H3K27me3 • Mucosa NGRMPOZVSSWQMU • ROADMAP25693563 ChIP-seq Mucosa Histone Show metadata Download track Track metadata identifier NGRMPOZVSSWQMU data_source ROADMAP Download track Download number_of_intervals 67,460 bp_covered 324,115,265 output_type peaks genome_build hg38 cell_type Mucosa biosample_type Primary tissue biosample_term_id UBERON:0000344 tissue_category Digestive encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27me3 assay ChIP-seq file_format bed gappedPeak-lifted file_size 3,755,337 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/28/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.Duodenum_Mucosa.H3K27me3.61.gappedPeak.lifted.bed.gz processed_file_md5 cd7db2eabe3dbcf34ba19f7bec46c624 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.Duodenum_Mucosa.H3K27me3.61.gappedPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.Duodenum_Mucosa.H3K27me3.61.gappedPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/gappedPeak/BI.Duodenum_Mucosa.H3K27me3.61.gappedPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/gappedpeak/BI.Duodenum_Mucosa.H3K27me3.61.gappedPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/gappedpeak/ raw_file_md5 a8eb88b89404baa928e182f82266ca44 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27me3 peaks track_description version=2015;Original_cell_type=Duodenum Mucosa;Donor=61;schema=BED3+15;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Digestive life_stage Unknown track_name ROADMAP Mucosa ChIP-seq H3K27me3-histone-mark peaks (gappedPeak-lifted) [Histone ChIP-seq peaks]
H3K27me3 • Pancreatic islets NGRMPPAA2DOWL2 • ROADMAP25693563 ChIP-seq Pancreatic islets Histone Show metadata Download track Track metadata identifier NGRMPPAA2DOWL2 data_source ROADMAP Download track Download number_of_intervals 40,821 bp_covered 128,029,132 output_type peaks genome_build hg38 cell_type Pancreatic islets biosample_type Primary tissue biosample_term_id UBERON:0000006 tissue_category Pancreas encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27me3 assay ChIP-seq file_format bed gappedPeak-lifted file_size 2,043,208 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/28/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.Pancreatic_Islets.H3K27me3.pancreatic_islets_normal_3_27_09.gappedPeak.lifted.bed.gz processed_file_md5 c11117e384adc1b673eed814ccdc0a16 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.Pancreatic_Islets.H3K27me3.pancreatic_islets_normal_3_27_09.gappedPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.Pancreatic_Islets.H3K27me3.pancreatic_islets_normal_3_27_09.gappedPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/gappedPeak/BI.Pancreatic_Islets.H3K27me3.pancreatic_islets_normal_3_27_09.gappedPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/gappedpeak/BI.Pancreatic_Islets.H3K27me3.pancreatic_islets_normal_3_27_09.gappedPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/gappedpeak/ raw_file_md5 da04a5f492914e67e98db55096015f0a data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27me3 peaks track_description version=2015;Original_cell_type=Pancreatic Islets;Donor=pancreatic_islets_normal_3_27_09;schema=BED3+15;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Endocrine life_stage Unknown track_name ROADMAP Pancreatic islets ChIP-seq H3K27me3-histone-mark peaks (gappedPeak-lifted) [Histone ChIP-seq peaks]
H3K27me3 • Neuronal progenitor cell NGRMPPAUON74ZI • ROADMAP25693563 ChIP-seq Neuronal progenitor cell Histone Show metadata Download track Track metadata identifier NGRMPPAUON74ZI data_source ROADMAP Download track Download number_of_intervals 33,456 bp_covered 12,612,149 output_type peaks genome_build hg38 cell_type Neuronal progenitor cell biosample_type In vitro differentiated cells biosample_term_id CL:0000047 tissue_category Stem Cell encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27me3 assay ChIP-seq file_format bed narrowPeak-lifted file_size 1,016,691 downloaded_date 08/15/2018 release_date 11/30/2014 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H3K27me3.AK409.narrowPeak.lifted.bed.gz processed_file_md5 209570fd55946f1a30cdddc484437409 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H3K27me3.AK409.narrowPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H3K27me3.AK409.narrowPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/narrowPeak/UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H3K27me3.AK409.narrowPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/narrowpeak/UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H3K27me3.AK409.narrowPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/narrowpeak/ raw_file_md5 ae6ec0772f1810695241cf0bba03bc24 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27me3 peaks track_description version=2015;Original_cell_type=H1 Derived Neuronal Progenitor Cultured Cells;Donor=AK409;schema=BED3+10;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Stem Cell life_stage Embryonic track_name ROADMAP Neuronal progenitor cell ChIP-seq H3K27me3-histone-mark peaks (narrowPeak-lifted) [Life stage: Embryonic] [Histone ChIP-seq peaks]
H3K27me3 • Smooth muscle cell NGRMPPBMB7EJ4N • ROADMAP25693563 ChIP-seq Smooth muscle cell Histone Show metadata Download track Track metadata identifier NGRMPPBMB7EJ4N data_source ROADMAP Download track Download number_of_intervals 42,343 bp_covered 20,948,858 output_type peaks genome_build hg38 cell_type Smooth muscle cell biosample_type Primary tissue biosample_term_id CL:0000192 tissue_category Digestive encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27me3 assay ChIP-seq file_format bed narrowPeak-lifted file_size 1,198,239 downloaded_date 08/15/2018 release_date 11/30/2014 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/BI.Colon_Smooth_Muscle.H3K27me3.Donor_83_REMC_18.narrowPeak.lifted.bed.gz processed_file_md5 894a5a00bacc4d406870eb8f0a514616 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/BI.Colon_Smooth_Muscle.H3K27me3.Donor_83_REMC_18.narrowPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/BI.Colon_Smooth_Muscle.H3K27me3.Donor_83_REMC_18.narrowPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/narrowPeak/BI.Colon_Smooth_Muscle.H3K27me3.Donor_83_REMC_18.narrowPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/narrowpeak/BI.Colon_Smooth_Muscle.H3K27me3.Donor_83_REMC_18.narrowPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/narrowpeak/ raw_file_md5 a6f6e1c3d61c907c3273f40465398cfc data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27me3 peaks track_description version=2015;Original_cell_type=Colonic smooth muscle cell;Donor=83_REMC_18;schema=BED3+10;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Digestive life_stage Unknown track_name ROADMAP Smooth muscle cell ChIP-seq H3K27me3-histone-mark peaks (narrowPeak-lifted) [Histone ChIP-seq peaks]
H3K27me3 • UCSF-4star NGRMPPEJNR36ST • ROADMAP25693563 ChIP-seq UCSF-4star Histone Show metadata Download track Track metadata identifier NGRMPPEJNR36ST data_source ROADMAP Download track Download number_of_intervals 795,905 bp_covered 759,920,197 output_type peaks genome_build hg38 cell_type UCSF-4star biosample_type Stem cell biosample_term_id CL:0002322 tissue_category Embryo encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27me3 assay ChIP-seq file_format bed broadPeak-lifted file_size 26,216,240 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/27/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/UCSF-UBC.UCSF-4Star.H3K27me3.A19299.broadPeak.lifted.bed.gz processed_file_md5 cba34e90886d748fa90a3c4462410749 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/UCSF-UBC.UCSF-4Star.H3K27me3.A19299.broadPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/UCSF-UBC.UCSF-4Star.H3K27me3.A19299.broadPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/broadPeak/UCSF-UBC.UCSF-4Star.H3K27me3.A19299.broadPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/broadpeak/UCSF-UBC.UCSF-4Star.H3K27me3.A19299.broadPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/broadpeak/ raw_file_md5 dd582af1c841d1032e4082edbc22ce08 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27me3 peaks track_description version=2015;Original_cell_type=UCSF-4Star;Donor=A19299;schema=BED3+9;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Embryo life_stage Embryonic track_name ROADMAP UCSF-4star ChIP-seq H3K27me3-histone-mark peaks (broadPeak-lifted) [Life stage: Embryonic] [Histone ChIP-seq peaks]
H3K27me3 • Mobilized CD34+ NGRMPPGZ5RMUJT • ROADMAP25693563 ChIP-seq Mobilized CD34+ Histone Show metadata Download track Track metadata identifier NGRMPPGZ5RMUJT data_source ROADMAP Download track Download number_of_intervals 1,153,255 bp_covered 792,663,091 output_type peaks genome_build hg38 cell_type Mobilized CD34+ biosample_type Primary cell biosample_term_id CL:0000037 tissue_category Blood encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27me3 assay ChIP-seq file_format bed broadPeak-lifted file_size 35,654,692 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/27/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/BI.Mobilized_CD34_Primary_Cells.H3K27me3.RO_01517.broadPeak.lifted.bed.gz processed_file_md5 de652d7332f83eccf46d6a2249a2454f wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/BI.Mobilized_CD34_Primary_Cells.H3K27me3.RO_01517.broadPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/BI.Mobilized_CD34_Primary_Cells.H3K27me3.RO_01517.broadPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/broadPeak/BI.Mobilized_CD34_Primary_Cells.H3K27me3.RO_01517.broadPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/broadpeak/BI.Mobilized_CD34_Primary_Cells.H3K27me3.RO_01517.broadPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/broadpeak/ raw_file_md5 cfe956c8cda9a1ffaaf98aacc1592c10 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27me3 peaks track_description version=2015;Original_cell_type=Mobilized CD34 Primary Cells;Donor=RO_01517;schema=BED3+9;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Cardiovascular life_stage Unknown track_name ROADMAP Mobilized CD34+ ChIP-seq H3K27me3-histone-mark peaks (broadPeak-lifted) [Histone ChIP-seq peaks]
H3K27me3 • IMR-90 NGRMPPHDWCPHLX • ROADMAP25693563 ChIP-seq IMR-90 Histone Show metadata Download track Track metadata identifier NGRMPPHDWCPHLX data_source ROADMAP Download track Download number_of_intervals 107,331 bp_covered 379,281,592 output_type peaks genome_build hg38 cell_type IMR-90 biosample_type Cell line biosample_term_id EFO:0001196 tissue_category Lung encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27me3 assay ChIP-seq file_format bed gappedPeak-lifted file_size 6,492,413 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/28/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.IMR90.H3K27me3.LL223.gappedPeak.lifted.bed.gz processed_file_md5 e7160199e6b92463ba1cfecf4d3385f6 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.IMR90.H3K27me3.LL223.gappedPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.IMR90.H3K27me3.LL223.gappedPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/gappedPeak/UCSD.IMR90.H3K27me3.LL223.gappedPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/gappedpeak/UCSD.IMR90.H3K27me3.LL223.gappedPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/gappedpeak/ raw_file_md5 4d04c0b150bda72fc9b031dca328ec1d data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27me3 peaks track_description version=2015;Original_cell_type=IMR 90;Donor=LL223;schema=BED3+15;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=EFO:0001196;is_hg38_lifted=yes system_category Respiratory life_stage Unknown track_name ROADMAP IMR-90 ChIP-seq H3K27me3-histone-mark peaks (gappedPeak-lifted) [Histone ChIP-seq peaks]
H3K27me3 • CD4+ CD25+ CD127- Treg NGRMPPHIQZMJQW • ROADMAP25693563 ChIP-seq CD4+ CD25+ CD127- Treg Histone Show metadata Download track Track metadata identifier NGRMPPHIQZMJQW data_source ROADMAP Download track Download number_of_intervals 135,333 bp_covered 56,010,824 output_type peaks genome_build hg38 cell_type CD4+ CD25+ CD127- Treg biosample_type Primary cell biosample_term_id CL:0002677 tissue_category Blood encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27me3 assay ChIP-seq file_format bed narrowPeak-lifted file_size 3,784,949 downloaded_date 08/15/2018 release_date 11/30/2014 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/BI.CD4+_CD25+_CD127-_Treg_Primary_Cells.H3K27me3.Donor_62.narrowPeak.lifted.bed.gz processed_file_md5 8b8a881dd28e650a2d8f4340eec4d457 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/BI.CD4+_CD25+_CD127-_Treg_Primary_Cells.H3K27me3.Donor_62.narrowPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/BI.CD4+_CD25+_CD127-_Treg_Primary_Cells.H3K27me3.Donor_62.narrowPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/narrowPeak/BI.CD4+_CD25+_CD127-_Treg_Primary_Cells.H3K27me3.Donor_62.narrowPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/narrowpeak/BI.CD4+_CD25+_CD127-_Treg_Primary_Cells.H3K27me3.Donor_62.narrowPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/narrowpeak/ raw_file_md5 3a392b57ba1eecfd49422a1f0527de82 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27me3 peaks track_description version=2015;Original_cell_type=CD4+ CD25+ CD127- Treg Primary Cells;Donor=62;schema=BED3+10;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=CL_0002677;is_hg38_lifted=yes system_category Cardiovascular life_stage Unknown track_name ROADMAP CD4+ CD25+ CD127- Treg ChIP-seq H3K27me3-histone-mark peaks (narrowPeak-lifted) [Histone ChIP-seq peaks]
H3K27me3 • HUES48 NGRMPPI2G7V7VC • ROADMAP25693563 ChIP-seq HUES48 Histone Show metadata Download track Track metadata identifier NGRMPPI2G7V7VC data_source ROADMAP Download track Download number_of_intervals 448,523 bp_covered 582,890,506 output_type peaks genome_build hg38 cell_type HUES48 biosample_type Primary culture biosample_term_id EFO:0007083 tissue_category Embryo encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27me3 assay ChIP-seq file_format bed broadPeak-lifted file_size 14,703,768 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/27/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/BI.HUES48.H3K27me3.Lib_EpiLabSPL_Row_1716.broadPeak.lifted.bed.gz processed_file_md5 3304c06db8775b29ca5bbd0ddf58939c wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/BI.HUES48.H3K27me3.Lib_EpiLabSPL_Row_1716.broadPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/BI.HUES48.H3K27me3.Lib_EpiLabSPL_Row_1716.broadPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/broadPeak/BI.HUES48.H3K27me3.Lib_EpiLabSPL_Row_1716.broadPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/broadpeak/BI.HUES48.H3K27me3.Lib_EpiLabSPL_Row_1716.broadPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/broadpeak/ raw_file_md5 6455be641c24d303503c5069fc214142 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27me3 peaks track_description version=2015;Original_cell_type=HUES48;Donor=Lib_EpiLabSPL_Row_1716;schema=BED3+9;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=EFO:0007083;is_hg38_lifted=yes system_category Embryo life_stage Embryonic track_name ROADMAP HUES48 ChIP-seq H3K27me3-histone-mark peaks (broadPeak-lifted) [Life stage: Embryonic] [Histone ChIP-seq peaks]
H3K27me3 • Neurosphere cultured cell cortex derived NGRMPPMLBWFYVV • ROADMAP25693563 ChIP-seq Neurosphere cultured cell cortex derived Histone Show metadata Download track Track metadata identifier NGRMPPMLBWFYVV data_source ROADMAP Download track Download number_of_intervals 410,406 bp_covered 779,000,688 output_type peaks genome_build hg38 cell_type Neurosphere cultured cell cortex derived biosample_type Stem cell biosample_term_id CL:0000047 tissue_category Brain encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27me3 assay ChIP-seq file_format bed broadPeak-lifted file_size 13,415,881 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/27/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/UCSF-UBC.Neurosphere_Cultured_Cells_Cortex_Derived.H3K27me3.HuFNSC01.broadPeak.lifted.bed.gz processed_file_md5 7a63d650839952ad55fe9cb034e5368b wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/UCSF-UBC.Neurosphere_Cultured_Cells_Cortex_Derived.H3K27me3.HuFNSC01.broadPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/UCSF-UBC.Neurosphere_Cultured_Cells_Cortex_Derived.H3K27me3.HuFNSC01.broadPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/broadPeak/UCSF-UBC.Neurosphere_Cultured_Cells_Cortex_Derived.H3K27me3.HuFNSC01.broadPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/broadpeak/UCSF-UBC.Neurosphere_Cultured_Cells_Cortex_Derived.H3K27me3.HuFNSC01.broadPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/broadpeak/ raw_file_md5 126fc810d87ffbca717465783107a636 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27me3 peaks track_description version=2015;Original_cell_type=Neurosphere Cultured Cells Cortex Derived;Donor=HuFNSC01;schema=BED3+9;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Nervous life_stage Unknown track_name ROADMAP Neurosphere cultured cell cortex derived ChIP-seq H3K27me3-histone-mark peaks (broadPeak-lifted) [Histone ChIP-seq peaks]
H3K27me3 • Keratinocyte NGRMPPMTTDN7N3 • ROADMAP25693563 ChIP-seq Keratinocyte Histone Show metadata Download track Track metadata identifier NGRMPPMTTDN7N3 data_source ROADMAP Download track Download number_of_intervals 18,642 bp_covered 57,747,753 output_type peaks genome_build hg38 cell_type Keratinocyte biosample_type Primary cell biosample_term_id CL:0000312 tissue_category Skin encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27me3 assay ChIP-seq file_format bed gappedPeak-lifted file_size 885,693 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/28/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSF-UBC.Penis_Foreskin_Keratinocyte_Primary_Cells.H3K27me3.skin01.gappedPeak.lifted.bed.gz processed_file_md5 485812362c60238585e41607482a862f wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSF-UBC.Penis_Foreskin_Keratinocyte_Primary_Cells.H3K27me3.skin01.gappedPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSF-UBC.Penis_Foreskin_Keratinocyte_Primary_Cells.H3K27me3.skin01.gappedPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/gappedPeak/UCSF-UBC.Penis_Foreskin_Keratinocyte_Primary_Cells.H3K27me3.skin01.gappedPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/gappedpeak/UCSF-UBC.Penis_Foreskin_Keratinocyte_Primary_Cells.H3K27me3.skin01.gappedPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/gappedpeak/ raw_file_md5 773153fe141407aeb1c82dfb88ba32a4 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27me3 peaks track_description version=2015;Original_cell_type=Penis Foreskin Keratinocyte Primary Cells;Donor=skin01;schema=BED3+15;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Integumentary life_stage Unknown track_name ROADMAP Keratinocyte ChIP-seq H3K27me3-histone-mark peaks (gappedPeak-lifted) [Histone ChIP-seq peaks]
H3K27me3 • Mesenchymal stem cell NGRMPPN47SN7ES • ROADMAP25693563 ChIP-seq Mesenchymal stem cell Histone Show metadata Download track Track metadata identifier NGRMPPN47SN7ES data_source ROADMAP Download track Download number_of_intervals 589,685 bp_covered 523,477,023 output_type peaks genome_build hg38 cell_type Mesenchymal stem cell biosample_type Stem cell biosample_term_id CL:0000134 tissue_category Connective Tissue encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27me3 assay ChIP-seq file_format bed broadPeak-lifted file_size 19,109,372 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/27/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/UCSD.H1_Derived_Mesenchymal_Stem_Cells.H3K27me3.SK439.broadPeak.lifted.bed.gz processed_file_md5 433eec7a2003b19d1b6d6722c41a3dce wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/UCSD.H1_Derived_Mesenchymal_Stem_Cells.H3K27me3.SK439.broadPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/UCSD.H1_Derived_Mesenchymal_Stem_Cells.H3K27me3.SK439.broadPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/broadPeak/UCSD.H1_Derived_Mesenchymal_Stem_Cells.H3K27me3.SK439.broadPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/broadpeak/UCSD.H1_Derived_Mesenchymal_Stem_Cells.H3K27me3.SK439.broadPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/broadpeak/ raw_file_md5 cd96894aaa19ba0e7e3cc331785c1b7c data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27me3 peaks track_description version=2015;Original_cell_type=H1 Derived Mesenchymal Stem Cells;Donor=SK439;schema=BED3+9;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Skeletal life_stage Embryonic track_name ROADMAP Mesenchymal stem cell ChIP-seq H3K27me3-histone-mark peaks (broadPeak-lifted) [Life stage: Embryonic] [Histone ChIP-seq peaks]
H3K27me3 • Liver NGRMPPNQ7VB2DU • ROADMAP25693563 ChIP-seq Liver Histone Show metadata Download track Track metadata identifier NGRMPPNQ7VB2DU data_source ROADMAP Download track Download number_of_intervals 10,104 bp_covered 32,141,061 output_type peaks genome_build hg38 cell_type Liver biosample_type Primary tissue biosample_term_id UBERON:0002107 tissue_category Liver encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27me3 assay ChIP-seq file_format bed gappedPeak-lifted file_size 472,663 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/28/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.Adult_Liver.H3K27me3.4.gappedPeak.lifted.bed.gz processed_file_md5 f28b86836d7b17c6a2ddff22a9058af4 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.Adult_Liver.H3K27me3.4.gappedPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.Adult_Liver.H3K27me3.4.gappedPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/gappedPeak/BI.Adult_Liver.H3K27me3.4.gappedPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/gappedpeak/BI.Adult_Liver.H3K27me3.4.gappedPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/gappedpeak/ raw_file_md5 75d9991299599598f583f581af093037 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27me3 peaks track_description version=2015;Original_cell_type=Adult Liver;Donor=4;schema=BED3+15;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Digestive life_stage Adult track_name ROADMAP Liver ChIP-seq H3K27me3-histone-mark peaks (gappedPeak-lifted) [Life stage: Adult] [Histone ChIP-seq peaks]
H3K27me3 • Anterior caudate NGRMPPPSSMWW6K • ROADMAP25693563 ChIP-seq Anterior caudate Histone Show metadata Download track Track metadata identifier NGRMPPPSSMWW6K data_source ROADMAP Download track Download number_of_intervals 344,513 bp_covered 737,858,023 output_type peaks genome_build hg38 cell_type Anterior caudate biosample_type Primary tissue biosample_term_id UBERON:0001873 tissue_category Brain encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27me3 assay ChIP-seq file_format bed broadPeak-lifted file_size 11,375,736 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/27/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/BI.Brain_Anterior_Caudate.H3K27me3.149.broadPeak.lifted.bed.gz processed_file_md5 eeffbac7672afd39091d3c64e2ba8029 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/BI.Brain_Anterior_Caudate.H3K27me3.149.broadPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/BI.Brain_Anterior_Caudate.H3K27me3.149.broadPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/broadPeak/BI.Brain_Anterior_Caudate.H3K27me3.149.broadPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/broadpeak/BI.Brain_Anterior_Caudate.H3K27me3.149.broadPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/broadpeak/ raw_file_md5 29941462ec0b79864127a0fad4cca866 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27me3 peaks track_description version=2015;Original_cell_type=Brain Anterior Caudate;Donor=149;schema=BED3+9;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Nervous life_stage Unknown track_name ROADMAP Anterior caudate ChIP-seq H3K27me3-histone-mark peaks (broadPeak-lifted) [Histone ChIP-seq peaks]
H3K27me3 • Liver NGRMPPSEAFXSKS • ROADMAP25693563 ChIP-seq Liver Histone Show metadata Download track Track metadata identifier NGRMPPSEAFXSKS data_source ROADMAP Download track Download number_of_intervals 68,606 bp_covered 318,064,363 output_type peaks genome_build hg38 cell_type Liver biosample_type Primary tissue biosample_term_id UBERON:0002107 tissue_category Liver encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27me3 assay ChIP-seq file_format bed gappedPeak-lifted file_size 3,444,253 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/28/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.Adult_Liver.H3K27me3.STL011.gappedPeak.lifted.bed.gz processed_file_md5 0571ccb3b939141827ef39fe9456667b wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.Adult_Liver.H3K27me3.STL011.gappedPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.Adult_Liver.H3K27me3.STL011.gappedPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/gappedPeak/UCSD.Adult_Liver.H3K27me3.STL011.gappedPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/gappedpeak/UCSD.Adult_Liver.H3K27me3.STL011.gappedPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/gappedpeak/ raw_file_md5 94cf082ab280ea1df0f618b043352f2e data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27me3 peaks track_description version=2015;Original_cell_type=Adult Liver;Donor=STL011;schema=BED3+15;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Digestive life_stage Adult track_name ROADMAP Liver ChIP-seq H3K27me3-histone-mark peaks (gappedPeak-lifted) [Life stage: Adult] [Histone ChIP-seq peaks]
H3K27me3 • Mucosa NGRMPPSX3VQFMU • ROADMAP25693563 ChIP-seq Mucosa Histone Show metadata Download track Track metadata identifier NGRMPPSX3VQFMU data_source ROADMAP Download track Download number_of_intervals 92,936 bp_covered 249,751,135 output_type peaks genome_build hg38 cell_type Mucosa biosample_type Primary tissue biosample_term_id UBERON:0000344 tissue_category Digestive encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27me3 assay ChIP-seq file_format bed gappedPeak-lifted file_size 4,792,735 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/28/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.Colonic_Mucosa.H3K27me3.32.gappedPeak.lifted.bed.gz processed_file_md5 8d3836f4e3489663589566c6a9a3a6ee wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.Colonic_Mucosa.H3K27me3.32.gappedPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.Colonic_Mucosa.H3K27me3.32.gappedPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/gappedPeak/BI.Colonic_Mucosa.H3K27me3.32.gappedPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/gappedpeak/BI.Colonic_Mucosa.H3K27me3.32.gappedPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/gappedpeak/ raw_file_md5 13431d8f284c1af18d8b61f00ed6ca38 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27me3 peaks track_description version=2015;Original_cell_type=Colonic Mucosa;Donor=32;schema=BED3+15;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Digestive life_stage Unknown track_name ROADMAP Mucosa ChIP-seq H3K27me3-histone-mark peaks (gappedPeak-lifted) [Histone ChIP-seq peaks]
H3K27me3 • CD4+ CD25- Th cell NGRMPPV2UPWDRB • ROADMAP25693563 ChIP-seq CD4+ CD25- Th cell Histone Show metadata Download track Track metadata identifier NGRMPPV2UPWDRB data_source ROADMAP Download track Download number_of_intervals 66,204 bp_covered 320,776,209 output_type peaks genome_build hg38 cell_type CD4+ CD25- Th cell biosample_type Primary cell biosample_term_id CL:0000624 tissue_category Blood encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27me3 assay ChIP-seq file_format bed gappedPeak-lifted file_size 3,508,260 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/28/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.CD4+_CD25-_Th_Primary_Cells.H3K27me3.Donor_332.gappedPeak.lifted.bed.gz processed_file_md5 7b5fd59d0b790485b08c4b6ebe779afa wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.CD4+_CD25-_Th_Primary_Cells.H3K27me3.Donor_332.gappedPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.CD4+_CD25-_Th_Primary_Cells.H3K27me3.Donor_332.gappedPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/gappedPeak/BI.CD4+_CD25-_Th_Primary_Cells.H3K27me3.Donor_332.gappedPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/gappedpeak/BI.CD4+_CD25-_Th_Primary_Cells.H3K27me3.Donor_332.gappedPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/gappedpeak/ raw_file_md5 ed9651996f6ae4d519f08ae2a64c06ea data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27me3 peaks track_description version=2015;Original_cell_type=CD4+ CD25- Th Primary Cells;Donor=332;schema=BED3+15;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Cardiovascular life_stage Unknown track_name ROADMAP CD4+ CD25- Th cell ChIP-seq H3K27me3-histone-mark peaks (gappedPeak-lifted) [Histone ChIP-seq peaks]
H3K27me3 • CD4+ naive NGRMPPW2B7OYOI • ROADMAP25693563 ChIP-seq CD4+ naive Histone Show metadata Download track Track metadata identifier NGRMPPW2B7OYOI data_source ROADMAP Download track Download number_of_intervals 23,307 bp_covered 8,247,298 output_type peaks genome_build hg38 cell_type CD4+ naive biosample_type Primary cell biosample_term_id CL:0000895 tissue_category Blood encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27me3 assay ChIP-seq file_format bed narrowPeak-lifted file_size 635,838 downloaded_date 08/15/2018 release_date 11/30/2014 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/BI.CD4_Naive_Primary_Cells.H3K27me3.Donor_101_8_pooled_leukopaks_Jan_20_2011.narrowPeak.lifted.bed.gz processed_file_md5 051639f12e5f8b1e22300a426ecdd292 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/BI.CD4_Naive_Primary_Cells.H3K27me3.Donor_101_8_pooled_leukopaks_Jan_20_2011.narrowPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/BI.CD4_Naive_Primary_Cells.H3K27me3.Donor_101_8_pooled_leukopaks_Jan_20_2011.narrowPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/narrowPeak/BI.CD4_Naive_Primary_Cells.H3K27me3.Donor_101_8_pooled_leukopaks_Jan_20_2011.narrowPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/narrowpeak/BI.CD4_Naive_Primary_Cells.H3K27me3.Donor_101_8_pooled_leukopaks_Jan_20_2011.narrowPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/narrowpeak/ raw_file_md5 c7901100c101a40bf51b9261c8f58c45 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27me3 peaks track_description version=2015;Original_cell_type=CD4 Naive Primary Cells;Donor=101_8_pooled_leukopaks_Jan_20_2011;schema=BED3+10;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=UBERON_0010393;is_hg38_lifted=yes system_category Cardiovascular life_stage Unknown track_name ROADMAP CD4+ naive ChIP-seq H3K27me3-histone-mark peaks (narrowPeak-lifted) [Histone ChIP-seq peaks]
H3K27me3 • CD4+ naive NGRMPPZMOCHPGE • ROADMAP25693563 ChIP-seq CD4+ naive Histone Show metadata Download track Track metadata identifier NGRMPPZMOCHPGE data_source ROADMAP Download track Download number_of_intervals 36,007 bp_covered 173,117,322 output_type peaks genome_build hg38 cell_type CD4+ naive biosample_type Primary cell biosample_term_id CL:0000895 tissue_category Blood encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27me3 assay ChIP-seq file_format bed gappedPeak-lifted file_size 1,792,795 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/28/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.CD4_Naive_Primary_Cells.H3K27me3.Donor_101_8_pooled_leukopaks_Jan_20_2011.gappedPeak.lifted.bed.gz processed_file_md5 a5748e447fafd83ae323e7e8d4e65925 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.CD4_Naive_Primary_Cells.H3K27me3.Donor_101_8_pooled_leukopaks_Jan_20_2011.gappedPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.CD4_Naive_Primary_Cells.H3K27me3.Donor_101_8_pooled_leukopaks_Jan_20_2011.gappedPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/gappedPeak/BI.CD4_Naive_Primary_Cells.H3K27me3.Donor_101_8_pooled_leukopaks_Jan_20_2011.gappedPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/gappedpeak/BI.CD4_Naive_Primary_Cells.H3K27me3.Donor_101_8_pooled_leukopaks_Jan_20_2011.gappedPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/gappedpeak/ raw_file_md5 480052e2dbaa336354552d159c539f41 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27me3 peaks track_description version=2015;Original_cell_type=CD4 Naive Primary Cells;Donor=101_8_pooled_leukopaks_Jan_20_2011;schema=BED3+15;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=UBERON_0010393;is_hg38_lifted=yes system_category Cardiovascular life_stage Unknown track_name ROADMAP CD4+ naive ChIP-seq H3K27me3-histone-mark peaks (gappedPeak-lifted) [Histone ChIP-seq peaks]
H3K27me3 • CD4+ CD25- CD45RA+ naive T cell NGRMPQ3BBFV3KS • ROADMAP25693563 ChIP-seq CD4+ CD25- CD45RA+ naive T cell Histone Show metadata Download track Track metadata identifier NGRMPQ3BBFV3KS data_source ROADMAP Download track Download number_of_intervals 479,165 bp_covered 988,339,511 output_type peaks genome_build hg38 cell_type CD4+ CD25- CD45RA+ naive T cell biosample_type Primary cell biosample_term_id CL:0000895 tissue_category Blood encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27me3 assay ChIP-seq file_format bed broadPeak-lifted file_size 15,350,206 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/27/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/BI.CD4+_CD25-_CD45RA+_Naive_Primary_Cells.H3K27me3.Donor_62.broadPeak.lifted.bed.gz processed_file_md5 38096d741d670a166d988be26895aa10 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/BI.CD4+_CD25-_CD45RA+_Naive_Primary_Cells.H3K27me3.Donor_62.broadPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/BI.CD4+_CD25-_CD45RA+_Naive_Primary_Cells.H3K27me3.Donor_62.broadPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/broadPeak/BI.CD4+_CD25-_CD45RA+_Naive_Primary_Cells.H3K27me3.Donor_62.broadPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/broadpeak/BI.CD4+_CD25-_CD45RA+_Naive_Primary_Cells.H3K27me3.Donor_62.broadPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/broadpeak/ raw_file_md5 227f014e0f83fb04b01b8c1b522b0c7d data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27me3 peaks track_description version=2015;Original_cell_type=CD4+ CD25- CD45RA+ Naive Primary Cells;Donor=62;schema=BED3+9;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Cardiovascular life_stage Unknown track_name ROADMAP CD4+ CD25- CD45RA+ naive T cell ChIP-seq H3K27me3-histone-mark peaks (broadPeak-lifted) [Histone ChIP-seq peaks]