H3K4me1 • ES-WA7 NGRMPFUY47IJ4M • ROADMAP25693563 ChIP-seq ES-WA7 Histone Show metadata Download track Track metadata identifier NGRMPFUY47IJ4M data_source ROADMAP Download track Download number_of_intervals 1,003,702 bp_covered 768,428,791 output_type peaks genome_build hg38 cell_type ES-WA7 biosample_type Stem cell biosample_term_id CL:0002322 tissue_category Embryo encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed broadPeak-lifted file_size 28,849,403 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/27/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/BI.ES-WA7.H3K4me1.Solexa-12611.broadPeak.lifted.bed.gz processed_file_md5 da865a452bc18ea159b5abb710637d9c wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/BI.ES-WA7.H3K4me1.Solexa-12611.broadPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/BI.ES-WA7.H3K4me1.Solexa-12611.broadPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/broadPeak/BI.ES-WA7.H3K4me1.Solexa-12611.broadPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/broadpeak/BI.ES-WA7.H3K4me1.Solexa-12611.broadPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/broadpeak/ raw_file_md5 0784461a9cf26de09f9a836532f460bc data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=2015;Original_cell_type=ES-WA7;Donor=Solexa-12611;schema=BED3+9;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Embryo life_stage Embryonic track_name ROADMAP ES-WA7 ChIP-seq H3K4me1-histone-mark peaks (broadPeak-lifted) [Life stage: Embryonic] [Histone ChIP-seq peaks]
H3K4me1 • Large intestine NGRMPFW25WVLKV • ROADMAP25693563 ChIP-seq Large intestine Histone Show metadata Download track Track metadata identifier NGRMPFW25WVLKV data_source ROADMAP Download track Download number_of_intervals 237,611 bp_covered 116,273,202 output_type peaks genome_build hg38 cell_type Large intestine biosample_type Primary tissue biosample_term_id UBERON:0000059 tissue_category Digestive encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed narrowPeak-lifted file_size 7,640,534 downloaded_date 08/15/2018 release_date 11/30/2014 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/UW.Fetal_Intestine_Large.H3K4me1.H-24595.Histone.DS22552.narrowPeak.lifted.bed.gz processed_file_md5 05ca6fce6f28f5ce7041c99598ce6d67 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/UW.Fetal_Intestine_Large.H3K4me1.H-24595.Histone.DS22552.narrowPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/UW.Fetal_Intestine_Large.H3K4me1.H-24595.Histone.DS22552.narrowPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/narrowPeak/UW.Fetal_Intestine_Large.H3K4me1.H-24595.Histone.DS22552.narrowPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/narrowpeak/UW.Fetal_Intestine_Large.H3K4me1.H-24595.Histone.DS22552.narrowPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/narrowpeak/ raw_file_md5 743a768b5d3dd346e89f84cc765f666c data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=2015;Original_cell_type=Fetal Intestine Large;Donor=H-24595.Histone.DS22552;schema=BED3+10;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Digestive life_stage Fetal track_name ROADMAP Large intestine ChIP-seq H3K4me1-histone-mark peaks (narrowPeak-lifted) [Life stage: Fetal] [Histone ChIP-seq peaks]
H3K4me1 • Germinal matrix NGRMPFWILZ2QSP • ROADMAP25693563 ChIP-seq Germinal matrix Histone Show metadata Download track Track metadata identifier NGRMPFWILZ2QSP data_source ROADMAP Download track Download number_of_intervals 49,852 bp_covered 183,614,959 output_type peaks genome_build hg38 cell_type Germinal matrix biosample_type Primary tissue biosample_term_id Not available tissue_category Brain encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed gappedPeak-lifted file_size 2,715,233 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/28/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSF-UBC.Brain_Germinal_Matrix.H3K4me1.HuFGM02.gappedPeak.lifted.bed.gz processed_file_md5 5396c8da3a1781433559851758067f42 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSF-UBC.Brain_Germinal_Matrix.H3K4me1.HuFGM02.gappedPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSF-UBC.Brain_Germinal_Matrix.H3K4me1.HuFGM02.gappedPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/gappedPeak/UCSF-UBC.Brain_Germinal_Matrix.H3K4me1.HuFGM02.gappedPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/gappedpeak/UCSF-UBC.Brain_Germinal_Matrix.H3K4me1.HuFGM02.gappedPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/gappedpeak/ raw_file_md5 213d5207026081dc523b5b4b1606188b data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=2015;Original_cell_type=Brain Germinal Matrix;Donor=HuFGM02;schema=BED3+15;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=NTR:0001407;is_hg38_lifted=yes system_category Nervous life_stage Unknown track_name ROADMAP Germinal matrix ChIP-seq H3K4me1-histone-mark peaks (gappedPeak-lifted) [Histone ChIP-seq peaks]
H3K4me1 • Pancreatic islets NGRMPFYPZMPIPU • ROADMAP25693563 ChIP-seq Pancreatic islets Histone Show metadata Download track Track metadata identifier NGRMPFYPZMPIPU data_source ROADMAP Download track Download number_of_intervals 303,888 bp_covered 93,418,797 output_type peaks genome_build hg38 cell_type Pancreatic islets biosample_type Primary tissue biosample_term_id UBERON:0000006 tissue_category Pancreas encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed narrowPeak-lifted file_size 8,158,420 downloaded_date 08/15/2018 release_date 11/30/2014 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/UCSF-UBC.Pancreatic_Islets.H3K4me1.ZGI_213.narrowPeak.lifted.bed.gz processed_file_md5 92c3dff5d0b6006cc5e0409be0be0f22 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/UCSF-UBC.Pancreatic_Islets.H3K4me1.ZGI_213.narrowPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/UCSF-UBC.Pancreatic_Islets.H3K4me1.ZGI_213.narrowPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/narrowPeak/UCSF-UBC.Pancreatic_Islets.H3K4me1.ZGI_213.narrowPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/narrowpeak/UCSF-UBC.Pancreatic_Islets.H3K4me1.ZGI_213.narrowPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/narrowpeak/ raw_file_md5 dc7aa3d84b54983cefbae0ab6d330f28 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=2015;Original_cell_type=Pancreatic Islets;Donor=ZGI_213;schema=BED3+10;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Endocrine life_stage Unknown track_name ROADMAP Pancreatic islets ChIP-seq H3K4me1-histone-mark peaks (narrowPeak-lifted) [Histone ChIP-seq peaks]
H3K4me1 • Neurosphere cultured cell ganglionic eminence derived NGRMPFZRE66LBZ • ROADMAP25693563 ChIP-seq Neurosphere cultured cell ganglionic eminence derived Histone Show metadata Download track Track metadata identifier NGRMPFZRE66LBZ data_source ROADMAP Download track Download number_of_intervals 398,648 bp_covered 492,275,806 output_type peaks genome_build hg38 cell_type Neurosphere cultured cell ganglionic eminence derived biosample_type Stem cell biosample_term_id CL:0000047 tissue_category Brain encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed broadPeak-lifted file_size 13,329,857 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/27/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/UCSF-UBC.Neurosphere_Cultured_Cells_Ganglionic_Eminence_Derived.H3K4me1.HuFNSC04.broadPeak.lifted.bed.gz processed_file_md5 a5fdfc8558d0c8edea870625c342024c wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/UCSF-UBC.Neurosphere_Cultured_Cells_Ganglionic_Eminence_Derived.H3K4me1.HuFNSC04.broadPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/UCSF-UBC.Neurosphere_Cultured_Cells_Ganglionic_Eminence_Derived.H3K4me1.HuFNSC04.broadPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/broadPeak/UCSF-UBC.Neurosphere_Cultured_Cells_Ganglionic_Eminence_Derived.H3K4me1.HuFNSC04.broadPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/broadpeak/UCSF-UBC.Neurosphere_Cultured_Cells_Ganglionic_Eminence_Derived.H3K4me1.HuFNSC04.broadPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/broadpeak/ raw_file_md5 81b25d7eca4ff16bb7d9bddec3964c2d data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=2015;Original_cell_type=Neurosphere Cultured Cells Ganglionic Eminence Derived;Donor=HuFNSC04;schema=BED3+9;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Nervous life_stage Unknown track_name ROADMAP Neurosphere cultured cell ganglionic eminence derived ChIP-seq H3K4me1-histone-mark peaks (broadPeak-lifted) [Histone ChIP-seq peaks]
H3K4me1 • Adipose NGRMPG5OIE6XPT • ROADMAP25693563 ChIP-seq Adipose Histone Show metadata Download track Track metadata identifier NGRMPG5OIE6XPT data_source ROADMAP Download track Download number_of_intervals 71,060 bp_covered 157,593,956 output_type peaks genome_build hg38 cell_type Adipose biosample_type Primary tissue biosample_term_id NCIT:C12472 tissue_category Adipose encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed gappedPeak-lifted file_size 3,649,764 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/28/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.Adipose_Nuclei.H3K4me1.7.gappedPeak.lifted.bed.gz processed_file_md5 f14e8a68badd6ddc182245bca51f3592 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.Adipose_Nuclei.H3K4me1.7.gappedPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.Adipose_Nuclei.H3K4me1.7.gappedPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/gappedPeak/BI.Adipose_Nuclei.H3K4me1.7.gappedPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/gappedpeak/BI.Adipose_Nuclei.H3K4me1.7.gappedPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/gappedpeak/ raw_file_md5 f78dbca69fd00a9afa8c8ef445d1cb03 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=2015;Original_cell_type=Adipose Nuclei;Donor=7;schema=BED3+15;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Integumentary life_stage Unknown track_name ROADMAP Adipose ChIP-seq H3K4me1-histone-mark peaks (gappedPeak-lifted) [Histone ChIP-seq peaks]
H3K4me1 • Adipose NGRMPG5YRXSJ2S • ROADMAP25693563 ChIP-seq Adipose Histone Show metadata Download track Track metadata identifier NGRMPG5YRXSJ2S data_source ROADMAP Download track Download number_of_intervals 86,698 bp_covered 25,902,137 output_type peaks genome_build hg38 cell_type Adipose biosample_type Primary tissue biosample_term_id NCIT:C12472 tissue_category Adipose encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed narrowPeak-lifted file_size 2,378,021 downloaded_date 08/15/2018 release_date 11/30/2014 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/BI.Adipose_Nuclei.H3K4me1.7.narrowPeak.lifted.bed.gz processed_file_md5 cad3b5331aec29853a6ad835e9511ad5 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/BI.Adipose_Nuclei.H3K4me1.7.narrowPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/BI.Adipose_Nuclei.H3K4me1.7.narrowPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/narrowPeak/BI.Adipose_Nuclei.H3K4me1.7.narrowPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/narrowpeak/BI.Adipose_Nuclei.H3K4me1.7.narrowPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/narrowpeak/ raw_file_md5 0d33b45ea316d7761ff19aca6188f9fe data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=2015;Original_cell_type=Adipose Nuclei;Donor=7;schema=BED3+10;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Integumentary life_stage Unknown track_name ROADMAP Adipose ChIP-seq H3K4me1-histone-mark peaks (narrowPeak-lifted) [Histone ChIP-seq peaks]
H3K4me1 • Peripheral blood mononuclear cell NGRMPG65XV6ECY • ROADMAP25693563 ChIP-seq Peripheral blood mononuclear cell Histone Show metadata Download track Track metadata identifier NGRMPG65XV6ECY data_source ROADMAP Download track Download number_of_intervals 184,026 bp_covered 72,626,361 output_type peaks genome_build hg38 cell_type Peripheral blood mononuclear cell biosample_type Primary cell biosample_term_id CL:2000001 tissue_category Blood encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed narrowPeak-lifted file_size 5,180,647 downloaded_date 08/15/2018 release_date 11/30/2014 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/UCSF-UBC.Peripheral_Blood_Mononuclear_Primary_Cells.H3K4me1.TC015.narrowPeak.lifted.bed.gz processed_file_md5 3bae209fbf5db1c4a81df8d8ea4047ca wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/UCSF-UBC.Peripheral_Blood_Mononuclear_Primary_Cells.H3K4me1.TC015.narrowPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/UCSF-UBC.Peripheral_Blood_Mononuclear_Primary_Cells.H3K4me1.TC015.narrowPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/narrowPeak/UCSF-UBC.Peripheral_Blood_Mononuclear_Primary_Cells.H3K4me1.TC015.narrowPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/narrowpeak/UCSF-UBC.Peripheral_Blood_Mononuclear_Primary_Cells.H3K4me1.TC015.narrowPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/narrowpeak/ raw_file_md5 307d4247739dd12034684dbd8d2e42f0 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=2015;Original_cell_type=Peripheral Blood Mononuclear Primary Cells;Donor=TC015;schema=BED3+10;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Cardiovascular life_stage Unknown track_name ROADMAP Peripheral blood mononuclear cell ChIP-seq H3K4me1-histone-mark peaks (narrowPeak-lifted) [Histone ChIP-seq peaks]
H3K4me1 • Heart NGRMPGAORMSU5Y • ROADMAP25693563 ChIP-seq Heart Histone Show metadata Download track Track metadata identifier NGRMPGAORMSU5Y data_source ROADMAP Download track Download number_of_intervals 79,956 bp_covered 278,856,549 output_type peaks genome_build hg38 cell_type Heart biosample_type Primary tissue biosample_term_id NCIT:C12727 tissue_category Heart encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed gappedPeak-lifted file_size 4,403,380 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/28/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.Fetal_Heart.H3K4me1.UW_H23914.gappedPeak.lifted.bed.gz processed_file_md5 673b523e9eb4345539e4f1c396c18ef2 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.Fetal_Heart.H3K4me1.UW_H23914.gappedPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.Fetal_Heart.H3K4me1.UW_H23914.gappedPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/gappedPeak/BI.Fetal_Heart.H3K4me1.UW_H23914.gappedPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/gappedpeak/BI.Fetal_Heart.H3K4me1.UW_H23914.gappedPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/gappedpeak/ raw_file_md5 1f720339abaed3be37c9758aeae6f3b3 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=2015;Original_cell_type=Fetal Heart;Donor=UW_H23914;schema=BED3+15;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Cardiovascular life_stage Fetal track_name ROADMAP Heart ChIP-seq H3K4me1-histone-mark peaks (gappedPeak-lifted) [Life stage: Fetal] [Histone ChIP-seq peaks]
H3K4me1 • Urinary bladder NGRMPGAQEZTYSR • ROADMAP25693563 ChIP-seq Urinary bladder Histone Show metadata Download track Track metadata identifier NGRMPGAQEZTYSR data_source ROADMAP Download track Download number_of_intervals 65,822 bp_covered 122,687,146 output_type peaks genome_build hg38 cell_type Urinary bladder biosample_type Primary tissue biosample_term_id UBERON:0001255 tissue_category Urinary encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed gappedPeak-lifted file_size 3,107,287 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/28/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.Bladder.H3K4me1.STL003.gappedPeak.lifted.bed.gz processed_file_md5 614d7bd5f08f457628320b967cc56d07 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.Bladder.H3K4me1.STL003.gappedPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.Bladder.H3K4me1.STL003.gappedPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/gappedPeak/UCSD.Bladder.H3K4me1.STL003.gappedPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/gappedpeak/UCSD.Bladder.H3K4me1.STL003.gappedPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/gappedpeak/ raw_file_md5 4554af9fa8a2d478752e09ff70b4c224 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=2015;Original_cell_type=Urinary bladder;Donor=STL003;schema=BED3+15;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Renal life_stage Unknown track_name ROADMAP Urinary bladder ChIP-seq H3K4me1-histone-mark peaks (gappedPeak-lifted) [Histone ChIP-seq peaks]
H3K4me1 • Thymus NGRMPGCBP2I5TY • ROADMAP25693563 ChIP-seq Thymus Histone Show metadata Download track Track metadata identifier NGRMPGCBP2I5TY data_source ROADMAP Download track Download number_of_intervals 114,106 bp_covered 46,756,366 output_type peaks genome_build hg38 cell_type Thymus biosample_type Primary tissue biosample_term_id UBERON:0002370 tissue_category Immune Organ encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed narrowPeak-lifted file_size 3,270,903 downloaded_date 08/15/2018 release_date 11/30/2014 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/UCSD.Thymus.H3K4me1.STL001.narrowPeak.lifted.bed.gz processed_file_md5 b639d23c35581d1642daf8c0d68f9efa wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/UCSD.Thymus.H3K4me1.STL001.narrowPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/UCSD.Thymus.H3K4me1.STL001.narrowPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/narrowPeak/UCSD.Thymus.H3K4me1.STL001.narrowPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/narrowpeak/UCSD.Thymus.H3K4me1.STL001.narrowPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/narrowpeak/ raw_file_md5 f30d15099fd3bbbf94b41dbc8633c2c7 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=2015;Original_cell_type=Thymus;Donor=STL001;schema=BED3+10;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Lymphatic life_stage Unknown track_name ROADMAP Thymus ChIP-seq H3K4me1-histone-mark peaks (narrowPeak-lifted) [Histone ChIP-seq peaks]
H3K4me1 • Kidney NGRMPGCCK5HVB7 • ROADMAP25693563 ChIP-seq Kidney Histone Show metadata Download track Track metadata identifier NGRMPGCCK5HVB7 data_source ROADMAP Download track Download number_of_intervals 59,561 bp_covered 131,000,634 output_type peaks genome_build hg38 cell_type Kidney biosample_type Primary tissue biosample_term_id UBERON:0002113 tissue_category Urinary encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed gappedPeak-lifted file_size 3,020,996 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/28/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.Fetal_Kidney.H3K4me1.UW_H-22676.gappedPeak.lifted.bed.gz processed_file_md5 e3481085ebd66cc1dbc5d2acaa782898 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.Fetal_Kidney.H3K4me1.UW_H-22676.gappedPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.Fetal_Kidney.H3K4me1.UW_H-22676.gappedPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/gappedPeak/BI.Fetal_Kidney.H3K4me1.UW_H-22676.gappedPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/gappedpeak/BI.Fetal_Kidney.H3K4me1.UW_H-22676.gappedPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/gappedpeak/ raw_file_md5 cdc854e446437878bcc9cb58c7a27e36 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=2015;Original_cell_type=Fetal Kidney;Donor=UW_H-22676;schema=BED3+15;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Renal life_stage Fetal track_name ROADMAP Kidney ChIP-seq H3K4me1-histone-mark peaks (gappedPeak-lifted) [Life stage: Fetal] [Histone ChIP-seq peaks]
H3K4me1 • Trophoblast NGRMPGDMHRHA6B • ROADMAP25693563 ChIP-seq Trophoblast Histone Show metadata Download track Track metadata identifier NGRMPGDMHRHA6B data_source ROADMAP Download track Download number_of_intervals 240,838 bp_covered 73,989,402 output_type peaks genome_build hg38 cell_type Trophoblast biosample_type In vitro differentiated cells biosample_term_id UBERON:0000088 tissue_category Embryo encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed narrowPeak-lifted file_size 7,504,335 downloaded_date 08/15/2018 release_date 11/30/2014 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H3K4me1.AY64.narrowPeak.lifted.bed.gz processed_file_md5 795c37974016d0ea783922838200ff26 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H3K4me1.AY64.narrowPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H3K4me1.AY64.narrowPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/narrowPeak/UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H3K4me1.AY64.narrowPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/narrowpeak/UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H3K4me1.AY64.narrowPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/narrowpeak/ raw_file_md5 0bcf039656d1ed508eea20df66ac3934 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=2015;Original_cell_type=H1 BMP4 Derived Trophoblast Cultured Cells;Donor=AY64;schema=BED3+10;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=NTR:0000856;is_hg38_lifted=yes system_category Embryo life_stage Embryonic track_name ROADMAP Trophoblast ChIP-seq H3K4me1-histone-mark peaks (narrowPeak-lifted) [Life stage: Embryonic] [Histone ChIP-seq peaks]
H3K4me1 • Heart NGRMPGE2SI6BSZ • ROADMAP25693563 ChIP-seq Heart Histone Show metadata Download track Track metadata identifier NGRMPGE2SI6BSZ data_source ROADMAP Download track Download number_of_intervals 167,751 bp_covered 116,398,128 output_type peaks genome_build hg38 cell_type Heart biosample_type Primary tissue biosample_term_id NCIT:C12727 tissue_category Heart encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed narrowPeak-lifted file_size 4,957,361 downloaded_date 08/15/2018 release_date 11/30/2014 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/BI.Fetal_Heart.H3K4me1.UW_H23914.narrowPeak.lifted.bed.gz processed_file_md5 40c4fe6ad92d96d2cc167ee98094dbf8 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/BI.Fetal_Heart.H3K4me1.UW_H23914.narrowPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/BI.Fetal_Heart.H3K4me1.UW_H23914.narrowPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/narrowPeak/BI.Fetal_Heart.H3K4me1.UW_H23914.narrowPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/narrowpeak/BI.Fetal_Heart.H3K4me1.UW_H23914.narrowPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/narrowpeak/ raw_file_md5 036e37ec414b9515438fdeeae2609497 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=2015;Original_cell_type=Fetal Heart;Donor=UW_H23914;schema=BED3+10;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Cardiovascular life_stage Fetal track_name ROADMAP Heart ChIP-seq H3K4me1-histone-mark peaks (narrowPeak-lifted) [Life stage: Fetal] [Histone ChIP-seq peaks]
H3K4me1 • H1-hESC NGRMPGG4OWHRUQ • ROADMAP25693563 ChIP-seq H1-hESC Histone Show metadata Download track Track metadata identifier NGRMPGG4OWHRUQ data_source ROADMAP Download track Download number_of_intervals 533,119 bp_covered 558,648,316 output_type peaks genome_build hg38 cell_type H1-hESC biosample_type Stem cell biosample_term_id EFO:0003042 tissue_category Embryo encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed broadPeak-lifted file_size 17,628,964 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/27/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/UCSF-UBC.H1.H3K4me1.H1EScd1-me1K4-D.broadPeak.lifted.bed.gz processed_file_md5 2bb72ffcbe586db8aea43dee3d82cb72 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/UCSF-UBC.H1.H3K4me1.H1EScd1-me1K4-D.broadPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/UCSF-UBC.H1.H3K4me1.H1EScd1-me1K4-D.broadPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/broadPeak/UCSF-UBC.H1.H3K4me1.H1EScd1-me1K4-D.broadPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/broadpeak/UCSF-UBC.H1.H3K4me1.H1EScd1-me1K4-D.broadPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/broadpeak/ raw_file_md5 435f966a5c681a00d346e8c54c24baa3 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=2015;Original_cell_type=H1;Donor=H1EScd1-me1K4-D;schema=BED3+9;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=EFO:0003042;is_hg38_lifted=yes system_category Embryo life_stage Embryonic track_name ROADMAP H1-hESC ChIP-seq H3K4me1-histone-mark peaks (broadPeak-lifted) [Life stage: Embryonic] [Histone ChIP-seq peaks]
H3K4me1 • H9 NGRMPGG6S5R2GW • ROADMAP25693563 ChIP-seq H9 Histone Show metadata Download track Track metadata identifier NGRMPGG6S5R2GW data_source ROADMAP Download track Download number_of_intervals 71,653 bp_covered 14,834,291 output_type peaks genome_build hg38 cell_type H9 biosample_type Stem cell biosample_term_id EFO:0003045 tissue_category Embryo encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed narrowPeak-lifted file_size 1,937,508 downloaded_date 08/15/2018 release_date 11/30/2014 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/UCSD.H9.H3K4me1.AK141.narrowPeak.lifted.bed.gz processed_file_md5 6a19191d60b20b526623b86b3af364c4 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/UCSD.H9.H3K4me1.AK141.narrowPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/UCSD.H9.H3K4me1.AK141.narrowPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/narrowPeak/UCSD.H9.H3K4me1.AK141.narrowPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/narrowpeak/UCSD.H9.H3K4me1.AK141.narrowPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/narrowpeak/ raw_file_md5 235569d5f8d42809547232b3f9bdcc6d data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=2015;Original_cell_type=H9;Donor=AK141;schema=BED3+10;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=EFO:0003045;is_hg38_lifted=yes system_category Embryo life_stage Embryonic track_name ROADMAP H9 ChIP-seq H3K4me1-histone-mark peaks (narrowPeak-lifted) [Life stage: Embryonic] [Histone ChIP-seq peaks]
H3K4me1 • Smooth muscle tissue NGRMPGIO3AACKC • ROADMAP25693563 ChIP-seq Smooth muscle tissue Histone Show metadata Download track Track metadata identifier NGRMPGIO3AACKC data_source ROADMAP Download track Download number_of_intervals 67,679 bp_covered 208,469,076 output_type peaks genome_build hg38 cell_type Smooth muscle tissue biosample_type Primary tissue biosample_term_id UBERON:0001135 tissue_category Digestive encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed gappedPeak-lifted file_size 3,745,111 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/28/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.Rectal_Smooth_Muscle.H3K4me1.30.gappedPeak.lifted.bed.gz processed_file_md5 e8c60b153247e5f5333184e9f897ea87 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.Rectal_Smooth_Muscle.H3K4me1.30.gappedPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.Rectal_Smooth_Muscle.H3K4me1.30.gappedPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/gappedPeak/BI.Rectal_Smooth_Muscle.H3K4me1.30.gappedPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/gappedpeak/BI.Rectal_Smooth_Muscle.H3K4me1.30.gappedPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/gappedpeak/ raw_file_md5 da377c035cd796cdec3ed9cac89582f6 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=2015;Original_cell_type=Rectal smooth muscle;Donor=30;schema=BED3+15;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Digestive life_stage Unknown track_name ROADMAP Smooth muscle tissue ChIP-seq H3K4me1-histone-mark peaks (gappedPeak-lifted) [Histone ChIP-seq peaks]
H3K4me1 • Pancreas NGRMPGTSTRNDUN • ROADMAP25693563 ChIP-seq Pancreas Histone Show metadata Download track Track metadata identifier NGRMPGTSTRNDUN data_source ROADMAP Download track Download number_of_intervals 695,201 bp_covered 533,176,128 output_type peaks genome_build hg38 cell_type Pancreas biosample_type Primary tissue biosample_term_id UBERON:0001264 tissue_category Pancreas encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed broadPeak-lifted file_size 22,942,545 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/27/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/UCSD.Pancreas.H3K4me1.STL002.broadPeak.lifted.bed.gz processed_file_md5 f67463f138b76be9667534cc19e0ac32 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/UCSD.Pancreas.H3K4me1.STL002.broadPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/UCSD.Pancreas.H3K4me1.STL002.broadPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/broadPeak/UCSD.Pancreas.H3K4me1.STL002.broadPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/broadpeak/UCSD.Pancreas.H3K4me1.STL002.broadPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/broadpeak/ raw_file_md5 a92a856fa1d2890a133168b76383c3db data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=2015;Original_cell_type=Pancreas;Donor=STL002;schema=BED3+9;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Endocrine life_stage Unknown track_name ROADMAP Pancreas ChIP-seq H3K4me1-histone-mark peaks (broadPeak-lifted) [Histone ChIP-seq peaks]
H3K4me1 • CD4+ CD25- IL17- Th17 cell NGRMPGUCL4KA2A • ROADMAP25693563 ChIP-seq CD4+ CD25- IL17- Th17 cell Histone Show metadata Download track Track metadata identifier NGRMPGUCL4KA2A data_source ROADMAP Download track Download number_of_intervals 143,778 bp_covered 412,142,188 output_type peaks genome_build hg38 cell_type CD4+ CD25- IL17- Th17 cell biosample_type Primary cell biosample_term_id CL:0000899 tissue_category Blood encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed broadPeak-lifted file_size 4,880,902 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/27/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/BI.CD4+_CD25-_IL17-_PMA-Ionomycin_stimulated_MACS_purified_Th_Primary_Cells.H3K4me1.Donor_62.broadPeak.lifted.bed.gz processed_file_md5 9583e1f47b243c2213cc88fc85b0cbed wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/BI.CD4+_CD25-_IL17-_PMA-Ionomycin_stimulated_MACS_purified_Th_Primary_Cells.H3K4me1.Donor_62.broadPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/BI.CD4+_CD25-_IL17-_PMA-Ionomycin_stimulated_MACS_purified_Th_Primary_Cells.H3K4me1.Donor_62.broadPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/broadPeak/BI.CD4+_CD25-_IL17-_PMA-Ionomycin_stimulated_MACS_purified_Th_Primary_Cells.H3K4me1.Donor_62.broadPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/broadpeak/BI.CD4+_CD25-_IL17-_PMA-Ionomycin_stimulated_MACS_purified_Th_Primary_Cells.H3K4me1.Donor_62.broadPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/broadpeak/ raw_file_md5 1a58b59257016810584a23cd583605a6 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=2015;Original_cell_type=CD4+ CD25- IL17- PMA-Ionomycin stimulated MACS purified Th Primary Cells;Donor=62;schema=BED3+9;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Cardiovascular life_stage Unknown track_name ROADMAP CD4+ CD25- IL17- Th17 cell ChIP-seq H3K4me1-histone-mark peaks (broadPeak-lifted) [Histone ChIP-seq peaks]
H3K4me1 • Skeletal muscle NGRMPGUVPR52EN • ROADMAP25693563 ChIP-seq Skeletal muscle Histone Show metadata Download track Track metadata identifier NGRMPGUVPR52EN data_source ROADMAP Download track Download number_of_intervals 270,597 bp_covered 160,332,077 output_type peaks genome_build hg38 cell_type Skeletal muscle biosample_type Primary tissue biosample_term_id BTO:0001103 tissue_category Skeletal Muscle encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed narrowPeak-lifted file_size 8,603,980 downloaded_date 08/15/2018 release_date 11/30/2014 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/BI.Skeletal_Muscle.H3K4me1.62.narrowPeak.lifted.bed.gz processed_file_md5 34c7bb06839cd9ee09d61264c6da3fdc wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/BI.Skeletal_Muscle.H3K4me1.62.narrowPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/BI.Skeletal_Muscle.H3K4me1.62.narrowPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/narrowPeak/BI.Skeletal_Muscle.H3K4me1.62.narrowPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/narrowpeak/BI.Skeletal_Muscle.H3K4me1.62.narrowPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/narrowpeak/ raw_file_md5 b645ea89c7cd43247a42dcdb0ac61f8f data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=2015;Original_cell_type=Skeletal Muscle;Donor=62;schema=BED3+10;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Muscular life_stage Unknown track_name ROADMAP Skeletal muscle ChIP-seq H3K4me1-histone-mark peaks (narrowPeak-lifted) [Histone ChIP-seq peaks]