H3K27me3 • iPS-20b NGRMPLHE7VZ46Y • ROADMAP25693563 ChIP-seq iPS-20b Histone Show metadata Download track Track metadata identifier NGRMPLHE7VZ46Y data_source ROADMAP Download track Download number_of_intervals 404,800 bp_covered 534,830,452 output_type peaks genome_build hg38 cell_type iPS-20b biosample_type Primary culture biosample_term_id EFO:0007108 tissue_category iPSC encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27me3 assay ChIP-seq file_format bed broadPeak-lifted file_size 13,161,882 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/27/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/BI.iPS-20b.H3K27me3.Lib_MC_20100119_06--ChIP_MC_20100113_06_hiPS-20b_H3K27Me3.broadPeak.lifted.bed.gz processed_file_md5 60a02eaa31453e534703c1adc6587c37 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/BI.iPS-20b.H3K27me3.Lib_MC_20100119_06--ChIP_MC_20100113_06_hiPS-20b_H3K27Me3.broadPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/BI.iPS-20b.H3K27me3.Lib_MC_20100119_06--ChIP_MC_20100113_06_hiPS-20b_H3K27Me3.broadPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/broadPeak/BI.iPS-20b.H3K27me3.Lib_MC_20100119_06--ChIP_MC_20100113_06_hiPS-20b_H3K27Me3.broadPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/broadpeak/BI.iPS-20b.H3K27me3.Lib_MC_20100119_06--ChIP_MC_20100113_06_hiPS-20b_H3K27Me3.broadPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/broadpeak/ raw_file_md5 b5ea7f27134ad011ce883e22812d938b data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27me3 peaks track_description version=2015;Original_cell_type=iPS-20b;Donor=Lib_MC_20100119_06--ChIP_MC_20100113_06_hiPS-20b_H3K27Me3;schema=BED3+9;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=EFO:0007108;is_hg38_lifted=yes system_category Stem Cell life_stage Unknown track_name ROADMAP iPS-20b ChIP-seq H3K27me3-histone-mark peaks (broadPeak-lifted) [Histone ChIP-seq peaks]
H3K27me3 • Neurosphere cultured cell ganglionic eminence derived NGRMPLHOSYSNEJ • ROADMAP25693563 ChIP-seq Neurosphere cultured cell ganglionic eminence derived Histone Show metadata Download track Track metadata identifier NGRMPLHOSYSNEJ data_source ROADMAP Download track Download number_of_intervals 225,762 bp_covered 500,787,839 output_type peaks genome_build hg38 cell_type Neurosphere cultured cell ganglionic eminence derived biosample_type Stem cell biosample_term_id CL:0000047 tissue_category Brain encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27me3 assay ChIP-seq file_format bed broadPeak-lifted file_size 7,520,867 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/27/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/UCSF-UBC.Neurosphere_Cultured_Cells_Ganglionic_Eminence_Derived.H3K27me3.HuFNSC01.broadPeak.lifted.bed.gz processed_file_md5 fe79649e0e0c5f0875ff7b624c1c3a26 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/UCSF-UBC.Neurosphere_Cultured_Cells_Ganglionic_Eminence_Derived.H3K27me3.HuFNSC01.broadPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/UCSF-UBC.Neurosphere_Cultured_Cells_Ganglionic_Eminence_Derived.H3K27me3.HuFNSC01.broadPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/broadPeak/UCSF-UBC.Neurosphere_Cultured_Cells_Ganglionic_Eminence_Derived.H3K27me3.HuFNSC01.broadPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/broadpeak/UCSF-UBC.Neurosphere_Cultured_Cells_Ganglionic_Eminence_Derived.H3K27me3.HuFNSC01.broadPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/broadpeak/ raw_file_md5 b397cb3defdbae5bfb576e57794df652 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27me3 peaks track_description version=2015;Original_cell_type=Neurosphere Cultured Cells Ganglionic Eminence Derived;Donor=HuFNSC01;schema=BED3+9;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Nervous life_stage Unknown track_name ROADMAP Neurosphere cultured cell ganglionic eminence derived ChIP-seq H3K27me3-histone-mark peaks (broadPeak-lifted) [Histone ChIP-seq peaks]
H3K27me3 • Cingulate gyrus NGRMPLHR2ZQZ5J • ROADMAP25693563 ChIP-seq Cingulate gyrus Histone Show metadata Download track Track metadata identifier NGRMPLHR2ZQZ5J data_source ROADMAP Download track Download number_of_intervals 347,681 bp_covered 710,613,822 output_type peaks genome_build hg38 cell_type Cingulate gyrus biosample_type Primary tissue biosample_term_id UBERON:0002967 tissue_category Brain encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27me3 assay ChIP-seq file_format bed broadPeak-lifted file_size 11,535,973 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/27/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/BI.Brain_Cingulate_Gyrus.H3K27me3.149.broadPeak.lifted.bed.gz processed_file_md5 021875ee6426908427ddd535ae0a5c6c wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/BI.Brain_Cingulate_Gyrus.H3K27me3.149.broadPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/BI.Brain_Cingulate_Gyrus.H3K27me3.149.broadPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/broadPeak/BI.Brain_Cingulate_Gyrus.H3K27me3.149.broadPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/broadpeak/BI.Brain_Cingulate_Gyrus.H3K27me3.149.broadPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/broadpeak/ raw_file_md5 1c93990c0086b82e036d1817816abf1f data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27me3 peaks track_description version=2015;Original_cell_type=Brain Cingulate Gyrus;Donor=149;schema=BED3+9;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Nervous life_stage Unknown track_name ROADMAP Cingulate gyrus ChIP-seq H3K27me3-histone-mark peaks (broadPeak-lifted) [Histone ChIP-seq peaks]
H3K27me3 • CD4+ memory NGRMPLI7NCC5GC • ROADMAP25693563 ChIP-seq CD4+ memory Histone Show metadata Download track Track metadata identifier NGRMPLI7NCC5GC data_source ROADMAP Download track Download number_of_intervals 417,080 bp_covered 911,638,220 output_type peaks genome_build hg38 cell_type CD4+ memory biosample_type Primary cell biosample_term_id CL:0000897 tissue_category Blood encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27me3 assay ChIP-seq file_format bed broadPeak-lifted file_size 13,644,324 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/27/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/BI.CD4_Memory_Primary_Cells.H3K27me3.Donor_100_7_pooled_leukopaks_Jan_7_2011.broadPeak.lifted.bed.gz processed_file_md5 b6d9353d16bda6a23c624659f4ccbfe1 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/BI.CD4_Memory_Primary_Cells.H3K27me3.Donor_100_7_pooled_leukopaks_Jan_7_2011.broadPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/BI.CD4_Memory_Primary_Cells.H3K27me3.Donor_100_7_pooled_leukopaks_Jan_7_2011.broadPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/broadPeak/BI.CD4_Memory_Primary_Cells.H3K27me3.Donor_100_7_pooled_leukopaks_Jan_7_2011.broadPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/broadpeak/BI.CD4_Memory_Primary_Cells.H3K27me3.Donor_100_7_pooled_leukopaks_Jan_7_2011.broadPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/broadpeak/ raw_file_md5 78a9dc07247ccd5cfcdce8390f85f2ac data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27me3 peaks track_description version=2015;Original_cell_type=CD4 Memory Primary Cells;Donor=100_7_pooled_leukopaks_Jan_7_2011;schema=BED3+9;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Cardiovascular life_stage Unknown track_name ROADMAP CD4+ memory ChIP-seq H3K27me3-histone-mark peaks (broadPeak-lifted) [Histone ChIP-seq peaks]
H3K27me3 • Brain NGRMPLKEZRCE6T • ROADMAP25693563 ChIP-seq Brain Histone Show metadata Download track Track metadata identifier NGRMPLKEZRCE6T data_source ROADMAP Download track Download number_of_intervals 18,579 bp_covered 17,621,669 output_type peaks genome_build hg38 cell_type Brain biosample_type Primary tissue biosample_term_id UBERON:0000955 tissue_category Brain encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27me3 assay ChIP-seq file_format bed narrowPeak-lifted file_size 488,011 downloaded_date 08/15/2018 release_date 11/30/2014 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/UCSF-UBC.Fetal_Brain.H3K27me3.HuFNSC02.narrowPeak.lifted.bed.gz processed_file_md5 4e0a79232f94eb22aafa27d05144dccf wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/UCSF-UBC.Fetal_Brain.H3K27me3.HuFNSC02.narrowPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/UCSF-UBC.Fetal_Brain.H3K27me3.HuFNSC02.narrowPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/narrowPeak/UCSF-UBC.Fetal_Brain.H3K27me3.HuFNSC02.narrowPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/narrowpeak/UCSF-UBC.Fetal_Brain.H3K27me3.HuFNSC02.narrowPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/narrowpeak/ raw_file_md5 8d6e51da25f1a673c56fa0d663349fa7 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27me3 peaks track_description version=2015;Original_cell_type=Fetal Brain;Donor=HuFNSC02;schema=BED3+10;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Nervous life_stage Fetal track_name ROADMAP Brain ChIP-seq H3K27me3-histone-mark peaks (narrowPeak-lifted) [Life stage: Fetal] [Histone ChIP-seq peaks]
H3K27me3 • ES-I3 NGRMPLMEV4LU34 • ROADMAP25693563 ChIP-seq ES-I3 Histone Show metadata Download track Track metadata identifier NGRMPLMEV4LU34 data_source ROADMAP Download track Download number_of_intervals 17,930 bp_covered 93,353,527 output_type peaks genome_build hg38 cell_type ES-I3 biosample_type Stem cell biosample_term_id EFO:0007076 tissue_category Embryo encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27me3 assay ChIP-seq file_format bed gappedPeak-lifted file_size 1,055,103 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/28/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.ES-I3.H3K27me3.Solexa-10213-15380.gappedPeak.lifted.bed.gz processed_file_md5 de3c9a0d8a9398b11b85a383a9dd6497 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.ES-I3.H3K27me3.Solexa-10213-15380.gappedPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.ES-I3.H3K27me3.Solexa-10213-15380.gappedPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/gappedPeak/BI.ES-I3.H3K27me3.Solexa-10213-15380.gappedPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/gappedpeak/BI.ES-I3.H3K27me3.Solexa-10213-15380.gappedPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/gappedpeak/ raw_file_md5 49052fcf9d8b367ffc10c27140357baa data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27me3 peaks track_description version=2015;Original_cell_type=ES-I3;Donor=Solexa-10213-15380;schema=BED3+15;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=EFO:0007076;is_hg38_lifted=yes system_category Embryo life_stage Embryonic track_name ROADMAP ES-I3 ChIP-seq H3K27me3-histone-mark peaks (gappedPeak-lifted) [Life stage: Embryonic] [Histone ChIP-seq peaks]
H3K27me3 • Chondrocytes NGRMPLSE5UZCOL • ROADMAP25693563 ChIP-seq Chondrocytes Histone Show metadata Download track Track metadata identifier NGRMPLSE5UZCOL data_source ROADMAP Download track Download number_of_intervals 235,194 bp_covered 705,505,790 output_type peaks genome_build hg38 cell_type Chondrocytes biosample_type In vitro differentiated cells biosample_term_id CL:0000138 tissue_category Bone encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27me3 assay ChIP-seq file_format bed broadPeak-lifted file_size 7,808,136 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/27/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/BI.Chondrocytes_from_Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K27me3.59.broadPeak.lifted.bed.gz processed_file_md5 49265da0fc2e7186aab2296380097d13 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/BI.Chondrocytes_from_Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K27me3.59.broadPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/BI.Chondrocytes_from_Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K27me3.59.broadPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/broadPeak/BI.Chondrocytes_from_Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K27me3.59.broadPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/broadpeak/BI.Chondrocytes_from_Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K27me3.59.broadPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/broadpeak/ raw_file_md5 cc23018e00f376424f29249e74da2cb9 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27me3 peaks track_description version=2015;Original_cell_type=Chondrocytes from Bone Marrow Derived Mesenchymal Stem Cell Cultured Cells;Donor=59;schema=BED3+9;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Skeletal life_stage Unknown track_name ROADMAP Chondrocytes ChIP-seq H3K27me3-histone-mark peaks (broadPeak-lifted) [Histone ChIP-seq peaks]
H3K27me3 • CD4+ memory NGRMPLSOYZ2EE3 • ROADMAP25693563 ChIP-seq CD4+ memory Histone Show metadata Download track Track metadata identifier NGRMPLSOYZ2EE3 data_source ROADMAP Download track Download number_of_intervals 65,972 bp_covered 25,997,152 output_type peaks genome_build hg38 cell_type CD4+ memory biosample_type Primary cell biosample_term_id CL:0000897 tissue_category Blood encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27me3 assay ChIP-seq file_format bed narrowPeak-lifted file_size 1,774,874 downloaded_date 08/15/2018 release_date 11/30/2014 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/BI.CD4_Memory_Primary_Cells.H3K27me3.Donor_100_7_pooled_leukopaks_Jan_7_2011.narrowPeak.lifted.bed.gz processed_file_md5 cbf63a59c5c1d92d967937145b343440 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/BI.CD4_Memory_Primary_Cells.H3K27me3.Donor_100_7_pooled_leukopaks_Jan_7_2011.narrowPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/BI.CD4_Memory_Primary_Cells.H3K27me3.Donor_100_7_pooled_leukopaks_Jan_7_2011.narrowPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/narrowPeak/BI.CD4_Memory_Primary_Cells.H3K27me3.Donor_100_7_pooled_leukopaks_Jan_7_2011.narrowPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/narrowpeak/BI.CD4_Memory_Primary_Cells.H3K27me3.Donor_100_7_pooled_leukopaks_Jan_7_2011.narrowPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/narrowpeak/ raw_file_md5 41fcc66a270326d9e2c381b4c7c55fd2 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27me3 peaks track_description version=2015;Original_cell_type=CD4 Memory Primary Cells;Donor=100_7_pooled_leukopaks_Jan_7_2011;schema=BED3+10;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Cardiovascular life_stage Unknown track_name ROADMAP CD4+ memory ChIP-seq H3K27me3-histone-mark peaks (narrowPeak-lifted) [Histone ChIP-seq peaks]
H3K27me3 • UCSF-4star NGRMPLTUWIE5OF • ROADMAP25693563 ChIP-seq UCSF-4star Histone Show metadata Download track Track metadata identifier NGRMPLTUWIE5OF data_source ROADMAP Download track Download number_of_intervals 86,915 bp_covered 232,374,038 output_type peaks genome_build hg38 cell_type UCSF-4star biosample_type Stem cell biosample_term_id CL:0002322 tissue_category Embryo encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27me3 assay ChIP-seq file_format bed gappedPeak-lifted file_size 4,405,171 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/28/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSF-UBC.UCSF-4star.H3K27me3.A14672.gappedPeak.lifted.bed.gz processed_file_md5 566cdbf03ceee951b717112122f16c1d wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSF-UBC.UCSF-4star.H3K27me3.A14672.gappedPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSF-UBC.UCSF-4star.H3K27me3.A14672.gappedPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/gappedPeak/UCSF-UBC.UCSF-4star.H3K27me3.A14672.gappedPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/gappedpeak/UCSF-UBC.UCSF-4star.H3K27me3.A14672.gappedPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/gappedpeak/ raw_file_md5 93e2c9d70d64b7f1a97a9b712142c301 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27me3 peaks track_description version=2015;Original_cell_type=UCSF-4star;Donor=A14672;schema=BED3+15;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Embryo life_stage Embryonic track_name ROADMAP UCSF-4star ChIP-seq H3K27me3-histone-mark peaks (gappedPeak-lifted) [Life stage: Embryonic] [Histone ChIP-seq peaks]
H3K27me3 • Myoepithelial cell NGRMPLTX3ZATPO • ROADMAP25693563 ChIP-seq Myoepithelial cell Histone Show metadata Download track Track metadata identifier NGRMPLTX3ZATPO data_source ROADMAP Download track Download number_of_intervals 600,717 bp_covered 871,242,063 output_type peaks genome_build hg38 cell_type Myoepithelial cell biosample_type Primary cell biosample_term_id CL:0000185 tissue_category Breast encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27me3 assay ChIP-seq file_format bed broadPeak-lifted file_size 19,202,049 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/27/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/UCSF-UBC.Breast_Myoepithelial_Cells.H3K27me3.RM066.broadPeak.lifted.bed.gz processed_file_md5 2c35d90072006b6a1f429a2fc80ba271 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/UCSF-UBC.Breast_Myoepithelial_Cells.H3K27me3.RM066.broadPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/UCSF-UBC.Breast_Myoepithelial_Cells.H3K27me3.RM066.broadPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/broadPeak/UCSF-UBC.Breast_Myoepithelial_Cells.H3K27me3.RM066.broadPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/broadpeak/UCSF-UBC.Breast_Myoepithelial_Cells.H3K27me3.RM066.broadPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/broadpeak/ raw_file_md5 a744c20b30da5dcd0a66313059b76510 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27me3 peaks track_description version=2015;Original_cell_type=Breast Myoepithelial Cells;Donor=RM066;schema=BED3+9;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=CL:0002324;is_hg38_lifted=yes system_category Reproductive life_stage Unknown track_name ROADMAP Myoepithelial cell ChIP-seq H3K27me3-histone-mark peaks (broadPeak-lifted) [Histone ChIP-seq peaks]
H3K27me3 • CD56+ NGRMPLUZB72EFL • ROADMAP25693563 ChIP-seq CD56+ Histone Show metadata Download track Track metadata identifier NGRMPLUZB72EFL data_source ROADMAP Download track Download number_of_intervals 46,764 bp_covered 208,825,931 output_type peaks genome_build hg38 cell_type CD56+ biosample_type Primary cell biosample_term_id NCIT:C129251 tissue_category Blood encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27me3 assay ChIP-seq file_format bed gappedPeak-lifted file_size 2,596,537 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/28/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UW.CD56_Primary_Cells.H3K27me3.RO_01679.Histone.DS22594.gappedPeak.lifted.bed.gz processed_file_md5 fbf63f8fdb7309a5ca3ad12b7bd8088e wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UW.CD56_Primary_Cells.H3K27me3.RO_01679.Histone.DS22594.gappedPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UW.CD56_Primary_Cells.H3K27me3.RO_01679.Histone.DS22594.gappedPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/gappedPeak/UW.CD56_Primary_Cells.H3K27me3.RO_01679.Histone.DS22594.gappedPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/gappedpeak/UW.CD56_Primary_Cells.H3K27me3.RO_01679.Histone.DS22594.gappedPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/gappedpeak/ raw_file_md5 4feac9f3c3befbd44776f1ef1b16364e data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27me3 peaks track_description version=2015;Original_cell_type=CD56 Primary Cells;Donor=RO_01679.Histone.DS22594;schema=BED3+15;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Cardiovascular life_stage Unknown track_name ROADMAP CD56+ ChIP-seq H3K27me3-histone-mark peaks (gappedPeak-lifted) [Histone ChIP-seq peaks]
H3K27me3 • HUES6 NGRMPLWF7AMA2Q • ROADMAP25693563 ChIP-seq HUES6 Histone Show metadata Download track Track metadata identifier NGRMPLWF7AMA2Q data_source ROADMAP Download track Download number_of_intervals 47,301 bp_covered 250,387,785 output_type peaks genome_build hg38 cell_type HUES6 biosample_type Primary culture biosample_term_id EFO:0007086 tissue_category Embryo encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27me3 assay ChIP-seq file_format bed gappedPeak-lifted file_size 2,866,214 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/28/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.HUES6.H3K27me3.Lib_XZ_20101004_11--ChIP_XZ_20100930_11_ES_cell_HUES_6_H3K27Me3.gappedPeak.lifted.bed.gz processed_file_md5 624d8717f136c29fcf9eabeade586af1 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.HUES6.H3K27me3.Lib_XZ_20101004_11--ChIP_XZ_20100930_11_ES_cell_HUES_6_H3K27Me3.gappedPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.HUES6.H3K27me3.Lib_XZ_20101004_11--ChIP_XZ_20100930_11_ES_cell_HUES_6_H3K27Me3.gappedPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/gappedPeak/BI.HUES6.H3K27me3.Lib_XZ_20101004_11--ChIP_XZ_20100930_11_ES_cell_HUES_6_H3K27Me3.gappedPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/gappedpeak/BI.HUES6.H3K27me3.Lib_XZ_20101004_11--ChIP_XZ_20100930_11_ES_cell_HUES_6_H3K27Me3.gappedPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/gappedpeak/ raw_file_md5 fbaf32d14c1ea6d0e39c0e56b3850ade data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27me3 peaks track_description version=2015;Original_cell_type=HUES6;Donor=Lib_XZ_20101004_11--ChIP_XZ_20100930_11_ES_cell_HUES_6_H3K27Me3;schema=BED3+15;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=EFO:0007086;is_hg38_lifted=yes system_category Embryo life_stage Embryonic track_name ROADMAP HUES6 ChIP-seq H3K27me3-histone-mark peaks (gappedPeak-lifted) [Life stage: Embryonic] [Histone ChIP-seq peaks]
H3K27me3 • Small intestine NGRMPLXNLJBQAL • ROADMAP25693563 ChIP-seq Small intestine Histone Show metadata Download track Track metadata identifier NGRMPLXNLJBQAL data_source ROADMAP Download track Download number_of_intervals 82,969 bp_covered 304,134,999 output_type peaks genome_build hg38 cell_type Small intestine biosample_type Primary tissue biosample_term_id UBERON:0002108 tissue_category Digestive encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27me3 assay ChIP-seq file_format bed gappedPeak-lifted file_size 4,595,533 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/28/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UW.Fetal_Intestine_Small.H3K27me3.H-24595.Histone.DS22556.gappedPeak.lifted.bed.gz processed_file_md5 626c4015b843e49f4219315794abf8a1 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UW.Fetal_Intestine_Small.H3K27me3.H-24595.Histone.DS22556.gappedPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UW.Fetal_Intestine_Small.H3K27me3.H-24595.Histone.DS22556.gappedPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/gappedPeak/UW.Fetal_Intestine_Small.H3K27me3.H-24595.Histone.DS22556.gappedPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/gappedpeak/UW.Fetal_Intestine_Small.H3K27me3.H-24595.Histone.DS22556.gappedPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/gappedpeak/ raw_file_md5 2eab4aaf10560d566e66508c8096ee0c data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27me3 peaks track_description version=2015;Original_cell_type=Fetal Intestine Small;Donor=H-24595.Histone.DS22556;schema=BED3+15;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Digestive life_stage Fetal track_name ROADMAP Small intestine ChIP-seq H3K27me3-histone-mark peaks (gappedPeak-lifted) [Life stage: Fetal] [Histone ChIP-seq peaks]
H3K27me3 • Fibroblast NGRMPLY2RZNGUB • ROADMAP25693563 ChIP-seq Fibroblast Histone Show metadata Download track Track metadata identifier NGRMPLY2RZNGUB data_source ROADMAP Download track Download number_of_intervals 5,583 bp_covered 2,868,367 output_type peaks genome_build hg38 cell_type Fibroblast biosample_type Primary cell biosample_term_id CL:0000057 tissue_category Breast encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27me3 assay ChIP-seq file_format bed narrowPeak-lifted file_size 175,697 downloaded_date 08/15/2018 release_date 11/30/2014 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/UCSF-UBC.Breast_Fibroblast_Primary_Cells.H3K27me3.RM071.narrowPeak.lifted.bed.gz processed_file_md5 adcf9310f469384db8d1f81c898a307f wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/UCSF-UBC.Breast_Fibroblast_Primary_Cells.H3K27me3.RM071.narrowPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/UCSF-UBC.Breast_Fibroblast_Primary_Cells.H3K27me3.RM071.narrowPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/narrowPeak/UCSF-UBC.Breast_Fibroblast_Primary_Cells.H3K27me3.RM071.narrowPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/narrowpeak/UCSF-UBC.Breast_Fibroblast_Primary_Cells.H3K27me3.RM071.narrowPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/narrowpeak/ raw_file_md5 ab43ce05c74e803b7af953e8af7fc935 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27me3 peaks track_description version=2015;Original_cell_type=Fibroblast of breast Primary Cells;Donor=RM071;schema=BED3+10;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Reproductive life_stage Unknown track_name ROADMAP Fibroblast ChIP-seq H3K27me3-histone-mark peaks (narrowPeak-lifted) [Histone ChIP-seq peaks]
H3K27me3 • CD184+ endoderm cell NGRMPM2MBZRQKU • ROADMAP25693563 ChIP-seq CD184+ endoderm cell Histone Show metadata Download track Track metadata identifier NGRMPM2MBZRQKU data_source ROADMAP Download track Download number_of_intervals 113,678 bp_covered 93,792,102 output_type peaks genome_build hg38 cell_type CD184+ endoderm cell biosample_type In vitro differentiated cells biosample_term_id CL:0000223 tissue_category Stem Cell encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27me3 assay ChIP-seq file_format bed narrowPeak-lifted file_size 3,573,817 downloaded_date 08/15/2018 release_date 11/30/2014 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/BI.hESC_Derived_CD184+_Endoderm_Cultured_Cells.H3K27me3.DNA_Lib_239.narrowPeak.lifted.bed.gz processed_file_md5 6daa8808a995d50d04d87e350f2cae68 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/BI.hESC_Derived_CD184+_Endoderm_Cultured_Cells.H3K27me3.DNA_Lib_239.narrowPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/BI.hESC_Derived_CD184+_Endoderm_Cultured_Cells.H3K27me3.DNA_Lib_239.narrowPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/narrowPeak/BI.hESC_Derived_CD184+_Endoderm_Cultured_Cells.H3K27me3.DNA_Lib_239.narrowPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/narrowpeak/BI.hESC_Derived_CD184+_Endoderm_Cultured_Cells.H3K27me3.DNA_Lib_239.narrowPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/narrowpeak/ raw_file_md5 371e82e6b73e50d7db0f2bc7b2bae361 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27me3 peaks track_description version=2015;Original_cell_type=hESC Derived CD184+ Endoderm Cultured Cells;Donor=DNA_Lib_239;schema=BED3+10;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Stem Cell life_stage Unknown track_name ROADMAP CD184+ endoderm cell ChIP-seq H3K27me3-histone-mark peaks (narrowPeak-lifted) [Histone ChIP-seq peaks]
H3K27me3 • CD4+ memory NGRMPM2WVGZK5H • ROADMAP25693563 ChIP-seq CD4+ memory Histone Show metadata Download track Track metadata identifier NGRMPM2WVGZK5H data_source ROADMAP Download track Download number_of_intervals 42,815 bp_covered 216,652,045 output_type peaks genome_build hg38 cell_type CD4+ memory biosample_type Primary cell biosample_term_id CL:0000897 tissue_category Blood encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27me3 assay ChIP-seq file_format bed gappedPeak-lifted file_size 2,170,565 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/28/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.CD4_Memory_Primary_Cells.H3K27me3.Donor_101_8_pooled_leukopaks_Jan_20_2011.gappedPeak.lifted.bed.gz processed_file_md5 cf260d9317ce2f7492a5af5dc182542b wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.CD4_Memory_Primary_Cells.H3K27me3.Donor_101_8_pooled_leukopaks_Jan_20_2011.gappedPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.CD4_Memory_Primary_Cells.H3K27me3.Donor_101_8_pooled_leukopaks_Jan_20_2011.gappedPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/gappedPeak/BI.CD4_Memory_Primary_Cells.H3K27me3.Donor_101_8_pooled_leukopaks_Jan_20_2011.gappedPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/gappedpeak/BI.CD4_Memory_Primary_Cells.H3K27me3.Donor_101_8_pooled_leukopaks_Jan_20_2011.gappedPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/gappedpeak/ raw_file_md5 0abfd775ffeaff33359da6f261f6de4a data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27me3 peaks track_description version=2015;Original_cell_type=CD4 Memory Primary Cells;Donor=101_8_pooled_leukopaks_Jan_20_2011;schema=BED3+15;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Cardiovascular life_stage Unknown track_name ROADMAP CD4+ memory ChIP-seq H3K27me3-histone-mark peaks (gappedPeak-lifted) [Histone ChIP-seq peaks]
H3K27me3 • CD8+ naive T cell NGRMPM5LO2TXXW • ROADMAP25693563 ChIP-seq CD8+ naive T cell Histone Show metadata Download track Track metadata identifier NGRMPM5LO2TXXW data_source ROADMAP Download track Download number_of_intervals 117,028 bp_covered 495,751,495 output_type peaks genome_build hg38 cell_type CD8+ naive T cell biosample_type Primary cell biosample_term_id CL:0000900 tissue_category Blood encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27me3 assay ChIP-seq file_format bed gappedPeak-lifted file_size 6,447,641 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/28/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSF-UBC.CD8_Naive_Primary_Cells.H3K27me3.TC001.gappedPeak.lifted.bed.gz processed_file_md5 2d6bc59fafe077768c154e4f07c18c75 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSF-UBC.CD8_Naive_Primary_Cells.H3K27me3.TC001.gappedPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSF-UBC.CD8_Naive_Primary_Cells.H3K27me3.TC001.gappedPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/gappedPeak/UCSF-UBC.CD8_Naive_Primary_Cells.H3K27me3.TC001.gappedPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/gappedpeak/UCSF-UBC.CD8_Naive_Primary_Cells.H3K27me3.TC001.gappedPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/gappedpeak/ raw_file_md5 b31015a4a5550c5f4e07ba719a9d9615 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27me3 peaks track_description version=2015;Original_cell_type=CD8 Naive Primary Cells;Donor=TC001;schema=BED3+15;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Cardiovascular life_stage Unknown track_name ROADMAP CD8+ naive T cell ChIP-seq H3K27me3-histone-mark peaks (gappedPeak-lifted) [Histone ChIP-seq peaks]
H3K27me3 • Mesenchymal stem cell NGRMPM6IQUPEJF • ROADMAP25693563 ChIP-seq Mesenchymal stem cell Histone Show metadata Download track Track metadata identifier NGRMPM6IQUPEJF data_source ROADMAP Download track Download number_of_intervals 80,505 bp_covered 239,560,944 output_type peaks genome_build hg38 cell_type Mesenchymal stem cell biosample_type Stem cell biosample_term_id CL:0000134 tissue_category Connective Tissue encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27me3 assay ChIP-seq file_format bed gappedPeak-lifted file_size 4,545,914 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/28/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.H1_Derived_Mesenchymal_Stem_Cells.H3K27me3.SK439.gappedPeak.lifted.bed.gz processed_file_md5 75edf0529e1bf572efb61110a4b3ec47 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.H1_Derived_Mesenchymal_Stem_Cells.H3K27me3.SK439.gappedPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.H1_Derived_Mesenchymal_Stem_Cells.H3K27me3.SK439.gappedPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/gappedPeak/UCSD.H1_Derived_Mesenchymal_Stem_Cells.H3K27me3.SK439.gappedPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/gappedpeak/UCSD.H1_Derived_Mesenchymal_Stem_Cells.H3K27me3.SK439.gappedPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/gappedpeak/ raw_file_md5 be70fa96100dd1b2e229803f4f268ca6 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27me3 peaks track_description version=2015;Original_cell_type=H1 Derived Mesenchymal Stem Cells;Donor=SK439;schema=BED3+15;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Skeletal life_stage Embryonic track_name ROADMAP Mesenchymal stem cell ChIP-seq H3K27me3-histone-mark peaks (gappedPeak-lifted) [Life stage: Embryonic] [Histone ChIP-seq peaks]
H3K27me3 • Brain NGRMPM77NMUUFM • ROADMAP25693563 ChIP-seq Brain Histone Show metadata Download track Track metadata identifier NGRMPM77NMUUFM data_source ROADMAP Download track Download number_of_intervals 39,894 bp_covered 10,756,458 output_type peaks genome_build hg38 cell_type Brain biosample_type Primary tissue biosample_term_id UBERON:0000955 tissue_category Brain encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27me3 assay ChIP-seq file_format bed narrowPeak-lifted file_size 1,069,125 downloaded_date 08/15/2018 release_date 11/30/2014 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/UCSF-UBC.Fetal_Brain.H3K27me3.HuFNSC-T.narrowPeak.lifted.bed.gz processed_file_md5 3818bab8295004edda0bb28c346e5cc1 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/UCSF-UBC.Fetal_Brain.H3K27me3.HuFNSC-T.narrowPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/UCSF-UBC.Fetal_Brain.H3K27me3.HuFNSC-T.narrowPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/narrowPeak/UCSF-UBC.Fetal_Brain.H3K27me3.HuFNSC-T.narrowPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/narrowpeak/UCSF-UBC.Fetal_Brain.H3K27me3.HuFNSC-T.narrowPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/narrowpeak/ raw_file_md5 c8b567901b26ea571ca7c11dfe9a0f4f data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27me3 peaks track_description version=2015;Original_cell_type=Fetal Brain;Donor=HuFNSC-T;schema=BED3+10;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Nervous life_stage Fetal track_name ROADMAP Brain ChIP-seq H3K27me3-histone-mark peaks (narrowPeak-lifted) [Life stage: Fetal] [Histone ChIP-seq peaks]
H3K27me3 • CD184+ endoderm cell NGRMPMAIWWSZCE • ROADMAP25693563 ChIP-seq CD184+ endoderm cell Histone Show metadata Download track Track metadata identifier NGRMPMAIWWSZCE data_source ROADMAP Download track Download number_of_intervals 41,571 bp_covered 314,538,974 output_type peaks genome_build hg38 cell_type CD184+ endoderm cell biosample_type In vitro differentiated cells biosample_term_id CL:0000223 tissue_category Stem Cell encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27me3 assay ChIP-seq file_format bed gappedPeak-lifted file_size 2,455,565 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/28/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.hESC_Derived_CD184+_Endoderm_Cultured_Cells.H3K27me3.DNA_Lib_246.gappedPeak.lifted.bed.gz processed_file_md5 c8dca730c2b83c88a3bbc1438c0a207c wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.hESC_Derived_CD184+_Endoderm_Cultured_Cells.H3K27me3.DNA_Lib_246.gappedPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.hESC_Derived_CD184+_Endoderm_Cultured_Cells.H3K27me3.DNA_Lib_246.gappedPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/gappedPeak/BI.hESC_Derived_CD184+_Endoderm_Cultured_Cells.H3K27me3.DNA_Lib_246.gappedPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/gappedpeak/BI.hESC_Derived_CD184+_Endoderm_Cultured_Cells.H3K27me3.DNA_Lib_246.gappedPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/gappedpeak/ raw_file_md5 91dd92f3001a0fd951f44aa1f7b5f895 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27me3 peaks track_description version=2015;Original_cell_type=hESC Derived CD184+ Endoderm Cultured Cells;Donor=DNA_Lib_246;schema=BED3+15;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Stem Cell life_stage Unknown track_name ROADMAP CD184+ endoderm cell ChIP-seq H3K27me3-histone-mark peaks (gappedPeak-lifted) [Histone ChIP-seq peaks]