CEBPB • Ishikawa NGFTBSWKJDDVEP • Factorbook34755879 Motif finding Ishikawa TFBS Show metadata Download track Track metadata identifier NGFTBSWKJDDVEP data_source Factorbook Download track Download number_of_intervals 13,514 bp_covered 216,224 output_type transcription factor binding sites all genome_build hg38 cell_type Ishikawa biosample_type Cell line biosample_term_id EFO:0005718 tissue_category Female Reproductive encode_experiment_id ENCSR000BTT biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CEBPB assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 229,373 downloaded_date 07/10/2024 release_date 09/10/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF592ZPR_NNKATTGCRCAAYHNH_sorted.bed.gz processed_file_md5 0613a204d32ec301715fcbb49b9e619a wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF592ZPR_NNKATTGCRCAAYHNH_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF592ZPR_NNKATTGCRCAAYHNH_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF592ZPR_NNKATTGCRCAAYHNH.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF592ZPR_NNKATTGCRCAAYHNH.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 04fc77ec2e289e0b7e8b2d02cdab6cfc data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens Ishikawa;Original_cell_type=Ishikawa;Lab=Richard Myers, HAIB;System=reproductive system;ENCODE_BED_id=ENCFF592ZPR;ENCODE_bigBed_id=ENCFF010USJ;PMID=34755879;Motif_sequence=NNKATTGCRCAAYHNH;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0005718;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook Ishikawa (repl. 1, 2) Motif finding CEBPB transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BTT] [Life stage: Adult] [TFBS]
CEBPB • HepG2 NGFTBSZ2QODQOZ • Factorbook34755879 Motif finding HepG2 TFBS Show metadata Download track Track metadata identifier NGFTBSZ2QODQOZ data_source Factorbook Download track Download number_of_intervals 37,251 bp_covered 521,514 output_type transcription factor binding sites all genome_build hg38 cell_type HepG2 biosample_type Cell line biosample_term_id EFO:0001187 tissue_category Liver encode_experiment_id ENCSR000EEE biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CEBPB assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 595,511 downloaded_date 07/10/2024 release_date 10/29/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF157DSR_NNKRTTGCRYAAYH_sorted.bed.gz processed_file_md5 1b73eec98ee594bdfe57b903cfe31711 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF157DSR_NNKRTTGCRYAAYH_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF157DSR_NNKRTTGCRYAAYH_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF157DSR_NNKRTTGCRYAAYH.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF157DSR_NNKRTTGCRYAAYH.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 20325fabb9a46b42cc4f0495ce1f5066 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens HepG2;Original_cell_type=HepG2;Lab=Michael Snyder, Stanford;System=exocrine system,endocrine system,digestive system;ENCODE_BED_id=ENCFF157DSR;ENCODE_bigBed_id=ENCFF536NTI;PMID=34755879;Motif_sequence=NNKRTTGCRYAAYH;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001187;is_hg38_lifted=no system_category Digestive life_stage Child track_name Factorbook HepG2 (repl. 1, 2) Motif finding CEBPB transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000EEE] [Life stage: Child] [TFBS]
CEBPB • K562 NGFTBTFFLE4P7F • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBTFFLE4P7F data_source Factorbook Download track Download number_of_intervals 5,066 bp_covered 146,914 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR000EHE biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CEBPB assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 121,117 downloaded_date 07/10/2024 release_date 10/29/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF882ARK_TACARTTCADTGGTWTTWARYAYAKTCAC_sorted.bed.gz processed_file_md5 20fb8fa32723c2b56f5ca312cdbe3bf7 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF882ARK_TACARTTCADTGGTWTTWARYAYAKTCAC_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF882ARK_TACARTTCADTGGTWTTWARYAYAKTCAC_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF882ARK_TACARTTCADTGGTWTTWARYAYAKTCAC.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF882ARK_TACARTTCADTGGTWTTWARYAYAKTCAC.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 2b8a4836f5b851c776aae5bbffab79af data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF882ARK;ENCODE_bigBed_id=ENCFF189VBN;PMID=34755879;Motif_sequence=TACARTTCADTGGTWTTWARYAYAKTCAC;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding CEBPB transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000EHE] [Life stage: Adult] [TFBS]
CEBPB • HeLa-S3 NGFTBTNW24LAA7 • Factorbook34755879 Motif finding HeLa-S3 TFBS Show metadata Download track Track metadata identifier NGFTBTNW24LAA7 data_source Factorbook Download track Download number_of_intervals 27,846 bp_covered 278,460 output_type transcription factor binding sites all genome_build hg38 cell_type HeLa-S3 biosample_type Cell line biosample_term_id EFO:0002791 tissue_category Female Reproductive encode_experiment_id ENCSR000EDA biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CEBPB assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 355,131 downloaded_date 07/10/2024 release_date 10/29/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF014TJO_VTKDDGMAAT_sorted.bed.gz processed_file_md5 1ce5bb98d3dcb3b11ea4eb972db6513b wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF014TJO_VTKDDGMAAT_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF014TJO_VTKDDGMAAT_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF014TJO_VTKDDGMAAT.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF014TJO_VTKDDGMAAT.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 af86b847e7cb1d28889876ad43661af2 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens HeLa-S3;Original_cell_type=HeLa-S3;Lab=Michael Snyder, Stanford;System=reproductive system;ENCODE_BED_id=ENCFF014TJO;ENCODE_bigBed_id=ENCFF722WEG;PMID=34755879;Motif_sequence=VTKDDGMAAT;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002791;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook HeLa-S3 (repl. 1, 2) Motif finding CEBPB transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000EDA] [Life stage: Adult] [TFBS]
CEBPB • HepG2 NGFTBTTY4EB34D • Factorbook34755879 Motif finding HepG2 TFBS Show metadata Download track Track metadata identifier NGFTBTTY4EB34D data_source Factorbook Download track Download number_of_intervals 4,219 bp_covered 126,570 output_type transcription factor binding sites significant genome_build hg38 cell_type HepG2 biosample_type Cell line biosample_term_id EFO:0001187 tissue_category Liver encode_experiment_id ENCSR000EEE biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CEBPB assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 80,859 downloaded_date 07/10/2024 release_date 10/29/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF157DSR_GCTCACTGHAGCCTTGACCTCCTGGRCTCA_filtered.bed.gz processed_file_md5 55d5c5dbe3fb0cce6092fec049ffcb52 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF157DSR_GCTCACTGHAGCCTTGACCTCCTGGRCTCA_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF157DSR_GCTCACTGHAGCCTTGACCTCCTGGRCTCA_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF157DSR_GCTCACTGHAGCCTTGACCTCCTGGRCTCA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF157DSR_GCTCACTGHAGCCTTGACCTCCTGGRCTCA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 cbcb1c4f1b55f6d2bf02119e381b85ab data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens HepG2;Original_cell_type=HepG2;Lab=Michael Snyder, Stanford;System=exocrine system,endocrine system,digestive system;ENCODE_BED_id=ENCFF157DSR;ENCODE_bigBed_id=ENCFF536NTI;PMID=34755879;Motif_sequence=GCTCACTGHAGCCTTGACCTCCTGGRCTCA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001187;is_hg38_lifted=no system_category Digestive life_stage Child track_name Factorbook HepG2 (repl. 1, 2) Motif finding CEBPB transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR000EEE] [Life stage: Child] [TFBS]
CEBPB • Ishikawa NGFTBTZ323EC4U • Factorbook34755879 Motif finding Ishikawa TFBS Show metadata Download track Track metadata identifier NGFTBTZ323EC4U data_source Factorbook Download track Download number_of_intervals 1,988 bp_covered 51,688 output_type transcription factor binding sites significant genome_build hg38 cell_type Ishikawa biosample_type Cell line biosample_term_id EFO:0005718 tissue_category Female Reproductive encode_experiment_id ENCSR000BTT biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CEBPB assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 34,834 downloaded_date 07/10/2024 release_date 09/10/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF592ZPR_ATTCCAGCCTGGGYGACAGAGCRAGA_filtered.bed.gz processed_file_md5 f9883f7ad5c866492054a264014fc254 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF592ZPR_ATTCCAGCCTGGGYGACAGAGCRAGA_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF592ZPR_ATTCCAGCCTGGGYGACAGAGCRAGA_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF592ZPR_ATTCCAGCCTGGGYGACAGAGCRAGA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF592ZPR_ATTCCAGCCTGGGYGACAGAGCRAGA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 2d8fd549c854dd6a410c84f51724698c data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens Ishikawa;Original_cell_type=Ishikawa;Lab=Richard Myers, HAIB;System=reproductive system;ENCODE_BED_id=ENCFF592ZPR;ENCODE_bigBed_id=ENCFF010USJ;PMID=34755879;Motif_sequence=ATTCCAGCCTGGGYGACAGAGCRAGA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0005718;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook Ishikawa (repl. 1, 2) Motif finding CEBPB transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR000BTT] [Life stage: Adult] [TFBS]
CEBPB • GM12878 NGFTBUEH5Z4OEQ • Factorbook34755879 Motif finding GM12878 TFBS Show metadata Download track Track metadata identifier NGFTBUEH5Z4OEQ data_source Factorbook Download track Download number_of_intervals 9 bp_covered 198 output_type transcription factor binding sites significant genome_build hg38 cell_type GM12878 biosample_type Cell line biosample_term_id EFO:0002784 tissue_category Blood encode_experiment_id ENCSR681NOM biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CEBPB assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 545 downloaded_date 07/10/2024 release_date 07/07/2014 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF864EON_TCTBCCYRGMAACYSRTGACGY_filtered.bed.gz processed_file_md5 d31929a98262968b95582cdb7de49923 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF864EON_TCTBCCYRGMAACYSRTGACGY_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF864EON_TCTBCCYRGMAACYSRTGACGY_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF864EON_TCTBCCYRGMAACYSRTGACGY.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF864EON_TCTBCCYRGMAACYSRTGACGY.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 f8800f97204b27f3c8fbf33241b9afa4 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens GM12878;Original_cell_type=GM12878;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF864EON;ENCODE_bigBed_id=ENCFF088LCU;PMID=34755879;Motif_sequence=TCTBCCYRGMAACYSRTGACGY;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002784;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name Factorbook GM12878 (repl. 1, 2) Motif finding CEBPB transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR681NOM] [TFBS]
CEBPB • K562 NGFTBUJKGFRMTD • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBUJKGFRMTD data_source Factorbook Download track Download number_of_intervals 134 bp_covered 4,020 output_type transcription factor binding sites significant genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR000BRQ biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CEBPB assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 3,160 downloaded_date 07/10/2024 release_date 02/29/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF022KBK_ATCYADTTCYAGAACATTTTCATCAMCCCA_filtered.bed.gz processed_file_md5 721ac427f6f2f5ec891781bf4818cb00 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF022KBK_ATCYADTTCYAGAACATTTTCATCAMCCCA_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF022KBK_ATCYADTTCYAGAACATTTTCATCAMCCCA_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF022KBK_ATCYADTTCYAGAACATTTTCATCAMCCCA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF022KBK_ATCYADTTCYAGAACATTTTCATCAMCCCA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 6ff54bbd2fccc232acd339dd55ef8bbf data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Richard Myers, HAIB;System=immune system;ENCODE_BED_id=ENCFF022KBK;ENCODE_bigBed_id=ENCFF194QGF;PMID=34755879;Motif_sequence=ATCYADTTCYAGAACATTTTCATCAMCCCA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding CEBPB transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR000BRQ] [Life stage: Adult] [TFBS]
CEBPB • HepG2 NGFTBUKYNXELHP • Factorbook34755879 Motif finding HepG2 TFBS Show metadata Download track Track metadata identifier NGFTBUKYNXELHP data_source Factorbook Download track Download number_of_intervals 6,874 bp_covered 75,614 output_type transcription factor binding sites all genome_build hg38 cell_type HepG2 biosample_type Cell line biosample_term_id EFO:0001187 tissue_category Liver encode_experiment_id ENCSR000EEE biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CEBPB assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 94,193 downloaded_date 07/10/2024 release_date 10/29/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF157DSR_VTGTTTRCAMA_sorted.bed.gz processed_file_md5 3efdab44f69b5876bb5e2bf4636cab1a wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF157DSR_VTGTTTRCAMA_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF157DSR_VTGTTTRCAMA_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF157DSR_VTGTTTRCAMA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF157DSR_VTGTTTRCAMA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 6a500d692e5ae3f97bf831e7e391daca data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens HepG2;Original_cell_type=HepG2;Lab=Michael Snyder, Stanford;System=exocrine system,endocrine system,digestive system;ENCODE_BED_id=ENCFF157DSR;ENCODE_bigBed_id=ENCFF536NTI;PMID=34755879;Motif_sequence=VTGTTTRCAMA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001187;is_hg38_lifted=no system_category Digestive life_stage Child track_name Factorbook HepG2 (repl. 1, 2) Motif finding CEBPB transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000EEE] [Life stage: Child] [TFBS]
CEBPB • A549 NGFTBULIE2F2CB • Factorbook34755879 Motif finding A549 TFBS Show metadata Download track Track metadata identifier NGFTBULIE2F2CB data_source Factorbook Download track Download number_of_intervals 6,602 bp_covered 52,816 output_type transcription factor binding sites all genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR299ILN biological_replicate 1, 2, 3 technical_replicate 1_1, 2_1, 3_1 antibody CEBPB assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 65,391 downloaded_date 07/10/2024 release_date 10/27/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF738TVZ_TGAGTCAB_sorted.bed.gz processed_file_md5 2c2c6665591f71716ccbab27ef4cc178 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF738TVZ_TGAGTCAB_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF738TVZ_TGAGTCAB_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF738TVZ_TGAGTCAB.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF738TVZ_TGAGTCAB.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 26b9b418a39048455a1d663618b657fd data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens A549 treated with 100 nM dexamethasone (agonist) for 1 hour;Original_cell_type=A549;Lab=Tim Reddy, Duke;System=respiratory system;ENCODE_BED_id=ENCFF738TVZ;ENCODE_bigBed_id=ENCFF247GVV;PMID=34755879;Motif_sequence=TGAGTCAB;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name Factorbook A549 (repl. 1, 2, 3) Motif finding CEBPB transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR299ILN] [Life stage: Adult] [TFBS]
CEBPB • MCF-7 NGFTBUTPBXPKWW • Factorbook34755879 Motif finding MCF-7 TFBS Show metadata Download track Track metadata identifier NGFTBUTPBXPKWW data_source Factorbook Download track Download number_of_intervals 5,354 bp_covered 42,832 output_type transcription factor binding sites all genome_build hg38 cell_type MCF-7 biosample_type Cell line biosample_term_id EFO:0001203 tissue_category Breast encode_experiment_id ENCSR000BSR biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CEBPB assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 55,910 downloaded_date 07/10/2024 release_date 09/10/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF240ZHW_VTGACTCA_sorted.bed.gz processed_file_md5 5e979fe0d86e82a0ea20b34161168455 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF240ZHW_VTGACTCA_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF240ZHW_VTGACTCA_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF240ZHW_VTGACTCA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF240ZHW_VTGACTCA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 652ba239980d0bd05540b35ef9ae9733 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens MCF-7;Original_cell_type=MCF-7;Lab=Richard Myers, HAIB;System=exocrine system,integumental system;ENCODE_BED_id=ENCFF240ZHW;ENCODE_bigBed_id=ENCFF772ZTQ;PMID=34755879;Motif_sequence=VTGACTCA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001203;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook MCF-7 (repl. 1, 2) Motif finding CEBPB transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BSR] [Life stage: Adult] [TFBS]
CEBPB • H1-hESC NGFTBV5EYPN77W • Factorbook34755879 Motif finding H1-hESC TFBS Show metadata Download track Track metadata identifier NGFTBV5EYPN77W data_source Factorbook Download track Download number_of_intervals 3,994 bp_covered 59,910 output_type transcription factor binding sites all genome_build hg38 cell_type H1-hESC biosample_type Cell line biosample_term_id EFO:0003042 tissue_category Embryo encode_experiment_id ENCSR000EBV biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CEBPB assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 70,705 downloaded_date 07/10/2024 release_date 05/14/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF823KCM_CCASHAGGKGGCRSY_sorted.bed.gz processed_file_md5 f89ae631b50c089a5a634b21e7fd5d56 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF823KCM_CCASHAGGKGGCRSY_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF823KCM_CCASHAGGKGGCRSY_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF823KCM_CCASHAGGKGGCRSY.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF823KCM_CCASHAGGKGGCRSY.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 b417d2ff5971abc99784ad582bd20bd9 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens H1;Original_cell_type=H1;Lab=Michael Snyder, Stanford;System=NR;ENCODE_BED_id=ENCFF823KCM;ENCODE_bigBed_id=ENCFF871PTR;PMID=34755879;Motif_sequence=CCASHAGGKGGCRSY;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0003042;is_hg38_lifted=no system_category Embryo life_stage Unknown track_name Factorbook H1-hESC (repl. 1, 2) Motif finding CEBPB transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000EBV] [TFBS]
CEBPB • HepG2 NGFTBVBP7WT3ZH • Factorbook34755879 Motif finding HepG2 TFBS Show metadata Download track Track metadata identifier NGFTBVBP7WT3ZH data_source Factorbook Download track Download number_of_intervals 4,093 bp_covered 118,697 output_type transcription factor binding sites all genome_build hg38 cell_type HepG2 biosample_type Cell line biosample_term_id EFO:0001187 tissue_category Liver encode_experiment_id ENCSR000BQI biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CEBPB assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 91,224 downloaded_date 07/10/2024 release_date 02/29/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF301CNM_TTGAGCCCRGGAGGTHRAGGYTGCAGTGA_sorted.bed.gz processed_file_md5 a4e84cdac4f7cdd4fe48468a006e8cec wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF301CNM_TTGAGCCCRGGAGGTHRAGGYTGCAGTGA_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF301CNM_TTGAGCCCRGGAGGTHRAGGYTGCAGTGA_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF301CNM_TTGAGCCCRGGAGGTHRAGGYTGCAGTGA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF301CNM_TTGAGCCCRGGAGGTHRAGGYTGCAGTGA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 b9fa958ee4a81a4f1fa26aa2c15f005f data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens HepG2;Original_cell_type=HepG2;Lab=Richard Myers, HAIB;System=exocrine system,endocrine system,digestive system;ENCODE_BED_id=ENCFF301CNM;ENCODE_bigBed_id=ENCFF074JWB;PMID=34755879;Motif_sequence=TTGAGCCCRGGAGGTHRAGGYTGCAGTGA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001187;is_hg38_lifted=no system_category Digestive life_stage Child track_name Factorbook HepG2 (repl. 1, 2) Motif finding CEBPB transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BQI] [Life stage: Child] [TFBS]
CEBPB • A549 NGFTBW46CVPFTX • Factorbook34755879 Motif finding A549 TFBS Show metadata Download track Track metadata identifier NGFTBW46CVPFTX data_source Factorbook Download track Download number_of_intervals 6,847 bp_covered 75,317 output_type transcription factor binding sites all genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR299ILN biological_replicate 1, 2, 3 technical_replicate 1_1, 2_1, 3_1 antibody CEBPB assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 87,096 downloaded_date 07/10/2024 release_date 10/27/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF738TVZ_HWRWRYAAACA_sorted.bed.gz processed_file_md5 bfe9eb154ad0883f9a0c39786ba70345 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF738TVZ_HWRWRYAAACA_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF738TVZ_HWRWRYAAACA_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF738TVZ_HWRWRYAAACA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF738TVZ_HWRWRYAAACA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 7fe8e45450954e0c08c9053e12036e8d data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens A549 treated with 100 nM dexamethasone (agonist) for 1 hour;Original_cell_type=A549;Lab=Tim Reddy, Duke;System=respiratory system;ENCODE_BED_id=ENCFF738TVZ;ENCODE_bigBed_id=ENCFF247GVV;PMID=34755879;Motif_sequence=HWRWRYAAACA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name Factorbook A549 (repl. 1, 2, 3) Motif finding CEBPB transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR299ILN] [Life stage: Adult] [TFBS]
CEBPB • A549 NGFTBWEKNLAR2I • Factorbook34755879 Motif finding A549 TFBS Show metadata Download track Track metadata identifier NGFTBWEKNLAR2I data_source Factorbook Download track Download number_of_intervals 12,318 bp_covered 135,498 output_type transcription factor binding sites all genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR269IUA biological_replicate 1, 2, 3 technical_replicate 1_1, 2_1, 3_1 antibody CEBPB assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 169,846 downloaded_date 07/10/2024 release_date 10/27/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF470CPW_DRTTDTGCAAT_sorted.bed.gz processed_file_md5 904244c22e5c73900b44bc5179aaeed8 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF470CPW_DRTTDTGCAAT_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF470CPW_DRTTDTGCAAT_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF470CPW_DRTTDTGCAAT.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF470CPW_DRTTDTGCAAT.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 356fa63a21e2c0cc0d7aa4b42b06bcb9 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens A549 treated with 100 nM dexamethasone (agonist) for 12 hours;Original_cell_type=A549;Lab=Tim Reddy, Duke;System=respiratory system;ENCODE_BED_id=ENCFF470CPW;ENCODE_bigBed_id=ENCFF047UJF;PMID=34755879;Motif_sequence=DRTTDTGCAAT;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name Factorbook A549 (repl. 1, 2, 3) Motif finding CEBPB transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR269IUA] [Life stage: Adult] [TFBS]
CEBPB • A549 NGFTBWJIIA7YUC • Factorbook34755879 Motif finding A549 TFBS Show metadata Download track Track metadata identifier NGFTBWJIIA7YUC data_source Factorbook Download track Download number_of_intervals 11,739 bp_covered 117,390 output_type transcription factor binding sites all genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR190VMK biological_replicate 1, 2, 3 technical_replicate 1_1, 2_1, 3_1 antibody CEBPB assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 140,792 downloaded_date 07/10/2024 release_date 10/27/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF462AJX_TKDKGMAATH_sorted.bed.gz processed_file_md5 eab969aa820a9c446a1b6339e31787ba wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF462AJX_TKDKGMAATH_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF462AJX_TKDKGMAATH_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF462AJX_TKDKGMAATH.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF462AJX_TKDKGMAATH.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 048e8a11c1761c0520b47fcaf56bb248 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens A549 treated with 100 nM dexamethasone (agonist) for 10 hours;Original_cell_type=A549;Lab=Tim Reddy, Duke;System=respiratory system;ENCODE_BED_id=ENCFF462AJX;ENCODE_bigBed_id=ENCFF533KMU;PMID=34755879;Motif_sequence=TKDKGMAATH;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name Factorbook A549 (repl. 1, 2, 3) Motif finding CEBPB transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR190VMK] [Life stage: Adult] [TFBS]
CEBPB • A549 NGFTBWSTZJE5RN • Factorbook34755879 Motif finding A549 TFBS Show metadata Download track Track metadata identifier NGFTBWSTZJE5RN data_source Factorbook Download track Download number_of_intervals 8,286 bp_covered 66,288 output_type transcription factor binding sites all genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR190VMK biological_replicate 1, 2, 3 technical_replicate 1_1, 2_1, 3_1 antibody CEBPB assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 80,121 downloaded_date 07/10/2024 release_date 10/27/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF462AJX_TGAKTCAB_sorted.bed.gz processed_file_md5 550d9bc7b28c7759d84261605e4d5d5c wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF462AJX_TGAKTCAB_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF462AJX_TGAKTCAB_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF462AJX_TGAKTCAB.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF462AJX_TGAKTCAB.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 5a6e092e54eb9582c31e47c9901b0647 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens A549 treated with 100 nM dexamethasone (agonist) for 10 hours;Original_cell_type=A549;Lab=Tim Reddy, Duke;System=respiratory system;ENCODE_BED_id=ENCFF462AJX;ENCODE_bigBed_id=ENCFF533KMU;PMID=34755879;Motif_sequence=TGAKTCAB;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name Factorbook A549 (repl. 1, 2, 3) Motif finding CEBPB transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR190VMK] [Life stage: Adult] [TFBS]
CEBPB • HepG2 NGFTBWURKODAR5 • Factorbook34755879 Motif finding HepG2 TFBS Show metadata Download track Track metadata identifier NGFTBWURKODAR5 data_source Factorbook Download track Download number_of_intervals 3,733 bp_covered 78,393 output_type transcription factor binding sites all genome_build hg38 cell_type HepG2 biosample_type Cell line biosample_term_id EFO:0001187 tissue_category Liver encode_experiment_id ENCSR000EEX biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CEBPB assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 73,914 downloaded_date 07/10/2024 release_date 10/29/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF062USI_GCTCACTGCDACCTCDVYCTC_sorted.bed.gz processed_file_md5 3a65972bf4cd57a60c78d3fe6ac8171f wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF062USI_GCTCACTGCDACCTCDVYCTC_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF062USI_GCTCACTGCDACCTCDVYCTC_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF062USI_GCTCACTGCDACCTCDVYCTC.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF062USI_GCTCACTGCDACCTCDVYCTC.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 1f6974f869037d049afd495ddad06a0d data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens HepG2 treated with 1 mM pyruvate for 6 hours, 1 _M forskolin for 6 hours;Original_cell_type=HepG2;Lab=Michael Snyder, Stanford;System=exocrine system,endocrine system,digestive system;ENCODE_BED_id=ENCFF062USI;ENCODE_bigBed_id=ENCFF874RML;PMID=34755879;Motif_sequence=GCTCACTGCDACCTCDVYCTC;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001187;is_hg38_lifted=no system_category Digestive life_stage Child track_name Factorbook HepG2 (repl. 1, 2) Motif finding CEBPB transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000EEX] [Life stage: Child] [TFBS]
CEBPB • A549 NGFTBXD3QTE3EC • Factorbook34755879 Motif finding A549 TFBS Show metadata Download track Track metadata identifier NGFTBXD3QTE3EC data_source Factorbook Download track Download number_of_intervals 4,202 bp_covered 46,222 output_type transcription factor binding sites all genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR182OZC biological_replicate 1, 3 technical_replicate 1_1, 3_1 antibody CEBPB assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 54,553 downloaded_date 07/10/2024 release_date 10/27/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF951BHY_VTKDTGMAATW_sorted.bed.gz processed_file_md5 cf20e77e01f72207006b3a78b7ae9a76 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF951BHY_VTKDTGMAATW_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF951BHY_VTKDTGMAATW_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF951BHY_VTKDTGMAATW.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF951BHY_VTKDTGMAATW.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 82edc7bd30b08c8e187031fbd197182a data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens A549 treated with 100 nM dexamethasone (agonist) for 2 hours;Original_cell_type=A549;Lab=Tim Reddy, Duke;System=respiratory system;ENCODE_BED_id=ENCFF951BHY;ENCODE_bigBed_id=ENCFF095AKP;PMID=34755879;Motif_sequence=VTKDTGMAATW;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name Factorbook A549 (repl. 1, 3) Motif finding CEBPB transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR182OZC] [Life stage: Adult] [TFBS]
CEBPB • A549 NGFTBXI5IXZ26A • Factorbook34755879 Motif finding A549 TFBS Show metadata Download track Track metadata identifier NGFTBXI5IXZ26A data_source Factorbook Download track Download number_of_intervals 10,432 bp_covered 83,456 output_type transcription factor binding sites all genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR000BUB biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CEBPB assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 107,905 downloaded_date 07/10/2024 release_date 09/10/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF894YJQ_TGAGTCAY_sorted.bed.gz processed_file_md5 eeb561b17f2d4878b8f371fabd72cce4 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF894YJQ_TGAGTCAY_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF894YJQ_TGAGTCAY_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF894YJQ_TGAGTCAY.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF894YJQ_TGAGTCAY.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 579b3046e56b99434a7f687b66775a86 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens A549;Original_cell_type=A549;Lab=Richard Myers, HAIB;System=respiratory system;ENCODE_BED_id=ENCFF894YJQ;ENCODE_bigBed_id=ENCFF781RLJ;PMID=34755879;Motif_sequence=TGAGTCAY;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name Factorbook A549 (repl. 1, 2) Motif finding CEBPB transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BUB] [Life stage: Adult] [TFBS]