CEBPB • A549 NGFTBMRI2ZJWJT • Factorbook34755879 Motif finding A549 TFBS Show metadata Download track Track metadata identifier NGFTBMRI2ZJWJT data_source Factorbook Download track Download number_of_intervals 7,406 bp_covered 59,248 output_type transcription factor binding sites all genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR000DYI biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CEBPB assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 76,750 downloaded_date 07/10/2024 release_date 05/14/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF064WDQ_ATGACTCA_sorted.bed.gz processed_file_md5 d856576904a95bc979b9a271fac428ca wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF064WDQ_ATGACTCA_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF064WDQ_ATGACTCA_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF064WDQ_ATGACTCA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF064WDQ_ATGACTCA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 3e1e47e2445134a9c28755dd9f2761fe data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens A549;Original_cell_type=A549;Lab=Michael Snyder, Stanford;System=respiratory system;ENCODE_BED_id=ENCFF064WDQ;ENCODE_bigBed_id=ENCFF235AIY;PMID=34755879;Motif_sequence=ATGACTCA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name Factorbook A549 (repl. 1, 2) Motif finding CEBPB transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000DYI] [Life stage: Adult] [TFBS]
CEBPB • A549 NGFTBNEHUWHYGC • Factorbook34755879 Motif finding A549 TFBS Show metadata Download track Track metadata identifier NGFTBNEHUWHYGC data_source Factorbook Download track Download number_of_intervals 12,426 bp_covered 186,390 output_type transcription factor binding sites all genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR701TCU biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CEBPB assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 208,206 downloaded_date 07/10/2024 release_date 10/27/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF155LGO_NNDRTTGTGCAAYMN_sorted.bed.gz processed_file_md5 2c837612fd46505b9d84252026aacc2d wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF155LGO_NNDRTTGTGCAAYMN_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF155LGO_NNDRTTGTGCAAYMN_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF155LGO_NNDRTTGTGCAAYMN.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF155LGO_NNDRTTGTGCAAYMN.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 9248e6a9b8815e80920140b7e32775d2 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens A549;Original_cell_type=A549;Lab=Tim Reddy, Duke;System=respiratory system;ENCODE_BED_id=ENCFF155LGO;ENCODE_bigBed_id=ENCFF797MXZ;PMID=34755879;Motif_sequence=NNDRTTGTGCAAYMN;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name Factorbook A549 (repl. 1, 2) Motif finding CEBPB transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR701TCU] [Life stage: Adult] [TFBS]
CEBPB • A549 NGFTBNFXSIPCJH • Factorbook34755879 Motif finding A549 TFBS Show metadata Download track Track metadata identifier NGFTBNFXSIPCJH data_source Factorbook Download track Download number_of_intervals 32,994 bp_covered 461,916 output_type transcription factor binding sites all genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR000DYI biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CEBPB assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 530,387 downloaded_date 07/10/2024 release_date 05/14/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF064WDQ_KRTTGCRYMAYHNN_sorted.bed.gz processed_file_md5 7b0f2e2ace6914b5279bd3102a56802a wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF064WDQ_KRTTGCRYMAYHNN_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF064WDQ_KRTTGCRYMAYHNN_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF064WDQ_KRTTGCRYMAYHNN.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF064WDQ_KRTTGCRYMAYHNN.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 5712789d12d35d2d5fee17739c85d08e data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens A549;Original_cell_type=A549;Lab=Michael Snyder, Stanford;System=respiratory system;ENCODE_BED_id=ENCFF064WDQ;ENCODE_bigBed_id=ENCFF235AIY;PMID=34755879;Motif_sequence=KRTTGCRYMAYHNN;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name Factorbook A549 (repl. 1, 2) Motif finding CEBPB transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000DYI] [Life stage: Adult] [TFBS]
CEBPB • K562 NGFTBNLD5RPH2O • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBNLD5RPH2O data_source Factorbook Download track Download number_of_intervals 41,947 bp_covered 587,258 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR416QLJ biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CEBPB assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 584,467 downloaded_date 07/10/2024 release_date 01/14/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF712ZNR_BRTTGCRYAAYHNY_sorted.bed.gz processed_file_md5 933bcb0843898dcd7fdc5383a691afb7 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF712ZNR_BRTTGCRYAAYHNY_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF712ZNR_BRTTGCRYAAYHNY_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF712ZNR_BRTTGCRYAAYHNY.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF712ZNR_BRTTGCRYAAYHNY.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 2ee15e2602ed85634fc26d5a2be8c48f data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562 stably expressing CEBPB;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF712ZNR;ENCODE_bigBed_id=ENCFF584CTB;PMID=34755879;Motif_sequence=BRTTGCRYAAYHNY;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding CEBPB transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR416QLJ] [Life stage: Adult] [TFBS]
CEBPB • HepG2 NGFTBNP7CQKA6P • Factorbook34755879 Motif finding HepG2 TFBS Show metadata Download track Track metadata identifier NGFTBNP7CQKA6P data_source Factorbook Download track Download number_of_intervals 8,270 bp_covered 90,970 output_type transcription factor binding sites all genome_build hg38 cell_type HepG2 biosample_type Cell line biosample_term_id EFO:0001187 tissue_category Liver encode_experiment_id ENCSR000EEX biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CEBPB assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 116,605 downloaded_date 07/10/2024 release_date 10/29/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF062USI_VTTDCHYMABH_sorted.bed.gz processed_file_md5 9ce3f3f56fdbb2087d60d34a8a72e824 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF062USI_VTTDCHYMABH_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF062USI_VTTDCHYMABH_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF062USI_VTTDCHYMABH.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF062USI_VTTDCHYMABH.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 62876783e1612b28af8cf4441b6e5c16 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens HepG2 treated with 1 mM pyruvate for 6 hours, 1 _M forskolin for 6 hours;Original_cell_type=HepG2;Lab=Michael Snyder, Stanford;System=exocrine system,endocrine system,digestive system;ENCODE_BED_id=ENCFF062USI;ENCODE_bigBed_id=ENCFF874RML;PMID=34755879;Motif_sequence=VTTDCHYMABH;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001187;is_hg38_lifted=no system_category Digestive life_stage Child track_name Factorbook HepG2 (repl. 1, 2) Motif finding CEBPB transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000EEX] [Life stage: Child] [TFBS]
CEBPB • GM12878 NGFTBNWUVKUXYP • Factorbook34755879 Motif finding GM12878 TFBS Show metadata Download track Track metadata identifier NGFTBNWUVKUXYP data_source Factorbook Download track Download number_of_intervals 654 bp_covered 7,194 output_type transcription factor binding sites all genome_build hg38 cell_type GM12878 biosample_type Cell line biosample_term_id EFO:0002784 tissue_category Blood encode_experiment_id ENCSR000BRX biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CEBPB assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 9,519 downloaded_date 07/10/2024 release_date 09/10/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF955YFB_RTTGCRYAAYH_sorted.bed.gz processed_file_md5 c3f1c55c6f4b004f34a2dc3e32ed99c8 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF955YFB_RTTGCRYAAYH_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF955YFB_RTTGCRYAAYH_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF955YFB_RTTGCRYAAYH.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF955YFB_RTTGCRYAAYH.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 8b5de96e69850ccf5cc664726b1405ee data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens GM12878;Original_cell_type=GM12878;Lab=Richard Myers, HAIB;System=immune system;ENCODE_BED_id=ENCFF955YFB;ENCODE_bigBed_id=ENCFF942VJF;PMID=34755879;Motif_sequence=RTTGCRYAAYH;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002784;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name Factorbook GM12878 (repl. 1, 2) Motif finding CEBPB transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BRX] [TFBS]
CEBPB • K562 NGFTBO44FIC7JD • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBO44FIC7JD data_source Factorbook Download track Download number_of_intervals 6,523 bp_covered 52,184 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR000BRQ biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CEBPB assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 59,922 downloaded_date 07/10/2024 release_date 02/29/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF022KBK_TGAGTCAB_sorted.bed.gz processed_file_md5 c93ccb6c81d41849a112c3a75f313097 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF022KBK_TGAGTCAB_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF022KBK_TGAGTCAB_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF022KBK_TGAGTCAB.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF022KBK_TGAGTCAB.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 cb3f885945ffa0d190cc7b79e3cf6dac data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Richard Myers, HAIB;System=immune system;ENCODE_BED_id=ENCFF022KBK;ENCODE_bigBed_id=ENCFF194QGF;PMID=34755879;Motif_sequence=TGAGTCAB;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding CEBPB transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BRQ] [Life stage: Adult] [TFBS]
CEBPB • A549 NGFTBOMNAD5QYS • Factorbook34755879 Motif finding A549 TFBS Show metadata Download track Track metadata identifier NGFTBOMNAD5QYS data_source Factorbook Download track Download number_of_intervals 8,005 bp_covered 88,055 output_type transcription factor binding sites all genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR474DCX biological_replicate 1, 2, 3 technical_replicate 1_1, 2_1, 3_1 antibody CEBPB assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 108,220 downloaded_date 07/10/2024 release_date 10/27/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF796MCF_VTKDKGMAAYM_sorted.bed.gz processed_file_md5 f8df0d8fa22855f74308b700c1753bdd wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF796MCF_VTKDKGMAAYM_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF796MCF_VTKDKGMAAYM_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF796MCF_VTKDKGMAAYM.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF796MCF_VTKDKGMAAYM.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 b81dffeb8e1cd9c72b06c2b96787b711 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens A549 treated with 100 nM dexamethasone (agonist) for 8 hours;Original_cell_type=A549;Lab=Tim Reddy, Duke;System=respiratory system;ENCODE_BED_id=ENCFF796MCF;ENCODE_bigBed_id=ENCFF043TLL;PMID=34755879;Motif_sequence=VTKDKGMAAYM;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name Factorbook A549 (repl. 1, 2, 3) Motif finding CEBPB transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR474DCX] [Life stage: Adult] [TFBS]
CEBPB • A549 NGFTBONFTTLOHR • Factorbook34755879 Motif finding A549 TFBS Show metadata Download track Track metadata identifier NGFTBONFTTLOHR data_source Factorbook Download track Download number_of_intervals 13,267 bp_covered 145,937 output_type transcription factor binding sites all genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR216GEB biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CEBPB assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 181,278 downloaded_date 07/10/2024 release_date 10/27/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF073TFX_DRTTRTGCAAY_sorted.bed.gz processed_file_md5 5af674408070716a20e24adb6e6b0a30 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF073TFX_DRTTRTGCAAY_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF073TFX_DRTTRTGCAAY_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF073TFX_DRTTRTGCAAY.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF073TFX_DRTTRTGCAAY.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 f8b5ad7b82adb37219f3535da76f4e19 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens A549 treated with 100 nM dexamethasone (agonist) for 3 hours;Original_cell_type=A549;Lab=Tim Reddy, Duke;System=respiratory system;ENCODE_BED_id=ENCFF073TFX;ENCODE_bigBed_id=ENCFF302MRQ;PMID=34755879;Motif_sequence=DRTTRTGCAAY;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name Factorbook A549 (repl. 1, 2) Motif finding CEBPB transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR216GEB] [Life stage: Adult] [TFBS]
CEBPB • K562 NGFTBOV7QHTGFO • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBOV7QHTGFO data_source Factorbook Download track Download number_of_intervals 6,134 bp_covered 177,886 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR000EHE biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CEBPB assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 150,154 downloaded_date 07/10/2024 release_date 10/29/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF882ARK_GATGAAAAWGTTCTGGAAWTRGATRGTGG_sorted.bed.gz processed_file_md5 76f4abbc20c7e472f72debb24dc12986 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF882ARK_GATGAAAAWGTTCTGGAAWTRGATRGTGG_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF882ARK_GATGAAAAWGTTCTGGAAWTRGATRGTGG_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF882ARK_GATGAAAAWGTTCTGGAAWTRGATRGTGG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF882ARK_GATGAAAAWGTTCTGGAAWTRGATRGTGG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 d6a8b1eeb55c27ab2a35707604559103 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF882ARK;ENCODE_bigBed_id=ENCFF189VBN;PMID=34755879;Motif_sequence=GATGAAAAWGTTCTGGAAWTRGATRGTGG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding CEBPB transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000EHE] [Life stage: Adult] [TFBS]
CEBPB • HeLa-S3 NGFTBP67BPY2ES • Factorbook34755879 Motif finding HeLa-S3 TFBS Show metadata Download track Track metadata identifier NGFTBP67BPY2ES data_source Factorbook Download track Download number_of_intervals 30,431 bp_covered 426,034 output_type transcription factor binding sites all genome_build hg38 cell_type HeLa-S3 biosample_type Cell line biosample_term_id EFO:0002791 tissue_category Female Reproductive encode_experiment_id ENCSR000EDA biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CEBPB assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 493,340 downloaded_date 07/10/2024 release_date 10/29/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF014TJO_DNDRTTRTGCAAYM_sorted.bed.gz processed_file_md5 cc08473d76eed656d920fd459a9913f2 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF014TJO_DNDRTTRTGCAAYM_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF014TJO_DNDRTTRTGCAAYM_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF014TJO_DNDRTTRTGCAAYM.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF014TJO_DNDRTTRTGCAAYM.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 100bd7eabf1d714a38e6aea06a3f877b data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens HeLa-S3;Original_cell_type=HeLa-S3;Lab=Michael Snyder, Stanford;System=reproductive system;ENCODE_BED_id=ENCFF014TJO;ENCODE_bigBed_id=ENCFF722WEG;PMID=34755879;Motif_sequence=DNDRTTRTGCAAYM;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002791;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook HeLa-S3 (repl. 1, 2) Motif finding CEBPB transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000EDA] [Life stage: Adult] [TFBS]
CEBPB • A549 NGFTBPI7I4FXE3 • Factorbook34755879 Motif finding A549 TFBS Show metadata Download track Track metadata identifier NGFTBPI7I4FXE3 data_source Factorbook Download track Download number_of_intervals 39 bp_covered 819 output_type transcription factor binding sites significant genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR190VMK biological_replicate 1, 2, 3 technical_replicate 1_1, 2_1, 3_1 antibody CEBPB assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 915 downloaded_date 07/10/2024 release_date 10/27/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF462AJX_CTGAGAARWGCATYGTTAGSC_filtered.bed.gz processed_file_md5 aaa49bf1fc32befcd5421a01b320d05c wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF462AJX_CTGAGAARWGCATYGTTAGSC_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF462AJX_CTGAGAARWGCATYGTTAGSC_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF462AJX_CTGAGAARWGCATYGTTAGSC.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF462AJX_CTGAGAARWGCATYGTTAGSC.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 d218447445add26f4a5fd790ce740beb data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens A549 treated with 100 nM dexamethasone (agonist) for 10 hours;Original_cell_type=A549;Lab=Tim Reddy, Duke;System=respiratory system;ENCODE_BED_id=ENCFF462AJX;ENCODE_bigBed_id=ENCFF533KMU;PMID=34755879;Motif_sequence=CTGAGAARWGCATYGTTAGSC;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name Factorbook A549 (repl. 1, 2, 3) Motif finding CEBPB transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR190VMK] [Life stage: Adult] [TFBS]
CEBPB • GM12878 NGFTBPNKSZ2OJO • Factorbook34755879 Motif finding GM12878 TFBS Show metadata Download track Track metadata identifier NGFTBPNKSZ2OJO data_source Factorbook Download track Download number_of_intervals 2,337 bp_covered 25,707 output_type transcription factor binding sites all genome_build hg38 cell_type GM12878 biosample_type Cell line biosample_term_id EFO:0002784 tissue_category Blood encode_experiment_id ENCSR000BRX biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CEBPB assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 30,853 downloaded_date 07/10/2024 release_date 09/10/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF955YFB_TGASTCATYTY_sorted.bed.gz processed_file_md5 e7c051fe3019d0c71373fc27240f7bda wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF955YFB_TGASTCATYTY_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF955YFB_TGASTCATYTY_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF955YFB_TGASTCATYTY.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF955YFB_TGASTCATYTY.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 d9b1731cac19d5e7e15602a3efa0df9f data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens GM12878;Original_cell_type=GM12878;Lab=Richard Myers, HAIB;System=immune system;ENCODE_BED_id=ENCFF955YFB;ENCODE_bigBed_id=ENCFF942VJF;PMID=34755879;Motif_sequence=TGASTCATYTY;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002784;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name Factorbook GM12878 (repl. 1, 2) Motif finding CEBPB transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BRX] [TFBS]
CEBPB • K562 NGFTBPPAP5WEGT • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBPPAP5WEGT data_source Factorbook Download track Download number_of_intervals 2,083 bp_covered 62,490 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR000BRQ biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CEBPB assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 52,038 downloaded_date 07/10/2024 release_date 02/29/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF022KBK_ATCYADTTCYAGAACATTTTCATCAMCCCA_sorted.bed.gz processed_file_md5 20767cba8ff89b65890292df69d9b4ce wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF022KBK_ATCYADTTCYAGAACATTTTCATCAMCCCA_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF022KBK_ATCYADTTCYAGAACATTTTCATCAMCCCA_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF022KBK_ATCYADTTCYAGAACATTTTCATCAMCCCA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF022KBK_ATCYADTTCYAGAACATTTTCATCAMCCCA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 6ff54bbd2fccc232acd339dd55ef8bbf data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Richard Myers, HAIB;System=immune system;ENCODE_BED_id=ENCFF022KBK;ENCODE_bigBed_id=ENCFF194QGF;PMID=34755879;Motif_sequence=ATCYADTTCYAGAACATTTTCATCAMCCCA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding CEBPB transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BRQ] [Life stage: Adult] [TFBS]
CEBPB • GM12878 NGFTBQQF6MCSYX • Factorbook34755879 Motif finding GM12878 TFBS Show metadata Download track Track metadata identifier NGFTBQQF6MCSYX data_source Factorbook Download track Download number_of_intervals 1,896 bp_covered 28,440 output_type transcription factor binding sites all genome_build hg38 cell_type GM12878 biosample_type Cell line biosample_term_id EFO:0002784 tissue_category Blood encode_experiment_id ENCSR681NOM biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CEBPB assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 32,968 downloaded_date 07/10/2024 release_date 07/07/2014 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF864EON_NNNDRTKRYGCAAYM_sorted.bed.gz processed_file_md5 911f05eb6c0039656cf5e19e7f2f0b6e wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF864EON_NNNDRTKRYGCAAYM_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF864EON_NNNDRTKRYGCAAYM_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF864EON_NNNDRTKRYGCAAYM.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF864EON_NNNDRTKRYGCAAYM.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 e3b27961a234085fbf2d5e816592e9be data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens GM12878;Original_cell_type=GM12878;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF864EON;ENCODE_bigBed_id=ENCFF088LCU;PMID=34755879;Motif_sequence=NNNDRTKRYGCAAYM;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002784;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name Factorbook GM12878 (repl. 1, 2) Motif finding CEBPB transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR681NOM] [TFBS]
CEBPB • HepG2 NGFTBQXQ7T5RJV • Factorbook34755879 Motif finding HepG2 TFBS Show metadata Download track Track metadata identifier NGFTBQXQ7T5RJV data_source Factorbook Download track Download number_of_intervals 8,065 bp_covered 241,950 output_type transcription factor binding sites all genome_build hg38 cell_type HepG2 biosample_type Cell line biosample_term_id EFO:0001187 tissue_category Liver encode_experiment_id ENCSR000EEE biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CEBPB assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 181,946 downloaded_date 07/10/2024 release_date 10/29/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF157DSR_GCTCACTGHAGCCTTGACCTCCTGGRCTCA_sorted.bed.gz processed_file_md5 ecc2c74e1666adb489d9e0755e926aac wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF157DSR_GCTCACTGHAGCCTTGACCTCCTGGRCTCA_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF157DSR_GCTCACTGHAGCCTTGACCTCCTGGRCTCA_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF157DSR_GCTCACTGHAGCCTTGACCTCCTGGRCTCA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF157DSR_GCTCACTGHAGCCTTGACCTCCTGGRCTCA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 cbcb1c4f1b55f6d2bf02119e381b85ab data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens HepG2;Original_cell_type=HepG2;Lab=Michael Snyder, Stanford;System=exocrine system,endocrine system,digestive system;ENCODE_BED_id=ENCFF157DSR;ENCODE_bigBed_id=ENCFF536NTI;PMID=34755879;Motif_sequence=GCTCACTGHAGCCTTGACCTCCTGGRCTCA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001187;is_hg38_lifted=no system_category Digestive life_stage Child track_name Factorbook HepG2 (repl. 1, 2) Motif finding CEBPB transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000EEE] [Life stage: Child] [TFBS]
CEBPB • A549 NGFTBRHVS4CESP • Factorbook34755879 Motif finding A549 TFBS Show metadata Download track Track metadata identifier NGFTBRHVS4CESP data_source Factorbook Download track Download number_of_intervals 4,640 bp_covered 51,040 output_type transcription factor binding sites all genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR269IUA biological_replicate 1, 2, 3 technical_replicate 1_1, 2_1, 3_1 antibody CEBPB assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 62,821 downloaded_date 07/10/2024 release_date 10/27/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF470CPW_YTGWGCAAACA_sorted.bed.gz processed_file_md5 f6381cb3e7f91104a2120f6ab602dedd wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF470CPW_YTGWGCAAACA_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF470CPW_YTGWGCAAACA_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF470CPW_YTGWGCAAACA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF470CPW_YTGWGCAAACA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 db0e7ae7c6188a23ed76a156ce2df642 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens A549 treated with 100 nM dexamethasone (agonist) for 12 hours;Original_cell_type=A549;Lab=Tim Reddy, Duke;System=respiratory system;ENCODE_BED_id=ENCFF470CPW;ENCODE_bigBed_id=ENCFF047UJF;PMID=34755879;Motif_sequence=YTGWGCAAACA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name Factorbook A549 (repl. 1, 2, 3) Motif finding CEBPB transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR269IUA] [Life stage: Adult] [TFBS]
CEBPB • A549 NGFTBRQ5HXPA7P • Factorbook34755879 Motif finding A549 TFBS Show metadata Download track Track metadata identifier NGFTBRQ5HXPA7P data_source Factorbook Download track Download number_of_intervals 11,143 bp_covered 122,573 output_type transcription factor binding sites all genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR216GEB biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CEBPB assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 144,573 downloaded_date 07/10/2024 release_date 10/27/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF073TFX_VTKDKGMAATM_sorted.bed.gz processed_file_md5 42dd1349b6c886bfe477237d87477c83 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF073TFX_VTKDKGMAATM_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF073TFX_VTKDKGMAATM_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF073TFX_VTKDKGMAATM.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF073TFX_VTKDKGMAATM.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 78f1919aaad4840fab4e31460124192e data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens A549 treated with 100 nM dexamethasone (agonist) for 3 hours;Original_cell_type=A549;Lab=Tim Reddy, Duke;System=respiratory system;ENCODE_BED_id=ENCFF073TFX;ENCODE_bigBed_id=ENCFF302MRQ;PMID=34755879;Motif_sequence=VTKDKGMAATM;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name Factorbook A549 (repl. 1, 2) Motif finding CEBPB transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR216GEB] [Life stage: Adult] [TFBS]
CEBPB • A549 NGFTBSBUQZWXC2 • Factorbook34755879 Motif finding A549 TFBS Show metadata Download track Track metadata identifier NGFTBSBUQZWXC2 data_source Factorbook Download track Download number_of_intervals 6,611 bp_covered 52,888 output_type transcription factor binding sites all genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR853DWE biological_replicate 1, 2, 3 technical_replicate 1_1, 2_1, 3_1 antibody CEBPB assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 63,197 downloaded_date 07/10/2024 release_date 10/27/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF766FPC_TGAGTCAB_sorted.bed.gz processed_file_md5 5f1806675fd9aeb9896f5c0ccc70b3ca wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF766FPC_TGAGTCAB_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF766FPC_TGAGTCAB_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF766FPC_TGAGTCAB.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF766FPC_TGAGTCAB.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 30a32746b6a41a245f406447fd91ad59 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens A549 treated with 100 nM dexamethasone (agonist) for 7 hours;Original_cell_type=A549;Lab=Tim Reddy, Duke;System=respiratory system;ENCODE_BED_id=ENCFF766FPC;ENCODE_bigBed_id=ENCFF124IUJ;PMID=34755879;Motif_sequence=TGAGTCAB;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name Factorbook A549 (repl. 1, 2, 3) Motif finding CEBPB transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR853DWE] [Life stage: Adult] [TFBS]
CEBPB • HCT116 NGFTBSDG5A7GBF • Factorbook34755879 Motif finding HCT116 TFBS Show metadata Download track Track metadata identifier NGFTBSDG5A7GBF data_source Factorbook Download track Download number_of_intervals 6,852 bp_covered 95,928 output_type transcription factor binding sites all genome_build hg38 cell_type HCT116 biosample_type Cell line biosample_term_id EFO:0002824 tissue_category Digestive encode_experiment_id ENCSR000BSD biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CEBPB assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 113,555 downloaded_date 07/10/2024 release_date 09/10/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF963FVR_KRTTGCAYMAYHNH_sorted.bed.gz processed_file_md5 bdaf5ba1ef9395d66b6a5ddd72fbf310 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF963FVR_KRTTGCAYMAYHNH_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF963FVR_KRTTGCAYMAYHNH_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF963FVR_KRTTGCAYMAYHNH.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF963FVR_KRTTGCAYMAYHNH.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 0a46b68ac0cbc1d40594d1fb318a1e23 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens HCT116;Original_cell_type=HCT116;Lab=Richard Myers, HAIB;System=digestive system;ENCODE_BED_id=ENCFF963FVR;ENCODE_bigBed_id=ENCFF097OLY;PMID=34755879;Motif_sequence=KRTTGCAYMAYHNH;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002824;is_hg38_lifted=no system_category Digestive life_stage Adult track_name Factorbook HCT116 (repl. 1, 2) Motif finding CEBPB transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BSD] [Life stage: Adult] [TFBS]