H3K27me3 • Mesenchymal stem cell NGRMPW4IEIHATC • ROADMAP25693563 ChIP-seq Mesenchymal stem cell Histone Show metadata Download track Track metadata identifier NGRMPW4IEIHATC data_source ROADMAP Download track Download number_of_intervals 265,734 bp_covered 108,786,234 output_type peaks genome_build hg38 cell_type Mesenchymal stem cell biosample_type Stem cell biosample_term_id CL:0000134 tissue_category Connective Tissue encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27me3 assay ChIP-seq file_format bed narrowPeak-lifted file_size 7,251,862 downloaded_date 08/15/2018 release_date 11/30/2014 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/BI.Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K27me3.60.narrowPeak.lifted.bed.gz processed_file_md5 6ca9f665945fe061fc08586cdfdd900a wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/BI.Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K27me3.60.narrowPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/BI.Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K27me3.60.narrowPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/narrowPeak/BI.Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K27me3.60.narrowPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/narrowpeak/BI.Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K27me3.60.narrowPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/narrowpeak/ raw_file_md5 cc8a8dde9edae89574230cafe56d1320 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27me3 peaks track_description version=2015;Original_cell_type=Bone Marrow Derived Mesenchymal Stem Cell Cultured Cells;Donor=60;schema=BED3+10;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Skeletal life_stage Unknown track_name ROADMAP Mesenchymal stem cell ChIP-seq H3K27me3-histone-mark peaks (narrowPeak-lifted) [Histone ChIP-seq peaks]
H3K27me3 • H1-hESC NGRMPW7F3Z6C4Y • ROADMAP25693563 ChIP-seq H1-hESC Histone Show metadata Download track Track metadata identifier NGRMPW7F3Z6C4Y data_source ROADMAP Download track Download number_of_intervals 71,491 bp_covered 39,061,297 output_type peaks genome_build hg38 cell_type H1-hESC biosample_type Stem cell biosample_term_id EFO:0003042 tissue_category Embryo encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27me3 assay ChIP-seq file_format bed narrowPeak-lifted file_size 2,046,242 downloaded_date 08/15/2018 release_date 11/30/2014 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/BI.H1.H3K27me3.Solexa-12523.narrowPeak.lifted.bed.gz processed_file_md5 bb803b78af25e33d9a5a6b6309b2fd3b wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/BI.H1.H3K27me3.Solexa-12523.narrowPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/BI.H1.H3K27me3.Solexa-12523.narrowPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/narrowPeak/BI.H1.H3K27me3.Solexa-12523.narrowPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/narrowpeak/BI.H1.H3K27me3.Solexa-12523.narrowPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/narrowpeak/ raw_file_md5 ae02eb755c0d5064ff6b2ad50836c56c data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27me3 peaks track_description version=2015;Original_cell_type=H1;Donor=Solexa-12523;schema=BED3+10;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=EFO:0003042;is_hg38_lifted=yes system_category Embryo life_stage Embryonic track_name ROADMAP H1-hESC ChIP-seq H3K27me3-histone-mark peaks (narrowPeak-lifted) [Life stage: Embryonic] [Histone ChIP-seq peaks]
H3K27me3 • Large intestine NGRMPW7STPDW7M • ROADMAP25693563 ChIP-seq Large intestine Histone Show metadata Download track Track metadata identifier NGRMPW7STPDW7M data_source ROADMAP Download track Download number_of_intervals 259,877 bp_covered 100,309,019 output_type peaks genome_build hg38 cell_type Large intestine biosample_type Primary tissue biosample_term_id UBERON:0000059 tissue_category Digestive encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27me3 assay ChIP-seq file_format bed narrowPeak-lifted file_size 7,039,119 downloaded_date 08/15/2018 release_date 11/30/2014 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/UW.Fetal_Intestine_Large.H3K27me3.H-24595.Histone.DS23306.narrowPeak.lifted.bed.gz processed_file_md5 836bbf7e35fc322c199d8600efd1ea67 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/UW.Fetal_Intestine_Large.H3K27me3.H-24595.Histone.DS23306.narrowPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/UW.Fetal_Intestine_Large.H3K27me3.H-24595.Histone.DS23306.narrowPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/narrowPeak/UW.Fetal_Intestine_Large.H3K27me3.H-24595.Histone.DS23306.narrowPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/narrowpeak/UW.Fetal_Intestine_Large.H3K27me3.H-24595.Histone.DS23306.narrowPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/narrowpeak/ raw_file_md5 77feb94b09e7bbbd240da7158b6e70d0 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27me3 peaks track_description version=2015;Original_cell_type=Fetal Intestine Large;Donor=H-24595.Histone.DS23306;schema=BED3+10;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Digestive life_stage Fetal track_name ROADMAP Large intestine ChIP-seq H3K27me3-histone-mark peaks (narrowPeak-lifted) [Life stage: Fetal] [Histone ChIP-seq peaks]
H3K27me3 • CD19+ NGRMPWALU37VOH • ROADMAP25693563 ChIP-seq CD19+ Histone Show metadata Download track Track metadata identifier NGRMPWALU37VOH data_source ROADMAP Download track Download number_of_intervals 572,024 bp_covered 685,934,905 output_type peaks genome_build hg38 cell_type CD19+ biosample_type Primary cell biosample_term_id NCIT:C129255 tissue_category Blood encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27me3 assay ChIP-seq file_format bed broadPeak-lifted file_size 18,704,190 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/27/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/BI.CD19_Primary_Cells.H3K27me3.CD19_12_22_08.broadPeak.lifted.bed.gz processed_file_md5 16d9bd2d3db02f8568b6c9a081aaebc2 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/BI.CD19_Primary_Cells.H3K27me3.CD19_12_22_08.broadPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/BI.CD19_Primary_Cells.H3K27me3.CD19_12_22_08.broadPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/broadPeak/BI.CD19_Primary_Cells.H3K27me3.CD19_12_22_08.broadPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/broadpeak/BI.CD19_Primary_Cells.H3K27me3.CD19_12_22_08.broadPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/broadpeak/ raw_file_md5 5bc0a12bc9437717be5bdb7f17ee4add data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27me3 peaks track_description version=2015;Original_cell_type=CD19 Primary Cells;Donor=CD19_12_22_08;schema=BED3+9;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Cardiovascular life_stage Unknown track_name ROADMAP CD19+ ChIP-seq H3K27me3-histone-mark peaks (broadPeak-lifted) [Histone ChIP-seq peaks]
H3K27me3 • Aorta NGRMPWESJGXB63 • ROADMAP25693563 ChIP-seq Aorta Histone Show metadata Download track Track metadata identifier NGRMPWESJGXB63 data_source ROADMAP Download track Download number_of_intervals 47,211 bp_covered 8,596,645 output_type peaks genome_build hg38 cell_type Aorta biosample_type Primary tissue biosample_term_id UBERON:0000947 tissue_category Blood Vessel encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27me3 assay ChIP-seq file_format bed narrowPeak-lifted file_size 1,261,461 downloaded_date 08/15/2018 release_date 11/30/2014 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/UCSD.Aorta.H3K27me3.STL003.narrowPeak.lifted.bed.gz processed_file_md5 4a602f9e6573c171dde951766698397e wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/UCSD.Aorta.H3K27me3.STL003.narrowPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/UCSD.Aorta.H3K27me3.STL003.narrowPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/narrowPeak/UCSD.Aorta.H3K27me3.STL003.narrowPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/narrowpeak/UCSD.Aorta.H3K27me3.STL003.narrowPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/narrowpeak/ raw_file_md5 173a1cf890614da5fcab9d2d345b6657 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27me3 peaks track_description version=2015;Original_cell_type=Aorta;Donor=STL003;schema=BED3+10;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Cardiovascular life_stage Unknown track_name ROADMAP Aorta ChIP-seq H3K27me3-histone-mark peaks (narrowPeak-lifted) [Histone ChIP-seq peaks]
H3K27me3 • Keratinocyte NGRMPWFCM2UWTG • ROADMAP25693563 ChIP-seq Keratinocyte Histone Show metadata Download track Track metadata identifier NGRMPWFCM2UWTG data_source ROADMAP Download track Download number_of_intervals 45,712 bp_covered 142,309,620 output_type peaks genome_build hg38 cell_type Keratinocyte biosample_type Primary cell biosample_term_id CL:0000312 tissue_category Skin encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27me3 assay ChIP-seq file_format bed gappedPeak-lifted file_size 2,248,269 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/28/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSF-UBC.Penis_Foreskin_Keratinocyte_Primary_Cells.H3K27me3.skin01.A05937.gappedPeak.lifted.bed.gz processed_file_md5 c86b628c7e482af67b58457fa622ef3f wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSF-UBC.Penis_Foreskin_Keratinocyte_Primary_Cells.H3K27me3.skin01.A05937.gappedPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSF-UBC.Penis_Foreskin_Keratinocyte_Primary_Cells.H3K27me3.skin01.A05937.gappedPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/gappedPeak/UCSF-UBC.Penis_Foreskin_Keratinocyte_Primary_Cells.H3K27me3.skin01.A05937.gappedPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/gappedpeak/UCSF-UBC.Penis_Foreskin_Keratinocyte_Primary_Cells.H3K27me3.skin01.A05937.gappedPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/gappedpeak/ raw_file_md5 05a60e85347848b2dd6b54ed74f1c1a2 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27me3 peaks track_description version=2015;Original_cell_type=Penis Foreskin Keratinocyte Primary Cells;Donor=skin01.A05937;schema=BED3+15;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Integumentary life_stage Unknown track_name ROADMAP Keratinocyte ChIP-seq H3K27me3-histone-mark peaks (gappedPeak-lifted) [Histone ChIP-seq peaks]
H3K27me3 • Mobilized CD34+ NGRMPWKAMPCRQK • ROADMAP25693563 ChIP-seq Mobilized CD34+ Histone Show metadata Download track Track metadata identifier NGRMPWKAMPCRQK data_source ROADMAP Download track Download number_of_intervals 68,976 bp_covered 373,419,753 output_type peaks genome_build hg38 cell_type Mobilized CD34+ biosample_type Primary cell biosample_term_id CL:0000037 tissue_category Blood encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27me3 assay ChIP-seq file_format bed gappedPeak-lifted file_size 4,041,947 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/28/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.Mobilized_CD34_Primary_Cells.H3K27me3.Mobilized_CD34_5_28_09.gappedPeak.lifted.bed.gz processed_file_md5 038e9c352d923aea158be0777814e310 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.Mobilized_CD34_Primary_Cells.H3K27me3.Mobilized_CD34_5_28_09.gappedPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.Mobilized_CD34_Primary_Cells.H3K27me3.Mobilized_CD34_5_28_09.gappedPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/gappedPeak/BI.Mobilized_CD34_Primary_Cells.H3K27me3.Mobilized_CD34_5_28_09.gappedPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/gappedpeak/BI.Mobilized_CD34_Primary_Cells.H3K27me3.Mobilized_CD34_5_28_09.gappedPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/gappedpeak/ raw_file_md5 2dcbfd2796fd3753d1ae46a905af96c5 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27me3 peaks track_description version=2015;Original_cell_type=Mobilized CD34 Primary Cells;Donor=Mobilized_CD34_5_28_09;schema=BED3+15;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Cardiovascular life_stage Unknown track_name ROADMAP Mobilized CD34+ ChIP-seq H3K27me3-histone-mark peaks (gappedPeak-lifted) [Histone ChIP-seq peaks]
H3K27me3 • Substantia nigra NGRMPWLMQCIYYK • ROADMAP25693563 ChIP-seq Substantia nigra Histone Show metadata Download track Track metadata identifier NGRMPWLMQCIYYK data_source ROADMAP Download track Download number_of_intervals 30,753 bp_covered 153,126,348 output_type peaks genome_build hg38 cell_type Substantia nigra biosample_type Primary tissue biosample_term_id UBERON:0002038 tissue_category Brain encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27me3 assay ChIP-seq file_format bed gappedPeak-lifted file_size 1,650,176 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/28/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.Brain_Substantia_Nigra.H3K27me3.149.gappedPeak.lifted.bed.gz processed_file_md5 3419236fdda960beee9e4a153c4c341e wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.Brain_Substantia_Nigra.H3K27me3.149.gappedPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.Brain_Substantia_Nigra.H3K27me3.149.gappedPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/gappedPeak/BI.Brain_Substantia_Nigra.H3K27me3.149.gappedPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/gappedpeak/BI.Brain_Substantia_Nigra.H3K27me3.149.gappedPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/gappedpeak/ raw_file_md5 6b4e685e36330ea195ad2f0136a163f3 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27me3 peaks track_description version=2015;Original_cell_type=Brain Substantia Nigra;Donor=149;schema=BED3+15;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Nervous life_stage Unknown track_name ROADMAP Substantia nigra ChIP-seq H3K27me3-histone-mark peaks (gappedPeak-lifted) [Histone ChIP-seq peaks]
H3K27me3 • iPS-18a NGRMPWNSXCUPEN • ROADMAP25693563 ChIP-seq iPS-18a Histone Show metadata Download track Track metadata identifier NGRMPWNSXCUPEN data_source ROADMAP Download track Download number_of_intervals 20,712 bp_covered 120,183,893 output_type peaks genome_build hg38 cell_type iPS-18a biosample_type Primary culture biosample_term_id EFO:0007105 tissue_category iPSC encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27me3 assay ChIP-seq file_format bed gappedPeak-lifted file_size 1,217,454 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/28/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.iPS-18a.H3K27me3.DNA_Lib_348.gappedPeak.lifted.bed.gz processed_file_md5 0cdd553d160600bf0f471faa41a28d85 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.iPS-18a.H3K27me3.DNA_Lib_348.gappedPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.iPS-18a.H3K27me3.DNA_Lib_348.gappedPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/gappedPeak/BI.iPS-18a.H3K27me3.DNA_Lib_348.gappedPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/gappedpeak/BI.iPS-18a.H3K27me3.DNA_Lib_348.gappedPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/gappedpeak/ raw_file_md5 a18835bbb17a4d4f19b7063fec85d3be data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27me3 peaks track_description version=2015;Original_cell_type=iPS-18a;Donor=DNA_Lib_348;schema=BED3+15;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=EFO:0007105;is_hg38_lifted=yes system_category Stem Cell life_stage Unknown track_name ROADMAP iPS-18a ChIP-seq H3K27me3-histone-mark peaks (gappedPeak-lifted) [Histone ChIP-seq peaks]
H3K27me3 • Lung NGRMPWNYOB64VW • ROADMAP25693563 ChIP-seq Lung Histone Show metadata Download track Track metadata identifier NGRMPWNYOB64VW data_source ROADMAP Download track Download number_of_intervals 139,809 bp_covered 76,052,410 output_type peaks genome_build hg38 cell_type Lung biosample_type Primary tissue biosample_term_id UBERON:0002048 tissue_category Lung encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27me3 assay ChIP-seq file_format bed narrowPeak-lifted file_size 4,061,017 downloaded_date 08/15/2018 release_date 11/30/2014 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/BI.Fetal_Lung.H3K27me3.UW_H22772.narrowPeak.lifted.bed.gz processed_file_md5 35a90379280dc19b1cdee2972b2b6378 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/BI.Fetal_Lung.H3K27me3.UW_H22772.narrowPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/BI.Fetal_Lung.H3K27me3.UW_H22772.narrowPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/narrowPeak/BI.Fetal_Lung.H3K27me3.UW_H22772.narrowPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/narrowpeak/BI.Fetal_Lung.H3K27me3.UW_H22772.narrowPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/narrowpeak/ raw_file_md5 11871bf21eebfaf116da30011cb7cbe8 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27me3 peaks track_description version=2015;Original_cell_type=Fetal Lung;Donor=UW_H22772;schema=BED3+10;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Respiratory life_stage Fetal track_name ROADMAP Lung ChIP-seq H3K27me3-histone-mark peaks (narrowPeak-lifted) [Life stage: Fetal] [Histone ChIP-seq peaks]
H3K27me3 • CD19+ NGRMPWOEZKGTW7 • ROADMAP25693563 ChIP-seq CD19+ Histone Show metadata Download track Track metadata identifier NGRMPWOEZKGTW7 data_source ROADMAP Download track Download number_of_intervals 179,966 bp_covered 35,156,481 output_type peaks genome_build hg38 cell_type CD19+ biosample_type Primary cell biosample_term_id NCIT:C129255 tissue_category Blood encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27me3 assay ChIP-seq file_format bed narrowPeak-lifted file_size 4,573,463 downloaded_date 08/15/2018 release_date 11/30/2014 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/BI.CD19_Primary_Cells.H3K27me3.CD19_6_26_08.narrowPeak.lifted.bed.gz processed_file_md5 968474ef1f519c20faa824d1aaa2da2a wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/BI.CD19_Primary_Cells.H3K27me3.CD19_6_26_08.narrowPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/BI.CD19_Primary_Cells.H3K27me3.CD19_6_26_08.narrowPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/narrowPeak/BI.CD19_Primary_Cells.H3K27me3.CD19_6_26_08.narrowPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/narrowpeak/BI.CD19_Primary_Cells.H3K27me3.CD19_6_26_08.narrowPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/narrowpeak/ raw_file_md5 8f319c984bc5a959ba326585acb7fc50 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27me3 peaks track_description version=2015;Original_cell_type=CD19 Primary Cells;Donor=CD19_6_26_08;schema=BED3+10;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Cardiovascular life_stage Unknown track_name ROADMAP CD19+ ChIP-seq H3K27me3-histone-mark peaks (narrowPeak-lifted) [Histone ChIP-seq peaks]
H3K27me3 • H1-hESC NGRMPWPCUUNAHW • ROADMAP25693563 ChIP-seq H1-hESC Histone Show metadata Download track Track metadata identifier NGRMPWPCUUNAHW data_source ROADMAP Download track Download number_of_intervals 127,296 bp_covered 34,665,829 output_type peaks genome_build hg38 cell_type H1-hESC biosample_type Stem cell biosample_term_id EFO:0003042 tissue_category Embryo encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27me3 assay ChIP-seq file_format bed narrowPeak-lifted file_size 3,709,731 downloaded_date 08/15/2018 release_date 11/30/2014 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/UCSD.H1.H3K27me3.LL241.narrowPeak.lifted.bed.gz processed_file_md5 1f0d027ce2cbf4ce5795843f25221538 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/UCSD.H1.H3K27me3.LL241.narrowPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/UCSD.H1.H3K27me3.LL241.narrowPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/narrowPeak/UCSD.H1.H3K27me3.LL241.narrowPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/narrowpeak/UCSD.H1.H3K27me3.LL241.narrowPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/narrowpeak/ raw_file_md5 bdd07ea26fc613e0568ef421aa98075e data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27me3 peaks track_description version=2015;Original_cell_type=H1;Donor=LL241;schema=BED3+10;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=EFO:0003042;is_hg38_lifted=yes system_category Embryo life_stage Embryonic track_name ROADMAP H1-hESC ChIP-seq H3K27me3-histone-mark peaks (narrowPeak-lifted) [Life stage: Embryonic] [Histone ChIP-seq peaks]
H3K27me3 • Heart NGRMPWQBI7WX7Z • ROADMAP25693563 ChIP-seq Heart Histone Show metadata Download track Track metadata identifier NGRMPWQBI7WX7Z data_source ROADMAP Download track Download number_of_intervals 257,062 bp_covered 225,422,244 output_type peaks genome_build hg38 cell_type Heart biosample_type Primary tissue biosample_term_id NCIT:C12727 tissue_category Heart encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27me3 assay ChIP-seq file_format bed broadPeak-lifted file_size 7,887,979 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/27/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/BI.Fetal_Heart.H3K27me3.UW_H-22727.broadPeak.lifted.bed.gz processed_file_md5 51411ead355b5b499bff5ea490692521 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/BI.Fetal_Heart.H3K27me3.UW_H-22727.broadPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/BI.Fetal_Heart.H3K27me3.UW_H-22727.broadPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/broadPeak/BI.Fetal_Heart.H3K27me3.UW_H-22727.broadPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/broadpeak/BI.Fetal_Heart.H3K27me3.UW_H-22727.broadPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/broadpeak/ raw_file_md5 dc132f3d867f4938044eb78e5c373ef4 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27me3 peaks track_description version=2015;Original_cell_type=Fetal Heart;Donor=UW_H-22727;schema=BED3+9;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Cardiovascular life_stage Fetal track_name ROADMAP Heart ChIP-seq H3K27me3-histone-mark peaks (broadPeak-lifted) [Life stage: Fetal] [Histone ChIP-seq peaks]
H3K27me3 • ES-I3 NGRMPWVKNXIC5F • ROADMAP25693563 ChIP-seq ES-I3 Histone Show metadata Download track Track metadata identifier NGRMPWVKNXIC5F data_source ROADMAP Download track Download number_of_intervals 853,217 bp_covered 877,628,382 output_type peaks genome_build hg38 cell_type ES-I3 biosample_type Stem cell biosample_term_id EFO:0007076 tissue_category Embryo encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27me3 assay ChIP-seq file_format bed broadPeak-lifted file_size 25,921,477 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/27/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/BI.ES-I3.H3K27me3.Solexa-12678.broadPeak.lifted.bed.gz processed_file_md5 6e7b1e77bfbd945de1d4a32423f0dbeb wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/BI.ES-I3.H3K27me3.Solexa-12678.broadPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/BI.ES-I3.H3K27me3.Solexa-12678.broadPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/broadPeak/BI.ES-I3.H3K27me3.Solexa-12678.broadPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/broadpeak/BI.ES-I3.H3K27me3.Solexa-12678.broadPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/broadpeak/ raw_file_md5 ad821875b18f3495fa88604a6b647614 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27me3 peaks track_description version=2015;Original_cell_type=ES-I3;Donor=Solexa-12678;schema=BED3+9;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=EFO:0007076;is_hg38_lifted=yes system_category Embryo life_stage Embryonic track_name ROADMAP ES-I3 ChIP-seq H3K27me3-histone-mark peaks (broadPeak-lifted) [Life stage: Embryonic] [Histone ChIP-seq peaks]
H3K27me3 • Placenta amnion NGRMPWWKK5N43F • ROADMAP25693563 ChIP-seq Placenta amnion Histone Show metadata Download track Track metadata identifier NGRMPWWKK5N43F data_source ROADMAP Download track Download number_of_intervals 34,403 bp_covered 18,041,221 output_type peaks genome_build hg38 cell_type Placenta amnion biosample_type Primary tissue biosample_term_id UBERON:0000305 tissue_category Placenta encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27me3 assay ChIP-seq file_format bed narrowPeak-lifted file_size 962,098 downloaded_date 08/15/2018 release_date 11/30/2014 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/UCSF-UBC.Placenta_Amnion.H3K27me3.CTL02.narrowPeak.lifted.bed.gz processed_file_md5 59d82dbc20e80be1ada74fc7cdc5a46f wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/UCSF-UBC.Placenta_Amnion.H3K27me3.CTL02.narrowPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/UCSF-UBC.Placenta_Amnion.H3K27me3.CTL02.narrowPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/narrowPeak/UCSF-UBC.Placenta_Amnion.H3K27me3.CTL02.narrowPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/narrowpeak/UCSF-UBC.Placenta_Amnion.H3K27me3.CTL02.narrowPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/narrowpeak/ raw_file_md5 aa17d7e76a12caf260284f6f32519240 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27me3 peaks track_description version=2015;Original_cell_type=Placenta Amnion;Donor=CTL02;schema=BED3+10;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Placental life_stage Unknown track_name ROADMAP Placenta amnion ChIP-seq H3K27me3-histone-mark peaks (narrowPeak-lifted) [Histone ChIP-seq peaks]
H3K27me3 • Melanocyte NGRMPWWS6UPXA2 • ROADMAP25693563 ChIP-seq Melanocyte Histone Show metadata Download track Track metadata identifier NGRMPWWS6UPXA2 data_source ROADMAP Download track Download number_of_intervals 47,613 bp_covered 274,777,476 output_type peaks genome_build hg38 cell_type Melanocyte biosample_type Primary cell biosample_term_id CL:0000148 tissue_category Skin encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27me3 assay ChIP-seq file_format bed gappedPeak-lifted file_size 2,804,242 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/28/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSF-UBC.Penis_Foreskin_Melanocyte_Primary_Cells.H3K27me3.skin02.gappedPeak.lifted.bed.gz processed_file_md5 043c267136a059fb5f5416f74a46dd05 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSF-UBC.Penis_Foreskin_Melanocyte_Primary_Cells.H3K27me3.skin02.gappedPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSF-UBC.Penis_Foreskin_Melanocyte_Primary_Cells.H3K27me3.skin02.gappedPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/gappedPeak/UCSF-UBC.Penis_Foreskin_Melanocyte_Primary_Cells.H3K27me3.skin02.gappedPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/gappedpeak/UCSF-UBC.Penis_Foreskin_Melanocyte_Primary_Cells.H3K27me3.skin02.gappedPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/gappedpeak/ raw_file_md5 820a4d179a14720311f89363a3464fbd data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27me3 peaks track_description version=2015;Original_cell_type=Penis foreskin melanocyte Primary Cells;Donor=skin02;schema=BED3+15;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Integumentary life_stage Unknown track_name ROADMAP Melanocyte ChIP-seq H3K27me3-histone-mark peaks (gappedPeak-lifted) [Histone ChIP-seq peaks]
H3K27me3 • IMR-90 NGRMPWWVKQBCMV • ROADMAP25693563 ChIP-seq IMR-90 Histone Show metadata Download track Track metadata identifier NGRMPWWVKQBCMV data_source ROADMAP Download track Download number_of_intervals 301,428 bp_covered 501,932,318 output_type peaks genome_build hg38 cell_type IMR-90 biosample_type Cell line biosample_term_id EFO:0001196 tissue_category Lung encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27me3 assay ChIP-seq file_format bed broadPeak-lifted file_size 10,030,393 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/27/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/UCSD.IMR90.H3K27me3.LL223.broadPeak.lifted.bed.gz processed_file_md5 d06294c199194916335e5b079d928d99 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/UCSD.IMR90.H3K27me3.LL223.broadPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/UCSD.IMR90.H3K27me3.LL223.broadPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/broadPeak/UCSD.IMR90.H3K27me3.LL223.broadPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/broadpeak/UCSD.IMR90.H3K27me3.LL223.broadPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/broadpeak/ raw_file_md5 d059bd4f2f988488bc7c4e8b0505db9f data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27me3 peaks track_description version=2015;Original_cell_type=IMR 90;Donor=LL223;schema=BED3+9;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=EFO:0001196;is_hg38_lifted=yes system_category Respiratory life_stage Unknown track_name ROADMAP IMR-90 ChIP-seq H3K27me3-histone-mark peaks (broadPeak-lifted) [Histone ChIP-seq peaks]
H3K27me3 • Cingulate gyrus NGRMPX2GIWFZ2R • ROADMAP25693563 ChIP-seq Cingulate gyrus Histone Show metadata Download track Track metadata identifier NGRMPX2GIWFZ2R data_source ROADMAP Download track Download number_of_intervals 110,880 bp_covered 47,771,892 output_type peaks genome_build hg38 cell_type Cingulate gyrus biosample_type Primary tissue biosample_term_id UBERON:0002967 tissue_category Brain encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27me3 assay ChIP-seq file_format bed narrowPeak-lifted file_size 3,237,074 downloaded_date 08/15/2018 release_date 11/30/2014 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/BI.Brain_Cingulate_Gyrus.H3K27me3.149.narrowPeak.lifted.bed.gz processed_file_md5 f0c9084439b20219225cec69247f50cf wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/BI.Brain_Cingulate_Gyrus.H3K27me3.149.narrowPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/BI.Brain_Cingulate_Gyrus.H3K27me3.149.narrowPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/narrowPeak/BI.Brain_Cingulate_Gyrus.H3K27me3.149.narrowPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/narrowpeak/BI.Brain_Cingulate_Gyrus.H3K27me3.149.narrowPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/narrowpeak/ raw_file_md5 18359584cd7c2fdf70627e7d108fe6b6 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27me3 peaks track_description version=2015;Original_cell_type=Brain Cingulate Gyrus;Donor=149;schema=BED3+10;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Nervous life_stage Unknown track_name ROADMAP Cingulate gyrus ChIP-seq H3K27me3-histone-mark peaks (narrowPeak-lifted) [Histone ChIP-seq peaks]
H3K27me3 • Muscle satellite cultured cell NGRMPX7KORYQ6S • ROADMAP25693563 ChIP-seq Muscle satellite cultured cell Histone Show metadata Download track Track metadata identifier NGRMPX7KORYQ6S data_source ROADMAP Download track Download number_of_intervals 56,972 bp_covered 319,585,351 output_type peaks genome_build hg38 cell_type Muscle satellite cultured cell biosample_type Primary culture biosample_term_id CL:0000594 tissue_category Skeletal Muscle encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27me3 assay ChIP-seq file_format bed gappedPeak-lifted file_size 3,508,865 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/28/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.Muscle_Satellite_Cultured_Cells.H3K27me3.hSKM-3.gappedPeak.lifted.bed.gz processed_file_md5 8aee54451b9f98dd368c39ae6f897b71 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.Muscle_Satellite_Cultured_Cells.H3K27me3.hSKM-3.gappedPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.Muscle_Satellite_Cultured_Cells.H3K27me3.hSKM-3.gappedPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/gappedPeak/BI.Muscle_Satellite_Cultured_Cells.H3K27me3.hSKM-3.gappedPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/gappedpeak/BI.Muscle_Satellite_Cultured_Cells.H3K27me3.hSKM-3.gappedPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/gappedpeak/ raw_file_md5 56dda527872b627c5ffea56685a20109 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27me3 peaks track_description version=2015;Original_cell_type=Muscle Satellite Cultured Cells;Donor=hSKM-3;schema=BED3+15;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Muscular life_stage Unknown track_name ROADMAP Muscle satellite cultured cell ChIP-seq H3K27me3-histone-mark peaks (gappedPeak-lifted) [Histone ChIP-seq peaks]
H3K27me3 • Trophoblast NGRMPXBFY3KWVB • ROADMAP25693563 ChIP-seq Trophoblast Histone Show metadata Download track Track metadata identifier NGRMPXBFY3KWVB data_source ROADMAP Download track Download number_of_intervals 1,324,948 bp_covered 1,030,077,147 output_type peaks genome_build hg38 cell_type Trophoblast biosample_type In vitro differentiated cells biosample_term_id UBERON:0000088 tissue_category Embryo encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27me3 assay ChIP-seq file_format bed broadPeak-lifted file_size 39,468,728 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/27/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H3K27me3.SK448.broadPeak.lifted.bed.gz processed_file_md5 cde3465b0202aa1e797adb1700d5f231 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H3K27me3.SK448.broadPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H3K27me3.SK448.broadPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/broadPeak/UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H3K27me3.SK448.broadPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/broadpeak/UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H3K27me3.SK448.broadPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/broadpeak/ raw_file_md5 b84b6f8d46d5866d923ba068825fecfc data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27me3 peaks track_description version=2015;Original_cell_type=H1 BMP4 Derived Trophoblast Cultured Cells;Donor=SK448;schema=BED3+9;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=NTR:0000856;is_hg38_lifted=yes system_category Embryo life_stage Embryonic track_name ROADMAP Trophoblast ChIP-seq H3K27me3-histone-mark peaks (broadPeak-lifted) [Life stage: Embryonic] [Histone ChIP-seq peaks]