CEBPB • A549 NGFTBXIS6UACTE • Factorbook34755879 Motif finding A549 TFBS Show metadata Download track Track metadata identifier NGFTBXIS6UACTE data_source Factorbook Download track Download number_of_intervals 2,256 bp_covered 18,048 output_type transcription factor binding sites all genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR474DCX biological_replicate 1, 2, 3 technical_replicate 1_1, 2_1, 3_1 antibody CEBPB assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 22,243 downloaded_date 07/10/2024 release_date 10/27/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF796MCF_TGCAAACA_sorted.bed.gz processed_file_md5 a09a453ca6a8f630475161a6a5311c3b wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF796MCF_TGCAAACA_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF796MCF_TGCAAACA_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF796MCF_TGCAAACA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF796MCF_TGCAAACA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 27d481ce78bb15cda1c749fb1cf81aab data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens A549 treated with 100 nM dexamethasone (agonist) for 8 hours;Original_cell_type=A549;Lab=Tim Reddy, Duke;System=respiratory system;ENCODE_BED_id=ENCFF796MCF;ENCODE_bigBed_id=ENCFF043TLL;PMID=34755879;Motif_sequence=TGCAAACA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name Factorbook A549 (repl. 1, 2, 3) Motif finding CEBPB transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR474DCX] [Life stage: Adult] [TFBS]
CEBPB • MCF-7 NGFTBY37XFGUGY • Factorbook34755879 Motif finding MCF-7 TFBS Show metadata Download track Track metadata identifier NGFTBY37XFGUGY data_source Factorbook Download track Download number_of_intervals 22,420 bp_covered 313,880 output_type transcription factor binding sites all genome_build hg38 cell_type MCF-7 biosample_type Cell line biosample_term_id EFO:0001203 tissue_category Breast encode_experiment_id ENCSR000BSR biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CEBPB assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 358,490 downloaded_date 07/10/2024 release_date 09/10/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF240ZHW_KRTTGCRCAAYHNB_sorted.bed.gz processed_file_md5 e7fb15021efc695b9fc2be186aca4a22 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF240ZHW_KRTTGCRCAAYHNB_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF240ZHW_KRTTGCRCAAYHNB_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF240ZHW_KRTTGCRCAAYHNB.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF240ZHW_KRTTGCRCAAYHNB.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 051e0198db63e71d81c8f8b0dcbbe96c data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens MCF-7;Original_cell_type=MCF-7;Lab=Richard Myers, HAIB;System=exocrine system,integumental system;ENCODE_BED_id=ENCFF240ZHW;ENCODE_bigBed_id=ENCFF772ZTQ;PMID=34755879;Motif_sequence=KRTTGCRCAAYHNB;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001203;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook MCF-7 (repl. 1, 2) Motif finding CEBPB transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BSR] [Life stage: Adult] [TFBS]
CEBPB • A549 NGFTBYO5WIA32K • Factorbook34755879 Motif finding A549 TFBS Show metadata Download track Track metadata identifier NGFTBYO5WIA32K data_source Factorbook Download track Download number_of_intervals 10,144 bp_covered 81,152 output_type transcription factor binding sites all genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR375BUB biological_replicate 2, 3 technical_replicate 2_1, 3_1 antibody CEBPB assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 98,355 downloaded_date 07/10/2024 release_date 10/27/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF202LMH_TGARTCAB_sorted.bed.gz processed_file_md5 c7db9b1067e3adb17ec6c4592c333054 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF202LMH_TGARTCAB_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF202LMH_TGARTCAB_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF202LMH_TGARTCAB.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF202LMH_TGARTCAB.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 6075ba6cdbd3465033926db6c4b675a1 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens A549 treated with 100 nM dexamethasone (agonist) for 6 hours;Original_cell_type=A549;Lab=Tim Reddy, Duke;System=respiratory system;ENCODE_BED_id=ENCFF202LMH;ENCODE_bigBed_id=ENCFF727YHN;PMID=34755879;Motif_sequence=TGARTCAB;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name Factorbook A549 (repl. 2, 3) Motif finding CEBPB transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR375BUB] [Life stage: Adult] [TFBS]
CEBPB • A549 NGFTBYORHEAFIS • Factorbook34755879 Motif finding A549 TFBS Show metadata Download track Track metadata identifier NGFTBYORHEAFIS data_source Factorbook Download track Download number_of_intervals 15,589 bp_covered 171,479 output_type transcription factor binding sites all genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR190VMK biological_replicate 1, 2, 3 technical_replicate 1_1, 2_1, 3_1 antibody CEBPB assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 212,333 downloaded_date 07/10/2024 release_date 10/27/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF462AJX_DATTGCAYAAY_sorted.bed.gz processed_file_md5 5d4c4894f4def22542a3cac0c6617047 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF462AJX_DATTGCAYAAY_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF462AJX_DATTGCAYAAY_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF462AJX_DATTGCAYAAY.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF462AJX_DATTGCAYAAY.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 4b175c1d1941990be481e344169d9975 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens A549 treated with 100 nM dexamethasone (agonist) for 10 hours;Original_cell_type=A549;Lab=Tim Reddy, Duke;System=respiratory system;ENCODE_BED_id=ENCFF462AJX;ENCODE_bigBed_id=ENCFF533KMU;PMID=34755879;Motif_sequence=DATTGCAYAAY;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name Factorbook A549 (repl. 1, 2, 3) Motif finding CEBPB transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR190VMK] [Life stage: Adult] [TFBS]
CEBPB • A549 NGFTBYRHXFEJH3 • Factorbook34755879 Motif finding A549 TFBS Show metadata Download track Track metadata identifier NGFTBYRHXFEJH3 data_source Factorbook Download track Download number_of_intervals 17,771 bp_covered 195,481 output_type transcription factor binding sites all genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR752AQK biological_replicate 1, 2, 3 technical_replicate 1_1, 2_1, 3_1 antibody CEBPB assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 230,482 downloaded_date 07/10/2024 release_date 10/27/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF149ZWX_ATTGCAHAAYH_sorted.bed.gz processed_file_md5 2c7d91a5659502f5ecc3dff1cccdacea wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF149ZWX_ATTGCAHAAYH_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF149ZWX_ATTGCAHAAYH_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF149ZWX_ATTGCAHAAYH.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF149ZWX_ATTGCAHAAYH.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 58d84d4f799acfd94923cc336828aab8 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens A549 treated with 100 nM dexamethasone (agonist) for 5 hours;Original_cell_type=A549;Lab=Tim Reddy, Duke;System=respiratory system;ENCODE_BED_id=ENCFF149ZWX;ENCODE_bigBed_id=ENCFF527GGH;PMID=34755879;Motif_sequence=ATTGCAHAAYH;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name Factorbook A549 (repl. 1, 2, 3) Motif finding CEBPB transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR752AQK] [Life stage: Adult] [TFBS]
CEBPB • K562 NGFTBZF37CSQN5 • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBZF37CSQN5 data_source Factorbook Download track Download number_of_intervals 4,043 bp_covered 32,344 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR000EHE biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CEBPB assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 42,294 downloaded_date 07/10/2024 release_date 10/29/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF882ARK_TGAGTCAB_sorted.bed.gz processed_file_md5 f4178f9aafd239dfe7a9c4ccf60ea931 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF882ARK_TGAGTCAB_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF882ARK_TGAGTCAB_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF882ARK_TGAGTCAB.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF882ARK_TGAGTCAB.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 76e7ae9ab614a95ec897a8259195f1fa data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF882ARK;ENCODE_bigBed_id=ENCFF189VBN;PMID=34755879;Motif_sequence=TGAGTCAB;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding CEBPB transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000EHE] [Life stage: Adult] [TFBS]
CEBPB • K562 NGFTBZFCKTRMWD • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBZFCKTRMWD data_source Factorbook Download track Download number_of_intervals 515 bp_covered 14,935 output_type transcription factor binding sites significant genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR000EHE biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CEBPB assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 10,832 downloaded_date 07/10/2024 release_date 10/29/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF882ARK_GATGAAAAWGTTCTGGAAWTRGATRGTGG_filtered.bed.gz processed_file_md5 3b249ac8ad5ae9557b0f5b1c1ed069fb wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF882ARK_GATGAAAAWGTTCTGGAAWTRGATRGTGG_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF882ARK_GATGAAAAWGTTCTGGAAWTRGATRGTGG_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF882ARK_GATGAAAAWGTTCTGGAAWTRGATRGTGG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF882ARK_GATGAAAAWGTTCTGGAAWTRGATRGTGG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 d6a8b1eeb55c27ab2a35707604559103 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF882ARK;ENCODE_bigBed_id=ENCFF189VBN;PMID=34755879;Motif_sequence=GATGAAAAWGTTCTGGAAWTRGATRGTGG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding CEBPB transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR000EHE] [Life stage: Adult] [TFBS]
Reference annotation (CEBPB) NGHOMPX7V7YAX7 • HOMER20513432 Motif finding Reference annotation (CEBPB) TFBS Show metadata Download track Track metadata identifier NGHOMPX7V7YAX7 data_source HOMER Download track Download number_of_intervals 1,485,711 bp_covered 14,857,110 output_type transcription factor binding sites genome_build hg38 cell_type Not applicable biosample_type Not applicable biosample_term_id Not applicable tissue_category Not applicable encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody CEBPB assay Motif finding file_format bed bed6+5 Homer file_size 15,481,942 downloaded_date 08/12/2023 release_date 10/19/2020 date_added_to_filer 12/19/2025 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Homer/bed11/hg38/CEBP-AP1_bZIP.hg38.processed.bed.gz processed_file_md5 067b1b3102e4cbbc696109fd59ea1b95 wget_command wget https://filer2.niagads.org/Annotationtracks/Homer/bed11/hg38/CEBP-AP1_bZIP.hg38.processed.bed.gz -P GADB/Annotationtracks/Homer/bed11/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Homer/bed11/hg38/CEBP-AP1_bZIP.hg38.processed.bed.gz.tbi -P GADB/Annotationtracks/Homer/bed11/hg38/ link_out_url https://homer.ucsd.edu/homer/ raw_file_url https://homer.ucsd.edu/homer/data/motifs/homer.KnownMotifs.hg38.191020.bed.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/Homer/homer.KnownMotifs.hg38.191020.bed.gz -P GADB/Annotationtracks/Downloads/Homer/ raw_file_md5 7f59c5d4bbf50fea7476a173961ea174 data_category TFBS [Transcription Factor Binding Site] Genomic feature type HOMER transcription factor binding sites track_description version=191020;TF_name=CEBP:AP1;DNA_binding_domain=bZIP;Cell_type=ThioMac;Assay=ChIP-Seq;Origin=GSE21512;schema=BED6+5;dataSource_pubmed_id=20513432;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/HOMER.html;original_biosample_term_id=Not applicable;is_hg38_lifted=no system_category Not applicable life_stage Not applicable track_name HOMER Motif finding CEBPB transcription factor binding sites (bed6+5 Homer) [TFBS]
Reference annotation (CEBPB) NGHOMUQGD7LMJC • HOMER20513432 Motif finding Reference annotation (CEBPB) TFBS Show metadata Download track Track metadata identifier NGHOMUQGD7LMJC data_source HOMER Download track Download number_of_intervals 1,855,003 bp_covered 18,550,030 output_type transcription factor binding sites genome_build hg38 cell_type Not applicable biosample_type Not applicable biosample_term_id Not applicable tissue_category Not applicable encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody CEBPB assay Motif finding file_format bed bed6+5 Homer file_size 18,299,458 downloaded_date 08/12/2023 release_date 10/19/2020 date_added_to_filer 12/19/2025 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Homer/bed11/hg38/CEBP_bZIP.hg38.processed.bed.gz processed_file_md5 8554752f9ab0ef08e0aede9912fc8067 wget_command wget https://filer2.niagads.org/Annotationtracks/Homer/bed11/hg38/CEBP_bZIP.hg38.processed.bed.gz -P GADB/Annotationtracks/Homer/bed11/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Homer/bed11/hg38/CEBP_bZIP.hg38.processed.bed.gz.tbi -P GADB/Annotationtracks/Homer/bed11/hg38/ link_out_url https://homer.ucsd.edu/homer/ raw_file_url https://homer.ucsd.edu/homer/data/motifs/homer.KnownMotifs.hg38.191020.bed.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/Homer/homer.KnownMotifs.hg38.191020.bed.gz -P GADB/Annotationtracks/Downloads/Homer/ raw_file_md5 7f59c5d4bbf50fea7476a173961ea174 data_category TFBS [Transcription Factor Binding Site] Genomic feature type HOMER transcription factor binding sites track_description version=191020;TF_name=CEBP;DNA_binding_domain=bZIP;Cell_type=ThioMac;Assay=ChIP-Seq;Origin=GSE21512;schema=BED6+5;dataSource_pubmed_id=20513432;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/HOMER.html;original_biosample_term_id=Not applicable;is_hg38_lifted=no system_category Not applicable life_stage Not applicable track_name HOMER Motif finding CEBPB transcription factor binding sites (bed6+5 Homer) [TFBS]
CEBPD • HepG2 NGENCEU2XIPBKF • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq HepG2 TF Show metadata Download track Track metadata identifier NGENCEU2XIPBKF data_source ENCODE Download track Download number_of_intervals 10,417 bp_covered 2,578,173 output_type IDR thresholded peaks genome_build hg38 cell_type HepG2 biosample_type Cell line biosample_term_id EFO:0001187 tissue_category Liver encode_experiment_id ENCSR520MCD biological_replicate 2 technical_replicate 2_1 antibody CEBPD assay TF ChIP-seq file_format bed narrowPeak file_size 171,067 downloaded_date 06/12/2022 release_date 07/01/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF842SIP.bed.gz processed_file_md5 81a6849280f7d9a4432614b68fc9c7d8 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF842SIP.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF842SIP.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF842SIP/@@download/ENCFF842SIP.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF842SIP.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 5a1544f7e8136f898489e86b69b00675 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens CEBPD;Lab=Richard Myers, HAIB;ENCODE_internal_tags=RegulomeDB_2_2,RegulomeDB_2_1;Life_stage_age=child 15 years;Reference=NR;External_resources=GEO:GSE170461;Project=ENCODE;Award=UM1HG009411;Experiment_date_released=2020-07-09,2016-10-11;Submitted_track_name=rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=HepG2;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_system_slims=exocrine system,endocrine system,digestive system;ENCODE_biosample_term_synonyms=Hep-G2,HepG2 cell;Analysis_title=ENCODE4 v1.4.0 GRCh38;GM=[Method:CRISPR|Category:insertion];schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001187;is_hg38_lifted=no system_category Digestive life_stage Child track_name ENCODE HepG2 (repl. 2) TF ChIP-seq CEBPD IDR thresholded peaks (narrowPeak) [Experiment: ENCSR520MCD] [Life stage: Child] [TF ChIP-seq peaks]
CEBPD • HepG2 NGENCKHVIJCTRQ • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq HepG2 TF Show metadata Download track Track metadata identifier NGENCKHVIJCTRQ data_source ENCODE Download track Download number_of_intervals 15,843 bp_covered 4,749,622 output_type IDR thresholded peaks genome_build hg38 cell_type HepG2 biosample_type Cell line biosample_term_id EFO:0001187 tissue_category Liver encode_experiment_id ENCSR520MCD biological_replicate 1 technical_replicate 1_1 antibody CEBPD assay TF ChIP-seq file_format bed narrowPeak file_size 266,802 downloaded_date 06/12/2022 release_date 07/01/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF235OGQ.bed.gz processed_file_md5 f1ff0c420138a8d44fb028030cd38d13 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF235OGQ.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF235OGQ.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF235OGQ/@@download/ENCFF235OGQ.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF235OGQ.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 ed612e055316b264b77037366e925c8a data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens CEBPD;Lab=Richard Myers, HAIB;ENCODE_internal_tags=RegulomeDB_2_2,RegulomeDB_2_1;Life_stage_age=child 15 years;Reference=NR;External_resources=GEO:GSE170461;Project=ENCODE;Award=UM1HG009411;Experiment_date_released=2020-07-09,2016-10-11;Submitted_track_name=rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=HepG2;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_system_slims=exocrine system,endocrine system,digestive system;ENCODE_biosample_term_synonyms=Hep-G2,HepG2 cell;Analysis_title=ENCODE4 v1.4.0 GRCh38;GM=[Method:CRISPR|Category:insertion];schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001187;is_hg38_lifted=no system_category Digestive life_stage Child track_name ENCODE HepG2 (repl. 1) TF ChIP-seq CEBPD IDR thresholded peaks (narrowPeak) [Experiment: ENCSR520MCD] [Life stage: Child] [TF ChIP-seq peaks]
CEBPD • HepG2 NGENCLUP5TS6RL • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq HepG2 TF Show metadata Download track Track metadata identifier NGENCLUP5TS6RL data_source ENCODE Download track Download number_of_intervals 19,712 bp_covered 5,272,922 output_type IDR thresholded peaks genome_build hg38 cell_type HepG2 biosample_type Cell line biosample_term_id EFO:0001187 tissue_category Liver encode_experiment_id ENCSR520MCD biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CEBPD assay TF ChIP-seq file_format bed narrowPeak file_size 335,227 downloaded_date 06/12/2022 release_date 07/01/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF345JDB.bed.gz processed_file_md5 78ea7e55e69f756667b930997899ebfd wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF345JDB.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF345JDB.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF345JDB/@@download/ENCFF345JDB.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF345JDB.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 f0b912f8c4918012652ff3246a9d0933 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens CEBPD;Lab=Richard Myers, HAIB;ENCODE_internal_tags=RegulomeDB_2_2,RegulomeDB_2_1;Life_stage_age=child 15 years;Reference=NR;External_resources=GEO:GSE170461;Project=ENCODE;Award=UM1HG009411;Experiment_date_released=2020-07-09,2016-10-11;Submitted_track_name=pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=HepG2;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_system_slims=exocrine system,endocrine system,digestive system;ENCODE_biosample_term_synonyms=Hep-G2,HepG2 cell;Analysis_title=ENCODE4 v1.4.0 GRCh38;GM=[Method:CRISPR|Category:insertion];schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001187;is_hg38_lifted=no system_category Digestive life_stage Child track_name ENCODE HepG2 (repl. 1, 2) TF ChIP-seq CEBPD IDR thresholded peaks (narrowPeak) [Experiment: ENCSR520MCD] [Life stage: Child] [TF ChIP-seq peaks]
CEBPD • HepG2 NGENCPLYRAWASE • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq HepG2 TF Show metadata Download track Track metadata identifier NGENCPLYRAWASE data_source ENCODE Download track Download number_of_intervals 18,053 bp_covered 4,771,160 output_type conservative IDR thresholded peaks genome_build hg38 cell_type HepG2 biosample_type Cell line biosample_term_id EFO:0001187 tissue_category Liver encode_experiment_id ENCSR520MCD biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CEBPD assay TF ChIP-seq file_format bed narrowPeak file_size 308,716 downloaded_date 06/12/2022 release_date 07/01/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF710XVN.bed.gz processed_file_md5 1cba4cd68facba1f95434ec3e7262e63 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF710XVN.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF710XVN.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF710XVN/@@download/ENCFF710XVN.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF710XVN.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 e88a45ebd1dc48027b04ff8f8e8f60b8 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq conservative IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens CEBPD;Lab=Richard Myers, HAIB;ENCODE_internal_tags=RegulomeDB_2_2,RegulomeDB_2_1;Life_stage_age=child 15 years;Reference=NR;External_resources=GEO:GSE170461;Project=ENCODE;Award=UM1HG009411;Experiment_date_released=2020-07-09,2016-10-11;Submitted_track_name=rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=HepG2;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_system_slims=exocrine system,endocrine system,digestive system;ENCODE_biosample_term_synonyms=Hep-G2,HepG2 cell;Analysis_title=ENCODE4 v1.4.0 GRCh38;GM=[Method:CRISPR|Category:insertion];schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001187;is_hg38_lifted=no system_category Digestive life_stage Child track_name ENCODE HepG2 (repl. 1, 2) TF ChIP-seq CEBPD conservative IDR thresholded peaks (narrowPeak) [Experiment: ENCSR520MCD] [Life stage: Child] [TF ChIP-seq peaks]
CEBPG • HepG2 NGENC44Z3SQUOL • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq HepG2 TF Show metadata Download track Track metadata identifier NGENC44Z3SQUOL data_source ENCODE Download track Download number_of_intervals 30,045 bp_covered 8,043,594 output_type IDR thresholded peaks genome_build hg38 cell_type HepG2 biosample_type Cell line biosample_term_id EFO:0001187 tissue_category Liver encode_experiment_id ENCSR639IIZ biological_replicate 1 technical_replicate 1_1 antibody CEBPG assay TF ChIP-seq file_format bed narrowPeak file_size 514,769 downloaded_date 06/12/2022 release_date 12/03/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF671AKZ.bed.gz processed_file_md5 337fb79876233ccd2ea80ba7ce658761 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF671AKZ.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF671AKZ.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF671AKZ/@@download/ENCFF671AKZ.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF671AKZ.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 47e8bab331bd9e72bfb07ab05c3170be data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens CEBPG;Lab=Richard Myers, HAIB;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=child 15 years;Reference=PMID:32728244;External_resources=GEO:GSE96281,FactorBook:ENCSR639IIZ;Project=ENCODE;Award=U54HG006998;Experiment_date_released=2016-11-08,2016-10-11;Submitted_track_name=rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=HepG2;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_system_slims=exocrine system,endocrine system,digestive system;ENCODE_biosample_term_synonyms=Hep-G2,HepG2 cell;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=[Method:CRISPR|Category:insertion];schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001187;is_hg38_lifted=no system_category Digestive life_stage Child track_name ENCODE HepG2 (repl. 1) TF ChIP-seq CEBPG IDR thresholded peaks (narrowPeak) [Experiment: ENCSR639IIZ] [Life stage: Child] [TF ChIP-seq peaks]
CEBPG • K562 NGENC4TJYRGTL5 • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq K562 TF Show metadata Download track Track metadata identifier NGENC4TJYRGTL5 data_source ENCODE Download track Download number_of_intervals 9,115 bp_covered 3,209,780 output_type IDR thresholded peaks genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR058DRG biological_replicate 2 technical_replicate 2_1 antibody CEBPG assay TF ChIP-seq file_format bed narrowPeak file_size 171,147 downloaded_date 05/15/2024 release_date 07/23/2022 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF916QEH.bed.gz processed_file_md5 0738fd4a72d76a28ae310a0d750b5c0a wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF916QEH.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF916QEH.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF916QEH/@@download/ENCFF916QEH.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF916QEH.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 768d8525161fd71ce3c9d3a7d0eb8649 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens K562 genetically modified (insertion) using CRISPR targeting H. sapiens CEBPG;Lab=Richard Myers, HAIB;ENCODE_internal_tags=RegulomeDB_2_2,RegulomeDB_2_1;Life_stage_age=adult 53 years;Reference=NR;External_resources=GEO:GSE230993;Project=ENCODE;Award=UM1HG009411;Experiment_date_released=2022-08-15,2022-01-04;Submitted_track_name=rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=hematopoietic cell,leukocyte,cancer cell;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=K562 cell,K-562 cell,K-562;Analysis_title=ENCODE4 v1.8.0 GRCh38;GM=[Method:CRISPR|Category:insertion];schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name ENCODE K562 (repl. 2) TF ChIP-seq CEBPG IDR thresholded peaks (narrowPeak) [Experiment: ENCSR058DRG] [Life stage: Adult] [TF ChIP-seq peaks]
CEBPG • K562 NGENC4VZHSOJ3C • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq K562 TF Show metadata Download track Track metadata identifier NGENC4VZHSOJ3C data_source ENCODE Download track Download number_of_intervals 40,113 bp_covered 17,436,476 output_type conservative IDR thresholded peaks genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR490LWA biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CEBPG assay TF ChIP-seq file_format bed narrowPeak file_size 790,436 downloaded_date 06/12/2022 release_date 12/04/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF791RTL.bed.gz processed_file_md5 16ae95853ebbceeddabc8e09a33ca5d9 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF791RTL.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF791RTL.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF791RTL/@@download/ENCFF791RTL.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF791RTL.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 211e44bfcdde26bca75eebadd7f22417 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq conservative IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens K562 stably expressing CEBPG;Lab=Michael Snyder, Stanford;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,ENCYCLOPEDIAv2,RegulomeDB_2_1,RegulomeDB_2_2;Life_stage_age=adult 53 years;Reference=PMCID:PMC7333332;External_resources=GEO:GSE105728,FactorBook:ENCSR490LWA;Project=ENCODE;Award=U54HG006996;Experiment_date_released=2017-04-14,2016-08-24;Submitted_track_name=rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=hematopoietic cell,leukocyte,cancer cell;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=K562 cell,K-562 cell,K-562;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name ENCODE K562 (repl. 1, 2) TF ChIP-seq CEBPG conservative IDR thresholded peaks (narrowPeak) [Experiment: ENCSR490LWA] [Life stage: Adult] [TF ChIP-seq peaks]
CEBPG • MCF-7 NGENC7U76FQ5TC • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq MCF-7 TF Show metadata Download track Track metadata identifier NGENC7U76FQ5TC data_source ENCODE Download track Download number_of_intervals 8,398 bp_covered 4,435,675 output_type IDR thresholded peaks genome_build hg38 cell_type MCF-7 biosample_type Cell line biosample_term_id EFO:0001203 tissue_category Breast encode_experiment_id ENCSR094ZCF biological_replicate 2 technical_replicate 2_1 antibody CEBPG assay TF ChIP-seq file_format bed narrowPeak file_size 163,359 downloaded_date 06/12/2022 release_date 12/04/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF142HZN.bed.gz processed_file_md5 1007b18cda2683f76dba11af7dca3ef1 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF142HZN.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF142HZN.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF142HZN/@@download/ENCFF142HZN.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF142HZN.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 004968e8b3823566911e8efccd47c5a2 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens MCF-7 stably expressing CEBPG;Lab=Kevin White, UChicago;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,ENCYCLOPEDIAv2,RegulomeDB_2_1,RegulomeDB_2_2;Life_stage_age=adult 69 years;Reference=PMID:32728046;External_resources=FactorBook:ENCSR094ZCF,GEO:GSE105249;Project=ENCODE;Award=U54HG006996;Experiment_date_released=2016-06-13,2016-05-18;Submitted_track_name=rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=MCF-7;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_system_slims=integumental system,exocrine system;ENCODE_biosample_term_synonyms=MCF7 cell,MCF-7 cell,MCF7;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001203;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name ENCODE MCF-7 (repl. 2) TF ChIP-seq CEBPG IDR thresholded peaks (narrowPeak) [Experiment: ENCSR094ZCF] [Life stage: Adult] [TF ChIP-seq peaks]
CEBPG • K562 NGENCA4AHAIGJG • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq K562 TF Show metadata Download track Track metadata identifier NGENCA4AHAIGJG data_source ENCODE Download track Download number_of_intervals 29,552 bp_covered 12,071,486 output_type IDR thresholded peaks genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR490LWA biological_replicate 2 technical_replicate 2_1 antibody CEBPG assay TF ChIP-seq file_format bed narrowPeak file_size 565,697 downloaded_date 06/12/2022 release_date 12/04/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF634SZR.bed.gz processed_file_md5 41e2088735a2c367b5a47d8818091100 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF634SZR.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF634SZR.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF634SZR/@@download/ENCFF634SZR.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF634SZR.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 41f4eb1fb3719fc8b50dc39da9a68176 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens K562 stably expressing CEBPG;Lab=Michael Snyder, Stanford;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,ENCYCLOPEDIAv2,RegulomeDB_2_1,RegulomeDB_2_2;Life_stage_age=adult 53 years;Reference=PMCID:PMC7333332;External_resources=GEO:GSE105728,FactorBook:ENCSR490LWA;Project=ENCODE;Award=U54HG006996;Experiment_date_released=2017-04-14,2016-08-24;Submitted_track_name=rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=hematopoietic cell,leukocyte,cancer cell;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=K562 cell,K-562 cell,K-562;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name ENCODE K562 (repl. 2) TF ChIP-seq CEBPG IDR thresholded peaks (narrowPeak) [Experiment: ENCSR490LWA] [Life stage: Adult] [TF ChIP-seq peaks]
CEBPG • MCF-7 NGENCCEEQMFYBC • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq MCF-7 TF Show metadata Download track Track metadata identifier NGENCCEEQMFYBC data_source ENCODE Download track Download number_of_intervals 15,316 bp_covered 7,932,679 output_type conservative IDR thresholded peaks genome_build hg38 cell_type MCF-7 biosample_type Cell line biosample_term_id EFO:0001203 tissue_category Breast encode_experiment_id ENCSR094ZCF biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CEBPG assay TF ChIP-seq file_format bed narrowPeak file_size 301,348 downloaded_date 06/12/2022 release_date 12/04/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF155HZI.bed.gz processed_file_md5 e886b0d2d8084d403218e7150aecbbe0 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF155HZI.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF155HZI.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF155HZI/@@download/ENCFF155HZI.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF155HZI.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 a782c0ab19e0ecd16f642eaa84b78d4e data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq conservative IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens MCF-7 stably expressing CEBPG;Lab=Kevin White, UChicago;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,ENCYCLOPEDIAv2,RegulomeDB_2_1,RegulomeDB_2_2;Life_stage_age=adult 69 years;Reference=PMID:32728046;External_resources=FactorBook:ENCSR094ZCF,GEO:GSE105249;Project=ENCODE;Award=U54HG006996;Experiment_date_released=2016-06-13,2016-05-18;Submitted_track_name=rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=MCF-7;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_system_slims=integumental system,exocrine system;ENCODE_biosample_term_synonyms=MCF7 cell,MCF-7 cell,MCF7;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001203;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name ENCODE MCF-7 (repl. 1, 2) TF ChIP-seq CEBPG conservative IDR thresholded peaks (narrowPeak) [Experiment: ENCSR094ZCF] [Life stage: Adult] [TF ChIP-seq peaks]
CEBPG • MCF-7 NGENCCQ2NEXFZE • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq MCF-7 TF Show metadata Download track Track metadata identifier NGENCCQ2NEXFZE data_source ENCODE Download track Download number_of_intervals 15,099 bp_covered 7,819,839 output_type IDR thresholded peaks genome_build hg38 cell_type MCF-7 biosample_type Cell line biosample_term_id EFO:0001203 tissue_category Breast encode_experiment_id ENCSR094ZCF biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CEBPG assay TF ChIP-seq file_format bed narrowPeak file_size 297,240 downloaded_date 06/12/2022 release_date 12/04/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF183GPM.bed.gz processed_file_md5 7caaab0f8a9e696e07a1c40320a6c2d7 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF183GPM.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF183GPM.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF183GPM/@@download/ENCFF183GPM.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF183GPM.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 f56beb0a50e58d390358e6398d952606 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens MCF-7 stably expressing CEBPG;Lab=Kevin White, UChicago;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,ENCYCLOPEDIAv2,RegulomeDB_2_1,RegulomeDB_2_2;Life_stage_age=adult 69 years;Reference=PMID:32728046;External_resources=FactorBook:ENCSR094ZCF,GEO:GSE105249;Project=ENCODE;Award=U54HG006996;Experiment_date_released=2016-06-13,2016-05-18;Submitted_track_name=pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=MCF-7;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_system_slims=integumental system,exocrine system;ENCODE_biosample_term_synonyms=MCF7 cell,MCF-7 cell,MCF7;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001203;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name ENCODE MCF-7 (repl. 1, 2) TF ChIP-seq CEBPG IDR thresholded peaks (narrowPeak) [Experiment: ENCSR094ZCF] [Life stage: Adult] [TF ChIP-seq peaks]