:0002784 tissue_category Blood encode_experiment_id ENCSR372GIN biological_replicate 1 technical_replicate 1_1 antibody CBX5 assay TF ChIP-seq file_format bed narrowPeak file_size 129,503 downloaded_date 06/12/2022 release_date 12/04/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF448ZJK.bed.gz processed_file_md5 391c021e05c49e3b1d9307c84cc6ff6b wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF448ZJK.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF448ZJK.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF448ZJK/@@download/ENCFF448ZJK.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF448ZJK.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 c9a48f347a48d2d1135937fb0f4cb13a data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens GM12878;Lab=Richard Myers, HAIB;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=NR;Reference=PMID:32728046;External_resources=GEO:GSE96139;Project=ENCODE;Award=U54HG006998;Experiment_date_released=2016-10-27,2012-09-10;Submitted_track_name=rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=GM12878;ENCODE_cell_slims=hematopoietic cell,B cell,leukocyte;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002784;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name ENCODE GM12878 (repl. 1) TF ChIP-seq CBX5 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR372GIN] [Life stage: Adult] [TF ChIP-seq peaks]
CBX5 • HepG2 NGENCTY7SXWJ7T • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq HepG2 TF Show metadata Download track Track metadata identifier NGENCTY7SXWJ7T data_source ENCODE Download track Download number_of_intervals 18,532 bp_covered 7,477,147 output_type IDR thresholded peaks genome_build hg38 cell_type HepG2 biosample_type Cell line biosample_term_id EFO:0001187 tissue_category Liver encode_experiment_id ENCSR892RCP biological_replicate 1 technical_replicate 1_1 antibody CBX5 assay TF ChIP-seq file_format bed narrowPeak file_size 326,054 downloaded_date 06/12/2022 release_date 07/01/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF687GBS.bed.gz processed_file_md5 e765db2dc98e1fafa2d037f664533903 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF687GBS.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF687GBS.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF687GBS/@@download/ENCFF687GBS.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF687GBS.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 2195b88ff072f29945491c23358b3c1c data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens CBX5;Lab=Richard Myers, HAIB;ENCODE_internal_tags=RegulomeDB_2_2,RegulomeDB_2_1;Life_stage_age=child 15 years;Reference=NR;External_resources=GEO:GSE170525;Project=ENCODE;Award=UM1HG009411;Experiment_date_released=2020-07-09,2016-10-11;Submitted_track_name=rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=HepG2;ENCODE_cell_slims=epithelial cell,cancer cell;ENCODE_system_slims=exocrine system,endocrine system,digestive system;ENCODE_biosample_term_synonyms=Hep-G2,HepG2 cell;Analysis_title=ENCODE4 v1.4.0 GRCh38;GM=[Method:CRISPR|Category:insertion];schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001187;is_hg38_lifted=no system_category Digestive life_stage Child track_name ENCODE HepG2 (repl. 1) TF ChIP-seq CBX5 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR892RCP] [Life stage: Child] [TF ChIP-seq peaks]
CBX5 • GM12878 NGENCXIA6NOZ6Y • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq GM12878 TF Show metadata Download track Track metadata identifier NGENCXIA6NOZ6Y data_source ENCODE Download track Download number_of_intervals 5,661 bp_covered 2,489,435 output_type IDR thresholded peaks genome_build hg38 cell_type GM12878 biosample_type Cell line biosample_term_id EFO:0002784 tissue_category Blood encode_experiment_id ENCSR372GIN biological_replicate 2 technical_replicate 2_1 antibody CBX5 assay TF ChIP-seq file_format bed narrowPeak file_size 108,543 downloaded_date 06/12/2022 release_date 12/04/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF883XEH.bed.gz processed_file_md5 d13f69bfc66d6536d36184f748e762cc wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF883XEH.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF883XEH.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF883XEH/@@download/ENCFF883XEH.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF883XEH.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 ddc6361fe3899502b36ab0690d134126 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens GM12878;Lab=Richard Myers, HAIB;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=NR;Reference=PMID:32728046;External_resources=GEO:GSE96139;Project=ENCODE;Award=U54HG006998;Experiment_date_released=2016-10-27,2012-09-10;Submitted_track_name=rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=GM12878;ENCODE_cell_slims=hematopoietic cell,B cell,leukocyte;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002784;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name ENCODE GM12878 (repl. 2) TF ChIP-seq CBX5 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR372GIN] [Life stage: Adult] [TF ChIP-seq peaks]
CBX5 • HepG2 NGENCZKV5MZ4RY • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq HepG2 TF Show metadata Download track Track metadata identifier NGENCZKV5MZ4RY data_source ENCODE Download track Download number_of_intervals 12,221 bp_covered 4,286,065 output_type conservative IDR thresholded peaks genome_build hg38 cell_type HepG2 biosample_type Cell line biosample_term_id EFO:0001187 tissue_category Liver encode_experiment_id ENCSR892RCP biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CBX5 assay TF ChIP-seq file_format bed narrowPeak file_size 214,109 downloaded_date 06/12/2022 release_date 07/01/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF938QDG.bed.gz processed_file_md5 6204a9074588ec41a4f1e92fae8cd81b wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF938QDG.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF938QDG.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF938QDG/@@download/ENCFF938QDG.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF938QDG.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 5e38d7d977f6e15048b1c06efe35200b data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq conservative IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens CBX5;Lab=Richard Myers, HAIB;ENCODE_internal_tags=RegulomeDB_2_2,RegulomeDB_2_1;Life_stage_age=child 15 years;Reference=NR;External_resources=GEO:GSE170525;Project=ENCODE;Award=UM1HG009411;Experiment_date_released=2020-07-09,2016-10-11;Submitted_track_name=rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=HepG2;ENCODE_cell_slims=epithelial cell,cancer cell;ENCODE_system_slims=exocrine system,endocrine system,digestive system;ENCODE_biosample_term_synonyms=Hep-G2,HepG2 cell;Analysis_title=ENCODE4 v1.4.0 GRCh38;GM=[Method:CRISPR|Category:insertion];schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001187;is_hg38_lifted=no system_category Digestive life_stage Child track_name ENCODE HepG2 (repl. 1, 2) TF ChIP-seq CBX5 conservative IDR thresholded peaks (narrowPeak) [Experiment: ENCSR892RCP] [Life stage: Child] [TF ChIP-seq peaks]
CBX5 • GM12878 NGFTB2AB2W5CJS • Factorbook34755879 Motif finding GM12878 TFBS Show metadata Download track Track metadata identifier NGFTB2AB2W5CJS data_source Factorbook Download track Download number_of_intervals 2,842 bp_covered 48,314 output_type transcription factor binding sites all genome_build hg38 cell_type GM12878 biosample_type Cell line biosample_term_id EFO:0002784 tissue_category Blood encode_experiment_id ENCSR372GIN biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CBX5 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 49,774 downloaded_date 07/10/2024 release_date 10/27/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF864AYJ_TTCTCAKCARRRMMAWT_sorted.bed.gz processed_file_md5 f44da855c24cd198ca0a740b61ef75b7 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF864AYJ_TTCTCAKCARRRMMAWT_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF864AYJ_TTCTCAKCARRRMMAWT_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF864AYJ_TTCTCAKCARRRMMAWT.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF864AYJ_TTCTCAKCARRRMMAWT.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 c45fc8ddbfbb0d13a7be7e87c05a2af8 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens GM12878;Original_cell_type=GM12878;Lab=Richard Myers, HAIB;System=immune system;ENCODE_BED_id=ENCFF864AYJ;ENCODE_bigBed_id=ENCFF542UDC;PMID=34755879;Motif_sequence=TTCTCAKCARRRMMAWT;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002784;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name Factorbook GM12878 (repl. 1, 2) Motif finding CBX5 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR372GIN] [TFBS]
CBX5 • GM12878 NGFTB5USJGK3WC • Factorbook34755879 Motif finding GM12878 TFBS Show metadata Download track Track metadata identifier NGFTB5USJGK3WC data_source Factorbook Download track Download number_of_intervals 117 bp_covered 2,340 output_type transcription factor binding sites significant genome_build hg38 cell_type GM12878 biosample_type Cell line biosample_term_id EFO:0002784 tissue_category Blood encode_experiment_id ENCSR372GIN biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CBX5 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 1,798 downloaded_date 07/10/2024 release_date 10/27/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF864AYJ_RGMRSMMCCYTTCTGCAGAA_filtered.bed.gz processed_file_md5 ae73ccf746c9cc76ab498dd23f541fa8 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF864AYJ_RGMRSMMCCYTTCTGCAGAA_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF864AYJ_RGMRSMMCCYTTCTGCAGAA_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF864AYJ_RGMRSMMCCYTTCTGCAGAA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF864AYJ_RGMRSMMCCYTTCTGCAGAA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 383a2980501b89879201cef36c48eadf data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens GM12878;Original_cell_type=GM12878;Lab=Richard Myers, HAIB;System=immune system;ENCODE_BED_id=ENCFF864AYJ;ENCODE_bigBed_id=ENCFF542UDC;PMID=34755879;Motif_sequence=RGMRSMMCCYTTCTGCAGAA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002784;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name Factorbook GM12878 (repl. 1, 2) Motif finding CBX5 transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR372GIN] [TFBS]
CBX5 • K562 NGFTBCKEARPOHU • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBCKEARPOHU data_source Factorbook Download track Download number_of_intervals 393 bp_covered 11,397 output_type transcription factor binding sites significant genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR272JAT biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CBX5 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 7,789 downloaded_date 07/10/2024 release_date 07/07/2014 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF066OJB_GGGGTGGAGCCCTCATGGAGAACCTCTGC_filtered.bed.gz processed_file_md5 5291979d6407dba9a59d5f597a2ec85c wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF066OJB_GGGGTGGAGCCCTCATGGAGAACCTCTGC_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF066OJB_GGGGTGGAGCCCTCATGGAGAACCTCTGC_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF066OJB_GGGGTGGAGCCCTCATGGAGAACCTCTGC.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF066OJB_GGGGTGGAGCCCTCATGGAGAACCTCTGC.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 b923b73639e043a76866f6221fb66e89 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Richard Myers, HAIB;System=immune system;ENCODE_BED_id=ENCFF066OJB;ENCODE_bigBed_id=ENCFF188CYP;PMID=34755879;Motif_sequence=GGGGTGGAGCCCTCATGGAGAACCTCTGC;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding CBX5 transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR272JAT] [Life stage: Adult] [TFBS]
CBX5 • K562 NGFTBF7LQ3L66T • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBF7LQ3L66T data_source Factorbook Download track Download number_of_intervals 78 bp_covered 1,326 output_type transcription factor binding sites significant genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR272JAT biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CBX5 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 1,216 downloaded_date 07/10/2024 release_date 07/07/2014 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF066OJB_TTTCTGCAGAAAGGGTG_filtered.bed.gz processed_file_md5 38cb1160c1bd126b4cce81f43bb38f4f wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF066OJB_TTTCTGCAGAAAGGGTG_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF066OJB_TTTCTGCAGAAAGGGTG_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF066OJB_TTTCTGCAGAAAGGGTG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF066OJB_TTTCTGCAGAAAGGGTG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 6a7e0ff16a9bca41eb59fcb58abce9c6 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Richard Myers, HAIB;System=immune system;ENCODE_BED_id=ENCFF066OJB;ENCODE_bigBed_id=ENCFF188CYP;PMID=34755879;Motif_sequence=TTTCTGCAGAAAGGGTG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding CBX5 transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR272JAT] [Life stage: Adult] [TFBS]
CBX5 • K562 NGFTBFYLZ6KMQG • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBFYLZ6KMQG data_source Factorbook Download track Download number_of_intervals 1,640 bp_covered 27,880 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR272JAT biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CBX5 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 29,433 downloaded_date 07/10/2024 release_date 07/07/2014 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF066OJB_TTTCTGCAGAAAGGGTG_sorted.bed.gz processed_file_md5 21469a5e05bd317cd49658bfd50a240d wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF066OJB_TTTCTGCAGAAAGGGTG_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF066OJB_TTTCTGCAGAAAGGGTG_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF066OJB_TTTCTGCAGAAAGGGTG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF066OJB_TTTCTGCAGAAAGGGTG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 6a7e0ff16a9bca41eb59fcb58abce9c6 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Richard Myers, HAIB;System=immune system;ENCODE_BED_id=ENCFF066OJB;ENCODE_bigBed_id=ENCFF188CYP;PMID=34755879;Motif_sequence=TTTCTGCAGAAAGGGTG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding CBX5 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR272JAT] [Life stage: Adult] [TFBS]
CBX5 • K562 NGFTBGCVL76BJS • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBGCVL76BJS data_source Factorbook Download track Download number_of_intervals 1,880 bp_covered 39,480 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR272JAT biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CBX5 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 36,594 downloaded_date 07/10/2024 release_date 07/07/2014 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF066OJB_CAGCAGACTTCTSMHYRGAMA_sorted.bed.gz processed_file_md5 df13e6fea0b9135bcdf538bd937726ea wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF066OJB_CAGCAGACTTCTSMHYRGAMA_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF066OJB_CAGCAGACTTCTSMHYRGAMA_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF066OJB_CAGCAGACTTCTSMHYRGAMA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF066OJB_CAGCAGACTTCTSMHYRGAMA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 5eb046069d0152d9a64383e848d7e7be data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Richard Myers, HAIB;System=immune system;ENCODE_BED_id=ENCFF066OJB;ENCODE_bigBed_id=ENCFF188CYP;PMID=34755879;Motif_sequence=CAGCAGACTTCTSMHYRGAMA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding CBX5 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR272JAT] [Life stage: Adult] [TFBS]
CBX5 • GM12878 NGFTBICGTOGLAV • Factorbook34755879 Motif finding GM12878 TFBS Show metadata Download track Track metadata identifier NGFTBICGTOGLAV data_source Factorbook Download track Download number_of_intervals 6,442 bp_covered 135,282 output_type transcription factor binding sites all genome_build hg38 cell_type GM12878 biosample_type Cell line biosample_term_id EFO:0002784 tissue_category Blood encode_experiment_id ENCSR372GIN biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CBX5 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 124,927 downloaded_date 07/10/2024 release_date 10/27/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF864AYJ_GGARGCCAGAAGACARTGGRA_sorted.bed.gz processed_file_md5 91f0e1a2452bbebd764c72784508e5aa wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF864AYJ_GGARGCCAGAAGACARTGGRA_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF864AYJ_GGARGCCAGAAGACARTGGRA_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF864AYJ_GGARGCCAGAAGACARTGGRA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF864AYJ_GGARGCCAGAAGACARTGGRA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 cce63a816bd917f1e3dd8b74015fd358 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens GM12878;Original_cell_type=GM12878;Lab=Richard Myers, HAIB;System=immune system;ENCODE_BED_id=ENCFF864AYJ;ENCODE_bigBed_id=ENCFF542UDC;PMID=34755879;Motif_sequence=GGARGCCAGAAGACARTGGRA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002784;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name Factorbook GM12878 (repl. 1, 2) Motif finding CBX5 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR372GIN] [TFBS]
CBX5 • K562 NGFTBKLHAZSLVW • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBKLHAZSLVW data_source Factorbook Download track Download number_of_intervals 257 bp_covered 5,397 output_type transcription factor binding sites significant genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR272JAT biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CBX5 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 4,763 downloaded_date 07/10/2024 release_date 07/07/2014 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF066OJB_ATGGARGCCAGAAGRCARTGG_filtered.bed.gz processed_file_md5 9dabeaedcc0c9ecab9c8d70d49aef268 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF066OJB_ATGGARGCCAGAAGRCARTGG_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF066OJB_ATGGARGCCAGAAGRCARTGG_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF066OJB_ATGGARGCCAGAAGRCARTGG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF066OJB_ATGGARGCCAGAAGRCARTGG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 90f62b1083ec95087da0fed0c66f56e5 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Richard Myers, HAIB;System=immune system;ENCODE_BED_id=ENCFF066OJB;ENCODE_bigBed_id=ENCFF188CYP;PMID=34755879;Motif_sequence=ATGGARGCCAGAAGRCARTGG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding CBX5 transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR272JAT] [Life stage: Adult] [TFBS]
CBX5 • K562 NGFTBMF36IOMTZ • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBMF36IOMTZ data_source Factorbook Download track Download number_of_intervals 381 bp_covered 8,001 output_type transcription factor binding sites significant genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR272JAT biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CBX5 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 5,756 downloaded_date 07/10/2024 release_date 07/07/2014 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF066OJB_CAGCAGACTTCTSMHYRGAMA_filtered.bed.gz processed_file_md5 6c1e2175779b13883c0b7896048a8a1a wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF066OJB_CAGCAGACTTCTSMHYRGAMA_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF066OJB_CAGCAGACTTCTSMHYRGAMA_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF066OJB_CAGCAGACTTCTSMHYRGAMA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF066OJB_CAGCAGACTTCTSMHYRGAMA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 5eb046069d0152d9a64383e848d7e7be data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Richard Myers, HAIB;System=immune system;ENCODE_BED_id=ENCFF066OJB;ENCODE_bigBed_id=ENCFF188CYP;PMID=34755879;Motif_sequence=CAGCAGACTTCTSMHYRGAMA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding CBX5 transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR272JAT] [Life stage: Adult] [TFBS]
CBX5 • K562 NGFTBOWJFOCPBS • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBOWJFOCPBS data_source Factorbook Download track Download number_of_intervals 1,583 bp_covered 45,907 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR272JAT biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CBX5 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 35,325 downloaded_date 07/10/2024 release_date 07/07/2014 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF066OJB_GGGGTGGAGCCCTCATGGAGAACCTCTGC_sorted.bed.gz processed_file_md5 6adb36f0d5a25464e31ea4d15a404125 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF066OJB_GGGGTGGAGCCCTCATGGAGAACCTCTGC_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF066OJB_GGGGTGGAGCCCTCATGGAGAACCTCTGC_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF066OJB_GGGGTGGAGCCCTCATGGAGAACCTCTGC.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF066OJB_GGGGTGGAGCCCTCATGGAGAACCTCTGC.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 b923b73639e043a76866f6221fb66e89 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Richard Myers, HAIB;System=immune system;ENCODE_BED_id=ENCFF066OJB;ENCODE_bigBed_id=ENCFF188CYP;PMID=34755879;Motif_sequence=GGGGTGGAGCCCTCATGGAGAACCTCTGC;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding CBX5 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR272JAT] [Life stage: Adult] [TFBS]
CBX5 • K562 NGFTBS722OJG52 • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBS722OJG52 data_source Factorbook Download track Download number_of_intervals 1,132 bp_covered 19,244 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR272JAT biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CBX5 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 21,054 downloaded_date 07/10/2024 release_date 07/07/2014 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF066OJB_TTTCTCAGCAAGGCAAW_sorted.bed.gz processed_file_md5 c716c173276fa914840c06cc7d5f0464 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF066OJB_TTTCTCAGCAAGGCAAW_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF066OJB_TTTCTCAGCAAGGCAAW_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF066OJB_TTTCTCAGCAAGGCAAW.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF066OJB_TTTCTCAGCAAGGCAAW.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 4f9289d54e371560af006873cca42659 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Richard Myers, HAIB;System=immune system;ENCODE_BED_id=ENCFF066OJB;ENCODE_bigBed_id=ENCFF188CYP;PMID=34755879;Motif_sequence=TTTCTCAGCAAGGCAAW;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding CBX5 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR272JAT] [Life stage: Adult] [TFBS]
CBX5 • GM12878 NGFTBSFDJ6CUZC • Factorbook34755879 Motif finding GM12878 TFBS Show metadata Download track Track metadata identifier NGFTBSFDJ6CUZC data_source Factorbook Download track Download number_of_intervals 2,856 bp_covered 57,120 output_type transcription factor binding sites all genome_build hg38 cell_type GM12878 biosample_type Cell line biosample_term_id EFO:0002784 tissue_category Blood encode_experiment_id ENCSR372GIN biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CBX5 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 53,081 downloaded_date 07/10/2024 release_date 10/27/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF864AYJ_RGMRSMMCCYTTCTGCAGAA_sorted.bed.gz processed_file_md5 6d7e1a9ff2f717609c735ee486c4fe88 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF864AYJ_RGMRSMMCCYTTCTGCAGAA_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF864AYJ_RGMRSMMCCYTTCTGCAGAA_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF864AYJ_RGMRSMMCCYTTCTGCAGAA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF864AYJ_RGMRSMMCCYTTCTGCAGAA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 383a2980501b89879201cef36c48eadf data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens GM12878;Original_cell_type=GM12878;Lab=Richard Myers, HAIB;System=immune system;ENCODE_BED_id=ENCFF864AYJ;ENCODE_bigBed_id=ENCFF542UDC;PMID=34755879;Motif_sequence=RGMRSMMCCYTTCTGCAGAA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002784;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name Factorbook GM12878 (repl. 1, 2) Motif finding CBX5 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR372GIN] [TFBS]
CBX5 • K562 NGFTBX2LTJ6433 • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBX2LTJ6433 data_source Factorbook Download track Download number_of_intervals 1,914 bp_covered 40,194 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR272JAT biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CBX5 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 39,648 downloaded_date 07/10/2024 release_date 07/07/2014 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF066OJB_ATGGARGCCAGAAGRCARTGG_sorted.bed.gz processed_file_md5 8c2241f46ee0d78b1375259872ab55be wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF066OJB_ATGGARGCCAGAAGRCARTGG_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF066OJB_ATGGARGCCAGAAGRCARTGG_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF066OJB_ATGGARGCCAGAAGRCARTGG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF066OJB_ATGGARGCCAGAAGRCARTGG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 90f62b1083ec95087da0fed0c66f56e5 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Richard Myers, HAIB;System=immune system;ENCODE_BED_id=ENCFF066OJB;ENCODE_bigBed_id=ENCFF188CYP;PMID=34755879;Motif_sequence=ATGGARGCCAGAAGRCARTGG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding CBX5 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR272JAT] [Life stage: Adult] [TFBS]