H3K27me3 • Spleen NGENCZWAN6O3AS • ENCODE22955616 | 41168159 | 31713622 Histone ChIP-seq Spleen Histone Show metadata Download track Track metadata identifier NGENCZWAN6O3AS data_source ENCODE Download track Download number_of_intervals 15,316 bp_covered 21,622,657 output_type pseudoreplicated peaks genome_build hg38 cell_type Spleen biosample_type Tissue biosample_term_id UBERON:0002106 tissue_category Immune Organ encode_experiment_id ENCSR826MTK biological_replicate 1, 2 technical_replicate 1_1, 1_2, 2_1, 2_2 antibody H3K27me3 assay Histone ChIP-seq file_format bed narrowPeak file_size 330,335 downloaded_date 06/12/2022 release_date 09/21/2020 date_added_to_filer 08/22/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF169RZJ.bed.gz processed_file_md5 7b4c20b0221c7bce26216e7a23ae4c1d wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF169RZJ.bed.gz -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF169RZJ.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF169RZJ/@@download/ENCFF169RZJ.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF169RZJ.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 8ba90b52cb02cb3960cf8bfb0271846b data_category Histone ChIP-seq peaks Genomic feature type Histone ChIP-seq H3K27me3 pseudoreplicated peaks track_description version=2024;Biosample_summary=Homo sapiens spleen tissue female adult (51 years);Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_2_2,ENTEx;Life_stage_age=adult 51 years;Reference=NR;External_resources=GEO:GSE167695;Project=ENCODE;Award=UM1HG009390;Experiment_date_released=2019-09-11,2019-02-11;Submitted_track_name=pooled-pr1_vs_pooled-pr2.overlap.bfilt.narrowPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=spleen;ENCODE_cell_slims=NR;ENCODE_system_slims=digestive system,immune system;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ENCODE.html;original_biosample_term_id=UBERON:0002106;is_hg38_lifted=no;narrowPeak_filter=qValueLog10 system_category Lymphatic life_stage Adult track_name ENCODE Spleen (repl. 1, 2) Histone ChIP-seq H3K27me3 pseudoreplicated peaks (narrowPeak) [Experiment: ENCSR826MTK] [Life stage: Adult] [Histone ChIP-seq peaks]
H3K27me3 • Tibial nerve NGENCZWJIBQYAJ • ENCODE22955616 | 41168159 | 31713622 Histone ChIP-seq Tibial nerve Histone Show metadata Download track Track metadata identifier NGENCZWJIBQYAJ data_source ENCODE Download track Download number_of_intervals 35,362 bp_covered 43,500,589 output_type pseudoreplicated peaks genome_build hg38 cell_type Tibial nerve biosample_type Tissue biosample_term_id UBERON:0001323 tissue_category Nervous encode_experiment_id ENCSR611YUJ biological_replicate 1 technical_replicate 1_1 antibody H3K27me3 assay Histone ChIP-seq file_format bed narrowPeak file_size 721,466 downloaded_date 06/12/2022 release_date 11/02/2020 date_added_to_filer 08/22/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF029PSV.bed.gz processed_file_md5 6171bfb0287d5676e94ef9ad61ce5a9f wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF029PSV.bed.gz -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF029PSV.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF029PSV/@@download/ENCFF029PSV.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF029PSV.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 019da9493f4ca2725d052d0006bde589 data_category Histone ChIP-seq peaks Genomic feature type Histone ChIP-seq H3K27me3 pseudoreplicated peaks track_description version=2024;Biosample_summary=Homo sapiens tibial nerve tissue female adult (53 years);Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_2_2,ENCYCLOPEDIAv2,ENTEx;Life_stage_age=adult 53 years;Reference=PMID:32728046;External_resources=GEO:GSE101121;Project=ENCODE;Award=U54HG006991;Experiment_date_released=2017-01-27;Submitted_track_name=rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=tibial nerve;ENCODE_cell_slims=NR;ENCODE_system_slims=peripheral nervous system;ENCODE_biosample_term_synonyms=medial popliteal nerve;Analysis_title=ENCODE4 v1.6.0 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ENCODE.html;original_biosample_term_id=UBERON:0001323;is_hg38_lifted=no;narrowPeak_filter=qValueLog10 system_category Nervous life_stage Adult track_name ENCODE Tibial nerve (repl. 1) Histone ChIP-seq H3K27me3 pseudoreplicated peaks (narrowPeak) [Experiment: ENCSR611YUJ] [Life stage: Adult] [Histone ChIP-seq peaks]
H3K27me3 • MCF-7 NGENCZX6PB7K3I • ENCODE22955616 | 41168159 | 31713622 Histone ChIP-seq MCF-7 Histone Show metadata Download track Track metadata identifier NGENCZX6PB7K3I data_source ENCODE Download track Download number_of_intervals 21,728 bp_covered 7,819,064 output_type pseudoreplicated peaks genome_build hg38 cell_type MCF-7 biosample_type Cell line biosample_term_id EFO:0001203 tissue_category Breast encode_experiment_id ENCSR000EWP biological_replicate 2 technical_replicate 2_1 antibody H3K27me3 assay Histone ChIP-seq file_format bed narrowPeak file_size 456,343 downloaded_date 06/12/2022 release_date 11/01/2020 date_added_to_filer 08/22/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF459IRR.bed.gz processed_file_md5 bfb4c55e74cb9fd0db2131e9c3f68e72 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF459IRR.bed.gz -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF459IRR.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF459IRR/@@download/ENCFF459IRR.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF459IRR.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 57aa03f0e1aaaecf06c60b3643599772 data_category Histone ChIP-seq peaks Genomic feature type Histone ChIP-seq H3K27me3 pseudoreplicated peaks track_description version=2024;Biosample_summary=Homo sapiens MCF-7;Lab=Peggy Farnham, USC;ENCODE_internal_tags=ENCYCLOPEDIAv1,RegulomeDB_2_2,ENCYCLOPEDIAv2;Life_stage_age=adult 69 years;Reference=PMID:32728046;External_resources=GEO:GSM970218,UCSC-ENCODE-hg19:wgEncodeEH002922;Project=ENCODE;Award=U54HG004558;Experiment_date_released=2012-06-15,2011-10-29;Submitted_track_name=rep2-pr1_vs_rep2-pr2.overlap.bfilt.narrowPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=MCF-7;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_system_slims=exocrine system,integumental system;ENCODE_biosample_term_synonyms=MCF7,MCF-7 cell,MCF7 cell;Analysis_title=ENCODE4 v1.6.0 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001203;is_hg38_lifted=no;narrowPeak_filter=qValueLog10 system_category Reproductive life_stage Adult track_name ENCODE MCF-7 (repl. 2) Histone ChIP-seq H3K27me3 pseudoreplicated peaks (narrowPeak) [Experiment: ENCSR000EWP] [Life stage: Adult] [Histone ChIP-seq peaks]
H3K27me3 • Small intestine NGENCZZNVTSI4X • ENCODE22955616 | 41168159 | 31713622 Histone ChIP-seq Small intestine Histone Show metadata Download track Track metadata identifier NGENCZZNVTSI4X data_source ENCODE Download track Download number_of_intervals 39,076 bp_covered 13,960,372 output_type pseudoreplicated peaks genome_build hg38 cell_type Small intestine biosample_type Tissue biosample_term_id UBERON:0002108 tissue_category Digestive encode_experiment_id ENCSR340OPI biological_replicate 1 technical_replicate 1_1 antibody H3K27me3 assay Histone ChIP-seq file_format bed narrowPeak file_size 842,544 downloaded_date 06/12/2022 release_date 11/13/2020 date_added_to_filer 08/22/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF376BLS.bed.gz processed_file_md5 6a43baa9f776cd8f0330ad613ed784d3 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF376BLS.bed.gz -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF376BLS.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF376BLS/@@download/ENCFF376BLS.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF376BLS.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 e8d0bd5666b8552fd7441c3430284539 data_category Histone ChIP-seq peaks Genomic feature type Histone ChIP-seq H3K27me3 pseudoreplicated peaks track_description version=2024;Biosample_summary=Homo sapiens small intestine tissue male child (3 years);Lab=Bing Ren, UCSD;ENCODE_internal_tags=ENCYCLOPEDIAv1,RegulomeDB_2_2,ENCYCLOPEDIAv2;Life_stage_age=child 3 years;Reference=PMID:32728046;External_resources=GEO:GSM915332;Project=Roadmap;Award=U01ES017166;Experiment_date_released=2013-07-31;Submitted_track_name=rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=small intestine;ENCODE_cell_slims=NR;ENCODE_system_slims=digestive system;ENCODE_biosample_term_synonyms=small intestine,small bowel;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ENCODE.html;original_biosample_term_id=UBERON:0002108;is_hg38_lifted=no;narrowPeak_filter=qValueLog10 system_category Digestive life_stage Child track_name ENCODE Small intestine (repl. 1) Histone ChIP-seq H3K27me3 pseudoreplicated peaks (narrowPeak) [Experiment: ENCSR340OPI] [Life stage: Child] [Histone ChIP-seq peaks]
H3K27me3 • CD8+ naive T cell NGRMP22BRD5R4A • ROADMAP25693563 ChIP-seq CD8+ naive T cell Histone Show metadata Download track Track metadata identifier NGRMP22BRD5R4A data_source ROADMAP Download track Download number_of_intervals 29,512 bp_covered 10,484,859 output_type peaks genome_build hg38 cell_type CD8+ naive T cell biosample_type Primary cell biosample_term_id CL:0000900 tissue_category Blood encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27me3 assay ChIP-seq file_format bed narrowPeak-lifted file_size 776,939 downloaded_date 08/15/2018 release_date 11/30/2014 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/BI.CD8_Naive_Primary_Cells.H3K27me3.Donor_101_8_pooled_leukopaks_Jan_20_2011.narrowPeak.lifted.bed.gz processed_file_md5 ea0cc35d55da3e7a5940f13e3b0216c3 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/BI.CD8_Naive_Primary_Cells.H3K27me3.Donor_101_8_pooled_leukopaks_Jan_20_2011.narrowPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/BI.CD8_Naive_Primary_Cells.H3K27me3.Donor_101_8_pooled_leukopaks_Jan_20_2011.narrowPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/narrowPeak/BI.CD8_Naive_Primary_Cells.H3K27me3.Donor_101_8_pooled_leukopaks_Jan_20_2011.narrowPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/narrowpeak/BI.CD8_Naive_Primary_Cells.H3K27me3.Donor_101_8_pooled_leukopaks_Jan_20_2011.narrowPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/narrowpeak/ raw_file_md5 7c4adb10dfa27987addcaf7bf836f7bf data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27me3 peaks track_description version=2015;Original_cell_type=CD8 Naive Primary Cells;Donor=101_8_pooled_leukopaks_Jan_20_2011;schema=BED3+10;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Cardiovascular life_stage Unknown track_name ROADMAP CD8+ naive T cell ChIP-seq H3K27me3-histone-mark peaks (narrowPeak-lifted) [Histone ChIP-seq peaks]
H3K27me3 • Left ventricle NGRMP23AEZDHR7 • ROADMAP25693563 ChIP-seq Left ventricle Histone Show metadata Download track Track metadata identifier NGRMP23AEZDHR7 data_source ROADMAP Download track Download number_of_intervals 90,659 bp_covered 206,756,844 output_type peaks genome_build hg38 cell_type Left ventricle biosample_type Primary tissue biosample_term_id UBERON:0002084 tissue_category Heart encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27me3 assay ChIP-seq file_format bed gappedPeak-lifted file_size 4,470,153 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/28/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.Left_Ventricle.H3K27me3.STL001.gappedPeak.lifted.bed.gz processed_file_md5 0deb1a33ddd1075b0bf447b3dcc44c8c wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.Left_Ventricle.H3K27me3.STL001.gappedPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.Left_Ventricle.H3K27me3.STL001.gappedPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/gappedPeak/UCSD.Left_Ventricle.H3K27me3.STL001.gappedPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/gappedpeak/UCSD.Left_Ventricle.H3K27me3.STL001.gappedPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/gappedpeak/ raw_file_md5 46f635dcef5db9119ffe120d68f31106 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27me3 peaks track_description version=2015;Original_cell_type=Left Ventricle;Donor=STL001;schema=BED3+15;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Cardiovascular life_stage Unknown track_name ROADMAP Left ventricle ChIP-seq H3K27me3-histone-mark peaks (gappedPeak-lifted) [Histone ChIP-seq peaks]
H3K27me3 • Muscle NGRMP23IBKNQLR • ROADMAP25693563 ChIP-seq Muscle Histone Show metadata Download track Track metadata identifier NGRMP23IBKNQLR data_source ROADMAP Download track Download number_of_intervals 96,725 bp_covered 391,570,732 output_type peaks genome_build hg38 cell_type Muscle biosample_type Primary tissue biosample_term_id NCIT:C13056 tissue_category Skeletal Muscle encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27me3 assay ChIP-seq file_format bed gappedPeak-lifted file_size 5,579,242 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/28/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UW.Fetal_Muscle_Leg.H3K27me3.H-24644.Histone.DS22559.gappedPeak.lifted.bed.gz processed_file_md5 1c2910ce4a18a6ed8454d7eb613ab0bd wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UW.Fetal_Muscle_Leg.H3K27me3.H-24644.Histone.DS22559.gappedPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UW.Fetal_Muscle_Leg.H3K27me3.H-24644.Histone.DS22559.gappedPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/gappedPeak/UW.Fetal_Muscle_Leg.H3K27me3.H-24644.Histone.DS22559.gappedPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/gappedpeak/UW.Fetal_Muscle_Leg.H3K27me3.H-24644.Histone.DS22559.gappedPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/gappedpeak/ raw_file_md5 ba76ce51b36b6a51257e97258c906b4f data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27me3 peaks track_description version=2015;Original_cell_type=Fetal Muscle Leg;Donor=H-24644.Histone.DS22559;schema=BED3+15;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Muscular life_stage Fetal track_name ROADMAP Muscle ChIP-seq H3K27me3-histone-mark peaks (gappedPeak-lifted) [Life stage: Fetal] [Histone ChIP-seq peaks]
H3K27me3 • Mid frontal lobe NGRMP24573RAHA • ROADMAP25693563 ChIP-seq Mid frontal lobe Histone Show metadata Download track Track metadata identifier NGRMP24573RAHA data_source ROADMAP Download track Download number_of_intervals 82,847 bp_covered 33,482,154 output_type peaks genome_build hg38 cell_type Mid frontal lobe biosample_type Primary tissue biosample_term_id UBERON:0001870 tissue_category Brain encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27me3 assay ChIP-seq file_format bed narrowPeak-lifted file_size 2,405,177 downloaded_date 08/15/2018 release_date 11/30/2014 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/BI.Brain_Mid_Frontal_Lobe.H3K27me3.149.narrowPeak.lifted.bed.gz processed_file_md5 c043b388149b788d43faf26bb36cd99d wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/BI.Brain_Mid_Frontal_Lobe.H3K27me3.149.narrowPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/BI.Brain_Mid_Frontal_Lobe.H3K27me3.149.narrowPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/narrowPeak/BI.Brain_Mid_Frontal_Lobe.H3K27me3.149.narrowPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/narrowpeak/BI.Brain_Mid_Frontal_Lobe.H3K27me3.149.narrowPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/narrowpeak/ raw_file_md5 ced0317e37cdc33ff231372b412b8e51 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27me3 peaks track_description version=2015;Original_cell_type=Brain Mid Frontal Lobe;Donor=149;schema=BED3+10;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Nervous life_stage Unknown track_name ROADMAP Mid frontal lobe ChIP-seq H3K27me3-histone-mark peaks (narrowPeak-lifted) [Histone ChIP-seq peaks]
H3K27me3 • CD4+ CD25- Th cell NGRMP24GR743S7 • ROADMAP25693563 ChIP-seq CD4+ CD25- Th cell Histone Show metadata Download track Track metadata identifier NGRMP24GR743S7 data_source ROADMAP Download track Download number_of_intervals 190,082 bp_covered 77,542,853 output_type peaks genome_build hg38 cell_type CD4+ CD25- Th cell biosample_type Primary cell biosample_term_id CL:0000624 tissue_category Blood encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27me3 assay ChIP-seq file_format bed narrowPeak-lifted file_size 5,328,615 downloaded_date 08/15/2018 release_date 11/30/2014 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/BI.CD4+_CD25-_Th_Primary_Cells.H3K27me3.Donor_62.narrowPeak.lifted.bed.gz processed_file_md5 43a2bd1dd4dbbbd150ce1c8df12510ee wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/BI.CD4+_CD25-_Th_Primary_Cells.H3K27me3.Donor_62.narrowPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/BI.CD4+_CD25-_Th_Primary_Cells.H3K27me3.Donor_62.narrowPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/narrowPeak/BI.CD4+_CD25-_Th_Primary_Cells.H3K27me3.Donor_62.narrowPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/narrowpeak/BI.CD4+_CD25-_Th_Primary_Cells.H3K27me3.Donor_62.narrowPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/narrowpeak/ raw_file_md5 caa5b2cd4d06c3505b1ae9e9fb5fcbcf data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27me3 peaks track_description version=2015;Original_cell_type=CD4+ CD25- Th Primary Cells;Donor=62;schema=BED3+10;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Cardiovascular life_stage Unknown track_name ROADMAP CD4+ CD25- Th cell ChIP-seq H3K27me3-histone-mark peaks (narrowPeak-lifted) [Histone ChIP-seq peaks]
H3K27me3 • iPS-15b NGRMP24PJK5G7O • ROADMAP25693563 ChIP-seq iPS-15b Histone Show metadata Download track Track metadata identifier NGRMP24PJK5G7O data_source ROADMAP Download track Download number_of_intervals 349,501 bp_covered 493,265,053 output_type peaks genome_build hg38 cell_type iPS-15b biosample_type Primary culture biosample_term_id EFO:0007102 tissue_category iPSC encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27me3 assay ChIP-seq file_format bed broadPeak-lifted file_size 11,393,353 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/27/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/BI.iPS-15b.H3K27me3.Lib_MC_20100128_05--ChIP_MC_20100125_05_hiPS-15b_H3K27Me3.broadPeak.lifted.bed.gz processed_file_md5 df36f51bd5b0b6ec5220d5020d6765c0 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/BI.iPS-15b.H3K27me3.Lib_MC_20100128_05--ChIP_MC_20100125_05_hiPS-15b_H3K27Me3.broadPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/BI.iPS-15b.H3K27me3.Lib_MC_20100128_05--ChIP_MC_20100125_05_hiPS-15b_H3K27Me3.broadPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/broadPeak/BI.iPS-15b.H3K27me3.Lib_MC_20100128_05--ChIP_MC_20100125_05_hiPS-15b_H3K27Me3.broadPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/broadpeak/BI.iPS-15b.H3K27me3.Lib_MC_20100128_05--ChIP_MC_20100125_05_hiPS-15b_H3K27Me3.broadPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/broadpeak/ raw_file_md5 b4d6db21ba7ec7b9e1612ac85cb55257 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27me3 peaks track_description version=2015;Original_cell_type=iPS-15b;Donor=Lib_MC_20100128_05--ChIP_MC_20100125_05_hiPS-15b_H3K27Me3;schema=BED3+9;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=EFO:0007102;is_hg38_lifted=yes system_category Stem Cell life_stage Unknown track_name ROADMAP iPS-15b ChIP-seq H3K27me3-histone-mark peaks (broadPeak-lifted) [Histone ChIP-seq peaks]
H3K27me3 • Cardiac atrium NGRMP25R35BYXK • ROADMAP25693563 ChIP-seq Cardiac atrium Histone Show metadata Download track Track metadata identifier NGRMP25R35BYXK data_source ROADMAP Download track Download number_of_intervals 13,934 bp_covered 59,856,103 output_type peaks genome_build hg38 cell_type Cardiac atrium biosample_type Primary tissue biosample_term_id UBERON:0002081 tissue_category Heart encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27me3 assay ChIP-seq file_format bed gappedPeak-lifted file_size 674,901 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/28/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.Right_Atrium.H3K27me3.STL003.gappedPeak.lifted.bed.gz processed_file_md5 0dfcde26b99538de6509e122b3e915fb wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.Right_Atrium.H3K27me3.STL003.gappedPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.Right_Atrium.H3K27me3.STL003.gappedPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/gappedPeak/UCSD.Right_Atrium.H3K27me3.STL003.gappedPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/gappedpeak/UCSD.Right_Atrium.H3K27me3.STL003.gappedPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/gappedpeak/ raw_file_md5 d4555ab595d26b41ef2c9491082595db data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27me3 peaks track_description version=2015;Original_cell_type=Right Atrium;Donor=STL003;schema=BED3+15;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=UBERON:0002078;is_hg38_lifted=yes system_category Cardiovascular life_stage Unknown track_name ROADMAP Cardiac atrium ChIP-seq H3K27me3-histone-mark peaks (gappedPeak-lifted) [Histone ChIP-seq peaks]
H3K27me3 • H1-hESC NGRMP265W4MDWY • ROADMAP25693563 ChIP-seq H1-hESC Histone Show metadata Download track Track metadata identifier NGRMP265W4MDWY data_source ROADMAP Download track Download number_of_intervals 463,171 bp_covered 378,761,798 output_type peaks genome_build hg38 cell_type H1-hESC biosample_type Stem cell biosample_term_id EFO:0003042 tissue_category Embryo encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27me3 assay ChIP-seq file_format bed broadPeak-lifted file_size 14,942,335 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/27/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/BI.H1.H3K27me3.Solexa-12523.broadPeak.lifted.bed.gz processed_file_md5 8216b1cb1ea59cce5cd248af0574c013 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/BI.H1.H3K27me3.Solexa-12523.broadPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/BI.H1.H3K27me3.Solexa-12523.broadPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/broadPeak/BI.H1.H3K27me3.Solexa-12523.broadPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/broadpeak/BI.H1.H3K27me3.Solexa-12523.broadPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/broadpeak/ raw_file_md5 d7dc4928fd6714c27945504c0ad40b40 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27me3 peaks track_description version=2015;Original_cell_type=H1;Donor=Solexa-12523;schema=BED3+9;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=EFO:0003042;is_hg38_lifted=yes system_category Embryo life_stage Embryonic track_name ROADMAP H1-hESC ChIP-seq H3K27me3-histone-mark peaks (broadPeak-lifted) [Life stage: Embryonic] [Histone ChIP-seq peaks]
H3K27me3 • CD4+ CD25- CD45RA+ naive T cell NGRMP2ARRTH6GI • ROADMAP25693563 ChIP-seq CD4+ CD25- CD45RA+ naive T cell Histone Show metadata Download track Track metadata identifier NGRMP2ARRTH6GI data_source ROADMAP Download track Download number_of_intervals 505,544 bp_covered 953,469,141 output_type peaks genome_build hg38 cell_type CD4+ CD25- CD45RA+ naive T cell biosample_type Primary cell biosample_term_id CL:0000895 tissue_category Blood encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27me3 assay ChIP-seq file_format bed broadPeak-lifted file_size 16,356,772 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/27/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/BI.CD4+_CD25-_CD45RA+_Naive_Primary_Cells.H3K27me3.Donor_332.broadPeak.lifted.bed.gz processed_file_md5 9d1c618ce56e01b5e8eac7aec27d9ef2 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/BI.CD4+_CD25-_CD45RA+_Naive_Primary_Cells.H3K27me3.Donor_332.broadPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/BI.CD4+_CD25-_CD45RA+_Naive_Primary_Cells.H3K27me3.Donor_332.broadPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/broadPeak/BI.CD4+_CD25-_CD45RA+_Naive_Primary_Cells.H3K27me3.Donor_332.broadPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/broadpeak/BI.CD4+_CD25-_CD45RA+_Naive_Primary_Cells.H3K27me3.Donor_332.broadPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/broadpeak/ raw_file_md5 ddfc41d8830e094c367aa4a250ddc7ce data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27me3 peaks track_description version=2015;Original_cell_type=CD4+ CD25- CD45RA+ Naive Primary Cells;Donor=332;schema=BED3+9;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Cardiovascular life_stage Unknown track_name ROADMAP CD4+ CD25- CD45RA+ naive T cell ChIP-seq H3K27me3-histone-mark peaks (broadPeak-lifted) [Histone ChIP-seq peaks]
H3K27me3 • Chondrocytes NGRMP2EBWOHUBY • ROADMAP25693563 ChIP-seq Chondrocytes Histone Show metadata Download track Track metadata identifier NGRMP2EBWOHUBY data_source ROADMAP Download track Download number_of_intervals 358,700 bp_covered 151,178,134 output_type peaks genome_build hg38 cell_type Chondrocytes biosample_type In vitro differentiated cells biosample_term_id CL:0000138 tissue_category Bone encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27me3 assay ChIP-seq file_format bed narrowPeak-lifted file_size 10,451,479 downloaded_date 08/15/2018 release_date 11/30/2014 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/BI.Chondrocytes_from_Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K27me3.60.narrowPeak.lifted.bed.gz processed_file_md5 318b13ce262086e1de2e4dfdb34cea5c wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/BI.Chondrocytes_from_Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K27me3.60.narrowPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/BI.Chondrocytes_from_Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K27me3.60.narrowPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/narrowPeak/BI.Chondrocytes_from_Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K27me3.60.narrowPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/narrowpeak/BI.Chondrocytes_from_Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K27me3.60.narrowPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/narrowpeak/ raw_file_md5 bdd296284e086180d744ab78f72d5b2e data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27me3 peaks track_description version=2015;Original_cell_type=Chondrocytes from Bone Marrow Derived Mesenchymal Stem Cell Cultured Cells;Donor=60;schema=BED3+10;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Skeletal life_stage Unknown track_name ROADMAP Chondrocytes ChIP-seq H3K27me3-histone-mark peaks (narrowPeak-lifted) [Histone ChIP-seq peaks]
H3K27me3 • Pancreatic islets NGRMP2EUKS6W33 • ROADMAP25693563 ChIP-seq Pancreatic islets Histone Show metadata Download track Track metadata identifier NGRMP2EUKS6W33 data_source ROADMAP Download track Download number_of_intervals 97,403 bp_covered 476,843,585 output_type peaks genome_build hg38 cell_type Pancreatic islets biosample_type Primary tissue biosample_term_id UBERON:0000006 tissue_category Pancreas encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27me3 assay ChIP-seq file_format bed gappedPeak-lifted file_size 5,459,868 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/28/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSF-UBC.Pancreatic_Islets.H3K27me3.ZGI_213.gappedPeak.lifted.bed.gz processed_file_md5 67ed85fb56e7093289589e3ec5ac2d2c wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSF-UBC.Pancreatic_Islets.H3K27me3.ZGI_213.gappedPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSF-UBC.Pancreatic_Islets.H3K27me3.ZGI_213.gappedPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/gappedPeak/UCSF-UBC.Pancreatic_Islets.H3K27me3.ZGI_213.gappedPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/gappedpeak/UCSF-UBC.Pancreatic_Islets.H3K27me3.ZGI_213.gappedPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/gappedpeak/ raw_file_md5 fb57ad52115e8bb28bdda562d877c1b3 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27me3 peaks track_description version=2015;Original_cell_type=Pancreatic Islets;Donor=ZGI_213;schema=BED3+15;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Endocrine life_stage Unknown track_name ROADMAP Pancreatic islets ChIP-seq H3K27me3-histone-mark peaks (gappedPeak-lifted) [Histone ChIP-seq peaks]
H3K27me3 • Mobilized CD34+ NGRMP2GEGTVPMC • ROADMAP25693563 ChIP-seq Mobilized CD34+ Histone Show metadata Download track Track metadata identifier NGRMP2GEGTVPMC data_source ROADMAP Download track Download number_of_intervals 95,101 bp_covered 224,663,618 output_type peaks genome_build hg38 cell_type Mobilized CD34+ biosample_type Primary cell biosample_term_id CL:0000037 tissue_category Blood encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27me3 assay ChIP-seq file_format bed gappedPeak-lifted file_size 4,798,109 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/28/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.Mobilized_CD34_Primary_Cells.H3K27me3.UW_RO_01536.gappedPeak.lifted.bed.gz processed_file_md5 b06445982a13f91ffac233dff871da0d wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.Mobilized_CD34_Primary_Cells.H3K27me3.UW_RO_01536.gappedPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.Mobilized_CD34_Primary_Cells.H3K27me3.UW_RO_01536.gappedPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/gappedPeak/BI.Mobilized_CD34_Primary_Cells.H3K27me3.UW_RO_01536.gappedPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/gappedpeak/BI.Mobilized_CD34_Primary_Cells.H3K27me3.UW_RO_01536.gappedPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/gappedpeak/ raw_file_md5 7dc3beef26c85742b38430148dd793d9 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27me3 peaks track_description version=2015;Original_cell_type=Mobilized CD34 Primary Cells;Donor=UW_RO_01536;schema=BED3+15;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Cardiovascular life_stage Unknown track_name ROADMAP Mobilized CD34+ ChIP-seq H3K27me3-histone-mark peaks (gappedPeak-lifted) [Histone ChIP-seq peaks]
H3K27me3 • Mucosa NGRMP2GYW4N7KZ • ROADMAP25693563 ChIP-seq Mucosa Histone Show metadata Download track Track metadata identifier NGRMP2GYW4N7KZ data_source ROADMAP Download track Download number_of_intervals 131,785 bp_covered 43,671,504 output_type peaks genome_build hg38 cell_type Mucosa biosample_type Primary tissue biosample_term_id UBERON:0000344 tissue_category Digestive encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27me3 assay ChIP-seq file_format bed narrowPeak-lifted file_size 3,712,375 downloaded_date 08/15/2018 release_date 11/30/2014 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/BI.Rectal_Mucosa.H3K27me3.31.narrowPeak.lifted.bed.gz processed_file_md5 3a66a80409628405122d36611b0ec6e5 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/BI.Rectal_Mucosa.H3K27me3.31.narrowPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/BI.Rectal_Mucosa.H3K27me3.31.narrowPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/narrowPeak/BI.Rectal_Mucosa.H3K27me3.31.narrowPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/narrowpeak/BI.Rectal_Mucosa.H3K27me3.31.narrowPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/narrowpeak/ raw_file_md5 99ad8690c94316ac40dfe53db2cbc067 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27me3 peaks track_description version=2015;Original_cell_type=Mucosa of rectum;Donor=31;schema=BED3+10;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Digestive life_stage Unknown track_name ROADMAP Mucosa ChIP-seq H3K27me3-histone-mark peaks (narrowPeak-lifted) [Histone ChIP-seq peaks]
H3K27me3 • Adipose NGRMP2H4SCR3U6 • ROADMAP25693563 ChIP-seq Adipose Histone Show metadata Download track Track metadata identifier NGRMP2H4SCR3U6 data_source ROADMAP Download track Download number_of_intervals 311,127 bp_covered 469,962,981 output_type peaks genome_build hg38 cell_type Adipose biosample_type Primary tissue biosample_term_id NCIT:C12472 tissue_category Adipose encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27me3 assay ChIP-seq file_format bed broadPeak-lifted file_size 10,288,827 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/27/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/BI.Adipose_Nuclei.H3K27me3.94.broadPeak.lifted.bed.gz processed_file_md5 e6d68ba1c878d1b0a321255f3a55f7f9 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/BI.Adipose_Nuclei.H3K27me3.94.broadPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/BI.Adipose_Nuclei.H3K27me3.94.broadPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/broadPeak/BI.Adipose_Nuclei.H3K27me3.94.broadPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/broadpeak/BI.Adipose_Nuclei.H3K27me3.94.broadPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/broadpeak/ raw_file_md5 c5dc7b62b7ba34d85ee09af707ad0a66 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27me3 peaks track_description version=2015;Original_cell_type=Adipose Nuclei;Donor=94;schema=BED3+9;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Integumentary life_stage Unknown track_name ROADMAP Adipose ChIP-seq H3K27me3-histone-mark peaks (broadPeak-lifted) [Histone ChIP-seq peaks]
H3K27me3 • Neuronal progenitor cell NGRMP2JRDQOOH4 • ROADMAP25693563 ChIP-seq Neuronal progenitor cell Histone Show metadata Download track Track metadata identifier NGRMP2JRDQOOH4 data_source ROADMAP Download track Download number_of_intervals 65,745 bp_covered 481,583,468 output_type peaks genome_build hg38 cell_type Neuronal progenitor cell biosample_type In vitro differentiated cells biosample_term_id CL:0000047 tissue_category Brain encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27me3 assay ChIP-seq file_format bed gappedPeak-lifted file_size 4,300,037 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/28/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.H9_Derived_Neuronal_Progenitor_Cultured_Cells.H3K27me3.113.gappedPeak.lifted.bed.gz processed_file_md5 6c2bbff1a6092c079a34714ee2feeb0a wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.H9_Derived_Neuronal_Progenitor_Cultured_Cells.H3K27me3.113.gappedPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.H9_Derived_Neuronal_Progenitor_Cultured_Cells.H3K27me3.113.gappedPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/gappedPeak/BI.H9_Derived_Neuronal_Progenitor_Cultured_Cells.H3K27me3.113.gappedPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/gappedpeak/BI.H9_Derived_Neuronal_Progenitor_Cultured_Cells.H3K27me3.113.gappedPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/gappedpeak/ raw_file_md5 90c4b2d533e111eea741baf0df2d1227 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27me3 peaks track_description version=2015;Original_cell_type=H9 Derived Neuronal Progenitor Cultured Cells;Donor=113;schema=BED3+15;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Nervous life_stage Embryonic track_name ROADMAP Neuronal progenitor cell ChIP-seq H3K27me3-histone-mark peaks (gappedPeak-lifted) [Life stage: Embryonic] [Histone ChIP-seq peaks]
H3K27me3 • Cardiac atrium NGRMP2L42BFOJQ • ROADMAP25693563 ChIP-seq Cardiac atrium Histone Show metadata Download track Track metadata identifier NGRMP2L42BFOJQ data_source ROADMAP Download track Download number_of_intervals 1,189 bp_covered 325,810 output_type peaks genome_build hg38 cell_type Cardiac atrium biosample_type Primary tissue biosample_term_id UBERON:0002081 tissue_category Heart encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27me3 assay ChIP-seq file_format bed narrowPeak-lifted file_size 33,291 downloaded_date 08/15/2018 release_date 11/30/2014 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/UCSD.Right_Atrium.H3K27me3.STL003.narrowPeak.lifted.bed.gz processed_file_md5 5e6d591576a81ef3d4141e1179ca5582 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/UCSD.Right_Atrium.H3K27me3.STL003.narrowPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/UCSD.Right_Atrium.H3K27me3.STL003.narrowPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/narrowPeak/UCSD.Right_Atrium.H3K27me3.STL003.narrowPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/narrowpeak/UCSD.Right_Atrium.H3K27me3.STL003.narrowPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/narrowpeak/ raw_file_md5 a0ef81703e4b4b3c2d1719d9151bb2ed data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27me3 peaks track_description version=2015;Original_cell_type=Right Atrium;Donor=STL003;schema=BED3+10;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=UBERON:0002078;is_hg38_lifted=yes system_category Cardiovascular life_stage Unknown track_name ROADMAP Cardiac atrium ChIP-seq H3K27me3-histone-mark peaks (narrowPeak-lifted) [Histone ChIP-seq peaks]