H3K4me1 • Mobilized CD34+ NGRMPB44PX7P6B • ROADMAP25693563 ChIP-seq Mobilized CD34+ Histone Show metadata Download track Track metadata identifier NGRMPB44PX7P6B data_source ROADMAP Download track Download number_of_intervals 85,222 bp_covered 312,504,152 output_type peaks genome_build hg38 cell_type Mobilized CD34+ biosample_type Primary cell biosample_term_id CL:0000037 tissue_category Blood encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed gappedPeak-lifted file_size 4,802,192 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/28/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.Mobilized_CD34_Primary_Cells.H3K4me1.RO_01536.gappedPeak.lifted.bed.gz processed_file_md5 4c6e46c1c893e46c160b15ff44af9570 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.Mobilized_CD34_Primary_Cells.H3K4me1.RO_01536.gappedPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.Mobilized_CD34_Primary_Cells.H3K4me1.RO_01536.gappedPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/gappedPeak/BI.Mobilized_CD34_Primary_Cells.H3K4me1.RO_01536.gappedPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/gappedpeak/BI.Mobilized_CD34_Primary_Cells.H3K4me1.RO_01536.gappedPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/gappedpeak/ raw_file_md5 d42862998263afd6c64a3bf11afd5ca8 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=2015;Original_cell_type=Mobilized CD34 Primary Cells;Donor=RO_01536;schema=BED3+15;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Cardiovascular life_stage Unknown track_name ROADMAP Mobilized CD34+ ChIP-seq H3K4me1-histone-mark peaks (gappedPeak-lifted) [Histone ChIP-seq peaks]
H3K4me1 • Adipocyte NGRMPB46JSTL5T • ROADMAP25693563 ChIP-seq Adipocyte Histone Show metadata Download track Track metadata identifier NGRMPB46JSTL5T data_source ROADMAP Download track Download number_of_intervals 362,328 bp_covered 544,660,982 output_type peaks genome_build hg38 cell_type Adipocyte biosample_type In vitro differentiated cells biosample_term_id CL:0000136 tissue_category Stem Cell encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed broadPeak-lifted file_size 12,155,315 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/27/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/BI.Mesenchymal_Stem_Cell_Derived_Adipocyte_Cultured_Cells.H3K4me1.93.broadPeak.lifted.bed.gz processed_file_md5 03e547c59135ed5e0f4d6b29ff618c3c wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/BI.Mesenchymal_Stem_Cell_Derived_Adipocyte_Cultured_Cells.H3K4me1.93.broadPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/BI.Mesenchymal_Stem_Cell_Derived_Adipocyte_Cultured_Cells.H3K4me1.93.broadPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/broadPeak/BI.Mesenchymal_Stem_Cell_Derived_Adipocyte_Cultured_Cells.H3K4me1.93.broadPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/broadpeak/BI.Mesenchymal_Stem_Cell_Derived_Adipocyte_Cultured_Cells.H3K4me1.93.broadPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/broadpeak/ raw_file_md5 215ae445412fd45cd38c9c99db91fd2b data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=2015;Original_cell_type=Mesenchymal Stem Cell Derived Adipocyte Cultured Cells;Donor=93;schema=BED3+9;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Stem Cell life_stage Unknown track_name ROADMAP Adipocyte ChIP-seq H3K4me1-histone-mark peaks (broadPeak-lifted) [Histone ChIP-seq peaks]
H3K4me1 • Muscle NGRMPB5W3NZ5G6 • ROADMAP25693563 ChIP-seq Muscle Histone Show metadata Download track Track metadata identifier NGRMPB5W3NZ5G6 data_source ROADMAP Download track Download number_of_intervals 229,917 bp_covered 371,306,224 output_type peaks genome_build hg38 cell_type Muscle biosample_type Primary tissue biosample_term_id NCIT:C13056 tissue_category Skeletal Muscle encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed broadPeak-lifted file_size 7,842,614 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/27/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/UW.Fetal_Muscle_Leg.H3K4me1.H-24644.Histone.DS22558.broadPeak.lifted.bed.gz processed_file_md5 a7bd86970caab047928d20e0e8d91293 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/UW.Fetal_Muscle_Leg.H3K4me1.H-24644.Histone.DS22558.broadPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/UW.Fetal_Muscle_Leg.H3K4me1.H-24644.Histone.DS22558.broadPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/broadPeak/UW.Fetal_Muscle_Leg.H3K4me1.H-24644.Histone.DS22558.broadPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/broadpeak/UW.Fetal_Muscle_Leg.H3K4me1.H-24644.Histone.DS22558.broadPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/broadpeak/ raw_file_md5 802782b5acec420d67e19164b7660abc data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=2015;Original_cell_type=Fetal Muscle Leg;Donor=H-24644.Histone.DS22558;schema=BED3+9;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Muscular life_stage Fetal track_name ROADMAP Muscle ChIP-seq H3K4me1-histone-mark peaks (broadPeak-lifted) [Life stage: Fetal] [Histone ChIP-seq peaks]
H3K4me1 • Skeletal muscle NGRMPB6VXPJL3H • ROADMAP25693563 ChIP-seq Skeletal muscle Histone Show metadata Download track Track metadata identifier NGRMPB6VXPJL3H data_source ROADMAP Download track Download number_of_intervals 94,178 bp_covered 390,152,914 output_type peaks genome_build hg38 cell_type Skeletal muscle biosample_type Primary tissue biosample_term_id BTO:0001103 tissue_category Skeletal Muscle encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed gappedPeak-lifted file_size 5,568,325 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/28/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.Skeletal_Muscle.H3K4me1.62.gappedPeak.lifted.bed.gz processed_file_md5 b641d3b980ce12b6356335e11ba77bcc wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.Skeletal_Muscle.H3K4me1.62.gappedPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.Skeletal_Muscle.H3K4me1.62.gappedPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/gappedPeak/BI.Skeletal_Muscle.H3K4me1.62.gappedPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/gappedpeak/BI.Skeletal_Muscle.H3K4me1.62.gappedPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/gappedpeak/ raw_file_md5 a67c7a36a1b3dc93559f466b8f6c5414 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=2015;Original_cell_type=Skeletal Muscle;Donor=62;schema=BED3+15;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Muscular life_stage Unknown track_name ROADMAP Skeletal muscle ChIP-seq H3K4me1-histone-mark peaks (gappedPeak-lifted) [Histone ChIP-seq peaks]
H3K4me1 • Esophagus NGRMPB7LORJCXP • ROADMAP25693563 ChIP-seq Esophagus Histone Show metadata Download track Track metadata identifier NGRMPB7LORJCXP data_source ROADMAP Download track Download number_of_intervals 430,799 bp_covered 437,492,255 output_type peaks genome_build hg38 cell_type Esophagus biosample_type Primary tissue biosample_term_id NCIT:C12389 tissue_category Digestive encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed broadPeak-lifted file_size 14,238,264 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/27/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/UCSD.Esophagus.H3K4me1.STL002.broadPeak.lifted.bed.gz processed_file_md5 183d6f74dc14443ff1ea176ae4c2187a wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/UCSD.Esophagus.H3K4me1.STL002.broadPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/UCSD.Esophagus.H3K4me1.STL002.broadPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/broadPeak/UCSD.Esophagus.H3K4me1.STL002.broadPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/broadpeak/UCSD.Esophagus.H3K4me1.STL002.broadPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/broadpeak/ raw_file_md5 7e454f1787d856c7bbcdc9d94cfbd164 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=2015;Original_cell_type=Esophagus;Donor=STL002;schema=BED3+9;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Digestive life_stage Unknown track_name ROADMAP Esophagus ChIP-seq H3K4me1-histone-mark peaks (broadPeak-lifted) [Histone ChIP-seq peaks]
H3K4me1 • Hippocampus middle NGRMPB7PD2VO25 • ROADMAP25693563 ChIP-seq Hippocampus middle Histone Show metadata Download track Track metadata identifier NGRMPB7PD2VO25 data_source ROADMAP Download track Download number_of_intervals 92,889 bp_covered 233,328,949 output_type peaks genome_build hg38 cell_type Hippocampus middle biosample_type Primary tissue biosample_term_id UBERON:0001954 tissue_category Brain encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed gappedPeak-lifted file_size 5,063,141 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/28/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.Brain_Hippocampus_Middle.H3K4me1.112.gappedPeak.lifted.bed.gz processed_file_md5 e715cd840752f5ff563491046e22079c wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.Brain_Hippocampus_Middle.H3K4me1.112.gappedPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.Brain_Hippocampus_Middle.H3K4me1.112.gappedPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/gappedPeak/BI.Brain_Hippocampus_Middle.H3K4me1.112.gappedPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/gappedpeak/BI.Brain_Hippocampus_Middle.H3K4me1.112.gappedPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/gappedpeak/ raw_file_md5 fbd3a256259d22bb1f079c98abf1e59a data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=2015;Original_cell_type=Brain Hippocampus Middle;Donor=112;schema=BED3+15;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Nervous life_stage Unknown track_name ROADMAP Hippocampus middle ChIP-seq H3K4me1-histone-mark peaks (gappedPeak-lifted) [Histone ChIP-seq peaks]
H3K4me1 • Small intestine NGRMPB7XB37T64 • ROADMAP25693563 ChIP-seq Small intestine Histone Show metadata Download track Track metadata identifier NGRMPB7XB37T64 data_source ROADMAP Download track Download number_of_intervals 281,234 bp_covered 122,945,173 output_type peaks genome_build hg38 cell_type Small intestine biosample_type Primary tissue biosample_term_id UBERON:0002108 tissue_category Digestive encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed narrowPeak-lifted file_size 8,768,534 downloaded_date 08/15/2018 release_date 11/30/2014 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/UW.Fetal_Intestine_Small.H3K4me1.H-24595.Histone.DS22555.narrowPeak.lifted.bed.gz processed_file_md5 dcd6ab49acb0cbbae004989b4cbde90b wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/UW.Fetal_Intestine_Small.H3K4me1.H-24595.Histone.DS22555.narrowPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/UW.Fetal_Intestine_Small.H3K4me1.H-24595.Histone.DS22555.narrowPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/narrowPeak/UW.Fetal_Intestine_Small.H3K4me1.H-24595.Histone.DS22555.narrowPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/narrowpeak/UW.Fetal_Intestine_Small.H3K4me1.H-24595.Histone.DS22555.narrowPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/narrowpeak/ raw_file_md5 370d6e2c58cd057ee04bbc26fe55668c data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=2015;Original_cell_type=Fetal Intestine Small;Donor=H-24595.Histone.DS22555;schema=BED3+10;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Digestive life_stage Fetal track_name ROADMAP Small intestine ChIP-seq H3K4me1-histone-mark peaks (narrowPeak-lifted) [Life stage: Fetal] [Histone ChIP-seq peaks]
H3K4me1 • Mesenchymal stem cell NGRMPBADGXGLGV • ROADMAP25693563 ChIP-seq Mesenchymal stem cell Histone Show metadata Download track Track metadata identifier NGRMPBADGXGLGV data_source ROADMAP Download track Download number_of_intervals 330,016 bp_covered 174,597,114 output_type peaks genome_build hg38 cell_type Mesenchymal stem cell biosample_type Stem cell biosample_term_id CL:0000134 tissue_category Connective Tissue encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed narrowPeak-lifted file_size 10,702,126 downloaded_date 08/15/2018 release_date 11/30/2014 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/BI.Adipose_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K4me1.1.narrowPeak.lifted.bed.gz processed_file_md5 51d861c3182794e86c101dc302d012d9 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/BI.Adipose_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K4me1.1.narrowPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/BI.Adipose_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K4me1.1.narrowPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/narrowPeak/BI.Adipose_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K4me1.1.narrowPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/narrowpeak/BI.Adipose_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K4me1.1.narrowPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/narrowpeak/ raw_file_md5 c06aef1d6dd586b4532c05479fb2289f data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=2015;Original_cell_type=Adipose Derived Mesenchymal Stem Cell Cultured Cells;Donor=1;schema=BED3+10;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Skeletal life_stage Unknown track_name ROADMAP Mesenchymal stem cell ChIP-seq H3K4me1-histone-mark peaks (narrowPeak-lifted) [Histone ChIP-seq peaks]
H3K4me1 • CD8+ memory T cell NGRMPBIBJWO4WN • ROADMAP25693563 ChIP-seq CD8+ memory T cell Histone Show metadata Download track Track metadata identifier NGRMPBIBJWO4WN data_source ROADMAP Download track Download number_of_intervals 134,835 bp_covered 91,245,983 output_type peaks genome_build hg38 cell_type CD8+ memory T cell biosample_type Primary cell biosample_term_id NCIT:C201812 tissue_category Blood encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed narrowPeak-lifted file_size 4,317,296 downloaded_date 08/15/2018 release_date 11/30/2014 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/BI.CD8_Memory_Primary_Cells.H3K4me1.Donor_101_8_pooled_leukopaks_Jan_20_2011.narrowPeak.lifted.bed.gz processed_file_md5 26e5df7ae528bca4bb65d96d55722b5a wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/BI.CD8_Memory_Primary_Cells.H3K4me1.Donor_101_8_pooled_leukopaks_Jan_20_2011.narrowPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/BI.CD8_Memory_Primary_Cells.H3K4me1.Donor_101_8_pooled_leukopaks_Jan_20_2011.narrowPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/narrowPeak/BI.CD8_Memory_Primary_Cells.H3K4me1.Donor_101_8_pooled_leukopaks_Jan_20_2011.narrowPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/narrowpeak/BI.CD8_Memory_Primary_Cells.H3K4me1.Donor_101_8_pooled_leukopaks_Jan_20_2011.narrowPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/narrowpeak/ raw_file_md5 05f9a1b5020ddcd8a7dcd4b680c895bc data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=2015;Original_cell_type=CD8 Memory Primary Cells;Donor=101_8_pooled_leukopaks_Jan_20_2011;schema=BED3+10;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Cardiovascular life_stage Unknown track_name ROADMAP CD8+ memory T cell ChIP-seq H3K4me1-histone-mark peaks (narrowPeak-lifted) [Histone ChIP-seq peaks]
H3K4me1 • Pancreatic islets NGRMPBJ3MR6RO7 • ROADMAP25693563 ChIP-seq Pancreatic islets Histone Show metadata Download track Track metadata identifier NGRMPBJ3MR6RO7 data_source ROADMAP Download track Download number_of_intervals 123,664 bp_covered 351,050,233 output_type peaks genome_build hg38 cell_type Pancreatic islets biosample_type Primary tissue biosample_term_id UBERON:0000006 tissue_category Pancreas encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed gappedPeak-lifted file_size 7,022,086 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/28/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSF-UBC.Pancreatic_Islets.H3K4me1.ZGI_213.gappedPeak.lifted.bed.gz processed_file_md5 abe8e27650ad5dc3a0313971d18d0e27 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSF-UBC.Pancreatic_Islets.H3K4me1.ZGI_213.gappedPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSF-UBC.Pancreatic_Islets.H3K4me1.ZGI_213.gappedPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/gappedPeak/UCSF-UBC.Pancreatic_Islets.H3K4me1.ZGI_213.gappedPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/gappedpeak/UCSF-UBC.Pancreatic_Islets.H3K4me1.ZGI_213.gappedPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/gappedpeak/ raw_file_md5 7bed410e9da4b05319a9eabf2e0956bf data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=2015;Original_cell_type=Pancreatic Islets;Donor=ZGI_213;schema=BED3+15;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Endocrine life_stage Unknown track_name ROADMAP Pancreatic islets ChIP-seq H3K4me1-histone-mark peaks (gappedPeak-lifted) [Histone ChIP-seq peaks]
H3K4me1 • iPS DF 6 NGRMPBJ75X4K7L • ROADMAP25693563 ChIP-seq iPS DF 6 Histone Show metadata Download track Track metadata identifier NGRMPBJ75X4K7L data_source ROADMAP Download track Download number_of_intervals 718,840 bp_covered 573,899,752 output_type peaks genome_build hg38 cell_type iPS DF 6 biosample_type Primary culture biosample_term_id CL:0002248 tissue_category iPSC encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed broadPeak-lifted file_size 23,465,076 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/27/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/UCSD.iPS_DF_6.9.H3K4me1.SK397.broadPeak.lifted.bed.gz processed_file_md5 4604c0fef1ce2b017bfa0a2c2d8f10ac wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/UCSD.iPS_DF_6.9.H3K4me1.SK397.broadPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/UCSD.iPS_DF_6.9.H3K4me1.SK397.broadPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/broadPeak/UCSD.iPS_DF_6.9.H3K4me1.SK397.broadPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/broadpeak/UCSD.iPS_DF_6.9.H3K4me1.SK397.broadPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/broadpeak/ raw_file_md5 ccdb085203a5fe9c23b770ecceac51de data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=2015;Original_cell_type=iPS DF 6;Donor=SK397;schema=BED3+9;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Stem Cell life_stage Unknown track_name ROADMAP iPS DF 6 ChIP-seq H3K4me1-histone-mark peaks (broadPeak-lifted) [Histone ChIP-seq peaks]
H3K4me1 • Spleen NGRMPBJY6R2QD3 • ROADMAP25693563 ChIP-seq Spleen Histone Show metadata Download track Track metadata identifier NGRMPBJY6R2QD3 data_source ROADMAP Download track Download number_of_intervals 573,982 bp_covered 615,703,693 output_type peaks genome_build hg38 cell_type Spleen biosample_type Primary tissue biosample_term_id UBERON:0002106 tissue_category Immune Organ encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed broadPeak-lifted file_size 19,040,044 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/27/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/UCSD.Spleen.H3K4me1.STL003.broadPeak.lifted.bed.gz processed_file_md5 b328dd5b361a17caff9397545010a2b0 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/UCSD.Spleen.H3K4me1.STL003.broadPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/UCSD.Spleen.H3K4me1.STL003.broadPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/broadPeak/UCSD.Spleen.H3K4me1.STL003.broadPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/broadpeak/UCSD.Spleen.H3K4me1.STL003.broadPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/broadpeak/ raw_file_md5 3b307080f4715f0a14cdb60a7215ac21 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=2015;Original_cell_type=Spleen;Donor=STL003;schema=BED3+9;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Lymphatic life_stage Unknown track_name ROADMAP Spleen ChIP-seq H3K4me1-histone-mark peaks (broadPeak-lifted) [Histone ChIP-seq peaks]
H3K4me1 • HUES64 NGRMPBKPFTTCIJ • ROADMAP25693563 ChIP-seq HUES64 Histone Show metadata Download track Track metadata identifier NGRMPBKPFTTCIJ data_source ROADMAP Download track Download number_of_intervals 141,033 bp_covered 416,383,221 output_type peaks genome_build hg38 cell_type HUES64 biosample_type Primary culture biosample_term_id EFO:0007089 tissue_category Embryo encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed gappedPeak-lifted file_size 7,707,103 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/28/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.HUES64.H3K4me1.Lib_MC_20101025_01--ChIP_MC_20101020_01_ES_cell_HUES_64_H3K4Me1.gappedPeak.lifted.bed.gz processed_file_md5 03b22387d05839711f103ec530646e2f wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.HUES64.H3K4me1.Lib_MC_20101025_01--ChIP_MC_20101020_01_ES_cell_HUES_64_H3K4Me1.gappedPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.HUES64.H3K4me1.Lib_MC_20101025_01--ChIP_MC_20101020_01_ES_cell_HUES_64_H3K4Me1.gappedPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/gappedPeak/BI.HUES64.H3K4me1.Lib_MC_20101025_01--ChIP_MC_20101020_01_ES_cell_HUES_64_H3K4Me1.gappedPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/gappedpeak/BI.HUES64.H3K4me1.Lib_MC_20101025_01--ChIP_MC_20101020_01_ES_cell_HUES_64_H3K4Me1.gappedPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/gappedpeak/ raw_file_md5 f0f6b0736232f4f155bc00150efe5761 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=2015;Original_cell_type=HUES64;Donor=Lib_MC_20101025_01--ChIP_MC_20101020_01_ES_cell_HUES_64_H3K4Me1;schema=BED3+15;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=EFO:0007089;is_hg38_lifted=yes system_category Embryo life_stage Embryonic track_name ROADMAP HUES64 ChIP-seq H3K4me1-histone-mark peaks (gappedPeak-lifted) [Life stage: Embryonic] [Histone ChIP-seq peaks]
H3K4me1 • Anterior caudate NGRMPBLGUCFXTT • ROADMAP25693563 ChIP-seq Anterior caudate Histone Show metadata Download track Track metadata identifier NGRMPBLGUCFXTT data_source ROADMAP Download track Download number_of_intervals 214,528 bp_covered 83,934,293 output_type peaks genome_build hg38 cell_type Anterior caudate biosample_type Primary tissue biosample_term_id UBERON:0001873 tissue_category Brain encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed narrowPeak-lifted file_size 6,400,100 downloaded_date 08/15/2018 release_date 11/30/2014 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/BI.Brain_Anterior_Caudate.H3K4me1.112.narrowPeak.lifted.bed.gz processed_file_md5 7bb1454e24fa301cbfc3fcb26e1b96d9 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/BI.Brain_Anterior_Caudate.H3K4me1.112.narrowPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/BI.Brain_Anterior_Caudate.H3K4me1.112.narrowPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/narrowPeak/BI.Brain_Anterior_Caudate.H3K4me1.112.narrowPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/narrowpeak/BI.Brain_Anterior_Caudate.H3K4me1.112.narrowPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/narrowpeak/ raw_file_md5 82453cc8b1a8c6d3a232213b084011f6 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=2015;Original_cell_type=Brain Anterior Caudate;Donor=112;schema=BED3+10;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Nervous life_stage Unknown track_name ROADMAP Anterior caudate ChIP-seq H3K4me1-histone-mark peaks (narrowPeak-lifted) [Histone ChIP-seq peaks]
H3K4me1 • CD4+ CD25- IL17- Th17 cell NGRMPBOD4QSEJ4 • ROADMAP25693563 ChIP-seq CD4+ CD25- IL17- Th17 cell Histone Show metadata Download track Track metadata identifier NGRMPBOD4QSEJ4 data_source ROADMAP Download track Download number_of_intervals 168,016 bp_covered 149,925,723 output_type peaks genome_build hg38 cell_type CD4+ CD25- IL17- Th17 cell biosample_type Primary cell biosample_term_id CL:0000899 tissue_category Blood encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed narrowPeak-lifted file_size 5,415,202 downloaded_date 08/15/2018 release_date 11/30/2014 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/BI.CD4+_CD25-_IL17-_PMA-Ionomycin_stimulated_MACS_purified_Th_Primary_Cells.H3K4me1.Donor_332.narrowPeak.lifted.bed.gz processed_file_md5 ef57166b5e05f29b0835f3c6a4ba78f3 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/BI.CD4+_CD25-_IL17-_PMA-Ionomycin_stimulated_MACS_purified_Th_Primary_Cells.H3K4me1.Donor_332.narrowPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/BI.CD4+_CD25-_IL17-_PMA-Ionomycin_stimulated_MACS_purified_Th_Primary_Cells.H3K4me1.Donor_332.narrowPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/narrowPeak/BI.CD4+_CD25-_IL17-_PMA-Ionomycin_stimulated_MACS_purified_Th_Primary_Cells.H3K4me1.Donor_332.narrowPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/narrowpeak/BI.CD4+_CD25-_IL17-_PMA-Ionomycin_stimulated_MACS_purified_Th_Primary_Cells.H3K4me1.Donor_332.narrowPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/narrowpeak/ raw_file_md5 4ee8cd840cb12aafe9b67c1808ed5a76 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=2015;Original_cell_type=CD4+ CD25- IL17- PMA-Ionomycin stimulated MACS purified Th Primary Cells;Donor=332;schema=BED3+10;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Cardiovascular life_stage Unknown track_name ROADMAP CD4+ CD25- IL17- Th17 cell ChIP-seq H3K4me1-histone-mark peaks (narrowPeak-lifted) [Histone ChIP-seq peaks]
H3K4me1 • Skeletal muscle NGRMPBP23IB3W5 • ROADMAP25693563 ChIP-seq Skeletal muscle Histone Show metadata Download track Track metadata identifier NGRMPBP23IB3W5 data_source ROADMAP Download track Download number_of_intervals 230,545 bp_covered 503,903,016 output_type peaks genome_build hg38 cell_type Skeletal muscle biosample_type Primary tissue biosample_term_id BTO:0001103 tissue_category Skeletal Muscle encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed broadPeak-lifted file_size 7,811,547 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/27/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/BI.Skeletal_Muscle.H3K4me1.62.broadPeak.lifted.bed.gz processed_file_md5 fa667c9a95972657f4eada0b70d84ea1 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/BI.Skeletal_Muscle.H3K4me1.62.broadPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/BI.Skeletal_Muscle.H3K4me1.62.broadPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/broadPeak/BI.Skeletal_Muscle.H3K4me1.62.broadPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/broadpeak/BI.Skeletal_Muscle.H3K4me1.62.broadPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/broadpeak/ raw_file_md5 9503fa63aef6e1efb4a125b0bd3f4004 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=2015;Original_cell_type=Skeletal Muscle;Donor=62;schema=BED3+9;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Muscular life_stage Unknown track_name ROADMAP Skeletal muscle ChIP-seq H3K4me1-histone-mark peaks (broadPeak-lifted) [Histone ChIP-seq peaks]
H3K4me1 • Mid frontal lobe NGRMPBP6ZABKVP • ROADMAP25693563 ChIP-seq Mid frontal lobe Histone Show metadata Download track Track metadata identifier NGRMPBP6ZABKVP data_source ROADMAP Download track Download number_of_intervals 282,006 bp_covered 632,517,201 output_type peaks genome_build hg38 cell_type Mid frontal lobe biosample_type Primary tissue biosample_term_id UBERON:0001870 tissue_category Brain encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed broadPeak-lifted file_size 9,486,433 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/27/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/BI.Brain_Mid_Frontal_Lobe.H3K4me1.149.broadPeak.lifted.bed.gz processed_file_md5 d5b20fee9e52d4bf98144eef04cb3ec9 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/BI.Brain_Mid_Frontal_Lobe.H3K4me1.149.broadPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/BI.Brain_Mid_Frontal_Lobe.H3K4me1.149.broadPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/broadPeak/BI.Brain_Mid_Frontal_Lobe.H3K4me1.149.broadPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/broadpeak/BI.Brain_Mid_Frontal_Lobe.H3K4me1.149.broadPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/broadpeak/ raw_file_md5 4e22211843d47565e998ac843deb8077 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=2015;Original_cell_type=Brain Mid Frontal Lobe;Donor=149;schema=BED3+9;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Nervous life_stage Unknown track_name ROADMAP Mid frontal lobe ChIP-seq H3K4me1-histone-mark peaks (broadPeak-lifted) [Histone ChIP-seq peaks]
H3K4me1 • CD8+ naive T cell NGRMPBTSGMK4LQ • ROADMAP25693563 ChIP-seq CD8+ naive T cell Histone Show metadata Download track Track metadata identifier NGRMPBTSGMK4LQ data_source ROADMAP Download track Download number_of_intervals 142,810 bp_covered 93,335,047 output_type peaks genome_build hg38 cell_type CD8+ naive T cell biosample_type Primary cell biosample_term_id CL:0000900 tissue_category Blood encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed narrowPeak-lifted file_size 4,537,317 downloaded_date 08/15/2018 release_date 11/30/2014 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/BI.CD8_Naive_Primary_Cells.H3K4me1.Donor_101_8_pooled_leukopaks_Jan_20_2011.narrowPeak.lifted.bed.gz processed_file_md5 7cc0b7bb85ce1f1943dfc8372d667616 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/BI.CD8_Naive_Primary_Cells.H3K4me1.Donor_101_8_pooled_leukopaks_Jan_20_2011.narrowPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/BI.CD8_Naive_Primary_Cells.H3K4me1.Donor_101_8_pooled_leukopaks_Jan_20_2011.narrowPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/narrowPeak/BI.CD8_Naive_Primary_Cells.H3K4me1.Donor_101_8_pooled_leukopaks_Jan_20_2011.narrowPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/narrowpeak/BI.CD8_Naive_Primary_Cells.H3K4me1.Donor_101_8_pooled_leukopaks_Jan_20_2011.narrowPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/narrowpeak/ raw_file_md5 0b32e65b54f40348c021cd74104390d0 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=2015;Original_cell_type=CD8 Naive Primary Cells;Donor=101_8_pooled_leukopaks_Jan_20_2011;schema=BED3+10;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Cardiovascular life_stage Unknown track_name ROADMAP CD8+ naive T cell ChIP-seq H3K4me1-histone-mark peaks (narrowPeak-lifted) [Histone ChIP-seq peaks]
H3K4me1 • Anterior caudate NGRMPBVKWNWHAA • ROADMAP25693563 ChIP-seq Anterior caudate Histone Show metadata Download track Track metadata identifier NGRMPBVKWNWHAA data_source ROADMAP Download track Download number_of_intervals 311,014 bp_covered 491,798,022 output_type peaks genome_build hg38 cell_type Anterior caudate biosample_type Primary tissue biosample_term_id UBERON:0001873 tissue_category Brain encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed broadPeak-lifted file_size 10,341,327 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/27/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/BI.Brain_Anterior_Caudate.H3K4me1.112.broadPeak.lifted.bed.gz processed_file_md5 54fc533783d09ce22b05023bf0e4dbb5 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/BI.Brain_Anterior_Caudate.H3K4me1.112.broadPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/BI.Brain_Anterior_Caudate.H3K4me1.112.broadPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/broadPeak/BI.Brain_Anterior_Caudate.H3K4me1.112.broadPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/broadpeak/BI.Brain_Anterior_Caudate.H3K4me1.112.broadPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/broadpeak/ raw_file_md5 bc45dda95c3b5b9eb0f07de57d647df4 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=2015;Original_cell_type=Brain Anterior Caudate;Donor=112;schema=BED3+9;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Nervous life_stage Unknown track_name ROADMAP Anterior caudate ChIP-seq H3K4me1-histone-mark peaks (broadPeak-lifted) [Histone ChIP-seq peaks]
H3K4me1 • CD4+ CD25- CD45RA+ naive T cell NGRMPBWAGQX3OL • ROADMAP25693563 ChIP-seq CD4+ CD25- CD45RA+ naive T cell Histone Show metadata Download track Track metadata identifier NGRMPBWAGQX3OL data_source ROADMAP Download track Download number_of_intervals 173,170 bp_covered 92,988,503 output_type peaks genome_build hg38 cell_type CD4+ CD25- CD45RA+ naive T cell biosample_type Primary cell biosample_term_id CL:0000895 tissue_category Blood encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed narrowPeak-lifted file_size 5,092,571 downloaded_date 08/15/2018 release_date 11/30/2014 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/BI.CD4+_CD25-_CD45RA+_Naive_Primary_Cells.H3K4me1.Donor_332.narrowPeak.lifted.bed.gz processed_file_md5 0568d02cf4f7d5ba6cbc1d9027db1d70 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/BI.CD4+_CD25-_CD45RA+_Naive_Primary_Cells.H3K4me1.Donor_332.narrowPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/BI.CD4+_CD25-_CD45RA+_Naive_Primary_Cells.H3K4me1.Donor_332.narrowPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/narrowPeak/BI.CD4+_CD25-_CD45RA+_Naive_Primary_Cells.H3K4me1.Donor_332.narrowPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/narrowpeak/BI.CD4+_CD25-_CD45RA+_Naive_Primary_Cells.H3K4me1.Donor_332.narrowPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/narrowpeak/ raw_file_md5 1a981d4a949ea3a514861aca818cbb7a data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=2015;Original_cell_type=CD4+ CD25- CD45RA+ Naive Primary Cells;Donor=332;schema=BED3+10;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Cardiovascular life_stage Unknown track_name ROADMAP CD4+ CD25- CD45RA+ naive T cell ChIP-seq H3K4me1-histone-mark peaks (narrowPeak-lifted) [Histone ChIP-seq peaks]