H3K4me1 • Muscle satellite cultured cell NGRMPMUEKTYHUF • ROADMAP25693563 ChIP-seq Muscle satellite cultured cell Histone Show metadata Download track Track metadata identifier NGRMPMUEKTYHUF data_source ROADMAP Download track Download number_of_intervals 231,576 bp_covered 125,372,037 output_type peaks genome_build hg38 cell_type Muscle satellite cultured cell biosample_type Primary culture biosample_term_id CL:0000594 tissue_category Skeletal Muscle encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed narrowPeak-lifted file_size 7,512,696 downloaded_date 08/15/2018 release_date 11/30/2014 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/BI.Muscle_Satellite_Cultured_Cells.H3K4me1.hSKM-3.narrowPeak.lifted.bed.gz processed_file_md5 1f3880bf86e0d6ff87d26de3a8513ac5 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/BI.Muscle_Satellite_Cultured_Cells.H3K4me1.hSKM-3.narrowPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/BI.Muscle_Satellite_Cultured_Cells.H3K4me1.hSKM-3.narrowPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/narrowPeak/BI.Muscle_Satellite_Cultured_Cells.H3K4me1.hSKM-3.narrowPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/narrowpeak/BI.Muscle_Satellite_Cultured_Cells.H3K4me1.hSKM-3.narrowPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/narrowpeak/ raw_file_md5 c267a893b73a0c52b08a299b27f9eeda data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=2015;Original_cell_type=Muscle Satellite Cultured Cells;Donor=hSKM-3;schema=BED3+10;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Muscular life_stage Unknown track_name ROADMAP Muscle satellite cultured cell ChIP-seq H3K4me1-histone-mark peaks (narrowPeak-lifted) [Histone ChIP-seq peaks]
H3K4me1 • Mesendoderm NGRMPMWWLVNC4P • ROADMAP25693563 ChIP-seq Mesendoderm Histone Show metadata Download track Track metadata identifier NGRMPMWWLVNC4P data_source ROADMAP Download track Download number_of_intervals 141,486 bp_covered 296,198,988 output_type peaks genome_build hg38 cell_type Mesendoderm biosample_type In vitro differentiated cells biosample_term_id BTO:0003953 tissue_category Embryo encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed gappedPeak-lifted file_size 7,358,260 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/28/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.H3K4me1.AK133.gappedPeak.lifted.bed.gz processed_file_md5 efc94a1346578c823b4a201d3e5fd0a5 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.H3K4me1.AK133.gappedPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.H3K4me1.AK133.gappedPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/gappedPeak/UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.H3K4me1.AK133.gappedPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/gappedpeak/UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.H3K4me1.AK133.gappedPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/gappedpeak/ raw_file_md5 62930490503f3898a9cfad4dd6836f9f data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=2015;Original_cell_type=H1 BMP4 Derived Mesendoderm Cultured Cells;Donor=AK133;schema=BED3+15;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=NTR:0000856;is_hg38_lifted=yes system_category Embryo life_stage Embryonic track_name ROADMAP Mesendoderm ChIP-seq H3K4me1-histone-mark peaks (gappedPeak-lifted) [Life stage: Embryonic] [Histone ChIP-seq peaks]
H3K4me1 • Adrenal gland NGRMPMXABXJKEG • ROADMAP25693563 ChIP-seq Adrenal gland Histone Show metadata Download track Track metadata identifier NGRMPMXABXJKEG data_source ROADMAP Download track Download number_of_intervals 72,593 bp_covered 22,554,219 output_type peaks genome_build hg38 cell_type Adrenal gland biosample_type Primary tissue biosample_term_id UBERON:0002369 tissue_category Endocrine encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed narrowPeak-lifted file_size 2,087,019 downloaded_date 08/15/2018 release_date 11/30/2014 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/UCSD.Adrenal_Gland.H3K4me1.STL002.narrowPeak.lifted.bed.gz processed_file_md5 7c4d60bd8527568ec5c141b75192a74e wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/UCSD.Adrenal_Gland.H3K4me1.STL002.narrowPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/UCSD.Adrenal_Gland.H3K4me1.STL002.narrowPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/narrowPeak/UCSD.Adrenal_Gland.H3K4me1.STL002.narrowPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/narrowpeak/UCSD.Adrenal_Gland.H3K4me1.STL002.narrowPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/narrowpeak/ raw_file_md5 789532abcf2b182b1744a47f63fac402 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=2015;Original_cell_type=Adrenal Gland;Donor=STL002;schema=BED3+10;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Endocrine life_stage Unknown track_name ROADMAP Adrenal gland ChIP-seq H3K4me1-histone-mark peaks (narrowPeak-lifted) [Histone ChIP-seq peaks]
H3K4me1 • Fibroblast NGRMPMXH4BGAU3 • ROADMAP25693563 ChIP-seq Fibroblast Histone Show metadata Download track Track metadata identifier NGRMPMXH4BGAU3 data_source ROADMAP Download track Download number_of_intervals 131,991 bp_covered 43,013,919 output_type peaks genome_build hg38 cell_type Fibroblast biosample_type Primary cell biosample_term_id CL:0000057 tissue_category Breast encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed narrowPeak-lifted file_size 3,699,394 downloaded_date 08/15/2018 release_date 11/30/2014 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/UCSF-UBC.Breast_Fibroblast_Primary_Cells.H3K4me1.RM071.narrowPeak.lifted.bed.gz processed_file_md5 7a36f72785ef0218a00b5ea887f49f23 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/UCSF-UBC.Breast_Fibroblast_Primary_Cells.H3K4me1.RM071.narrowPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/UCSF-UBC.Breast_Fibroblast_Primary_Cells.H3K4me1.RM071.narrowPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/narrowPeak/UCSF-UBC.Breast_Fibroblast_Primary_Cells.H3K4me1.RM071.narrowPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/narrowpeak/UCSF-UBC.Breast_Fibroblast_Primary_Cells.H3K4me1.RM071.narrowPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/narrowpeak/ raw_file_md5 a6ed5117d5fa1d0cb87297726ebf7f74 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=2015;Original_cell_type=Fibroblast of breast Primary Cells;Donor=RM071;schema=BED3+10;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Reproductive life_stage Unknown track_name ROADMAP Fibroblast ChIP-seq H3K4me1-histone-mark peaks (narrowPeak-lifted) [Histone ChIP-seq peaks]
H3K4me1 • HUES64 NGRMPMYSUYAEQ4 • ROADMAP25693563 ChIP-seq HUES64 Histone Show metadata Download track Track metadata identifier NGRMPMYSUYAEQ4 data_source ROADMAP Download track Download number_of_intervals 352,870 bp_covered 592,471,030 output_type peaks genome_build hg38 cell_type HUES64 biosample_type Primary culture biosample_term_id EFO:0007089 tissue_category Embryo encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed broadPeak-lifted file_size 11,935,099 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/27/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/BI.HUES64.H3K4me1.Lib_MC_20101025_01--ChIP_MC_20101020_01_ES_cell_HUES_64_H3K4Me1.broadPeak.lifted.bed.gz processed_file_md5 1d0c4c78847eeb44310767fc8c21baf8 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/BI.HUES64.H3K4me1.Lib_MC_20101025_01--ChIP_MC_20101020_01_ES_cell_HUES_64_H3K4Me1.broadPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/BI.HUES64.H3K4me1.Lib_MC_20101025_01--ChIP_MC_20101020_01_ES_cell_HUES_64_H3K4Me1.broadPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/broadPeak/BI.HUES64.H3K4me1.Lib_MC_20101025_01--ChIP_MC_20101020_01_ES_cell_HUES_64_H3K4Me1.broadPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/broadpeak/BI.HUES64.H3K4me1.Lib_MC_20101025_01--ChIP_MC_20101020_01_ES_cell_HUES_64_H3K4Me1.broadPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/broadpeak/ raw_file_md5 1a726b5bd197466648b0ffad6bed72bc data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=2015;Original_cell_type=HUES64;Donor=Lib_MC_20101025_01--ChIP_MC_20101020_01_ES_cell_HUES_64_H3K4Me1;schema=BED3+9;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=EFO:0007089;is_hg38_lifted=yes system_category Embryo life_stage Embryonic track_name ROADMAP HUES64 ChIP-seq H3K4me1-histone-mark peaks (broadPeak-lifted) [Life stage: Embryonic] [Histone ChIP-seq peaks]
H3K4me1 • Muscle NGRMPN4DZY63OG • ROADMAP25693563 ChIP-seq Muscle Histone Show metadata Download track Track metadata identifier NGRMPN4DZY63OG data_source ROADMAP Download track Download number_of_intervals 115,931 bp_covered 299,941,991 output_type peaks genome_build hg38 cell_type Muscle biosample_type Primary tissue biosample_term_id NCIT:C13056 tissue_category Skeletal Muscle encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed gappedPeak-lifted file_size 6,423,313 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/28/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UW.Fetal_Muscle_Leg.H3K4me1.H-24644.Histone.DS22558.gappedPeak.lifted.bed.gz processed_file_md5 8c6838758777d7f6844fc750f70276dd wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UW.Fetal_Muscle_Leg.H3K4me1.H-24644.Histone.DS22558.gappedPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UW.Fetal_Muscle_Leg.H3K4me1.H-24644.Histone.DS22558.gappedPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/gappedPeak/UW.Fetal_Muscle_Leg.H3K4me1.H-24644.Histone.DS22558.gappedPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/gappedpeak/UW.Fetal_Muscle_Leg.H3K4me1.H-24644.Histone.DS22558.gappedPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/gappedpeak/ raw_file_md5 4be5be837ba4c7eecefb990bbd876919 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=2015;Original_cell_type=Fetal Muscle Leg;Donor=H-24644.Histone.DS22558;schema=BED3+15;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Muscular life_stage Fetal track_name ROADMAP Muscle ChIP-seq H3K4me1-histone-mark peaks (gappedPeak-lifted) [Life stage: Fetal] [Histone ChIP-seq peaks]
H3K4me1 • Neuronal progenitor cell NGRMPN5F2F6VYV • ROADMAP25693563 ChIP-seq Neuronal progenitor cell Histone Show metadata Download track Track metadata identifier NGRMPN5F2F6VYV data_source ROADMAP Download track Download number_of_intervals 232,617 bp_covered 347,329,185 output_type peaks genome_build hg38 cell_type Neuronal progenitor cell biosample_type In vitro differentiated cells biosample_term_id CL:0000047 tissue_category Stem Cell encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed gappedPeak-lifted file_size 12,020,200 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/28/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H3K4me1.CY25.gappedPeak.lifted.bed.gz processed_file_md5 2452894e7d82027dac183dd91441dea7 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H3K4me1.CY25.gappedPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H3K4me1.CY25.gappedPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/gappedPeak/UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H3K4me1.CY25.gappedPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/gappedpeak/UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H3K4me1.CY25.gappedPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/gappedpeak/ raw_file_md5 ac4c630a65643b533c9ca0c8aab1329c data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=2015;Original_cell_type=H1 Derived Neuronal Progenitor Cultured Cells;Donor=CY25;schema=BED3+15;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Stem Cell life_stage Embryonic track_name ROADMAP Neuronal progenitor cell ChIP-seq H3K4me1-histone-mark peaks (gappedPeak-lifted) [Life stage: Embryonic] [Histone ChIP-seq peaks]
H3K4me1 • iPS DF 6 NGRMPN5JAXDIO3 • ROADMAP25693563 ChIP-seq iPS DF 6 Histone Show metadata Download track Track metadata identifier NGRMPN5JAXDIO3 data_source ROADMAP Download track Download number_of_intervals 104,848 bp_covered 17,265,020 output_type peaks genome_build hg38 cell_type iPS DF 6 biosample_type Primary culture biosample_term_id CL:0002248 tissue_category iPSC encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed narrowPeak-lifted file_size 2,996,051 downloaded_date 08/15/2018 release_date 11/30/2014 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/UCSD.iPS_DF_6.9.H3K4me1.SK469.narrowPeak.lifted.bed.gz processed_file_md5 b5f393a19292825c64a0a537878b6b08 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/UCSD.iPS_DF_6.9.H3K4me1.SK469.narrowPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/UCSD.iPS_DF_6.9.H3K4me1.SK469.narrowPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/narrowPeak/UCSD.iPS_DF_6.9.H3K4me1.SK469.narrowPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/narrowpeak/UCSD.iPS_DF_6.9.H3K4me1.SK469.narrowPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/narrowpeak/ raw_file_md5 0a4c59ec6ea15bf340816788df744fc2 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=2015;Original_cell_type=iPS DF 6;Donor=SK469;schema=BED3+10;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Stem Cell life_stage Unknown track_name ROADMAP iPS DF 6 ChIP-seq H3K4me1-histone-mark peaks (narrowPeak-lifted) [Histone ChIP-seq peaks]
H3K4me1 • Neurosphere cultured cell ganglionic eminence derived NGRMPNA4KQMEMR • ROADMAP25693563 ChIP-seq Neurosphere cultured cell ganglionic eminence derived Histone Show metadata Download track Track metadata identifier NGRMPNA4KQMEMR data_source ROADMAP Download track Download number_of_intervals 228,423 bp_covered 336,024,647 output_type peaks genome_build hg38 cell_type Neurosphere cultured cell ganglionic eminence derived biosample_type Stem cell biosample_term_id CL:0000047 tissue_category Brain encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed broadPeak-lifted file_size 7,541,829 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/27/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/UCSF-UBC.Neurosphere_Cultured_Cells_Ganglionic_Eminence_Derived.H3K4me1.HuFNSC02.broadPeak.lifted.bed.gz processed_file_md5 12d78d31f527f2d7b956d5f661746845 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/UCSF-UBC.Neurosphere_Cultured_Cells_Ganglionic_Eminence_Derived.H3K4me1.HuFNSC02.broadPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/UCSF-UBC.Neurosphere_Cultured_Cells_Ganglionic_Eminence_Derived.H3K4me1.HuFNSC02.broadPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/broadPeak/UCSF-UBC.Neurosphere_Cultured_Cells_Ganglionic_Eminence_Derived.H3K4me1.HuFNSC02.broadPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/broadpeak/UCSF-UBC.Neurosphere_Cultured_Cells_Ganglionic_Eminence_Derived.H3K4me1.HuFNSC02.broadPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/broadpeak/ raw_file_md5 ebf249e5d3b1c15582a343e7985f400b data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=2015;Original_cell_type=Neurosphere Cultured Cells Ganglionic Eminence Derived;Donor=HuFNSC02;schema=BED3+9;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Nervous life_stage Unknown track_name ROADMAP Neurosphere cultured cell ganglionic eminence derived ChIP-seq H3K4me1-histone-mark peaks (broadPeak-lifted) [Histone ChIP-seq peaks]
H3K4me1 • Neuronal progenitor cell NGRMPNATOC67RX • ROADMAP25693563 ChIP-seq Neuronal progenitor cell Histone Show metadata Download track Track metadata identifier NGRMPNATOC67RX data_source ROADMAP Download track Download number_of_intervals 780,136 bp_covered 607,208,184 output_type peaks genome_build hg38 cell_type Neuronal progenitor cell biosample_type In vitro differentiated cells biosample_term_id CL:0000047 tissue_category Stem Cell encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed broadPeak-lifted file_size 25,726,218 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/27/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H3K4me1.AK242.broadPeak.lifted.bed.gz processed_file_md5 b3c9d90db24d1655b3af63f36b057aa2 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H3K4me1.AK242.broadPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H3K4me1.AK242.broadPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/broadPeak/UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H3K4me1.AK242.broadPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/broadpeak/UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H3K4me1.AK242.broadPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/broadpeak/ raw_file_md5 ab1666fe0242781db9188236e5576998 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=2015;Original_cell_type=H1 Derived Neuronal Progenitor Cultured Cells;Donor=AK242;schema=BED3+9;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Stem Cell life_stage Embryonic track_name ROADMAP Neuronal progenitor cell ChIP-seq H3K4me1-histone-mark peaks (broadPeak-lifted) [Life stage: Embryonic] [Histone ChIP-seq peaks]
H3K4me1 • Smooth muscle tissue NGRMPNDDFHFQ24 • ROADMAP25693563 ChIP-seq Smooth muscle tissue Histone Show metadata Download track Track metadata identifier NGRMPNDDFHFQ24 data_source ROADMAP Download track Download number_of_intervals 241,936 bp_covered 144,439,646 output_type peaks genome_build hg38 cell_type Smooth muscle tissue biosample_type Primary tissue biosample_term_id UBERON:0001135 tissue_category Digestive encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed narrowPeak-lifted file_size 7,271,428 downloaded_date 08/15/2018 release_date 11/30/2014 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/BI.Duodenum_Smooth_Muscle.H3K4me1.Donor_174_REMC_28.narrowPeak.lifted.bed.gz processed_file_md5 11c5c13e7cdd8e5d97cac2bd09410176 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/BI.Duodenum_Smooth_Muscle.H3K4me1.Donor_174_REMC_28.narrowPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/BI.Duodenum_Smooth_Muscle.H3K4me1.Donor_174_REMC_28.narrowPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/narrowPeak/BI.Duodenum_Smooth_Muscle.H3K4me1.Donor_174_REMC_28.narrowPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/narrowpeak/BI.Duodenum_Smooth_Muscle.H3K4me1.Donor_174_REMC_28.narrowPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/narrowpeak/ raw_file_md5 cfbb942653ca6aa958b602d0c588fdee data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=2015;Original_cell_type=Duodenum Smooth Muscle;Donor=174_REMC_28;schema=BED3+10;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Digestive life_stage Unknown track_name ROADMAP Smooth muscle tissue ChIP-seq H3K4me1-histone-mark peaks (narrowPeak-lifted) [Histone ChIP-seq peaks]
H3K4me1 • Fibroblast NGRMPNGJ2VKQBZ • ROADMAP25693563 ChIP-seq Fibroblast Histone Show metadata Download track Track metadata identifier NGRMPNGJ2VKQBZ data_source ROADMAP Download track Download number_of_intervals 112,957 bp_covered 435,207,455 output_type peaks genome_build hg38 cell_type Fibroblast biosample_type Primary cell biosample_term_id CL:0000057 tissue_category Skin encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed gappedPeak-lifted file_size 6,580,301 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/28/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSF-UBC.Penis_Foreskin_Fibroblast_Primary_Cells.H3K4me1.skin01.gappedPeak.lifted.bed.gz processed_file_md5 2a9f8123fe7036ff4135398f58fa1b00 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSF-UBC.Penis_Foreskin_Fibroblast_Primary_Cells.H3K4me1.skin01.gappedPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSF-UBC.Penis_Foreskin_Fibroblast_Primary_Cells.H3K4me1.skin01.gappedPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/gappedPeak/UCSF-UBC.Penis_Foreskin_Fibroblast_Primary_Cells.H3K4me1.skin01.gappedPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/gappedpeak/UCSF-UBC.Penis_Foreskin_Fibroblast_Primary_Cells.H3K4me1.skin01.gappedPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/gappedpeak/ raw_file_md5 dc2069cae9ccf48c9348f001f6e0637c data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=2015;Original_cell_type=Foreskin fibroblast Primary Cells;Donor=skin01;schema=BED3+15;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Integumentary life_stage Unknown track_name ROADMAP Fibroblast ChIP-seq H3K4me1-histone-mark peaks (gappedPeak-lifted) [Histone ChIP-seq peaks]
H3K4me1 • CD3+ NGRMPNH2VGE6OX • ROADMAP25693563 ChIP-seq CD3+ Histone Show metadata Download track Track metadata identifier NGRMPNH2VGE6OX data_source ROADMAP Download track Download number_of_intervals 70,138 bp_covered 275,444,470 output_type peaks genome_build hg38 cell_type CD3+ biosample_type Primary cell biosample_term_id CL:0000084 tissue_category Blood encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed gappedPeak-lifted file_size 4,135,933 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/28/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UW.CD3_Primary_Cells.H3K4me1.RO_01679.Histone.DS22561.gappedPeak.lifted.bed.gz processed_file_md5 b1ae513c423b093e8631702e3bcb120f wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UW.CD3_Primary_Cells.H3K4me1.RO_01679.Histone.DS22561.gappedPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UW.CD3_Primary_Cells.H3K4me1.RO_01679.Histone.DS22561.gappedPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/gappedPeak/UW.CD3_Primary_Cells.H3K4me1.RO_01679.Histone.DS22561.gappedPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/gappedpeak/UW.CD3_Primary_Cells.H3K4me1.RO_01679.Histone.DS22561.gappedPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/gappedpeak/ raw_file_md5 ef341094e3b5b0df09a135452250bc15 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=2015;Original_cell_type=CD3 Primary Cells;Donor=RO_01679.Histone.DS22561;schema=BED3+15;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Cardiovascular life_stage Unknown track_name ROADMAP CD3+ ChIP-seq H3K4me1-histone-mark peaks (gappedPeak-lifted) [Histone ChIP-seq peaks]
H3K4me1 • CD3+ NGRMPNHKKMKXBG • ROADMAP25693563 ChIP-seq CD3+ Histone Show metadata Download track Track metadata identifier NGRMPNHKKMKXBG data_source ROADMAP Download track Download number_of_intervals 1,214,196 bp_covered 690,448,971 output_type peaks genome_build hg38 cell_type CD3+ biosample_type Primary cell biosample_term_id CL:0000084 tissue_category Blood encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed broadPeak-lifted file_size 34,831,984 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/27/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/BI.CD3_Primary_Cells.H3K4me1.CD3_39840.broadPeak.lifted.bed.gz processed_file_md5 5b756076f174f3bb55bdc194b52d0c97 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/BI.CD3_Primary_Cells.H3K4me1.CD3_39840.broadPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/BI.CD3_Primary_Cells.H3K4me1.CD3_39840.broadPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/broadPeak/BI.CD3_Primary_Cells.H3K4me1.CD3_39840.broadPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/broadpeak/BI.CD3_Primary_Cells.H3K4me1.CD3_39840.broadPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/broadpeak/ raw_file_md5 f9a5b7094d6049f951d5c5bbfce537bd data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=2015;Original_cell_type=CD3 Primary Cells;Donor=CD3_39840;schema=BED3+9;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Cardiovascular life_stage Unknown track_name ROADMAP CD3+ ChIP-seq H3K4me1-histone-mark peaks (broadPeak-lifted) [Histone ChIP-seq peaks]
H3K4me1 • iPS DF 19 NGRMPNHSS6XKP3 • ROADMAP25693563 ChIP-seq iPS DF 19 Histone Show metadata Download track Track metadata identifier NGRMPNHSS6XKP3 data_source ROADMAP Download track Download number_of_intervals 183,292 bp_covered 363,773,539 output_type peaks genome_build hg38 cell_type iPS DF 19 biosample_type Primary culture biosample_term_id CL:0002248 tissue_category iPSC encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed gappedPeak-lifted file_size 9,733,620 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/28/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.iPS_DF_19.11.H3K4me1.SK401.gappedPeak.lifted.bed.gz processed_file_md5 7d7ad23f0a079116c42cfbdf37c5dda6 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.iPS_DF_19.11.H3K4me1.SK401.gappedPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.iPS_DF_19.11.H3K4me1.SK401.gappedPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/gappedPeak/UCSD.iPS_DF_19.11.H3K4me1.SK401.gappedPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/gappedpeak/UCSD.iPS_DF_19.11.H3K4me1.SK401.gappedPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/gappedpeak/ raw_file_md5 3782cf6013cacf2f0195a6cc6eca804a data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=2015;Original_cell_type=iPS DF 19;Donor=SK401;schema=BED3+15;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Stem Cell life_stage Unknown track_name ROADMAP iPS DF 19 ChIP-seq H3K4me1-histone-mark peaks (gappedPeak-lifted) [Histone ChIP-seq peaks]
H3K4me1 • Fibroblast NGRMPNK5SR5QHL • ROADMAP25693563 ChIP-seq Fibroblast Histone Show metadata Download track Track metadata identifier NGRMPNK5SR5QHL data_source ROADMAP Download track Download number_of_intervals 182,405 bp_covered 84,466,908 output_type peaks genome_build hg38 cell_type Fibroblast biosample_type Primary cell biosample_term_id CL:0000057 tissue_category Skin encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed narrowPeak-lifted file_size 5,589,015 downloaded_date 08/15/2018 release_date 11/30/2014 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/UCSF-UBC.Penis_Foreskin_Fibroblast_Primary_Cells.H3K4me1.skin03.narrowPeak.lifted.bed.gz processed_file_md5 ddf5359bcbdab453c304b646389130e1 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/UCSF-UBC.Penis_Foreskin_Fibroblast_Primary_Cells.H3K4me1.skin03.narrowPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/UCSF-UBC.Penis_Foreskin_Fibroblast_Primary_Cells.H3K4me1.skin03.narrowPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/narrowPeak/UCSF-UBC.Penis_Foreskin_Fibroblast_Primary_Cells.H3K4me1.skin03.narrowPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/narrowpeak/UCSF-UBC.Penis_Foreskin_Fibroblast_Primary_Cells.H3K4me1.skin03.narrowPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/narrowpeak/ raw_file_md5 13bc47ba266a831e4b71d09780d04964 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=2015;Original_cell_type=Foreskin fibroblast Primary Cells;Donor=skin03;schema=BED3+10;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Integumentary life_stage Unknown track_name ROADMAP Fibroblast ChIP-seq H3K4me1-histone-mark peaks (narrowPeak-lifted) [Histone ChIP-seq peaks]
H3K4me1 • Hippocampus middle NGRMPNQAOTUJV4 • ROADMAP25693563 ChIP-seq Hippocampus middle Histone Show metadata Download track Track metadata identifier NGRMPNQAOTUJV4 data_source ROADMAP Download track Download number_of_intervals 237,277 bp_covered 558,990,113 output_type peaks genome_build hg38 cell_type Hippocampus middle biosample_type Primary tissue biosample_term_id UBERON:0001954 tissue_category Brain encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed broadPeak-lifted file_size 7,957,764 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/27/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/BI.Brain_Hippocampus_Middle.H3K4me1.149.broadPeak.lifted.bed.gz processed_file_md5 b5401749f85093c6b141008df76df5e1 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/BI.Brain_Hippocampus_Middle.H3K4me1.149.broadPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/BI.Brain_Hippocampus_Middle.H3K4me1.149.broadPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/broadPeak/BI.Brain_Hippocampus_Middle.H3K4me1.149.broadPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/broadpeak/BI.Brain_Hippocampus_Middle.H3K4me1.149.broadPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/broadpeak/ raw_file_md5 b5ba268775db5dad51f69c14fef8f0a9 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=2015;Original_cell_type=Brain Hippocampus Middle;Donor=149;schema=BED3+9;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Nervous life_stage Unknown track_name ROADMAP Hippocampus middle ChIP-seq H3K4me1-histone-mark peaks (broadPeak-lifted) [Histone ChIP-seq peaks]
H3K4me1 • HUES48 NGRMPNQH27KJR2 • ROADMAP25693563 ChIP-seq HUES48 Histone Show metadata Download track Track metadata identifier NGRMPNQH27KJR2 data_source ROADMAP Download track Download number_of_intervals 357,678 bp_covered 161,410,969 output_type peaks genome_build hg38 cell_type HUES48 biosample_type Primary culture biosample_term_id EFO:0007083 tissue_category Embryo encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed narrowPeak-lifted file_size 11,281,916 downloaded_date 08/15/2018 release_date 11/30/2014 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/BI.HUES48.H3K4me1.Lib_EpiLabSPL_Row_1713.narrowPeak.lifted.bed.gz processed_file_md5 a6e6bcd6eb1349607070af20bf11495b wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/BI.HUES48.H3K4me1.Lib_EpiLabSPL_Row_1713.narrowPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/BI.HUES48.H3K4me1.Lib_EpiLabSPL_Row_1713.narrowPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/narrowPeak/BI.HUES48.H3K4me1.Lib_EpiLabSPL_Row_1713.narrowPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/narrowpeak/BI.HUES48.H3K4me1.Lib_EpiLabSPL_Row_1713.narrowPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/narrowpeak/ raw_file_md5 441f707a3b102abb7c54e2b906d6d478 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=2015;Original_cell_type=HUES48;Donor=Lib_EpiLabSPL_Row_1713;schema=BED3+10;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=EFO:0007083;is_hg38_lifted=yes system_category Embryo life_stage Embryonic track_name ROADMAP HUES48 ChIP-seq H3K4me1-histone-mark peaks (narrowPeak-lifted) [Life stage: Embryonic] [Histone ChIP-seq peaks]
H3K4me1 • H9 NGRMPNRBC6D4XA • ROADMAP25693563 ChIP-seq H9 Histone Show metadata Download track Track metadata identifier NGRMPNRBC6D4XA data_source ROADMAP Download track Download number_of_intervals 162,561 bp_covered 335,256,109 output_type peaks genome_build hg38 cell_type H9 biosample_type Stem cell biosample_term_id EFO:0003045 tissue_category Embryo encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed gappedPeak-lifted file_size 8,505,067 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/28/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.H9.H3K4me1.YL123.gappedPeak.lifted.bed.gz processed_file_md5 306dfdbaf60730ce49ef914b9e8f5ee0 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.H9.H3K4me1.YL123.gappedPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.H9.H3K4me1.YL123.gappedPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/gappedPeak/UCSD.H9.H3K4me1.YL123.gappedPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/gappedpeak/UCSD.H9.H3K4me1.YL123.gappedPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/gappedpeak/ raw_file_md5 4020deecb8d0049740744835d97944b7 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=2015;Original_cell_type=H9;Donor=YL123;schema=BED3+15;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=EFO:0003045;is_hg38_lifted=yes system_category Embryo life_stage Embryonic track_name ROADMAP H9 ChIP-seq H3K4me1-histone-mark peaks (gappedPeak-lifted) [Life stage: Embryonic] [Histone ChIP-seq peaks]
H3K4me1 • Spleen NGRMPNREA7ORW2 • ROADMAP25693563 ChIP-seq Spleen Histone Show metadata Download track Track metadata identifier NGRMPNREA7ORW2 data_source ROADMAP Download track Download number_of_intervals 205,813 bp_covered 357,112,914 output_type peaks genome_build hg38 cell_type Spleen biosample_type Primary tissue biosample_term_id UBERON:0002106 tissue_category Immune Organ encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed broadPeak-lifted file_size 6,943,097 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/27/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/UCSD.Spleen.H3K4me1.STL002.broadPeak.lifted.bed.gz processed_file_md5 cb274242856f4430897c050cab41815e wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/UCSD.Spleen.H3K4me1.STL002.broadPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/UCSD.Spleen.H3K4me1.STL002.broadPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/broadPeak/UCSD.Spleen.H3K4me1.STL002.broadPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/broadpeak/UCSD.Spleen.H3K4me1.STL002.broadPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/broadpeak/ raw_file_md5 ec546b38eaa58ec76aa8878031af6632 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=2015;Original_cell_type=Spleen;Donor=STL002;schema=BED3+9;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Lymphatic life_stage Unknown track_name ROADMAP Spleen ChIP-seq H3K4me1-histone-mark peaks (broadPeak-lifted) [Histone ChIP-seq peaks]