H3K4me2 • H1-hESC NGRMPIP2M2WOVD • ROADMAP25693563 ChIP-seq H1-hESC Histone Show metadata Download track Track metadata identifier NGRMPIP2M2WOVD data_source ROADMAP Download track Download number_of_intervals 85,392 bp_covered 166,715,049 output_type peaks genome_build hg38 cell_type H1-hESC biosample_type Stem cell biosample_term_id EFO:0003042 tissue_category Embryo encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me2 assay ChIP-seq file_format bed gappedPeak-lifted file_size 4,664,787 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/28/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.H1.H3K4me2.LL322.gappedPeak.lifted.bed.gz processed_file_md5 4269f9696c30015ffd0b541bd6e9011f wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.H1.H3K4me2.LL322.gappedPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.H1.H3K4me2.LL322.gappedPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/gappedPeak/UCSD.H1.H3K4me2.LL322.gappedPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/gappedpeak/UCSD.H1.H3K4me2.LL322.gappedPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/gappedpeak/ raw_file_md5 58e08bbd10da9a08d734a23f2b1ee769 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me2 peaks track_description version=2015;Original_cell_type=H1;Donor=LL322;schema=BED3+15;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=EFO:0003042;is_hg38_lifted=yes system_category Embryo life_stage Embryonic track_name ROADMAP H1-hESC ChIP-seq H3K4me2-histone-mark peaks (gappedPeak-lifted) [Life stage: Embryonic] [Histone ChIP-seq peaks]
H3K4me2 • Neuronal progenitor cell NGRMPJUMVG4ZSJ • ROADMAP25693563 ChIP-seq Neuronal progenitor cell Histone Show metadata Download track Track metadata identifier NGRMPJUMVG4ZSJ data_source ROADMAP Download track Download number_of_intervals 111,931 bp_covered 154,178,673 output_type peaks genome_build hg38 cell_type Neuronal progenitor cell biosample_type In vitro differentiated cells biosample_term_id CL:0000047 tissue_category Stem Cell encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me2 assay ChIP-seq file_format bed gappedPeak-lifted file_size 5,443,455 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/28/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H3K4me2.AK260.gappedPeak.lifted.bed.gz processed_file_md5 2b5d30c897cabfb169d356a01c6959bf wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H3K4me2.AK260.gappedPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H3K4me2.AK260.gappedPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/gappedPeak/UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H3K4me2.AK260.gappedPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/gappedpeak/UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H3K4me2.AK260.gappedPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/gappedpeak/ raw_file_md5 22fb2bf9434b17c7b97b8ce12d272e0b data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me2 peaks track_description version=2015;Original_cell_type=H1 Derived Neuronal Progenitor Cultured Cells;Donor=AK260;schema=BED3+15;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Stem Cell life_stage Embryonic track_name ROADMAP Neuronal progenitor cell ChIP-seq H3K4me2-histone-mark peaks (gappedPeak-lifted) [Life stage: Embryonic] [Histone ChIP-seq peaks]
H3K4me2 • Muscle satellite cultured cell NGRMPK4NFLZQRM • ROADMAP25693563 ChIP-seq Muscle satellite cultured cell Histone Show metadata Download track Track metadata identifier NGRMPK4NFLZQRM data_source ROADMAP Download track Download number_of_intervals 117,915 bp_covered 172,049,115 output_type peaks genome_build hg38 cell_type Muscle satellite cultured cell biosample_type Primary culture biosample_term_id CL:0000594 tissue_category Skeletal Muscle encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me2 assay ChIP-seq file_format bed broadPeak-lifted file_size 4,163,959 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/27/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/BI.Muscle_Satellite_Cultured_Cells.H3K4me2.hSKM-2.broadPeak.lifted.bed.gz processed_file_md5 3ca52749ad60f2683ea7ad7640da9bbf wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/BI.Muscle_Satellite_Cultured_Cells.H3K4me2.hSKM-2.broadPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/BI.Muscle_Satellite_Cultured_Cells.H3K4me2.hSKM-2.broadPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/broadPeak/BI.Muscle_Satellite_Cultured_Cells.H3K4me2.hSKM-2.broadPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/broadpeak/BI.Muscle_Satellite_Cultured_Cells.H3K4me2.hSKM-2.broadPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/broadpeak/ raw_file_md5 eda482a745143e15566334c5f698261f data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me2 peaks track_description version=2015;Original_cell_type=Muscle Satellite Cultured Cells;Donor=hSKM-2;schema=BED3+9;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Muscular life_stage Unknown track_name ROADMAP Muscle satellite cultured cell ChIP-seq H3K4me2-histone-mark peaks (broadPeak-lifted) [Histone ChIP-seq peaks]
H3K4me2 • Mesendoderm NGRMPK7BGQOUZ5 • ROADMAP25693563 ChIP-seq Mesendoderm Histone Show metadata Download track Track metadata identifier NGRMPK7BGQOUZ5 data_source ROADMAP Download track Download number_of_intervals 960,090 bp_covered 720,305,185 output_type peaks genome_build hg38 cell_type Mesendoderm biosample_type In vitro differentiated cells biosample_term_id BTO:0003953 tissue_category Embryo encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me2 assay ChIP-seq file_format bed broadPeak-lifted file_size 31,277,963 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/27/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.H3K4me2.AK134.broadPeak.lifted.bed.gz processed_file_md5 8ed6e83d2ffb4cc82353e631eb3e0c73 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.H3K4me2.AK134.broadPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.H3K4me2.AK134.broadPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/broadPeak/UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.H3K4me2.AK134.broadPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/broadpeak/UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.H3K4me2.AK134.broadPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/broadpeak/ raw_file_md5 58695c2c7038344664623e4d84dc020b data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me2 peaks track_description version=2015;Original_cell_type=H1 BMP4 Derived Mesendoderm Cultured Cells;Donor=AK134;schema=BED3+9;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=NTR:0000856;is_hg38_lifted=yes system_category Embryo life_stage Embryonic track_name ROADMAP Mesendoderm ChIP-seq H3K4me2-histone-mark peaks (broadPeak-lifted) [Life stage: Embryonic] [Histone ChIP-seq peaks]
H3K4me2 • Muscle satellite cultured cell NGRMPKHUCVDATM • ROADMAP25693563 ChIP-seq Muscle satellite cultured cell Histone Show metadata Download track Track metadata identifier NGRMPKHUCVDATM data_source ROADMAP Download track Download number_of_intervals 175,254 bp_covered 220,095,041 output_type peaks genome_build hg38 cell_type Muscle satellite cultured cell biosample_type Primary culture biosample_term_id CL:0000594 tissue_category Skeletal Muscle encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me2 assay ChIP-seq file_format bed broadPeak-lifted file_size 5,990,435 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/27/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/BI.Muscle_Satellite_Cultured_Cells.H3K4me2.hSKM-1.broadPeak.lifted.bed.gz processed_file_md5 954770d617c620881396159a1dd04ffd wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/BI.Muscle_Satellite_Cultured_Cells.H3K4me2.hSKM-1.broadPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/BI.Muscle_Satellite_Cultured_Cells.H3K4me2.hSKM-1.broadPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/broadPeak/BI.Muscle_Satellite_Cultured_Cells.H3K4me2.hSKM-1.broadPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/broadpeak/BI.Muscle_Satellite_Cultured_Cells.H3K4me2.hSKM-1.broadPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/broadpeak/ raw_file_md5 edcb4f47d4979e79a89ba1c6ba4bb8dd data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me2 peaks track_description version=2015;Original_cell_type=Muscle Satellite Cultured Cells;Donor=hSKM-1;schema=BED3+9;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Muscular life_stage Unknown track_name ROADMAP Muscle satellite cultured cell ChIP-seq H3K4me2-histone-mark peaks (broadPeak-lifted) [Histone ChIP-seq peaks]
H3K4me2 • Mesendoderm NGRMPLU263JQB2 • ROADMAP25693563 ChIP-seq Mesendoderm Histone Show metadata Download track Track metadata identifier NGRMPLU263JQB2 data_source ROADMAP Download track Download number_of_intervals 59,649 bp_covered 125,198,629 output_type peaks genome_build hg38 cell_type Mesendoderm biosample_type In vitro differentiated cells biosample_term_id BTO:0003953 tissue_category Embryo encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me2 assay ChIP-seq file_format bed gappedPeak-lifted file_size 3,184,050 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/28/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.H3K4me2.AK164.gappedPeak.lifted.bed.gz processed_file_md5 72e698d54cfa517202ae41ee25fdbdd5 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.H3K4me2.AK164.gappedPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.H3K4me2.AK164.gappedPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/gappedPeak/UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.H3K4me2.AK164.gappedPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/gappedpeak/UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.H3K4me2.AK164.gappedPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/gappedpeak/ raw_file_md5 56a595a075c7189547911559f17a82b3 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me2 peaks track_description version=2015;Original_cell_type=H1 BMP4 Derived Mesendoderm Cultured Cells;Donor=AK164;schema=BED3+15;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=NTR:0000856;is_hg38_lifted=yes system_category Embryo life_stage Embryonic track_name ROADMAP Mesendoderm ChIP-seq H3K4me2-histone-mark peaks (gappedPeak-lifted) [Life stage: Embryonic] [Histone ChIP-seq peaks]
H3K4me2 • H9 NGRMPNG3BQGDV4 • ROADMAP25693563 ChIP-seq H9 Histone Show metadata Download track Track metadata identifier NGRMPNG3BQGDV4 data_source ROADMAP Download track Download number_of_intervals 748,087 bp_covered 298,992,088 output_type peaks genome_build hg38 cell_type H9 biosample_type Stem cell biosample_term_id EFO:0003045 tissue_category Embryo encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me2 assay ChIP-seq file_format bed broadPeak-lifted file_size 21,977,079 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/27/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/UCSD.H9.H3K4me2.SK198.broadPeak.lifted.bed.gz processed_file_md5 f5dfdf3b5cbdb04794253d6fc47d4bc2 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/UCSD.H9.H3K4me2.SK198.broadPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/UCSD.H9.H3K4me2.SK198.broadPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/broadPeak/UCSD.H9.H3K4me2.SK198.broadPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/broadpeak/UCSD.H9.H3K4me2.SK198.broadPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/broadpeak/ raw_file_md5 0f2556609d2e8afbe4fafc0a5908bea7 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me2 peaks track_description version=2015;Original_cell_type=H9;Donor=SK198;schema=BED3+9;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=EFO:0003045;is_hg38_lifted=yes system_category Embryo life_stage Embryonic track_name ROADMAP H9 ChIP-seq H3K4me2-histone-mark peaks (broadPeak-lifted) [Life stage: Embryonic] [Histone ChIP-seq peaks]
H3K4me2 • Trophoblast NGRMPOC2JD2EU4 • ROADMAP25693563 ChIP-seq Trophoblast Histone Show metadata Download track Track metadata identifier NGRMPOC2JD2EU4 data_source ROADMAP Download track Download number_of_intervals 791,836 bp_covered 521,257,134 output_type peaks genome_build hg38 cell_type Trophoblast biosample_type In vitro differentiated cells biosample_term_id UBERON:0000088 tissue_category Embryo encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me2 assay ChIP-seq file_format bed broadPeak-lifted file_size 25,866,505 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/27/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H3K4me2.SK498.broadPeak.lifted.bed.gz processed_file_md5 9b1154032d5b4fbc5559b72a29b2394c wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H3K4me2.SK498.broadPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H3K4me2.SK498.broadPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/broadPeak/UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H3K4me2.SK498.broadPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/broadpeak/UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H3K4me2.SK498.broadPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/broadpeak/ raw_file_md5 3ef55807c6c2e90be7eb0a5dbea6f7f5 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me2 peaks track_description version=2015;Original_cell_type=H1 BMP4 Derived Trophoblast Cultured Cells;Donor=SK498;schema=BED3+9;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=NTR:0000856;is_hg38_lifted=yes system_category Embryo life_stage Embryonic track_name ROADMAP Trophoblast ChIP-seq H3K4me2-histone-mark peaks (broadPeak-lifted) [Life stage: Embryonic] [Histone ChIP-seq peaks]
H3K4me2 • Mesenchymal stem cell NGRMPOWC2DZF63 • ROADMAP25693563 ChIP-seq Mesenchymal stem cell Histone Show metadata Download track Track metadata identifier NGRMPOWC2DZF63 data_source ROADMAP Download track Download number_of_intervals 164,510 bp_covered 175,158,410 output_type peaks genome_build hg38 cell_type Mesenchymal stem cell biosample_type Stem cell biosample_term_id CL:0000134 tissue_category Connective Tissue encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me2 assay ChIP-seq file_format bed gappedPeak-lifted file_size 7,906,827 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/28/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.H1_Derived_Mesenchymal_Stem_Cells.H3K4me2.SK521.gappedPeak.lifted.bed.gz processed_file_md5 eb7c780c1fde8fcce64c741c5b5c163a wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.H1_Derived_Mesenchymal_Stem_Cells.H3K4me2.SK521.gappedPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.H1_Derived_Mesenchymal_Stem_Cells.H3K4me2.SK521.gappedPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/gappedPeak/UCSD.H1_Derived_Mesenchymal_Stem_Cells.H3K4me2.SK521.gappedPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/gappedpeak/UCSD.H1_Derived_Mesenchymal_Stem_Cells.H3K4me2.SK521.gappedPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/gappedpeak/ raw_file_md5 d4ee8cff3f88c9e4c71d679e0dc73859 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me2 peaks track_description version=2015;Original_cell_type=H1 Derived Mesenchymal Stem Cells;Donor=SK521;schema=BED3+15;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Skeletal life_stage Embryonic track_name ROADMAP Mesenchymal stem cell ChIP-seq H3K4me2-histone-mark peaks (gappedPeak-lifted) [Life stage: Embryonic] [Histone ChIP-seq peaks]
H3K4me2 • H1-hESC NGRMPP55JUQVQH • ROADMAP25693563 ChIP-seq H1-hESC Histone Show metadata Download track Track metadata identifier NGRMPP55JUQVQH data_source ROADMAP Download track Download number_of_intervals 181,339 bp_covered 66,218,714 output_type peaks genome_build hg38 cell_type H1-hESC biosample_type Stem cell biosample_term_id EFO:0003042 tissue_category Embryo encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me2 assay ChIP-seq file_format bed narrowPeak-lifted file_size 5,985,244 downloaded_date 08/15/2018 release_date 11/30/2014 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/UCSD.H1.H3K4me2.LL322.narrowPeak.lifted.bed.gz processed_file_md5 c7edbd6867222ed5072529bd44dc0fd9 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/UCSD.H1.H3K4me2.LL322.narrowPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/UCSD.H1.H3K4me2.LL322.narrowPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/narrowPeak/UCSD.H1.H3K4me2.LL322.narrowPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/narrowpeak/UCSD.H1.H3K4me2.LL322.narrowPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/narrowpeak/ raw_file_md5 9fa7ed9c96db382782ac0388bc81e6d7 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me2 peaks track_description version=2015;Original_cell_type=H1;Donor=LL322;schema=BED3+10;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=EFO:0003042;is_hg38_lifted=yes system_category Embryo life_stage Embryonic track_name ROADMAP H1-hESC ChIP-seq H3K4me2-histone-mark peaks (narrowPeak-lifted) [Life stage: Embryonic] [Histone ChIP-seq peaks]
H3K4me2 • IMR-90 NGRMPPDNEGE2XR • ROADMAP25693563 ChIP-seq IMR-90 Histone Show metadata Download track Track metadata identifier NGRMPPDNEGE2XR data_source ROADMAP Download track Download number_of_intervals 90,999 bp_covered 146,954,808 output_type peaks genome_build hg38 cell_type IMR-90 biosample_type Cell line biosample_term_id EFO:0001196 tissue_category Lung encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me2 assay ChIP-seq file_format bed gappedPeak-lifted file_size 4,873,419 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/28/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.IMR90.H3K4me2.SK07.gappedPeak.lifted.bed.gz processed_file_md5 102cd7e31a553a61fb92b7f017577265 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.IMR90.H3K4me2.SK07.gappedPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.IMR90.H3K4me2.SK07.gappedPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/gappedPeak/UCSD.IMR90.H3K4me2.SK07.gappedPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/gappedpeak/UCSD.IMR90.H3K4me2.SK07.gappedPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/gappedpeak/ raw_file_md5 e14c69f455eb54b2e7025c5e22779373 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me2 peaks track_description version=2015;Original_cell_type=IMR 90;Donor=SK07;schema=BED3+15;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=EFO:0001196;is_hg38_lifted=yes system_category Respiratory life_stage Unknown track_name ROADMAP IMR-90 ChIP-seq H3K4me2-histone-mark peaks (gappedPeak-lifted) [Histone ChIP-seq peaks]
H3K4me2 • Mesendoderm NGRMPQN2RSG2AE • ROADMAP25693563 ChIP-seq Mesendoderm Histone Show metadata Download track Track metadata identifier NGRMPQN2RSG2AE data_source ROADMAP Download track Download number_of_intervals 535,163 bp_covered 359,954,801 output_type peaks genome_build hg38 cell_type Mesendoderm biosample_type In vitro differentiated cells biosample_term_id BTO:0003953 tissue_category Embryo encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me2 assay ChIP-seq file_format bed broadPeak-lifted file_size 17,129,984 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/27/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.H3K4me2.AK164.broadPeak.lifted.bed.gz processed_file_md5 fb7940e0397f106b9e7619aa20372cb5 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.H3K4me2.AK164.broadPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.H3K4me2.AK164.broadPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/broadPeak/UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.H3K4me2.AK164.broadPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/broadpeak/UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.H3K4me2.AK164.broadPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/broadpeak/ raw_file_md5 408d76ac9b31252c7cc61f66f512fe07 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me2 peaks track_description version=2015;Original_cell_type=H1 BMP4 Derived Mesendoderm Cultured Cells;Donor=AK164;schema=BED3+9;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=NTR:0000856;is_hg38_lifted=yes system_category Embryo life_stage Embryonic track_name ROADMAP Mesendoderm ChIP-seq H3K4me2-histone-mark peaks (broadPeak-lifted) [Life stage: Embryonic] [Histone ChIP-seq peaks]
H3K4me2 • Muscle satellite cultured cell NGRMPQUTNBTACG • ROADMAP25693563 ChIP-seq Muscle satellite cultured cell Histone Show metadata Download track Track metadata identifier NGRMPQUTNBTACG data_source ROADMAP Download track Download number_of_intervals 67,431 bp_covered 143,432,057 output_type peaks genome_build hg38 cell_type Muscle satellite cultured cell biosample_type Primary culture biosample_term_id CL:0000594 tissue_category Skeletal Muscle encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me2 assay ChIP-seq file_format bed gappedPeak-lifted file_size 3,584,373 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/28/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.Muscle_Satellite_Cultured_Cells.H3K4me2.hSKM-3.gappedPeak.lifted.bed.gz processed_file_md5 0008d9efe9b830a5fe2e1bf277638fff wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.Muscle_Satellite_Cultured_Cells.H3K4me2.hSKM-3.gappedPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/BI.Muscle_Satellite_Cultured_Cells.H3K4me2.hSKM-3.gappedPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/gappedPeak/BI.Muscle_Satellite_Cultured_Cells.H3K4me2.hSKM-3.gappedPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/gappedpeak/BI.Muscle_Satellite_Cultured_Cells.H3K4me2.hSKM-3.gappedPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/gappedpeak/ raw_file_md5 fd2c1e6790dabc22f4ba3b6b762e4e95 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me2 peaks track_description version=2015;Original_cell_type=Muscle Satellite Cultured Cells;Donor=hSKM-3;schema=BED3+15;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Muscular life_stage Unknown track_name ROADMAP Muscle satellite cultured cell ChIP-seq H3K4me2-histone-mark peaks (gappedPeak-lifted) [Histone ChIP-seq peaks]
H3K4me2 • H9 NGRMPRDNMWOBRM • ROADMAP25693563 ChIP-seq H9 Histone Show metadata Download track Track metadata identifier NGRMPRDNMWOBRM data_source ROADMAP Download track Download number_of_intervals 96,358 bp_covered 28,373,529 output_type peaks genome_build hg38 cell_type H9 biosample_type Stem cell biosample_term_id EFO:0003045 tissue_category Embryo encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me2 assay ChIP-seq file_format bed narrowPeak-lifted file_size 3,081,272 downloaded_date 08/15/2018 release_date 11/30/2014 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/UCSD.H9.H3K4me2.SK198.narrowPeak.lifted.bed.gz processed_file_md5 fd1260260ff024c8c39acd34c5507a27 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/UCSD.H9.H3K4me2.SK198.narrowPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/UCSD.H9.H3K4me2.SK198.narrowPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/narrowPeak/UCSD.H9.H3K4me2.SK198.narrowPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/narrowpeak/UCSD.H9.H3K4me2.SK198.narrowPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/narrowpeak/ raw_file_md5 ca16c850f0028b387418401838b904c5 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me2 peaks track_description version=2015;Original_cell_type=H9;Donor=SK198;schema=BED3+10;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=EFO:0003045;is_hg38_lifted=yes system_category Embryo life_stage Embryonic track_name ROADMAP H9 ChIP-seq H3K4me2-histone-mark peaks (narrowPeak-lifted) [Life stage: Embryonic] [Histone ChIP-seq peaks]
H3K4me2 • Neuronal progenitor cell NGRMPRFXISHKDI • ROADMAP25693563 ChIP-seq Neuronal progenitor cell Histone Show metadata Download track Track metadata identifier NGRMPRFXISHKDI data_source ROADMAP Download track Download number_of_intervals 1,078,365 bp_covered 598,565,368 output_type peaks genome_build hg38 cell_type Neuronal progenitor cell biosample_type In vitro differentiated cells biosample_term_id CL:0000047 tissue_category Stem Cell encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me2 assay ChIP-seq file_format bed broadPeak-lifted file_size 33,221,897 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/27/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H3K4me2.AK260.broadPeak.lifted.bed.gz processed_file_md5 60726d27c98a2e6e1889946eb1d6f301 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H3K4me2.AK260.broadPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H3K4me2.AK260.broadPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/broadPeak/UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H3K4me2.AK260.broadPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/broadpeak/UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H3K4me2.AK260.broadPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/broadpeak/ raw_file_md5 784becd3f6ed4b08c99f3cae7918c529 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me2 peaks track_description version=2015;Original_cell_type=H1 Derived Neuronal Progenitor Cultured Cells;Donor=AK260;schema=BED3+9;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Stem Cell life_stage Embryonic track_name ROADMAP Neuronal progenitor cell ChIP-seq H3K4me2-histone-mark peaks (broadPeak-lifted) [Life stage: Embryonic] [Histone ChIP-seq peaks]
H3K4me2 • Muscle satellite cultured cell NGRMPRIF5C4OX3 • ROADMAP25693563 ChIP-seq Muscle satellite cultured cell Histone Show metadata Download track Track metadata identifier NGRMPRIF5C4OX3 data_source ROADMAP Download track Download number_of_intervals 120,211 bp_covered 89,922,790 output_type peaks genome_build hg38 cell_type Muscle satellite cultured cell biosample_type Primary culture biosample_term_id CL:0000594 tissue_category Skeletal Muscle encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me2 assay ChIP-seq file_format bed narrowPeak-lifted file_size 4,310,570 downloaded_date 08/15/2018 release_date 11/30/2014 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/BI.Muscle_Satellite_Cultured_Cells.H3K4me2.hSKM-2.narrowPeak.lifted.bed.gz processed_file_md5 e023461043f6db23449d73b6484a0aca wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/BI.Muscle_Satellite_Cultured_Cells.H3K4me2.hSKM-2.narrowPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/BI.Muscle_Satellite_Cultured_Cells.H3K4me2.hSKM-2.narrowPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/narrowPeak/BI.Muscle_Satellite_Cultured_Cells.H3K4me2.hSKM-2.narrowPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/narrowpeak/BI.Muscle_Satellite_Cultured_Cells.H3K4me2.hSKM-2.narrowPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/narrowpeak/ raw_file_md5 0ae2464abb1495cea834284267c8e58f data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me2 peaks track_description version=2015;Original_cell_type=Muscle Satellite Cultured Cells;Donor=hSKM-2;schema=BED3+10;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Muscular life_stage Unknown track_name ROADMAP Muscle satellite cultured cell ChIP-seq H3K4me2-histone-mark peaks (narrowPeak-lifted) [Histone ChIP-seq peaks]
H3K4me2 • Muscle satellite cultured cell NGRMPSLZKUV4WB • ROADMAP25693563 ChIP-seq Muscle satellite cultured cell Histone Show metadata Download track Track metadata identifier NGRMPSLZKUV4WB data_source ROADMAP Download track Download number_of_intervals 141,760 bp_covered 186,628,983 output_type peaks genome_build hg38 cell_type Muscle satellite cultured cell biosample_type Primary culture biosample_term_id CL:0000594 tissue_category Skeletal Muscle encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me2 assay ChIP-seq file_format bed broadPeak-lifted file_size 4,875,243 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/27/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/BI.Muscle_Satellite_Cultured_Cells.H3K4me2.hSKM-3.broadPeak.lifted.bed.gz processed_file_md5 bba60f77e9d5dce576862591002eb271 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/BI.Muscle_Satellite_Cultured_Cells.H3K4me2.hSKM-3.broadPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/BI.Muscle_Satellite_Cultured_Cells.H3K4me2.hSKM-3.broadPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/broadPeak/BI.Muscle_Satellite_Cultured_Cells.H3K4me2.hSKM-3.broadPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/broadpeak/BI.Muscle_Satellite_Cultured_Cells.H3K4me2.hSKM-3.broadPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/broadpeak/ raw_file_md5 c5570fddad80128e920c04cfaf38afba data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me2 peaks track_description version=2015;Original_cell_type=Muscle Satellite Cultured Cells;Donor=hSKM-3;schema=BED3+9;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Muscular life_stage Unknown track_name ROADMAP Muscle satellite cultured cell ChIP-seq H3K4me2-histone-mark peaks (broadPeak-lifted) [Histone ChIP-seq peaks]
H3K4me2 • Trophoblast NGRMPTVUCYBPKU • ROADMAP25693563 ChIP-seq Trophoblast Histone Show metadata Download track Track metadata identifier NGRMPTVUCYBPKU data_source ROADMAP Download track Download number_of_intervals 462,916 bp_covered 309,195,198 output_type peaks genome_build hg38 cell_type Trophoblast biosample_type In vitro differentiated cells biosample_term_id UBERON:0000088 tissue_category Embryo encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me2 assay ChIP-seq file_format bed broadPeak-lifted file_size 14,964,408 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/27/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H3K4me2.SK497.broadPeak.lifted.bed.gz processed_file_md5 b819231e0c3f77e5f8f79a8bf0618871 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H3K4me2.SK497.broadPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H3K4me2.SK497.broadPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/broadPeak/UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H3K4me2.SK497.broadPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/broadpeak/UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H3K4me2.SK497.broadPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/broadpeak/ raw_file_md5 6efb97942de55df85780787ae8aa18b0 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me2 peaks track_description version=2015;Original_cell_type=H1 BMP4 Derived Trophoblast Cultured Cells;Donor=SK497;schema=BED3+9;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=NTR:0000856;is_hg38_lifted=yes system_category Embryo life_stage Embryonic track_name ROADMAP Trophoblast ChIP-seq H3K4me2-histone-mark peaks (broadPeak-lifted) [Life stage: Embryonic] [Histone ChIP-seq peaks]
H3K4me2 • IMR-90 NGRMPUYZI5QAXL • ROADMAP25693563 ChIP-seq IMR-90 Histone Show metadata Download track Track metadata identifier NGRMPUYZI5QAXL data_source ROADMAP Download track Download number_of_intervals 84,446 bp_covered 145,931,955 output_type peaks genome_build hg38 cell_type IMR-90 biosample_type Cell line biosample_term_id EFO:0001196 tissue_category Lung encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me2 assay ChIP-seq file_format bed gappedPeak-lifted file_size 4,543,279 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/28/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.IMR90.H3K4me2.LL232.gappedPeak.lifted.bed.gz processed_file_md5 3c546afd6508d1c547f8e4f59670e834 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.IMR90.H3K4me2.LL232.gappedPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.IMR90.H3K4me2.LL232.gappedPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/gappedPeak/UCSD.IMR90.H3K4me2.LL232.gappedPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/gappedpeak/UCSD.IMR90.H3K4me2.LL232.gappedPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/gappedpeak/ raw_file_md5 6c8ddec9a047fbf105c859326e9e45d5 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me2 peaks track_description version=2015;Original_cell_type=IMR 90;Donor=LL232;schema=BED3+15;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=EFO:0001196;is_hg38_lifted=yes system_category Respiratory life_stage Unknown track_name ROADMAP IMR-90 ChIP-seq H3K4me2-histone-mark peaks (gappedPeak-lifted) [Histone ChIP-seq peaks]
H3K4me2 • Neuronal progenitor cell NGRMPVY7KTCT3R • ROADMAP25693563 ChIP-seq Neuronal progenitor cell Histone Show metadata Download track Track metadata identifier NGRMPVY7KTCT3R data_source ROADMAP Download track Download number_of_intervals 138,635 bp_covered 48,257,134 output_type peaks genome_build hg38 cell_type Neuronal progenitor cell biosample_type In vitro differentiated cells biosample_term_id CL:0000047 tissue_category Stem Cell encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me2 assay ChIP-seq file_format bed narrowPeak-lifted file_size 4,273,326 downloaded_date 08/15/2018 release_date 11/30/2014 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H3K4me2.AK260.narrowPeak.lifted.bed.gz processed_file_md5 94d35e0a7f20db10361f823e12dbbb46 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H3K4me2.AK260.narrowPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H3K4me2.AK260.narrowPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/narrowPeak/UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H3K4me2.AK260.narrowPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/narrowpeak/UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H3K4me2.AK260.narrowPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/narrowpeak/ raw_file_md5 198227cb468ed73b0356f3c996a070cc data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me2 peaks track_description version=2015;Original_cell_type=H1 Derived Neuronal Progenitor Cultured Cells;Donor=AK260;schema=BED3+10;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Stem Cell life_stage Embryonic track_name ROADMAP Neuronal progenitor cell ChIP-seq H3K4me2-histone-mark peaks (narrowPeak-lifted) [Life stage: Embryonic] [Histone ChIP-seq peaks]