CEBPB • H1-hESC NGFTBDJ4L4RL7Z • Factorbook34755879 Motif finding H1-hESC TFBS Show metadata Download track Track metadata identifier NGFTBDJ4L4RL7Z data_source Factorbook Download track Download number_of_intervals 15,579 bp_covered 233,685 output_type transcription factor binding sites all genome_build hg38 cell_type H1-hESC biosample_type Cell line biosample_term_id EFO:0003042 tissue_category Embryo encode_experiment_id ENCSR000EBV biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CEBPB assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 263,494 downloaded_date 07/10/2024 release_date 05/14/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF823KCM_DRTTRYGCAAYMNBN_sorted.bed.gz processed_file_md5 d3e4e3d42d32247d988d682ccc9a08d2 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF823KCM_DRTTRYGCAAYMNBN_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF823KCM_DRTTRYGCAAYMNBN_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF823KCM_DRTTRYGCAAYMNBN.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF823KCM_DRTTRYGCAAYMNBN.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 2df9a437b07076b2b1181a4768c751d8 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens H1;Original_cell_type=H1;Lab=Michael Snyder, Stanford;System=NR;ENCODE_BED_id=ENCFF823KCM;ENCODE_bigBed_id=ENCFF871PTR;PMID=34755879;Motif_sequence=DRTTRYGCAAYMNBN;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0003042;is_hg38_lifted=no system_category Embryo life_stage Unknown track_name Factorbook H1-hESC (repl. 1, 2) Motif finding CEBPB transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000EBV] [TFBS]
CEBPB • HepG2 NGFTBDPFOR2TNZ • Factorbook34755879 Motif finding HepG2 TFBS Show metadata Download track Track metadata identifier NGFTBDPFOR2TNZ data_source Factorbook Download track Download number_of_intervals 12,974 bp_covered 181,636 output_type transcription factor binding sites all genome_build hg38 cell_type HepG2 biosample_type Cell line biosample_term_id EFO:0001187 tissue_category Liver encode_experiment_id ENCSR000BQI biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CEBPB assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 207,514 downloaded_date 07/10/2024 release_date 02/29/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF301CNM_RNDRTTGYGCAAYM_sorted.bed.gz processed_file_md5 4f8b8ce4578bbe09c10e7aa799239a6e wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF301CNM_RNDRTTGYGCAAYM_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF301CNM_RNDRTTGYGCAAYM_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF301CNM_RNDRTTGYGCAAYM.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF301CNM_RNDRTTGYGCAAYM.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 b93f565d2112ee3dba070938c951dadb data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens HepG2;Original_cell_type=HepG2;Lab=Richard Myers, HAIB;System=exocrine system,endocrine system,digestive system;ENCODE_BED_id=ENCFF301CNM;ENCODE_bigBed_id=ENCFF074JWB;PMID=34755879;Motif_sequence=RNDRTTGYGCAAYM;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001187;is_hg38_lifted=no system_category Digestive life_stage Child track_name Factorbook HepG2 (repl. 1, 2) Motif finding CEBPB transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BQI] [Life stage: Child] [TFBS]
CEBPB • HepG2 NGFTBDPQMBQSPG • Factorbook34755879 Motif finding HepG2 TFBS Show metadata Download track Track metadata identifier NGFTBDPQMBQSPG data_source Factorbook Download track Download number_of_intervals 612 bp_covered 12,852 output_type transcription factor binding sites significant genome_build hg38 cell_type HepG2 biosample_type Cell line biosample_term_id EFO:0001187 tissue_category Liver encode_experiment_id ENCSR000EEX biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CEBPB assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 8,850 downloaded_date 07/10/2024 release_date 10/29/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF062USI_GCTCACTGCDACCTCDVYCTC_filtered.bed.gz processed_file_md5 01f0fb21c2c5859c852d2e33f871017d wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF062USI_GCTCACTGCDACCTCDVYCTC_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF062USI_GCTCACTGCDACCTCDVYCTC_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF062USI_GCTCACTGCDACCTCDVYCTC.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF062USI_GCTCACTGCDACCTCDVYCTC.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 1f6974f869037d049afd495ddad06a0d data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens HepG2 treated with 1 mM pyruvate for 6 hours, 1 _M forskolin for 6 hours;Original_cell_type=HepG2;Lab=Michael Snyder, Stanford;System=exocrine system,endocrine system,digestive system;ENCODE_BED_id=ENCFF062USI;ENCODE_bigBed_id=ENCFF874RML;PMID=34755879;Motif_sequence=GCTCACTGCDACCTCDVYCTC;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001187;is_hg38_lifted=no system_category Digestive life_stage Child track_name Factorbook HepG2 (repl. 1, 2) Motif finding CEBPB transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR000EEX] [Life stage: Child] [TFBS]
CEBPB • A549 NGFTBDRSIK47RD • Factorbook34755879 Motif finding A549 TFBS Show metadata Download track Track metadata identifier NGFTBDRSIK47RD data_source Factorbook Download track Download number_of_intervals 12,559 bp_covered 175,826 output_type transcription factor binding sites all genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR299ILN biological_replicate 1, 2, 3 technical_replicate 1_1, 2_1, 3_1 antibody CEBPB assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 194,051 downloaded_date 07/10/2024 release_date 10/27/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF738TVZ_NNDRTTRTGCAATM_sorted.bed.gz processed_file_md5 f06c20202e1aee47cbb84835f99adf1c wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF738TVZ_NNDRTTRTGCAATM_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF738TVZ_NNDRTTRTGCAATM_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF738TVZ_NNDRTTRTGCAATM.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF738TVZ_NNDRTTRTGCAATM.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 ffc0cde5a6b0c02d2639af8fc94e475d data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens A549 treated with 100 nM dexamethasone (agonist) for 1 hour;Original_cell_type=A549;Lab=Tim Reddy, Duke;System=respiratory system;ENCODE_BED_id=ENCFF738TVZ;ENCODE_bigBed_id=ENCFF247GVV;PMID=34755879;Motif_sequence=NNDRTTRTGCAATM;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name Factorbook A549 (repl. 1, 2, 3) Motif finding CEBPB transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR299ILN] [Life stage: Adult] [TFBS]
CEBPB • HepG2 NGFTBE5KUUXO56 • Factorbook34755879 Motif finding HepG2 TFBS Show metadata Download track Track metadata identifier NGFTBE5KUUXO56 data_source Factorbook Download track Download number_of_intervals 2,418 bp_covered 70,122 output_type transcription factor binding sites significant genome_build hg38 cell_type HepG2 biosample_type Cell line biosample_term_id EFO:0001187 tissue_category Liver encode_experiment_id ENCSR000BQI biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CEBPB assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 46,667 downloaded_date 07/10/2024 release_date 02/29/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF301CNM_TTGAGCCCRGGAGGTHRAGGYTGCAGTGA_filtered.bed.gz processed_file_md5 8cef04cce145ffa61a8e8925a692e7d1 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF301CNM_TTGAGCCCRGGAGGTHRAGGYTGCAGTGA_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF301CNM_TTGAGCCCRGGAGGTHRAGGYTGCAGTGA_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF301CNM_TTGAGCCCRGGAGGTHRAGGYTGCAGTGA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF301CNM_TTGAGCCCRGGAGGTHRAGGYTGCAGTGA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 b9fa958ee4a81a4f1fa26aa2c15f005f data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens HepG2;Original_cell_type=HepG2;Lab=Richard Myers, HAIB;System=exocrine system,endocrine system,digestive system;ENCODE_BED_id=ENCFF301CNM;ENCODE_bigBed_id=ENCFF074JWB;PMID=34755879;Motif_sequence=TTGAGCCCRGGAGGTHRAGGYTGCAGTGA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001187;is_hg38_lifted=no system_category Digestive life_stage Child track_name Factorbook HepG2 (repl. 1, 2) Motif finding CEBPB transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR000BQI] [Life stage: Child] [TFBS]
CEBPB • A549 NGFTBEAULWNKFA • Factorbook34755879 Motif finding A549 TFBS Show metadata Download track Track metadata identifier NGFTBEAULWNKFA data_source Factorbook Download track Download number_of_intervals 2,711 bp_covered 21,688 output_type transcription factor binding sites all genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR182OZC biological_replicate 1, 3 technical_replicate 1_1, 3_1 antibody CEBPB assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 29,685 downloaded_date 07/10/2024 release_date 10/27/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF951BHY_TGAMTCAY_sorted.bed.gz processed_file_md5 fdef74aa7dbc2d475c1e177e95071d05 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF951BHY_TGAMTCAY_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF951BHY_TGAMTCAY_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF951BHY_TGAMTCAY.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF951BHY_TGAMTCAY.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 26aa4e636d769974c7828758dae03339 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens A549 treated with 100 nM dexamethasone (agonist) for 2 hours;Original_cell_type=A549;Lab=Tim Reddy, Duke;System=respiratory system;ENCODE_BED_id=ENCFF951BHY;ENCODE_bigBed_id=ENCFF095AKP;PMID=34755879;Motif_sequence=TGAMTCAY;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name Factorbook A549 (repl. 1, 3) Motif finding CEBPB transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR182OZC] [Life stage: Adult] [TFBS]
CEBPB • HeLa-S3 NGFTBEJ7YUADYO • Factorbook34755879 Motif finding HeLa-S3 TFBS Show metadata Download track Track metadata identifier NGFTBEJ7YUADYO data_source Factorbook Download track Download number_of_intervals 16,148 bp_covered 129,184 output_type transcription factor binding sites all genome_build hg38 cell_type HeLa-S3 biosample_type Cell line biosample_term_id EFO:0002791 tissue_category Female Reproductive encode_experiment_id ENCSR000EDA biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CEBPB assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 163,218 downloaded_date 07/10/2024 release_date 10/29/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF014TJO_TGAGTCAY_sorted.bed.gz processed_file_md5 1d31653e9482d5a6302d8a1429f8e827 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF014TJO_TGAGTCAY_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF014TJO_TGAGTCAY_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF014TJO_TGAGTCAY.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF014TJO_TGAGTCAY.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 d7de7d2c3e3b4835b1b753d93173da04 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens HeLa-S3;Original_cell_type=HeLa-S3;Lab=Michael Snyder, Stanford;System=reproductive system;ENCODE_BED_id=ENCFF014TJO;ENCODE_bigBed_id=ENCFF722WEG;PMID=34755879;Motif_sequence=TGAGTCAY;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002791;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook HeLa-S3 (repl. 1, 2) Motif finding CEBPB transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000EDA] [Life stage: Adult] [TFBS]
CEBPB • HepG2 NGFTBETOVI6JBZ • Factorbook34755879 Motif finding HepG2 TFBS Show metadata Download track Track metadata identifier NGFTBETOVI6JBZ data_source Factorbook Download track Download number_of_intervals 2,975 bp_covered 32,725 output_type transcription factor binding sites all genome_build hg38 cell_type HepG2 biosample_type Cell line biosample_term_id EFO:0001187 tissue_category Liver encode_experiment_id ENCSR000EEX biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CEBPB assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 43,055 downloaded_date 07/10/2024 release_date 10/29/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF062USI_TGTTTGCACAR_sorted.bed.gz processed_file_md5 81904df7c28ef4c2125a2a326af1c405 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF062USI_TGTTTGCACAR_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF062USI_TGTTTGCACAR_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF062USI_TGTTTGCACAR.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF062USI_TGTTTGCACAR.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 ccbac30bc27920d3b78eae3b06053203 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens HepG2 treated with 1 mM pyruvate for 6 hours, 1 _M forskolin for 6 hours;Original_cell_type=HepG2;Lab=Michael Snyder, Stanford;System=exocrine system,endocrine system,digestive system;ENCODE_BED_id=ENCFF062USI;ENCODE_bigBed_id=ENCFF874RML;PMID=34755879;Motif_sequence=TGTTTGCACAR;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001187;is_hg38_lifted=no system_category Digestive life_stage Child track_name Factorbook HepG2 (repl. 1, 2) Motif finding CEBPB transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000EEX] [Life stage: Child] [TFBS]
CEBPB • GM12878 NGFTBEVMFEBGGN • Factorbook34755879 Motif finding GM12878 TFBS Show metadata Download track Track metadata identifier NGFTBEVMFEBGGN data_source Factorbook Download track Download number_of_intervals 58 bp_covered 1,740 output_type transcription factor binding sites significant genome_build hg38 cell_type GM12878 biosample_type Cell line biosample_term_id EFO:0002784 tissue_category Blood encode_experiment_id ENCSR681NOM biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CEBPB assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 1,622 downloaded_date 07/10/2024 release_date 07/07/2014 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF864EON_GAGTTTCAGTTTKGSRWGATGAAAADRKTT_filtered.bed.gz processed_file_md5 ec7a821bb5208224c3b24db516e6edc9 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF864EON_GAGTTTCAGTTTKGSRWGATGAAAADRKTT_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF864EON_GAGTTTCAGTTTKGSRWGATGAAAADRKTT_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF864EON_GAGTTTCAGTTTKGSRWGATGAAAADRKTT.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF864EON_GAGTTTCAGTTTKGSRWGATGAAAADRKTT.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 88e19416b30a6da92a7b8e1f1ce033b2 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens GM12878;Original_cell_type=GM12878;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF864EON;ENCODE_bigBed_id=ENCFF088LCU;PMID=34755879;Motif_sequence=GAGTTTCAGTTTKGSRWGATGAAAADRKTT;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002784;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name Factorbook GM12878 (repl. 1, 2) Motif finding CEBPB transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR681NOM] [TFBS]
CEBPB • A549 NGFTBFYUGJKHFO • Factorbook34755879 Motif finding A549 TFBS Show metadata Download track Track metadata identifier NGFTBFYUGJKHFO data_source Factorbook Download track Download number_of_intervals 11,754 bp_covered 129,294 output_type transcription factor binding sites all genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR853DWE biological_replicate 1, 2, 3 technical_replicate 1_1, 2_1, 3_1 antibody CEBPB assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 148,356 downloaded_date 07/10/2024 release_date 10/27/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF766FPC_DRTTKCMHMAB_sorted.bed.gz processed_file_md5 9a8d3cb776ff9245548011a41b8a255d wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF766FPC_DRTTKCMHMAB_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF766FPC_DRTTKCMHMAB_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF766FPC_DRTTKCMHMAB.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF766FPC_DRTTKCMHMAB.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 7311313b20ade4b9252900f14d016bd6 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens A549 treated with 100 nM dexamethasone (agonist) for 7 hours;Original_cell_type=A549;Lab=Tim Reddy, Duke;System=respiratory system;ENCODE_BED_id=ENCFF766FPC;ENCODE_bigBed_id=ENCFF124IUJ;PMID=34755879;Motif_sequence=DRTTKCMHMAB;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name Factorbook A549 (repl. 1, 2, 3) Motif finding CEBPB transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR853DWE] [Life stage: Adult] [TFBS]
CEBPB • IMR-90 NGFTBGC6WREJEW • Factorbook34755879 Motif finding IMR-90 TFBS Show metadata Download track Track metadata identifier NGFTBGC6WREJEW data_source Factorbook Download track Download number_of_intervals 45,354 bp_covered 634,956 output_type transcription factor binding sites all genome_build hg38 cell_type IMR-90 biosample_type Cell line biosample_term_id EFO:0001196 tissue_category Lung encode_experiment_id ENCSR000EFM biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CEBPB assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 731,585 downloaded_date 07/10/2024 release_date 05/14/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF786CKM_KATTGCRYAAYHNH_sorted.bed.gz processed_file_md5 fe96a4e862e9905e7fd8aa41ed1cdcdf wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF786CKM_KATTGCRYAAYHNH_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF786CKM_KATTGCRYAAYHNH_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF786CKM_KATTGCRYAAYHNH.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF786CKM_KATTGCRYAAYHNH.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 8f64c5493dc0aef11b936d0ef4d536e7 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens IMR-90;Original_cell_type=IMR-90;Lab=Michael Snyder, Stanford;System=respiratory system;ENCODE_BED_id=ENCFF786CKM;ENCODE_bigBed_id=ENCFF468UGY;PMID=34755879;Motif_sequence=KATTGCRYAAYHNH;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001196;is_hg38_lifted=no system_category Respiratory life_stage Embryonic track_name Factorbook IMR-90 (repl. 1, 2) Motif finding CEBPB transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000EFM] [Life stage: Embryonic] [TFBS]
CEBPB • K562 NGFTBGJ2FQ3YLI • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBGJ2FQ3YLI data_source Factorbook Download track Download number_of_intervals 660 bp_covered 19,140 output_type transcription factor binding sites significant genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR000EHE biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CEBPB assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 13,368 downloaded_date 07/10/2024 release_date 10/29/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF882ARK_TACARTTCADTGGTWTTWARYAYAKTCAC_filtered.bed.gz processed_file_md5 817c59b162afe2dfa2f78f9df8dc7aad wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF882ARK_TACARTTCADTGGTWTTWARYAYAKTCAC_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF882ARK_TACARTTCADTGGTWTTWARYAYAKTCAC_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF882ARK_TACARTTCADTGGTWTTWARYAYAKTCAC.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF882ARK_TACARTTCADTGGTWTTWARYAYAKTCAC.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 2b8a4836f5b851c776aae5bbffab79af data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF882ARK;ENCODE_bigBed_id=ENCFF189VBN;PMID=34755879;Motif_sequence=TACARTTCADTGGTWTTWARYAYAKTCAC;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding CEBPB transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR000EHE] [Life stage: Adult] [TFBS]
CEBPB • IMR-90 NGFTBHH752FNWY • Factorbook34755879 Motif finding IMR-90 TFBS Show metadata Download track Track metadata identifier NGFTBHH752FNWY data_source Factorbook Download track Download number_of_intervals 16,374 bp_covered 130,992 output_type transcription factor binding sites all genome_build hg38 cell_type IMR-90 biosample_type Cell line biosample_term_id EFO:0001196 tissue_category Lung encode_experiment_id ENCSR000EFM biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CEBPB assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 165,307 downloaded_date 07/10/2024 release_date 05/14/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF786CKM_VTGACTCA_sorted.bed.gz processed_file_md5 4c29300f7171c07a4f29789fbca4879d wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF786CKM_VTGACTCA_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF786CKM_VTGACTCA_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF786CKM_VTGACTCA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF786CKM_VTGACTCA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 74166689ab9596c9567e05e6c859bbc3 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens IMR-90;Original_cell_type=IMR-90;Lab=Michael Snyder, Stanford;System=respiratory system;ENCODE_BED_id=ENCFF786CKM;ENCODE_bigBed_id=ENCFF468UGY;PMID=34755879;Motif_sequence=VTGACTCA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001196;is_hg38_lifted=no system_category Respiratory life_stage Embryonic track_name Factorbook IMR-90 (repl. 1, 2) Motif finding CEBPB transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000EFM] [Life stage: Embryonic] [TFBS]
CEBPB • K562 NGFTBITQA7PZ2P • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBITQA7PZ2P data_source Factorbook Download track Download number_of_intervals 36,063 bp_covered 540,945 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR000EHE biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CEBPB assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 575,525 downloaded_date 07/10/2024 release_date 10/29/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF882ARK_VNKRTTGCRYMAYHB_sorted.bed.gz processed_file_md5 3484d6dfa8c4e474c0e327924385eb50 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF882ARK_VNKRTTGCRYMAYHB_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF882ARK_VNKRTTGCRYMAYHB_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF882ARK_VNKRTTGCRYMAYHB.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF882ARK_VNKRTTGCRYMAYHB.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 1a10ca5619c7fbecae7b511a3087b4d8 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF882ARK;ENCODE_bigBed_id=ENCFF189VBN;PMID=34755879;Motif_sequence=VNKRTTGCRYMAYHB;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding CEBPB transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000EHE] [Life stage: Adult] [TFBS]
CEBPB • A549 NGFTBKBWKVBVUL • Factorbook34755879 Motif finding A549 TFBS Show metadata Download track Track metadata identifier NGFTBKBWKVBVUL data_source Factorbook Download track Download number_of_intervals 5,391 bp_covered 43,128 output_type transcription factor binding sites all genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR701TCU biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CEBPB assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 54,001 downloaded_date 07/10/2024 release_date 10/27/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF155LGO_TTKCMHMA_sorted.bed.gz processed_file_md5 225936f529a61328be08ae238b1a149c wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF155LGO_TTKCMHMA_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF155LGO_TTKCMHMA_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF155LGO_TTKCMHMA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF155LGO_TTKCMHMA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 56797bfc7a4f347220379b42c9c7eeac data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens A549;Original_cell_type=A549;Lab=Tim Reddy, Duke;System=respiratory system;ENCODE_BED_id=ENCFF155LGO;ENCODE_bigBed_id=ENCFF797MXZ;PMID=34755879;Motif_sequence=TTKCMHMA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name Factorbook A549 (repl. 1, 2) Motif finding CEBPB transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR701TCU] [Life stage: Adult] [TFBS]
CEBPB • A549 NGFTBKE4RC4EA7 • Factorbook34755879 Motif finding A549 TFBS Show metadata Download track Track metadata identifier NGFTBKE4RC4EA7 data_source Factorbook Download track Download number_of_intervals 12,505 bp_covered 137,555 output_type transcription factor binding sites all genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR853DWE biological_replicate 1, 2, 3 technical_replicate 1_1, 2_1, 3_1 antibody CEBPB assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 160,680 downloaded_date 07/10/2024 release_date 10/27/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF766FPC_KATTGCAHAAY_sorted.bed.gz processed_file_md5 24ca3292d079e1e4d06c0404dc84f555 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF766FPC_KATTGCAHAAY_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF766FPC_KATTGCAHAAY_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF766FPC_KATTGCAHAAY.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF766FPC_KATTGCAHAAY.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 670bd25ee4721c41dca5734f7b923619 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens A549 treated with 100 nM dexamethasone (agonist) for 7 hours;Original_cell_type=A549;Lab=Tim Reddy, Duke;System=respiratory system;ENCODE_BED_id=ENCFF766FPC;ENCODE_bigBed_id=ENCFF124IUJ;PMID=34755879;Motif_sequence=KATTGCAHAAY;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name Factorbook A549 (repl. 1, 2, 3) Motif finding CEBPB transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR853DWE] [Life stage: Adult] [TFBS]
CEBPB • A549 NGFTBKESR373FX • Factorbook34755879 Motif finding A549 TFBS Show metadata Download track Track metadata identifier NGFTBKESR373FX data_source Factorbook Download track Download number_of_intervals 6,640 bp_covered 53,120 output_type transcription factor binding sites all genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR216GEB biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CEBPB assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 66,540 downloaded_date 07/10/2024 release_date 10/27/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF073TFX_TGWGWMAB_sorted.bed.gz processed_file_md5 afcf81c44bb97142da545734aee707e5 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF073TFX_TGWGWMAB_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF073TFX_TGWGWMAB_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF073TFX_TGWGWMAB.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF073TFX_TGWGWMAB.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 0830a6a1374f81e228c1bd7318925697 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens A549 treated with 100 nM dexamethasone (agonist) for 3 hours;Original_cell_type=A549;Lab=Tim Reddy, Duke;System=respiratory system;ENCODE_BED_id=ENCFF073TFX;ENCODE_bigBed_id=ENCFF302MRQ;PMID=34755879;Motif_sequence=TGWGWMAB;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name Factorbook A549 (repl. 1, 2) Motif finding CEBPB transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR216GEB] [Life stage: Adult] [TFBS]
CEBPB • GM12878 NGFTBL76OFZEMY • Factorbook34755879 Motif finding GM12878 TFBS Show metadata Download track Track metadata identifier NGFTBL76OFZEMY data_source Factorbook Download track Download number_of_intervals 3,505 bp_covered 38,555 output_type transcription factor binding sites all genome_build hg38 cell_type GM12878 biosample_type Cell line biosample_term_id EFO:0002784 tissue_category Blood encode_experiment_id ENCSR000BRX biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CEBPB assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 46,066 downloaded_date 07/10/2024 release_date 09/10/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF955YFB_BTTTCASTTYY_sorted.bed.gz processed_file_md5 9e569b8acd8d39734c728f30b3a93782 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF955YFB_BTTTCASTTYY_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF955YFB_BTTTCASTTYY_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF955YFB_BTTTCASTTYY.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF955YFB_BTTTCASTTYY.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 06a5470edcb120a90b1d59452c3bf72d data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens GM12878;Original_cell_type=GM12878;Lab=Richard Myers, HAIB;System=immune system;ENCODE_BED_id=ENCFF955YFB;ENCODE_bigBed_id=ENCFF942VJF;PMID=34755879;Motif_sequence=BTTTCASTTYY;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002784;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name Factorbook GM12878 (repl. 1, 2) Motif finding CEBPB transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BRX] [TFBS]
CEBPB • A549 NGFTBLFGU3YFQ4 • Factorbook34755879 Motif finding A549 TFBS Show metadata Download track Track metadata identifier NGFTBLFGU3YFQ4 data_source Factorbook Download track Download number_of_intervals 5,552 bp_covered 55,520 output_type transcription factor binding sites all genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR190VMK biological_replicate 1, 2, 3 technical_replicate 1_1, 2_1, 3_1 antibody CEBPB assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 68,468 downloaded_date 07/10/2024 release_date 10/27/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF462AJX_TGTTTGCACA_sorted.bed.gz processed_file_md5 16e4affe5c2cdf5431709e4455e12730 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF462AJX_TGTTTGCACA_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF462AJX_TGTTTGCACA_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF462AJX_TGTTTGCACA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF462AJX_TGTTTGCACA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 e6d35435ba8e6bc441bee6008bd28cfa data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens A549 treated with 100 nM dexamethasone (agonist) for 10 hours;Original_cell_type=A549;Lab=Tim Reddy, Duke;System=respiratory system;ENCODE_BED_id=ENCFF462AJX;ENCODE_bigBed_id=ENCFF533KMU;PMID=34755879;Motif_sequence=TGTTTGCACA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name Factorbook A549 (repl. 1, 2, 3) Motif finding CEBPB transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR190VMK] [Life stage: Adult] [TFBS]
CEBPB • A549 NGFTBLU44E7DZO • Factorbook34755879 Motif finding A549 TFBS Show metadata Download track Track metadata identifier NGFTBLU44E7DZO data_source Factorbook Download track Download number_of_intervals 18,371 bp_covered 202,081 output_type transcription factor binding sites all genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR375BUB biological_replicate 2, 3 technical_replicate 2_1, 3_1 antibody CEBPB assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 245,346 downloaded_date 07/10/2024 release_date 10/27/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF202LMH_RTTRTGCAATM_sorted.bed.gz processed_file_md5 64271cd6d2e8bf15e117fb5490ddd9fe wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF202LMH_RTTRTGCAATM_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF202LMH_RTTRTGCAATM_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF202LMH_RTTRTGCAATM.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF202LMH_RTTRTGCAATM.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 c73cec87d1e8404e79696541a3282a81 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens A549 treated with 100 nM dexamethasone (agonist) for 6 hours;Original_cell_type=A549;Lab=Tim Reddy, Duke;System=respiratory system;ENCODE_BED_id=ENCFF202LMH;ENCODE_bigBed_id=ENCFF727YHN;PMID=34755879;Motif_sequence=RTTRTGCAATM;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name Factorbook A549 (repl. 2, 3) Motif finding CEBPB transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR375BUB] [Life stage: Adult] [TFBS]