CEBPZ • GM12878 NGFTB3VKTKPULH • Factorbook34755879 Motif finding GM12878 TFBS Show metadata Download track Track metadata identifier NGFTB3VKTKPULH data_source Factorbook Download track Download number_of_intervals 551 bp_covered 11,571 output_type transcription factor binding sites all genome_build hg38 cell_type GM12878 biosample_type Cell line biosample_term_id EFO:0002784 tissue_category Blood encode_experiment_id ENCSR347NOB biological_replicate 1, 3 technical_replicate 1_1, 3_1 antibody CEBPZ assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 11,356 downloaded_date 07/10/2024 release_date 03/02/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF639KLW_TGGYYVVWDBKNCTGTCAMTC_sorted.bed.gz processed_file_md5 31a6fc59806f97ab06e14ee6d76354a4 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF639KLW_TGGYYVVWDBKNCTGTCAMTC_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF639KLW_TGGYYVVWDBKNCTGTCAMTC_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF639KLW_TGGYYVVWDBKNCTGTCAMTC.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF639KLW_TGGYYVVWDBKNCTGTCAMTC.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 42a259a75e4089cb8d4a7c7250e8a55d data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens GM12878;Original_cell_type=GM12878;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF639KLW;ENCODE_bigBed_id=ENCFF932XBQ;PMID=34755879;Motif_sequence=TGGYYVVWDBKNCTGTCAMTC;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002784;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name Factorbook GM12878 (repl. 1, 3) Motif finding CEBPZ transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR347NOB] [TFBS]
CEBPZ • K562 NGFTB66ZND4KSY • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTB66ZND4KSY data_source Factorbook Download track Download number_of_intervals 181 bp_covered 3,620 output_type transcription factor binding sites significant genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR618GDK biological_replicate 1, 4 technical_replicate 1_1, 4_1 antibody CEBPZ assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 2,985 downloaded_date 07/10/2024 release_date 07/07/2014 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF588GNU_YRAAACCATTTTTTCCTCCT_filtered.bed.gz processed_file_md5 2755ca7b342a9d632c2811257a4300f7 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF588GNU_YRAAACCATTTTTTCCTCCT_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF588GNU_YRAAACCATTTTTTCCTCCT_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF588GNU_YRAAACCATTTTTTCCTCCT.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF588GNU_YRAAACCATTTTTTCCTCCT.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 5db01cb00f2dfcb3aa43727b246f068f data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF588GNU;ENCODE_bigBed_id=ENCFF909BYC;PMID=34755879;Motif_sequence=YRAAACCATTTTTTCCTCCT;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 4) Motif finding CEBPZ transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR618GDK] [Life stage: Adult] [TFBS]
CEBPZ • GM12878 NGFTBCGVP5CVK4 • Factorbook34755879 Motif finding GM12878 TFBS Show metadata Download track Track metadata identifier NGFTBCGVP5CVK4 data_source Factorbook Download track Download number_of_intervals 60 bp_covered 1,740 output_type transcription factor binding sites all genome_build hg38 cell_type GM12878 biosample_type Cell line biosample_term_id EFO:0002784 tissue_category Blood encode_experiment_id ENCSR347NOB biological_replicate 1, 3 technical_replicate 1_1, 3_1 antibody CEBPZ assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 1,820 downloaded_date 07/10/2024 release_date 03/02/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF639KLW_TGGTTACATAATGTGYGGRGTTGTGCRCC_sorted.bed.gz processed_file_md5 ab5b085f144f637f1047227fc2e81f45 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF639KLW_TGGTTACATAATGTGYGGRGTTGTGCRCC_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF639KLW_TGGTTACATAATGTGYGGRGTTGTGCRCC_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF639KLW_TGGTTACATAATGTGYGGRGTTGTGCRCC.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF639KLW_TGGTTACATAATGTGYGGRGTTGTGCRCC.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 09f69a9374023514ceb666b43637115d data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens GM12878;Original_cell_type=GM12878;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF639KLW;ENCODE_bigBed_id=ENCFF932XBQ;PMID=34755879;Motif_sequence=TGGTTACATAATGTGYGGRGTTGTGCRCC;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002784;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name Factorbook GM12878 (repl. 1, 3) Motif finding CEBPZ transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR347NOB] [TFBS]
CEBPZ • GM12878 NGFTBFSGXOIPMX • Factorbook34755879 Motif finding GM12878 TFBS Show metadata Download track Track metadata identifier NGFTBFSGXOIPMX data_source Factorbook Download track Download number_of_intervals 39 bp_covered 1,131 output_type transcription factor binding sites significant genome_build hg38 cell_type GM12878 biosample_type Cell line biosample_term_id EFO:0002784 tissue_category Blood encode_experiment_id ENCSR347NOB biological_replicate 1, 3 technical_replicate 1_1, 3_1 antibody CEBPZ assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 1,209 downloaded_date 07/10/2024 release_date 03/02/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF639KLW_TGGTTACATAATGTGYGGRGTTGTGCRCC_filtered.bed.gz processed_file_md5 bd40a2d4f18b5244f8899c4e30217bd7 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF639KLW_TGGTTACATAATGTGYGGRGTTGTGCRCC_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF639KLW_TGGTTACATAATGTGYGGRGTTGTGCRCC_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF639KLW_TGGTTACATAATGTGYGGRGTTGTGCRCC.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF639KLW_TGGTTACATAATGTGYGGRGTTGTGCRCC.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 09f69a9374023514ceb666b43637115d data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens GM12878;Original_cell_type=GM12878;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF639KLW;ENCODE_bigBed_id=ENCFF932XBQ;PMID=34755879;Motif_sequence=TGGTTACATAATGTGYGGRGTTGTGCRCC;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002784;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name Factorbook GM12878 (repl. 1, 3) Motif finding CEBPZ transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR347NOB] [TFBS]
CEBPZ • K562 NGFTBGDIJN7IEM • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBGDIJN7IEM data_source Factorbook Download track Download number_of_intervals 1,909 bp_covered 26,726 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR618GDK biological_replicate 1, 4 technical_replicate 1_1, 4_1 antibody CEBPZ assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 32,121 downloaded_date 07/10/2024 release_date 07/07/2014 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF588GNU_HRGBCCCGCCYCYY_sorted.bed.gz processed_file_md5 ae0ac111efa890c6b4a5afef67af3626 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF588GNU_HRGBCCCGCCYCYY_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF588GNU_HRGBCCCGCCYCYY_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF588GNU_HRGBCCCGCCYCYY.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF588GNU_HRGBCCCGCCYCYY.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 e2895f3e66ccda687ca04757ab34744a data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF588GNU;ENCODE_bigBed_id=ENCFF909BYC;PMID=34755879;Motif_sequence=HRGBCCCGCCYCYY;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 4) Motif finding CEBPZ transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR618GDK] [Life stage: Adult] [TFBS]
CEBPZ • K562 NGFTBI7SY7KMIX • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBI7SY7KMIX data_source Factorbook Download track Download number_of_intervals 24 bp_covered 720 output_type transcription factor binding sites significant genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR618GDK biological_replicate 1, 4 technical_replicate 1_1, 4_1 antibody CEBPZ assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 922 downloaded_date 07/10/2024 release_date 07/07/2014 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF588GNU_ACWCMGRCCCAGYGGATTAACATCCARARR_filtered.bed.gz processed_file_md5 7bf1b1ce7ed8b1f1aeb3a41d7f3f14ab wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF588GNU_ACWCMGRCCCAGYGGATTAACATCCARARR_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF588GNU_ACWCMGRCCCAGYGGATTAACATCCARARR_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF588GNU_ACWCMGRCCCAGYGGATTAACATCCARARR.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF588GNU_ACWCMGRCCCAGYGGATTAACATCCARARR.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 49bf63d0602015a5ab45786b55711925 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF588GNU;ENCODE_bigBed_id=ENCFF909BYC;PMID=34755879;Motif_sequence=ACWCMGRCCCAGYGGATTAACATCCARARR;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 4) Motif finding CEBPZ transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR618GDK] [Life stage: Adult] [TFBS]
CEBPZ • K562 NGFTBIGS6ZSZPN • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBIGS6ZSZPN data_source Factorbook Download track Download number_of_intervals 286 bp_covered 5,720 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR618GDK biological_replicate 1, 4 technical_replicate 1_1, 4_1 antibody CEBPZ assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 5,557 downloaded_date 07/10/2024 release_date 07/07/2014 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF588GNU_YRAAACCATTTTTTCCTCCT_sorted.bed.gz processed_file_md5 0ca13e2ec49dc27330121943933f04e9 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF588GNU_YRAAACCATTTTTTCCTCCT_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF588GNU_YRAAACCATTTTTTCCTCCT_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF588GNU_YRAAACCATTTTTTCCTCCT.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF588GNU_YRAAACCATTTTTTCCTCCT.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 5db01cb00f2dfcb3aa43727b246f068f data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF588GNU;ENCODE_bigBed_id=ENCFF909BYC;PMID=34755879;Motif_sequence=YRAAACCATTTTTTCCTCCT;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 4) Motif finding CEBPZ transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR618GDK] [Life stage: Adult] [TFBS]
CEBPZ • GM12878 NGFTBJ6RO6MSYU • Factorbook34755879 Motif finding GM12878 TFBS Show metadata Download track Track metadata identifier NGFTBJ6RO6MSYU data_source Factorbook Download track Download number_of_intervals 44 bp_covered 924 output_type transcription factor binding sites significant genome_build hg38 cell_type GM12878 biosample_type Cell line biosample_term_id EFO:0002784 tissue_category Blood encode_experiment_id ENCSR347NOB biological_replicate 1, 3 technical_replicate 1_1, 3_1 antibody CEBPZ assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 1,090 downloaded_date 07/10/2024 release_date 03/02/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF639KLW_ACTCAGCWGGTTTGGAGTGCA_filtered.bed.gz processed_file_md5 2b40b8a2d14ccb06b593cbf9b095faaa wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF639KLW_ACTCAGCWGGTTTGGAGTGCA_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF639KLW_ACTCAGCWGGTTTGGAGTGCA_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF639KLW_ACTCAGCWGGTTTGGAGTGCA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF639KLW_ACTCAGCWGGTTTGGAGTGCA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 50a71bd2b501363923b63009debee05d data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens GM12878;Original_cell_type=GM12878;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF639KLW;ENCODE_bigBed_id=ENCFF932XBQ;PMID=34755879;Motif_sequence=ACTCAGCWGGTTTGGAGTGCA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002784;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name Factorbook GM12878 (repl. 1, 3) Motif finding CEBPZ transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR347NOB] [TFBS]
CEBPZ • K562 NGFTBNG7K3CCEV • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBNG7K3CCEV data_source Factorbook Download track Download number_of_intervals 637 bp_covered 19,110 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR618GDK biological_replicate 1, 4 technical_replicate 1_1, 4_1 antibody CEBPZ assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 14,972 downloaded_date 07/10/2024 release_date 07/07/2014 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF588GNU_AYRRMKCAGCRGGDYYSKRGKSCWGGCSCA_sorted.bed.gz processed_file_md5 7adaa5b4bafb72d1e25545ad09a53c25 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF588GNU_AYRRMKCAGCRGGDYYSKRGKSCWGGCSCA_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF588GNU_AYRRMKCAGCRGGDYYSKRGKSCWGGCSCA_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF588GNU_AYRRMKCAGCRGGDYYSKRGKSCWGGCSCA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF588GNU_AYRRMKCAGCRGGDYYSKRGKSCWGGCSCA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 c5a48918f8af89d82337f0661ca54794 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF588GNU;ENCODE_bigBed_id=ENCFF909BYC;PMID=34755879;Motif_sequence=AYRRMKCAGCRGGDYYSKRGKSCWGGCSCA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 4) Motif finding CEBPZ transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR618GDK] [Life stage: Adult] [TFBS]
CEBPZ • GM12878 NGFTBOYWY2OENS • Factorbook34755879 Motif finding GM12878 TFBS Show metadata Download track Track metadata identifier NGFTBOYWY2OENS data_source Factorbook Download track Download number_of_intervals 126 bp_covered 2,646 output_type transcription factor binding sites all genome_build hg38 cell_type GM12878 biosample_type Cell line biosample_term_id EFO:0002784 tissue_category Blood encode_experiment_id ENCSR347NOB biological_replicate 1, 3 technical_replicate 1_1, 3_1 antibody CEBPZ assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 2,930 downloaded_date 07/10/2024 release_date 03/02/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF639KLW_ACTCAGCWGGTTTGGAGTGCA_sorted.bed.gz processed_file_md5 3c4cf873308a9a9cde66dcb2faf492db wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF639KLW_ACTCAGCWGGTTTGGAGTGCA_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF639KLW_ACTCAGCWGGTTTGGAGTGCA_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF639KLW_ACTCAGCWGGTTTGGAGTGCA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF639KLW_ACTCAGCWGGTTTGGAGTGCA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 50a71bd2b501363923b63009debee05d data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens GM12878;Original_cell_type=GM12878;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF639KLW;ENCODE_bigBed_id=ENCFF932XBQ;PMID=34755879;Motif_sequence=ACTCAGCWGGTTTGGAGTGCA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002784;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name Factorbook GM12878 (repl. 1, 3) Motif finding CEBPZ transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR347NOB] [TFBS]
CEBPZ • GM12878 NGFTBPHXFGXWJM • Factorbook34755879 Motif finding GM12878 TFBS Show metadata Download track Track metadata identifier NGFTBPHXFGXWJM data_source Factorbook Download track Download number_of_intervals 1,220 bp_covered 17,080 output_type transcription factor binding sites all genome_build hg38 cell_type GM12878 biosample_type Cell line biosample_term_id EFO:0002784 tissue_category Blood encode_experiment_id ENCSR347NOB biological_replicate 1, 3 technical_replicate 1_1, 3_1 antibody CEBPZ assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 20,221 downloaded_date 07/10/2024 release_date 03/02/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF639KLW_YTCYSATTGGYYRN_sorted.bed.gz processed_file_md5 424387fb6d1a7d6618b7edf4fb10fae4 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF639KLW_YTCYSATTGGYYRN_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF639KLW_YTCYSATTGGYYRN_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF639KLW_YTCYSATTGGYYRN.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF639KLW_YTCYSATTGGYYRN.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 5d113c4638a0257b22982b2c1717bb7e data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens GM12878;Original_cell_type=GM12878;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF639KLW;ENCODE_bigBed_id=ENCFF932XBQ;PMID=34755879;Motif_sequence=YTCYSATTGGYYRN;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002784;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name Factorbook GM12878 (repl. 1, 3) Motif finding CEBPZ transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR347NOB] [TFBS]
CEBPZ • GM12878 NGFTBUXUHOETHY • Factorbook34755879 Motif finding GM12878 TFBS Show metadata Download track Track metadata identifier NGFTBUXUHOETHY data_source Factorbook Download track Download number_of_intervals 1,953 bp_covered 29,295 output_type transcription factor binding sites all genome_build hg38 cell_type GM12878 biosample_type Cell line biosample_term_id EFO:0002784 tissue_category Blood encode_experiment_id ENCSR347NOB biological_replicate 1, 3 technical_replicate 1_1, 3_1 antibody CEBPZ assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 33,167 downloaded_date 07/10/2024 release_date 03/02/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF639KLW_BHRGBCCCGCCYCYY_sorted.bed.gz processed_file_md5 2fd2efa9f56bbe78323fb44e78fa64d0 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF639KLW_BHRGBCCCGCCYCYY_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF639KLW_BHRGBCCCGCCYCYY_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF639KLW_BHRGBCCCGCCYCYY.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF639KLW_BHRGBCCCGCCYCYY.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 d04558f889779a14504607eb3bce61d7 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens GM12878;Original_cell_type=GM12878;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF639KLW;ENCODE_bigBed_id=ENCFF932XBQ;PMID=34755879;Motif_sequence=BHRGBCCCGCCYCYY;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002784;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name Factorbook GM12878 (repl. 1, 3) Motif finding CEBPZ transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR347NOB] [TFBS]
CEBPZ • K562 NGFTBX4RF73PDL • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBX4RF73PDL data_source Factorbook Download track Download number_of_intervals 92 bp_covered 2,760 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR618GDK biological_replicate 1, 4 technical_replicate 1_1, 4_1 antibody CEBPZ assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 2,635 downloaded_date 07/10/2024 release_date 07/07/2014 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF588GNU_ACWCMGRCCCAGYGGATTAACATCCARARR_sorted.bed.gz processed_file_md5 9b40d1ad30f84a495ac37deeb5ad2263 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF588GNU_ACWCMGRCCCAGYGGATTAACATCCARARR_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF588GNU_ACWCMGRCCCAGYGGATTAACATCCARARR_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF588GNU_ACWCMGRCCCAGYGGATTAACATCCARARR.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF588GNU_ACWCMGRCCCAGYGGATTAACATCCARARR.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 49bf63d0602015a5ab45786b55711925 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF588GNU;ENCODE_bigBed_id=ENCFF909BYC;PMID=34755879;Motif_sequence=ACWCMGRCCCAGYGGATTAACATCCARARR;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 4) Motif finding CEBPZ transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR618GDK] [Life stage: Adult] [TFBS]
CEBPZ • K562 NGFTBXJK44L3ZW • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBXJK44L3ZW data_source Factorbook Download track Download number_of_intervals 1,085 bp_covered 16,275 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR618GDK biological_replicate 1, 4 technical_replicate 1_1, 4_1 antibody CEBPZ assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 18,666 downloaded_date 07/10/2024 release_date 07/07/2014 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF588GNU_YVDCCAATSRVARGS_sorted.bed.gz processed_file_md5 2693292a732d72981e8b902946d8f8a0 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF588GNU_YVDCCAATSRVARGS_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF588GNU_YVDCCAATSRVARGS_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF588GNU_YVDCCAATSRVARGS.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF588GNU_YVDCCAATSRVARGS.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 9be64a39a89c39c631e3ec33fd9620eb data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF588GNU;ENCODE_bigBed_id=ENCFF909BYC;PMID=34755879;Motif_sequence=YVDCCAATSRVARGS;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 4) Motif finding CEBPZ transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR618GDK] [Life stage: Adult] [TFBS]
Reference annotation (CellCycle) NGHOMJ4J36WVCC • HOMER20513432 Motif finding Reference annotation (CellCycle) TFBS Show metadata Download track Track metadata identifier NGHOMJ4J36WVCC data_source HOMER Download track Download number_of_intervals 16,643 bp_covered 199,716 output_type transcription factor binding sites genome_build hg38 cell_type Not applicable biosample_type Not applicable biosample_term_id Not applicable tissue_category Not applicable encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody CellCycle assay Motif finding file_format bed bed6+5 Homer file_size 186,346 downloaded_date 08/12/2023 release_date 10/19/2020 date_added_to_filer 12/19/2025 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Homer/bed11/hg38/E2F_E2F.hg38.processed.bed.gz processed_file_md5 6fb350d612fd7f865d624bd4f12cc38b wget_command wget https://filer2.niagads.org/Annotationtracks/Homer/bed11/hg38/E2F_E2F.hg38.processed.bed.gz -P GADB/Annotationtracks/Homer/bed11/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Homer/bed11/hg38/E2F_E2F.hg38.processed.bed.gz.tbi -P GADB/Annotationtracks/Homer/bed11/hg38/ link_out_url https://homer.ucsd.edu/homer/ raw_file_url https://homer.ucsd.edu/homer/data/motifs/homer.KnownMotifs.hg38.191020.bed.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/Homer/homer.KnownMotifs.hg38.191020.bed.gz -P GADB/Annotationtracks/Downloads/Homer/ raw_file_md5 7f59c5d4bbf50fea7476a173961ea174 data_category TFBS [Transcription Factor Binding Site] Genomic feature type HOMER transcription factor binding sites track_description version=191020;TF_name=E2F;DNA_binding_domain=E2F;Cell_type=Hela;Assay=Expression;Origin=Not applicable;schema=BED6+5;dataSource_pubmed_id=20513432;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/HOMER.html;original_biosample_term_id=Not applicable;is_hg38_lifted=no system_category Not applicable life_stage Not applicable track_name HOMER Motif finding CellCycle transcription factor binding sites (bed6+5 Homer) [TFBS]
Reference annotation (CellCycle) NGHOMPOFZQO74P • HOMER20513432 Motif finding Reference annotation (CellCycle) TFBS Show metadata Download track Track metadata identifier NGHOMPOFZQO74P data_source HOMER Download track Download number_of_intervals 1,807,276 bp_covered 18,072,760 output_type transcription factor binding sites genome_build hg38 cell_type Not applicable biosample_type Not applicable biosample_term_id Not applicable tissue_category Not applicable encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody CellCycle assay Motif finding file_format bed bed6+5 Homer file_size 16,761,066 downloaded_date 08/12/2023 release_date 10/19/2020 date_added_to_filer 12/19/2025 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Homer/bed11/hg38/CHR.hg38.processed.bed.gz processed_file_md5 38c0809e24b3cc4f638b3ae9ab84b509 wget_command wget https://filer2.niagads.org/Annotationtracks/Homer/bed11/hg38/CHR.hg38.processed.bed.gz -P GADB/Annotationtracks/Homer/bed11/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Homer/bed11/hg38/CHR.hg38.processed.bed.gz.tbi -P GADB/Annotationtracks/Homer/bed11/hg38/ link_out_url https://homer.ucsd.edu/homer/ raw_file_url https://homer.ucsd.edu/homer/data/motifs/homer.KnownMotifs.hg38.191020.bed.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/Homer/homer.KnownMotifs.hg38.191020.bed.gz -P GADB/Annotationtracks/Downloads/Homer/ raw_file_md5 7f59c5d4bbf50fea7476a173961ea174 data_category TFBS [Transcription Factor Binding Site] Genomic feature type HOMER transcription factor binding sites track_description version=191020;TF_name=CHR;DNA_binding_domain=Not applicable;Cell_type=Hela;Assay=Expression;Origin=Not applicable;schema=BED6+5;dataSource_pubmed_id=20513432;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/HOMER.html;original_biosample_term_id=Not applicable;is_hg38_lifted=no system_category Not applicable life_stage Not applicable track_name HOMER Motif finding CellCycle transcription factor binding sites (bed6+5 Homer) [TFBS]
CENPBD1 • HepG2 NGENCB4JEKCB6E • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq HepG2 TF Show metadata Download track Track metadata identifier NGENCB4JEKCB6E data_source ENCODE Download track Download number_of_intervals 3,300 bp_covered 2,133,770 output_type IDR thresholded peaks genome_build hg38 cell_type HepG2 biosample_type Cell line biosample_term_id EFO:0001187 tissue_category Liver encode_experiment_id ENCSR539PMH biological_replicate 1 technical_replicate 1_1 antibody CENPBD1 assay TF ChIP-seq file_format bed narrowPeak file_size 61,445 downloaded_date 05/15/2024 release_date 05/25/2022 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF644NNL.bed.gz processed_file_md5 fb66f8cc07e348ee411bf73f8d20420e wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF644NNL.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF644NNL.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF644NNL/@@download/ENCFF644NNL.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF644NNL.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 6420b635f2ce09ab7d269d587f7b12b8 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens CENPBD1;Lab=Richard Myers, HAIB;ENCODE_internal_tags=RegulomeDB_2_2,RegulomeDB_2_1;Life_stage_age=child 15 years;Reference=NR;External_resources=GEO:GSE231277;Project=ENCODE;Award=UM1HG009411;Experiment_date_released=2022-07-15,2020-06-26,2020-08-14;Submitted_track_name=rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=HepG2;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_system_slims=exocrine system,endocrine system,digestive system;ENCODE_biosample_term_synonyms=Hep-G2,HepG2 cell;Analysis_title=ENCODE4 v1.8.0 GRCh38;GM=[Method:CRISPR|Category:insertion];schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001187;is_hg38_lifted=no system_category Digestive life_stage Child track_name ENCODE HepG2 (repl. 1) TF ChIP-seq CENPBD1 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR539PMH] [Life stage: Child] [TF ChIP-seq peaks]
CENPBD1 • HepG2 NGENCM2DSWPUDK • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq HepG2 TF Show metadata Download track Track metadata identifier NGENCM2DSWPUDK data_source ENCODE Download track Download number_of_intervals 738 bp_covered 365,797 output_type IDR thresholded peaks genome_build hg38 cell_type HepG2 biosample_type Cell line biosample_term_id EFO:0001187 tissue_category Liver encode_experiment_id ENCSR539PMH biological_replicate 2 technical_replicate 2_1 antibody CENPBD1 assay TF ChIP-seq file_format bed narrowPeak file_size 15,162 downloaded_date 05/15/2024 release_date 05/25/2022 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF681SGH.bed.gz processed_file_md5 ce54c45db4a4780c4a2f02442a8634bf wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF681SGH.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF681SGH.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF681SGH/@@download/ENCFF681SGH.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF681SGH.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 3d35b0f6c4d17872466bd1de00aa3acd data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens CENPBD1;Lab=Richard Myers, HAIB;ENCODE_internal_tags=RegulomeDB_2_2,RegulomeDB_2_1;Life_stage_age=child 15 years;Reference=NR;External_resources=GEO:GSE231277;Project=ENCODE;Award=UM1HG009411;Experiment_date_released=2022-07-15,2020-06-26,2020-08-14;Submitted_track_name=rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=HepG2;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_system_slims=exocrine system,endocrine system,digestive system;ENCODE_biosample_term_synonyms=Hep-G2,HepG2 cell;Analysis_title=ENCODE4 v1.8.0 GRCh38;GM=[Method:CRISPR|Category:insertion];schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001187;is_hg38_lifted=no system_category Digestive life_stage Child track_name ENCODE HepG2 (repl. 2) TF ChIP-seq CENPBD1 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR539PMH] [Life stage: Child] [TF ChIP-seq peaks]
CENPBD1 • HepG2 NGENCQU6NF6LJG • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq HepG2 TF Show metadata Download track Track metadata identifier NGENCQU6NF6LJG data_source ENCODE Download track Download number_of_intervals 2,722 bp_covered 1,439,526 output_type IDR thresholded peaks genome_build hg38 cell_type HepG2 biosample_type Cell line biosample_term_id EFO:0001187 tissue_category Liver encode_experiment_id ENCSR539PMH biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CENPBD1 assay TF ChIP-seq file_format bed narrowPeak file_size 55,390 downloaded_date 05/15/2024 release_date 05/25/2022 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF704PVQ.bed.gz processed_file_md5 fe1d5b60ee9a5134b0e285d3b9227d52 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF704PVQ.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF704PVQ.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF704PVQ/@@download/ENCFF704PVQ.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF704PVQ.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 39c716435824b198594e66716231b440 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens CENPBD1;Lab=Richard Myers, HAIB;ENCODE_internal_tags=RegulomeDB_2_2,RegulomeDB_2_1;Life_stage_age=child 15 years;Reference=NR;External_resources=GEO:GSE231277;Project=ENCODE;Award=UM1HG009411;Experiment_date_released=2022-07-15,2020-06-26,2020-08-14;Submitted_track_name=pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=HepG2;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_system_slims=exocrine system,endocrine system,digestive system;ENCODE_biosample_term_synonyms=Hep-G2,HepG2 cell;Analysis_title=ENCODE4 v1.8.0 GRCh38;GM=[Method:CRISPR|Category:insertion];schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001187;is_hg38_lifted=no system_category Digestive life_stage Child track_name ENCODE HepG2 (repl. 1, 2) TF ChIP-seq CENPBD1 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR539PMH] [Life stage: Child] [TF ChIP-seq peaks]
CENPBD1 • HepG2 NGENCW3ITEZ256 • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq HepG2 TF Show metadata Download track Track metadata identifier NGENCW3ITEZ256 data_source ENCODE Download track Download number_of_intervals 1,365 bp_covered 720,316 output_type conservative IDR thresholded peaks genome_build hg38 cell_type HepG2 biosample_type Cell line biosample_term_id EFO:0001187 tissue_category Liver encode_experiment_id ENCSR539PMH biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CENPBD1 assay TF ChIP-seq file_format bed narrowPeak file_size 28,064 downloaded_date 05/15/2024 release_date 05/25/2022 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF323PWB.bed.gz processed_file_md5 855af83a58392e97c22b279c95bc6fb0 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF323PWB.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF323PWB.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF323PWB/@@download/ENCFF323PWB.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF323PWB.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 25cc99656485e7e68d2c03202ca23ede data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq conservative IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens CENPBD1;Lab=Richard Myers, HAIB;ENCODE_internal_tags=RegulomeDB_2_2,RegulomeDB_2_1;Life_stage_age=child 15 years;Reference=NR;External_resources=GEO:GSE231277;Project=ENCODE;Award=UM1HG009411;Experiment_date_released=2022-07-15,2020-06-26,2020-08-14;Submitted_track_name=rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=HepG2;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_system_slims=exocrine system,endocrine system,digestive system;ENCODE_biosample_term_synonyms=Hep-G2,HepG2 cell;Analysis_title=ENCODE4 v1.8.0 GRCh38;GM=[Method:CRISPR|Category:insertion];schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001187;is_hg38_lifted=no system_category Digestive life_stage Child track_name ENCODE HepG2 (repl. 1, 2) TF ChIP-seq CENPBD1 conservative IDR thresholded peaks (narrowPeak) [Experiment: ENCSR539PMH] [Life stage: Child] [TF ChIP-seq peaks]