H3K4me1 • CD8+ naive T cell NGRMPQWZDO53HH • ROADMAP25693563 ChIP-seq CD8+ naive T cell Histone Show metadata Download track Track metadata identifier NGRMPQWZDO53HH data_source ROADMAP Download track Download number_of_intervals 135,603 bp_covered 135,262,806 output_type peaks genome_build hg38 cell_type CD8+ naive T cell biosample_type Primary cell biosample_term_id CL:0000900 tissue_category Blood encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed narrowPeak-lifted file_size 4,649,200 downloaded_date 08/15/2018 release_date 11/30/2014 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/UCSF-UBC.CD8_Naive_Primary_Cells.H3K4me1.TC001.narrowPeak.lifted.bed.gz processed_file_md5 ff3dff15814817ca0da0683dd24074a9 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/UCSF-UBC.CD8_Naive_Primary_Cells.H3K4me1.TC001.narrowPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/UCSF-UBC.CD8_Naive_Primary_Cells.H3K4me1.TC001.narrowPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/narrowPeak/UCSF-UBC.CD8_Naive_Primary_Cells.H3K4me1.TC001.narrowPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/narrowpeak/UCSF-UBC.CD8_Naive_Primary_Cells.H3K4me1.TC001.narrowPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/narrowpeak/ raw_file_md5 a340b0b1dcba9fec9df836c21ba2ea3d data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=2015;Original_cell_type=CD8 Naive Primary Cells;Donor=TC001;schema=BED3+10;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Cardiovascular life_stage Unknown track_name ROADMAP CD8+ naive T cell ChIP-seq H3K4me1-histone-mark peaks (narrowPeak-lifted) [Histone ChIP-seq peaks]
H3K4me1 • Mobilized CD34+ NGRMPQYLRAAVY7 • ROADMAP25693563 ChIP-seq Mobilized CD34+ Histone Show metadata Download track Track metadata identifier NGRMPQYLRAAVY7 data_source ROADMAP Download track Download number_of_intervals 139,070 bp_covered 306,196,708 output_type peaks genome_build hg38 cell_type Mobilized CD34+ biosample_type Primary cell biosample_term_id CL:0000037 tissue_category Blood encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed gappedPeak-lifted file_size 7,382,725 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/28/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.Mobilized_CD34_Primary_Cells.H3K4me1.Mobilized_CD34_5_28_09.gappedPeak.lifted.bed.gz processed_file_md5 74d5c3573fd35911b9c6b633ea685b2a wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.Mobilized_CD34_Primary_Cells.H3K4me1.Mobilized_CD34_5_28_09.gappedPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.Mobilized_CD34_Primary_Cells.H3K4me1.Mobilized_CD34_5_28_09.gappedPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/gappedPeak/BI.Mobilized_CD34_Primary_Cells.H3K4me1.Mobilized_CD34_5_28_09.gappedPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/gappedpeak/BI.Mobilized_CD34_Primary_Cells.H3K4me1.Mobilized_CD34_5_28_09.gappedPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/gappedpeak/ raw_file_md5 0173d9bf2ce437dac06627422955fe03 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=2015;Original_cell_type=Mobilized CD34 Primary Cells;Donor=Mobilized_CD34_5_28_09;schema=BED3+15;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Cardiovascular life_stage Unknown track_name ROADMAP Mobilized CD34+ ChIP-seq H3K4me1-histone-mark peaks (gappedPeak-lifted) [Histone ChIP-seq peaks]
H3K4me1 • IMR-90 NGRMPQZQXOEPGP • ROADMAP25693563 ChIP-seq IMR-90 Histone Show metadata Download track Track metadata identifier NGRMPQZQXOEPGP data_source ROADMAP Download track Download number_of_intervals 296,788 bp_covered 88,619,862 output_type peaks genome_build hg38 cell_type IMR-90 biosample_type Cell line biosample_term_id EFO:0001196 tissue_category Lung encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed narrowPeak-lifted file_size 9,927,893 downloaded_date 08/15/2018 release_date 11/30/2014 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/UCSD.IMR90.H3K4me1.SK04.narrowPeak.lifted.bed.gz processed_file_md5 8fe1175c4b3fdbb271568061857dcc99 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/UCSD.IMR90.H3K4me1.SK04.narrowPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/UCSD.IMR90.H3K4me1.SK04.narrowPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/narrowPeak/UCSD.IMR90.H3K4me1.SK04.narrowPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/narrowpeak/UCSD.IMR90.H3K4me1.SK04.narrowPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/narrowpeak/ raw_file_md5 a59a021a97c98d5ea3ff16c278aac266 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=2015;Original_cell_type=IMR 90;Donor=SK04;schema=BED3+10;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=EFO:0001196;is_hg38_lifted=yes system_category Respiratory life_stage Unknown track_name ROADMAP IMR-90 ChIP-seq H3K4me1-histone-mark peaks (narrowPeak-lifted) [Histone ChIP-seq peaks]
H3K4me1 • CD34+ NGRMPQZXOZP2CN • ROADMAP25693563 ChIP-seq CD34+ Histone Show metadata Download track Track metadata identifier NGRMPQZXOZP2CN data_source ROADMAP Download track Download number_of_intervals 223,268 bp_covered 112,386,827 output_type peaks genome_build hg38 cell_type CD34+ biosample_type Primary cell biosample_term_id CL:0001059 tissue_category Blood encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed narrowPeak-lifted file_size 6,799,819 downloaded_date 08/15/2018 release_date 11/30/2014 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/BI.CD34_Cultured_Cells.H3K4me1.123.narrowPeak.lifted.bed.gz processed_file_md5 e673910d092b7dc66c82c7a8531153c7 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/BI.CD34_Cultured_Cells.H3K4me1.123.narrowPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/BI.CD34_Cultured_Cells.H3K4me1.123.narrowPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/narrowPeak/BI.CD34_Cultured_Cells.H3K4me1.123.narrowPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/narrowpeak/BI.CD34_Cultured_Cells.H3K4me1.123.narrowPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/narrowpeak/ raw_file_md5 a3c6e67d7d14bda641e06f0d642499ac data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=2015;Original_cell_type=CD34 Cultured Cells;Donor=123;schema=BED3+10;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Cardiovascular life_stage Unknown track_name ROADMAP CD34+ ChIP-seq H3K4me1-histone-mark peaks (narrowPeak-lifted) [Histone ChIP-seq peaks]
H3K4me1 • Adipocyte NGRMPR65WB7YRV • ROADMAP25693563 ChIP-seq Adipocyte Histone Show metadata Download track Track metadata identifier NGRMPR65WB7YRV data_source ROADMAP Download track Download number_of_intervals 280,572 bp_covered 140,498,694 output_type peaks genome_build hg38 cell_type Adipocyte biosample_type In vitro differentiated cells biosample_term_id CL:0000136 tissue_category Stem Cell encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed narrowPeak-lifted file_size 8,780,553 downloaded_date 08/15/2018 release_date 11/30/2014 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/BI.Mesenchymal_Stem_Cell_Derived_Adipocyte_Cultured_Cells.H3K4me1.93.narrowPeak.lifted.bed.gz processed_file_md5 a1c1dc5581d2c2da6acb06528335cdf9 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/BI.Mesenchymal_Stem_Cell_Derived_Adipocyte_Cultured_Cells.H3K4me1.93.narrowPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/BI.Mesenchymal_Stem_Cell_Derived_Adipocyte_Cultured_Cells.H3K4me1.93.narrowPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/narrowPeak/BI.Mesenchymal_Stem_Cell_Derived_Adipocyte_Cultured_Cells.H3K4me1.93.narrowPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/narrowpeak/BI.Mesenchymal_Stem_Cell_Derived_Adipocyte_Cultured_Cells.H3K4me1.93.narrowPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/narrowpeak/ raw_file_md5 f41132991340c8865ae5ae8dadafd699 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=2015;Original_cell_type=Mesenchymal Stem Cell Derived Adipocyte Cultured Cells;Donor=93;schema=BED3+10;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Stem Cell life_stage Unknown track_name ROADMAP Adipocyte ChIP-seq H3K4me1-histone-mark peaks (narrowPeak-lifted) [Histone ChIP-seq peaks]
H3K4me1 • Brain NGRMPRDCKK6NY5 • ROADMAP25693563 ChIP-seq Brain Histone Show metadata Download track Track metadata identifier NGRMPRDCKK6NY5 data_source ROADMAP Download track Download number_of_intervals 130,544 bp_covered 48,383,438 output_type peaks genome_build hg38 cell_type Brain biosample_type Primary tissue biosample_term_id UBERON:0000955 tissue_category Brain encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed narrowPeak-lifted file_size 3,596,702 downloaded_date 08/15/2018 release_date 11/30/2014 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/UCSF-UBC.Fetal_Brain.H3K4me1.HuFNSC01.narrowPeak.lifted.bed.gz processed_file_md5 db0d3d743b944422d81354f302034f5c wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/UCSF-UBC.Fetal_Brain.H3K4me1.HuFNSC01.narrowPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/UCSF-UBC.Fetal_Brain.H3K4me1.HuFNSC01.narrowPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/narrowPeak/UCSF-UBC.Fetal_Brain.H3K4me1.HuFNSC01.narrowPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/narrowpeak/UCSF-UBC.Fetal_Brain.H3K4me1.HuFNSC01.narrowPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/narrowpeak/ raw_file_md5 d9da9b65375623b92bca0143c0a1c623 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=2015;Original_cell_type=Fetal Brain;Donor=HuFNSC01;schema=BED3+10;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Nervous life_stage Fetal track_name ROADMAP Brain ChIP-seq H3K4me1-histone-mark peaks (narrowPeak-lifted) [Life stage: Fetal] [Histone ChIP-seq peaks]
H3K4me1 • Neurosphere cultured cell ganglionic eminence derived NGRMPRDP7XMQIB • ROADMAP25693563 ChIP-seq Neurosphere cultured cell ganglionic eminence derived Histone Show metadata Download track Track metadata identifier NGRMPRDP7XMQIB data_source ROADMAP Download track Download number_of_intervals 201,069 bp_covered 353,928,565 output_type peaks genome_build hg38 cell_type Neurosphere cultured cell ganglionic eminence derived biosample_type Stem cell biosample_term_id CL:0000047 tissue_category Brain encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed broadPeak-lifted file_size 6,967,428 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/27/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/UCSF-UBC.Neurosphere_Cultured_Cells_Ganglionic_Eminence_Derived.H3K4me1.HuFNSC01.broadPeak.lifted.bed.gz processed_file_md5 eedd28ed205530677bfe17f8b30e9f35 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/UCSF-UBC.Neurosphere_Cultured_Cells_Ganglionic_Eminence_Derived.H3K4me1.HuFNSC01.broadPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/UCSF-UBC.Neurosphere_Cultured_Cells_Ganglionic_Eminence_Derived.H3K4me1.HuFNSC01.broadPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/broadPeak/UCSF-UBC.Neurosphere_Cultured_Cells_Ganglionic_Eminence_Derived.H3K4me1.HuFNSC01.broadPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/broadpeak/UCSF-UBC.Neurosphere_Cultured_Cells_Ganglionic_Eminence_Derived.H3K4me1.HuFNSC01.broadPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/broadpeak/ raw_file_md5 fedc5b0fc4af7f73b8e65cca5dabf39c data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=2015;Original_cell_type=Neurosphere Cultured Cells Ganglionic Eminence Derived;Donor=HuFNSC01;schema=BED3+9;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Nervous life_stage Unknown track_name ROADMAP Neurosphere cultured cell ganglionic eminence derived ChIP-seq H3K4me1-histone-mark peaks (broadPeak-lifted) [Histone ChIP-seq peaks]
H3K4me1 • Liver NGRMPREC65RAI7 • ROADMAP25693563 ChIP-seq Liver Histone Show metadata Download track Track metadata identifier NGRMPREC65RAI7 data_source ROADMAP Download track Download number_of_intervals 88,462 bp_covered 326,084,786 output_type peaks genome_build hg38 cell_type Liver biosample_type Primary tissue biosample_term_id UBERON:0002107 tissue_category Liver encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed gappedPeak-lifted file_size 5,168,540 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/28/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.Adult_Liver.H3K4me1.3.gappedPeak.lifted.bed.gz processed_file_md5 01bd5e9d5d4ed570bfda369a8de1d802 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.Adult_Liver.H3K4me1.3.gappedPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.Adult_Liver.H3K4me1.3.gappedPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/gappedPeak/BI.Adult_Liver.H3K4me1.3.gappedPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/gappedpeak/BI.Adult_Liver.H3K4me1.3.gappedPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/gappedpeak/ raw_file_md5 abe1b433f2ba4b59697c3c16485d62ba data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=2015;Original_cell_type=Adult Liver;Donor=3;schema=BED3+15;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Digestive life_stage Adult track_name ROADMAP Liver ChIP-seq H3K4me1-histone-mark peaks (gappedPeak-lifted) [Life stage: Adult] [Histone ChIP-seq peaks]
H3K4me1 • Small intestine NGRMPRESDEARRY • ROADMAP25693563 ChIP-seq Small intestine Histone Show metadata Download track Track metadata identifier NGRMPRESDEARRY data_source ROADMAP Download track Download number_of_intervals 276,098 bp_covered 268,038,058 output_type peaks genome_build hg38 cell_type Small intestine biosample_type Primary tissue biosample_term_id UBERON:0002108 tissue_category Digestive encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed broadPeak-lifted file_size 8,542,824 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/27/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/UCSD.Small_Intestine.H3K4me1.STL002.broadPeak.lifted.bed.gz processed_file_md5 4793ec01aca054a589877c90d1f4c25d wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/UCSD.Small_Intestine.H3K4me1.STL002.broadPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/UCSD.Small_Intestine.H3K4me1.STL002.broadPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/broadPeak/UCSD.Small_Intestine.H3K4me1.STL002.broadPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/broadpeak/UCSD.Small_Intestine.H3K4me1.STL002.broadPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/broadpeak/ raw_file_md5 f5ed886d16244e1b54d1e16905b096eb data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=2015;Original_cell_type=Small Intestine;Donor=STL002;schema=BED3+9;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Digestive life_stage Unknown track_name ROADMAP Small intestine ChIP-seq H3K4me1-histone-mark peaks (broadPeak-lifted) [Histone ChIP-seq peaks]
H3K4me1 • Smooth muscle tissue NGRMPRH3H7ZWFA • ROADMAP25693563 ChIP-seq Smooth muscle tissue Histone Show metadata Download track Track metadata identifier NGRMPRH3H7ZWFA data_source ROADMAP Download track Download number_of_intervals 393,511 bp_covered 554,090,767 output_type peaks genome_build hg38 cell_type Smooth muscle tissue biosample_type Primary tissue biosample_term_id UBERON:0001135 tissue_category Digestive encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed broadPeak-lifted file_size 12,618,512 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/27/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/BI.Stomach_Smooth_Muscle.H3K4me1.28.broadPeak.lifted.bed.gz processed_file_md5 1bd642bede910353d050a735c1e57071 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/BI.Stomach_Smooth_Muscle.H3K4me1.28.broadPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/BI.Stomach_Smooth_Muscle.H3K4me1.28.broadPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/broadPeak/BI.Stomach_Smooth_Muscle.H3K4me1.28.broadPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/broadpeak/BI.Stomach_Smooth_Muscle.H3K4me1.28.broadPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/broadpeak/ raw_file_md5 e8c1cea5c62be3a512f14a1ebdf283d4 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=2015;Original_cell_type=Stomach Smooth Muscle;Donor=28;schema=BED3+9;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Digestive life_stage Unknown track_name ROADMAP Smooth muscle tissue ChIP-seq H3K4me1-histone-mark peaks (broadPeak-lifted) [Histone ChIP-seq peaks]
H3K4me1 • iPS DF 19 NGRMPRHKJBIZDI • ROADMAP25693563 ChIP-seq iPS DF 19 Histone Show metadata Download track Track metadata identifier NGRMPRHKJBIZDI data_source ROADMAP Download track Download number_of_intervals 383,521 bp_covered 89,578,985 output_type peaks genome_build hg38 cell_type iPS DF 19 biosample_type Primary culture biosample_term_id CL:0002248 tissue_category iPSC encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed narrowPeak-lifted file_size 10,878,713 downloaded_date 08/15/2018 release_date 11/30/2014 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/UCSD.iPS_DF_19.11.H3K4me1.SK401.narrowPeak.lifted.bed.gz processed_file_md5 94bd4179271d42feffc7b048d383045f wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/UCSD.iPS_DF_19.11.H3K4me1.SK401.narrowPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/UCSD.iPS_DF_19.11.H3K4me1.SK401.narrowPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/narrowPeak/UCSD.iPS_DF_19.11.H3K4me1.SK401.narrowPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/narrowpeak/UCSD.iPS_DF_19.11.H3K4me1.SK401.narrowPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/narrowpeak/ raw_file_md5 7050f3be7bad43f1fd98bcf0903b3401 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=2015;Original_cell_type=iPS DF 19;Donor=SK401;schema=BED3+10;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Stem Cell life_stage Unknown track_name ROADMAP iPS DF 19 ChIP-seq H3K4me1-histone-mark peaks (narrowPeak-lifted) [Histone ChIP-seq peaks]
H3K4me1 • CD4+ memory NGRMPRHYMPIAHS • ROADMAP25693563 ChIP-seq CD4+ memory Histone Show metadata Download track Track metadata identifier NGRMPRHYMPIAHS data_source ROADMAP Download track Download number_of_intervals 150,386 bp_covered 405,910,002 output_type peaks genome_build hg38 cell_type CD4+ memory biosample_type Primary cell biosample_term_id CL:0000897 tissue_category Blood encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed broadPeak-lifted file_size 5,138,988 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/27/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/BI.CD4_Memory_Primary_Cells.H3K4me1.Donor_100_7_pooled_leukopaks_Jan_7_2011.broadPeak.lifted.bed.gz processed_file_md5 021bd2d3eb2b627913b80adad16d9a2b wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/BI.CD4_Memory_Primary_Cells.H3K4me1.Donor_100_7_pooled_leukopaks_Jan_7_2011.broadPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/BI.CD4_Memory_Primary_Cells.H3K4me1.Donor_100_7_pooled_leukopaks_Jan_7_2011.broadPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/broadPeak/BI.CD4_Memory_Primary_Cells.H3K4me1.Donor_100_7_pooled_leukopaks_Jan_7_2011.broadPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/broadpeak/BI.CD4_Memory_Primary_Cells.H3K4me1.Donor_100_7_pooled_leukopaks_Jan_7_2011.broadPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/broadpeak/ raw_file_md5 9410cc6a10d21bb21da6f4eddd980082 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=2015;Original_cell_type=CD4 Memory Primary Cells;Donor=100_7_pooled_leukopaks_Jan_7_2011;schema=BED3+9;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Cardiovascular life_stage Unknown track_name ROADMAP CD4+ memory ChIP-seq H3K4me1-histone-mark peaks (broadPeak-lifted) [Histone ChIP-seq peaks]
H3K4me1 • ES-WA7 NGRMPRHYY4QQ5Q • ROADMAP25693563 ChIP-seq ES-WA7 Histone Show metadata Download track Track metadata identifier NGRMPRHYY4QQ5Q data_source ROADMAP Download track Download number_of_intervals 97,117 bp_covered 216,252,126 output_type peaks genome_build hg38 cell_type ES-WA7 biosample_type Stem cell biosample_term_id CL:0002322 tissue_category Embryo encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed gappedPeak-lifted file_size 4,867,314 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/28/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.ES-WA7.H3K4me1.Solexa-12611.gappedPeak.lifted.bed.gz processed_file_md5 d22f9f484b682b28e92971210a290a59 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.ES-WA7.H3K4me1.Solexa-12611.gappedPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.ES-WA7.H3K4me1.Solexa-12611.gappedPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/gappedPeak/BI.ES-WA7.H3K4me1.Solexa-12611.gappedPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/gappedpeak/BI.ES-WA7.H3K4me1.Solexa-12611.gappedPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/gappedpeak/ raw_file_md5 e17ebee573679f1603bd24ef359c61d8 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=2015;Original_cell_type=ES-WA7;Donor=Solexa-12611;schema=BED3+15;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Embryo life_stage Embryonic track_name ROADMAP ES-WA7 ChIP-seq H3K4me1-histone-mark peaks (gappedPeak-lifted) [Life stage: Embryonic] [Histone ChIP-seq peaks]
H3K4me1 • HUES6 NGRMPRKDZAT4DE • ROADMAP25693563 ChIP-seq HUES6 Histone Show metadata Download track Track metadata identifier NGRMPRKDZAT4DE data_source ROADMAP Download track Download number_of_intervals 344,062 bp_covered 163,386,246 output_type peaks genome_build hg38 cell_type HUES6 biosample_type Primary culture biosample_term_id EFO:0007086 tissue_category Embryo encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed narrowPeak-lifted file_size 11,230,145 downloaded_date 08/15/2018 release_date 11/30/2014 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/BI.HUES6.H3K4me1.Lib_XZ_20101004_08--ChIP_XZ_20100930_08_ES_cell_HUES_6_H3K4Me1.narrowPeak.lifted.bed.gz processed_file_md5 219b599917b8aff26ec0b8bb4120f94b wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/BI.HUES6.H3K4me1.Lib_XZ_20101004_08--ChIP_XZ_20100930_08_ES_cell_HUES_6_H3K4Me1.narrowPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/BI.HUES6.H3K4me1.Lib_XZ_20101004_08--ChIP_XZ_20100930_08_ES_cell_HUES_6_H3K4Me1.narrowPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/narrowPeak/BI.HUES6.H3K4me1.Lib_XZ_20101004_08--ChIP_XZ_20100930_08_ES_cell_HUES_6_H3K4Me1.narrowPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/narrowpeak/BI.HUES6.H3K4me1.Lib_XZ_20101004_08--ChIP_XZ_20100930_08_ES_cell_HUES_6_H3K4Me1.narrowPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/narrowpeak/ raw_file_md5 32e3a4c4a8bb1f60dc1799a64e65ff46 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=2015;Original_cell_type=HUES6;Donor=Lib_XZ_20101004_08--ChIP_XZ_20100930_08_ES_cell_HUES_6_H3K4Me1;schema=BED3+10;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=EFO:0007086;is_hg38_lifted=yes system_category Embryo life_stage Embryonic track_name ROADMAP HUES6 ChIP-seq H3K4me1-histone-mark peaks (narrowPeak-lifted) [Life stage: Embryonic] [Histone ChIP-seq peaks]
H3K4me1 • iPS-20b NGRMPRLGRBVX4M • ROADMAP25693563 ChIP-seq iPS-20b Histone Show metadata Download track Track metadata identifier NGRMPRLGRBVX4M data_source ROADMAP Download track Download number_of_intervals 301,218 bp_covered 578,789,137 output_type peaks genome_build hg38 cell_type iPS-20b biosample_type Primary culture biosample_term_id EFO:0007108 tissue_category iPSC encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed broadPeak-lifted file_size 10,274,432 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/27/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/BI.iPS-20b.H3K4me1.DNA_Lib_354.broadPeak.lifted.bed.gz processed_file_md5 72005788d244ec7c0e143515d817b01c wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/BI.iPS-20b.H3K4me1.DNA_Lib_354.broadPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/BI.iPS-20b.H3K4me1.DNA_Lib_354.broadPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/broadPeak/BI.iPS-20b.H3K4me1.DNA_Lib_354.broadPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/broadpeak/BI.iPS-20b.H3K4me1.DNA_Lib_354.broadPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/broadpeak/ raw_file_md5 791988bfec465432b93f9c2b279acf07 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=2015;Original_cell_type=iPS-20b;Donor=DNA_Lib_354;schema=BED3+9;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=EFO:0007108;is_hg38_lifted=yes system_category Stem Cell life_stage Unknown track_name ROADMAP iPS-20b ChIP-seq H3K4me1-histone-mark peaks (broadPeak-lifted) [Histone ChIP-seq peaks]
H3K4me1 • Mesenchymal stem cell NGRMPRLP7GAN6P • ROADMAP25693563 ChIP-seq Mesenchymal stem cell Histone Show metadata Download track Track metadata identifier NGRMPRLP7GAN6P data_source ROADMAP Download track Download number_of_intervals 224,552 bp_covered 412,905,815 output_type peaks genome_build hg38 cell_type Mesenchymal stem cell biosample_type Stem cell biosample_term_id CL:0000134 tissue_category Connective Tissue encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed broadPeak-lifted file_size 7,739,892 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/27/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/BI.Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K4me1.57.broadPeak.lifted.bed.gz processed_file_md5 5db9c3866f3045c2787fb1b47f4c7361 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/BI.Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K4me1.57.broadPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/BI.Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K4me1.57.broadPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/1/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/broadPeak/BI.Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K4me1.57.broadPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/broadpeak/BI.Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K4me1.57.broadPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/broadpeak/ raw_file_md5 ab5795ce5211a8c2220520ad5b498e4a data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=2015;Original_cell_type=Bone Marrow Derived Mesenchymal Stem Cell Cultured Cells;Donor=57;schema=BED3+9;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Skeletal life_stage Unknown track_name ROADMAP Mesenchymal stem cell ChIP-seq H3K4me1-histone-mark peaks (broadPeak-lifted) [Histone ChIP-seq peaks]
H3K4me1 • CD184+ endoderm cell NGRMPRQ5X64SG3 • ROADMAP25693563 ChIP-seq CD184+ endoderm cell Histone Show metadata Download track Track metadata identifier NGRMPRQ5X64SG3 data_source ROADMAP Download track Download number_of_intervals 131,835 bp_covered 407,879,891 output_type peaks genome_build hg38 cell_type CD184+ endoderm cell biosample_type In vitro differentiated cells biosample_term_id CL:0000223 tissue_category Stem Cell encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed gappedPeak-lifted file_size 7,155,430 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/28/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.hESC_Derived_CD184+_Endoderm_Cultured_Cells.H3K4me1.DNA_Lib_2067.gappedPeak.lifted.bed.gz processed_file_md5 0b33262efe59b4651b4d688ca3d26a9a wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.hESC_Derived_CD184+_Endoderm_Cultured_Cells.H3K4me1.DNA_Lib_2067.gappedPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.hESC_Derived_CD184+_Endoderm_Cultured_Cells.H3K4me1.DNA_Lib_2067.gappedPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/gappedPeak/BI.hESC_Derived_CD184+_Endoderm_Cultured_Cells.H3K4me1.DNA_Lib_2067.gappedPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/gappedpeak/BI.hESC_Derived_CD184+_Endoderm_Cultured_Cells.H3K4me1.DNA_Lib_2067.gappedPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/gappedpeak/ raw_file_md5 4453e8b0d08b32a62ceb2941f76550ed data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=2015;Original_cell_type=hESC Derived CD184+ Endoderm Cultured Cells;Donor=DNA_Lib_2067;schema=BED3+15;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Stem Cell life_stage Unknown track_name ROADMAP CD184+ endoderm cell ChIP-seq H3K4me1-histone-mark peaks (gappedPeak-lifted) [Histone ChIP-seq peaks]
H3K4me1 • CD184+ endoderm cell NGRMPRSRQP6REZ • ROADMAP25693563 ChIP-seq CD184+ endoderm cell Histone Show metadata Download track Track metadata identifier NGRMPRSRQP6REZ data_source ROADMAP Download track Download number_of_intervals 115,285 bp_covered 371,019,698 output_type peaks genome_build hg38 cell_type CD184+ endoderm cell biosample_type In vitro differentiated cells biosample_term_id CL:0000223 tissue_category Stem Cell encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed gappedPeak-lifted file_size 6,288,914 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/28/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.hESC_Derived_CD184+_Endoderm_Cultured_Cells.H3K4me1.DNA_Lib_3190.gappedPeak.lifted.bed.gz processed_file_md5 5baf3d3f072aef55519f8fe59a304a74 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.hESC_Derived_CD184+_Endoderm_Cultured_Cells.H3K4me1.DNA_Lib_3190.gappedPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.hESC_Derived_CD184+_Endoderm_Cultured_Cells.H3K4me1.DNA_Lib_3190.gappedPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/gappedPeak/BI.hESC_Derived_CD184+_Endoderm_Cultured_Cells.H3K4me1.DNA_Lib_3190.gappedPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/gappedpeak/BI.hESC_Derived_CD184+_Endoderm_Cultured_Cells.H3K4me1.DNA_Lib_3190.gappedPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/gappedpeak/ raw_file_md5 297a0df534792c9913ed978e5babdfa6 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=2015;Original_cell_type=hESC Derived CD184+ Endoderm Cultured Cells;Donor=DNA_Lib_3190;schema=BED3+15;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Stem Cell life_stage Unknown track_name ROADMAP CD184+ endoderm cell ChIP-seq H3K4me1-histone-mark peaks (gappedPeak-lifted) [Histone ChIP-seq peaks]
H3K4me1 • Neuronal progenitor cell NGRMPRTA5TRGDP • ROADMAP25693563 ChIP-seq Neuronal progenitor cell Histone Show metadata Download track Track metadata identifier NGRMPRTA5TRGDP data_source ROADMAP Download track Download number_of_intervals 211,825 bp_covered 46,835,544 output_type peaks genome_build hg38 cell_type Neuronal progenitor cell biosample_type In vitro differentiated cells biosample_term_id CL:0000047 tissue_category Stem Cell encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed narrowPeak-lifted file_size 6,362,731 downloaded_date 08/15/2018 release_date 11/30/2014 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H3K4me1.AK242.narrowPeak.lifted.bed.gz processed_file_md5 a9ff72ab362b00e7e95b2146360d6c02 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H3K4me1.AK242.narrowPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H3K4me1.AK242.narrowPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/narrowPeak/UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H3K4me1.AK242.narrowPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/narrowpeak/UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H3K4me1.AK242.narrowPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/narrowpeak/ raw_file_md5 88b590d2cf8f2ca8438c52c7a6cc8ab8 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=2015;Original_cell_type=H1 Derived Neuronal Progenitor Cultured Cells;Donor=AK242;schema=BED3+10;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Stem Cell life_stage Embryonic track_name ROADMAP Neuronal progenitor cell ChIP-seq H3K4me1-histone-mark peaks (narrowPeak-lifted) [Life stage: Embryonic] [Histone ChIP-seq peaks]
H3K4me1 • CD15+ NGRMPRTLJCKOYR • ROADMAP25693563 ChIP-seq CD15+ Histone Show metadata Download track Track metadata identifier NGRMPRTLJCKOYR data_source ROADMAP Download track Download number_of_intervals 59,948 bp_covered 199,783,411 output_type peaks genome_build hg38 cell_type CD15+ biosample_type Primary cell biosample_term_id Not available tissue_category Blood encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed gappedPeak-lifted file_size 3,296,012 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/28/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.CD15_Primary_Cells.H3K4me1.23.gappedPeak.lifted.bed.gz processed_file_md5 930a07de4c0f37b7432e367b9f681431 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.CD15_Primary_Cells.H3K4me1.23.gappedPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.CD15_Primary_Cells.H3K4me1.23.gappedPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/gappedPeak/BI.CD15_Primary_Cells.H3K4me1.23.gappedPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/gappedpeak/BI.CD15_Primary_Cells.H3K4me1.23.gappedPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/gappedpeak/ raw_file_md5 2e3e913a04f4db1b252d3c352912480b data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=2015;Original_cell_type=CD15 Primary Cells;Donor=23;schema=BED3+15;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Cardiovascular life_stage Unknown track_name ROADMAP CD15+ ChIP-seq H3K4me1-histone-mark peaks (gappedPeak-lifted) [Histone ChIP-seq peaks]