H3K4me3 • Luminal progenitor cell NGCEE6HTGD3LM6 • CEEHRC27863956 ChIP-seq Luminal progenitor cell Histone Show metadata Download track Track metadata identifier NGCEE6HTGD3LM6 data_source CEEHRC Download track Download number_of_intervals 38,745 bp_covered 45,563,343 output_type peaks genome_build hg38 cell_type Luminal progenitor cell biosample_type Primary cell biosample_term_id UBERON:0000310 tissue_category Female Reproductive encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me3 assay ChIP-seq file_format bed bed3 file_size 333,329 downloaded_date 03/12/2021 release_date 11/06/2019 date_added_to_filer 01/19/2023 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/99477.CEEHRC.CEMT0155.H3K4me3.peak_calls.bed.gz processed_file_md5 b04d3d8034f6b8261f74fede3e456098 wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/99477.CEEHRC.CEMT0155.H3K4me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/99477.CEEHRC.CEMT0155.H3K4me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/99477.CEEHRC.CEMT0155.H3K4me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/99477.CEEHRC.CEMT0155.H3K4me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 eed2e780557690bb349885595b6a2e5f data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me3 peaks track_description version=build 2020-10;Original_cell_type=Luminal progenitor;ID=CEMT0155;disease=None;donor_id=14-17;donor_age=19;donor_sex=Female;sample_ontology=https://purl.obolibrary.org/obo/CL_0002326;schema=BED3;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/CEEHRC.html;original_biosample_term_id=CL_0002326;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name CEEHRC Luminal progenitor cell ChIP-seq H3K4me3-histone-mark peaks (bed3) [Life stage: Adult] [Histone ChIP-seq peaks]
H3K4me3 • B cell NGCEE6T55KMC3C • CEEHRC27863956 ChIP-seq B cell Histone Show metadata Download track Track metadata identifier NGCEE6T55KMC3C data_source CEEHRC Download track Download number_of_intervals 45,791 bp_covered 54,278,447 output_type peaks genome_build hg38 cell_type B cell biosample_type Primary cell biosample_term_id CL:0000236 tissue_category Immune encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me3 assay ChIP-seq file_format bed bed3 file_size 384,687 downloaded_date 03/12/2021 release_date 10/12/2018 date_added_to_filer 01/19/2023 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/98257.CEEHRC.CEMT0129.H3K4me3.peak_calls.bed.gz processed_file_md5 1d1352b7ba0ec7010ac0bbca100ab2ad wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/98257.CEEHRC.CEMT0129.H3K4me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/98257.CEEHRC.CEMT0129.H3K4me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/98257.CEEHRC.CEMT0129.H3K4me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/98257.CEEHRC.CEMT0129.H3K4me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 da1d48d72d001d22076d9a96c6750921 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me3 peaks track_description version=build 2020-10;Original_cell_type=B cells;ID=CEMT0129;disease=None;donor_id=JLK_V2;donor_age=3;donor_sex=Male;sample_ontology=https://purl.obolibrary.org/obo/CL_0000236;schema=BED3;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/CEEHRC.html;original_biosample_term_id=CL_0000236;is_hg38_lifted=no system_category Lymphatic life_stage Child track_name CEEHRC B cell ChIP-seq H3K4me3-histone-mark peaks (bed3) [Life stage: Child] [Histone ChIP-seq peaks]
H3K4me3 • T-cell NGCEE6WDQBQESM • CEEHRC27863956 ChIP-seq T-cell Histone Show metadata Download track Track metadata identifier NGCEE6WDQBQESM data_source CEEHRC Download track Download number_of_intervals 49,978 bp_covered 32,016,236 output_type peaks genome_build hg38 cell_type T-cell biosample_type Primary cell biosample_term_id CL:0000084 tissue_category Immune encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me3 assay ChIP-seq file_format bed bed5 file_size 629,041 downloaded_date 03/12/2021 release_date 10/19/2020 date_added_to_filer 03/06/2025 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/83525.CEEHRC.MS012707.H3K4me3.peak_calls.bed.gz processed_file_md5 d1fe60235ffd433b71f3af02425d4b40 wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/83525.CEEHRC.MS012707.H3K4me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/83525.CEEHRC.MS012707.H3K4me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/83525.CEEHRC.MS012707.H3K4me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/83525.CEEHRC.MS012707.H3K4me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 99f6be5e5fb8b2569de9a2cd6d169c7a data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me3 peaks track_description version=build 2020-10;Original_cell_type=T cell;ID=MS012707;disease=Healthy;donor_id=McGill0127;donor_age=33-38;donor_sex=Male;sample_ontology=https://purl.obolibrary.org/obo/CL_0000084;schema=BED5;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/CEEHRC.html;original_biosample_term_id=CL_0000084;is_hg38_lifted=no system_category Lymphatic life_stage Adult track_name CEEHRC T-cell ChIP-seq H3K4me3-histone-mark peaks (bed5) [Life stage: Adult] [Histone ChIP-seq peaks]
H3K4me3 • B cell NGCEE6X75UVKKN • CEEHRC27863956 ChIP-seq B cell Histone Show metadata Download track Track metadata identifier NGCEE6X75UVKKN data_source CEEHRC Download track Download number_of_intervals 42,888 bp_covered 24,419,855 output_type peaks genome_build hg38 cell_type B cell biosample_type Primary cell biosample_term_id CL:0000236 tissue_category Immune encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me3 assay ChIP-seq file_format bed bed5 file_size 538,389 downloaded_date 03/12/2021 release_date 10/19/2020 date_added_to_filer 03/06/2025 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/83420.CEEHRC.MS010302.H3K4me3.peak_calls.bed.gz processed_file_md5 d4e90afc0607fbf71158597cb7b949b2 wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/83420.CEEHRC.MS010302.H3K4me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/83420.CEEHRC.MS010302.H3K4me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/83420.CEEHRC.MS010302.H3K4me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/83420.CEEHRC.MS010302.H3K4me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 b231cd46ebf2e1ac949b35cda70f6113 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me3 peaks track_description version=build 2020-10;Original_cell_type=B cell;ID=MS010302;disease=Healthy;donor_id=McGill0103;donor_age=44-49;donor_sex=Male;sample_ontology=https://purl.obolibrary.org/obo/CL_0000236;schema=BED5;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/CEEHRC.html;original_biosample_term_id=CL_0000236;is_hg38_lifted=no system_category Lymphatic life_stage Adult track_name CEEHRC B cell ChIP-seq H3K4me3-histone-mark peaks (bed5) [Life stage: Adult] [Histone ChIP-seq peaks]
H3K4me3 • CD4+ NGCEE76Y5AKC7P • CEEHRC27863956 ChIP-seq CD4+ Histone Show metadata Download track Track metadata identifier NGCEE76Y5AKC7P data_source CEEHRC Download track Download number_of_intervals 34,337 bp_covered 29,977,288 output_type peaks genome_build hg38 cell_type CD4+ biosample_type Primary cell biosample_term_id CL:0000492 tissue_category Blood encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me3 assay ChIP-seq file_format bed bed5 file_size 450,752 downloaded_date 03/12/2021 release_date 10/19/2020 date_added_to_filer 03/06/2025 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/82947.CEEHRC.MS001101.H3K4me3.peak_calls.bed.gz processed_file_md5 c71f417bbb1009376c1663984b8c31b2 wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/82947.CEEHRC.MS001101.H3K4me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/82947.CEEHRC.MS001101.H3K4me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/82947.CEEHRC.MS001101.H3K4me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/82947.CEEHRC.MS001101.H3K4me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 6a1dbf9d1790b87ba42070dbc72888b2 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me3 peaks track_description version=build 2020-10;Original_cell_type=CD4-positive helper T cell;ID=MS001101;disease=Healthy;donor_id=McGill0011;donor_age=23-28;donor_sex=Female;sample_ontology=https://purl.obolibrary.org/obo/CL_0000492;schema=BED5;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/CEEHRC.html;original_biosample_term_id=CL_0000492;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name CEEHRC CD4+ ChIP-seq H3K4me3-histone-mark peaks (bed5) [Life stage: Adult] [Histone ChIP-seq peaks]
H3K4me3 • Monocyte NGCEE7OLQUKAWV • CEEHRC27863956 ChIP-seq Monocyte Histone Show metadata Download track Track metadata identifier NGCEE7OLQUKAWV data_source CEEHRC Download track Download number_of_intervals 2,330 bp_covered 542,866 output_type peaks genome_build hg38 cell_type Monocyte biosample_type Primary cell biosample_term_id CL:0000576 tissue_category Blood encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me3 assay ChIP-seq file_format bed bed5 file_size 30,845 downloaded_date 03/12/2021 release_date 10/19/2020 date_added_to_filer 03/06/2025 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/83664.CEEHRC.MS018002.H3K4me3.peak_calls.bed.gz processed_file_md5 a722676ffc9d7ac8ff2f172581c7cbf5 wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/83664.CEEHRC.MS018002.H3K4me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/83664.CEEHRC.MS018002.H3K4me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/83664.CEEHRC.MS018002.H3K4me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/83664.CEEHRC.MS018002.H3K4me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 a85e7c9e4b341d28c9cea3701e09e158 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me3 peaks track_description version=build 2020-10;Original_cell_type=Monocyte;ID=MS018002;disease=Scleroderma;donor_id=McGill0180;donor_age=60;donor_sex=Female;sample_ontology=https://purl.obolibrary.org/obo/CL_0000576;schema=BED5;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/CEEHRC.html;original_biosample_term_id=CL_0000576;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name CEEHRC Monocyte ChIP-seq H3K4me3-histone-mark peaks (bed5) [Life stage: Adult] [Histone ChIP-seq peaks]
H3K4me3 • Large intestine NGCEEA455BTQ4Z • CEEHRC27863956 ChIP-seq Large intestine Histone Show metadata Download track Track metadata identifier NGCEEA455BTQ4Z data_source CEEHRC Download track Download number_of_intervals 26,270 bp_covered 35,840,261 output_type peaks genome_build hg38 cell_type Large intestine biosample_type Primary tissue biosample_term_id UBERON:0000059 tissue_category Digestive encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me3 assay ChIP-seq file_format bed bed3 file_size 229,195 downloaded_date 03/12/2021 release_date 10/11/2018 date_added_to_filer 01/19/2023 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/97560.CEEHRC.CEMT0054.H3K4me3.peak_calls.bed.gz processed_file_md5 b73b1bc5b2b48f3d2ca9db21bfca780e wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/97560.CEEHRC.CEMT0054.H3K4me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/97560.CEEHRC.CEMT0054.H3K4me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/97560.CEEHRC.CEMT0054.H3K4me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/97560.CEEHRC.CEMT0054.H3K4me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 ab25c1306c84285287409d2c6a02e3a5 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me3 peaks track_description version=build 2020-10;Original_cell_type=Large Intestine-Colon;ID=CEMT0054;disease=None;donor_id=AKCC58;donor_age=90+;donor_sex=Female;sample_ontology=https://purl.obolibrary.org/obo/UBERON_0001156;schema=BED3;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/CEEHRC.html;original_biosample_term_id=UBERON_0001156;is_hg38_lifted=no system_category Digestive life_stage Adult track_name CEEHRC Large intestine ChIP-seq H3K4me3-histone-mark peaks (bed3) [Life stage: Adult] [Histone ChIP-seq peaks]
H3K4me3 • Stromal cell NGCEEAB7DSP23Z • CEEHRC27863956 ChIP-seq Stromal cell Histone Show metadata Download track Track metadata identifier NGCEEAB7DSP23Z data_source CEEHRC Download track Download number_of_intervals 40,049 bp_covered 55,496,858 output_type peaks genome_build hg38 cell_type Stromal cell biosample_type Primary cell biosample_term_id CL:0000499 tissue_category Connective Tissue encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me3 assay ChIP-seq file_format bed bed3 file_size 346,964 downloaded_date 03/12/2021 release_date 10/31/2019 date_added_to_filer 01/19/2023 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/99400.CEEHRC.CEMT0201.H3K4me3.peak_calls.bed.gz processed_file_md5 8dca58c3fe3d7241b80e891c0a7e68c3 wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/99400.CEEHRC.CEMT0201.H3K4me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/99400.CEEHRC.CEMT0201.H3K4me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/99400.CEEHRC.CEMT0201.H3K4me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/99400.CEEHRC.CEMT0201.H3K4me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 e4b1391a7e71667c7ee37582acbf6400 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me3 peaks track_description version=build 2020-10;Original_cell_type=Stromal cells;ID=CEMT0201;disease=None;donor_id=15-18;donor_age=48;donor_sex=Female;sample_ontology=https://purl.obolibrary.org/obo/CL_0002555;schema=BED3;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/CEEHRC.html;original_biosample_term_id=CL_0002555;is_hg38_lifted=no system_category Skeletal life_stage Fetal track_name CEEHRC Stromal cell ChIP-seq H3K4me3-histone-mark peaks (bed3) [Life stage: Fetal] [Histone ChIP-seq peaks]
H3K4me3 • Large intestine NGCEEAFTSGIAFB • CEEHRC27863956 ChIP-seq Large intestine Histone Show metadata Download track Track metadata identifier NGCEEAFTSGIAFB data_source CEEHRC Download track Download number_of_intervals 22,043 bp_covered 35,662,493 output_type peaks genome_build hg38 cell_type Large intestine biosample_type Primary tissue biosample_term_id UBERON:0000059 tissue_category Digestive encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me3 assay ChIP-seq file_format bed bed3 file_size 191,389 downloaded_date 03/12/2021 release_date 10/11/2018 date_added_to_filer 01/19/2023 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/97752.CEEHRC.CEMT0065.H3K4me3.peak_calls.bed.gz processed_file_md5 3e60d83e0cb8ebd69ac19ac9971ad985 wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/97752.CEEHRC.CEMT0065.H3K4me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/97752.CEEHRC.CEMT0065.H3K4me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/97752.CEEHRC.CEMT0065.H3K4me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/97752.CEEHRC.CEMT0065.H3K4me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 2590b98bfb6c561cca2325dc324bcda5 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me3 peaks track_description version=build 2020-10;Original_cell_type=Large Intestine-Colon-Ascending (Right);ID=CEMT0065;disease=Large Intestine-Colon Carcinoma;donor_id=AKCC63;donor_age=84;donor_sex=Female;sample_ontology=https://purl.obolibrary.org/obo/UBERON_0001156;schema=BED3;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/CEEHRC.html;original_biosample_term_id=UBERON_0001156;is_hg38_lifted=no system_category Digestive life_stage Adult track_name CEEHRC Large intestine ChIP-seq H3K4me3-histone-mark peaks (bed3) [Life stage: Adult] [Histone ChIP-seq peaks]
H3K4me3 • Skeletal muscle tissue NGCEEAJDETOW7F • CEEHRC27863956 ChIP-seq Skeletal muscle tissue Histone Show metadata Download track Track metadata identifier NGCEEAJDETOW7F data_source CEEHRC Download track Download number_of_intervals 67,257 bp_covered 60,928,665 output_type peaks genome_build hg38 cell_type Skeletal muscle tissue biosample_type Primary tissue biosample_term_id UBERON:0001134 tissue_category Skeletal Muscle encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me3 assay ChIP-seq file_format bed bed5 file_size 867,421 downloaded_date 03/12/2021 release_date 10/19/2020 date_added_to_filer 03/06/2025 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/82963.CEEHRC.MS001201.H3K4me3.peak_calls.bed.gz processed_file_md5 39b029b6bb52507e95c4e87fdb6e20ef wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/82963.CEEHRC.MS001201.H3K4me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/82963.CEEHRC.MS001201.H3K4me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/82963.CEEHRC.MS001201.H3K4me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/82963.CEEHRC.MS001201.H3K4me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 c91b8d271de73aac0ee50d5c1388d647 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me3 peaks track_description version=build 2020-10;Original_cell_type=Skeletal muscle tissue;ID=MS001201;disease=Leigh Disease;donor_id=McGill0012;donor_age=NA;donor_sex=Female;sample_ontology=https://purl.obolibrary.org/obo/UBERON_0001134;schema=BED5;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/CEEHRC.html;original_biosample_term_id=UBERON_0001134;is_hg38_lifted=no system_category Muscular life_stage Adult track_name CEEHRC Skeletal muscle tissue ChIP-seq H3K4me3-histone-mark peaks (bed5) [Life stage: Adult] [Histone ChIP-seq peaks]
H3K4me3 • Skeletal muscle tissue NGCEEALDVHGNKC • CEEHRC27863956 ChIP-seq Skeletal muscle tissue Histone Show metadata Download track Track metadata identifier NGCEEALDVHGNKC data_source CEEHRC Download track Download number_of_intervals 56,397 bp_covered 48,470,215 output_type peaks genome_build hg38 cell_type Skeletal muscle tissue biosample_type Primary tissue biosample_term_id UBERON:0001134 tissue_category Skeletal Muscle encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me3 assay ChIP-seq file_format bed bed5 file_size 735,506 downloaded_date 03/12/2021 release_date 10/19/2020 date_added_to_filer 03/06/2025 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/83268.CEEHRC.MS004401.H3K4me3.peak_calls.bed.gz processed_file_md5 bf65ba227c1f342ad34924bfab6be79a wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/83268.CEEHRC.MS004401.H3K4me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/83268.CEEHRC.MS004401.H3K4me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/83268.CEEHRC.MS004401.H3K4me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/83268.CEEHRC.MS004401.H3K4me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 9d8a65f73dae2c505bcf8ffea169a920 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me3 peaks track_description version=build 2020-10;Original_cell_type=Skeletal muscle tissue;ID=MS004401;disease=Unknown;donor_id=McGill0044;donor_age=NA;donor_sex=Male;sample_ontology=https://purl.obolibrary.org/obo/UBERON_0001134;schema=BED5;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/CEEHRC.html;original_biosample_term_id=UBERON_0001134;is_hg38_lifted=no system_category Muscular life_stage Adult track_name CEEHRC Skeletal muscle tissue ChIP-seq H3K4me3-histone-mark peaks (bed5) [Life stage: Adult] [Histone ChIP-seq peaks]
H3K4me3 • Large intestine NGCEEARXLXALL5 • CEEHRC27863956 ChIP-seq Large intestine Histone Show metadata Download track Track metadata identifier NGCEEARXLXALL5 data_source CEEHRC Download track Download number_of_intervals 21,628 bp_covered 33,405,937 output_type peaks genome_build hg38 cell_type Large intestine biosample_type Primary tissue biosample_term_id UBERON:0000059 tissue_category Digestive encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me3 assay ChIP-seq file_format bed bed3 file_size 190,886 downloaded_date 03/12/2021 release_date 10/11/2018 date_added_to_filer 01/19/2023 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/97598.CEEHRC.CEMT0056.H3K4me3.peak_calls.bed.gz processed_file_md5 7268c517abbf19617c61527aa638d30b wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/97598.CEEHRC.CEMT0056.H3K4me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/97598.CEEHRC.CEMT0056.H3K4me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/97598.CEEHRC.CEMT0056.H3K4me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/97598.CEEHRC.CEMT0056.H3K4me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 f0938bfb4edac6189126b7b354bf1755 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me3 peaks track_description version=build 2020-10;Original_cell_type=Large Intestine-Colon;ID=CEMT0056;disease=None;donor_id=AKCC63;donor_age=84;donor_sex=Female;sample_ontology=https://purl.obolibrary.org/obo/UBERON_0001156;schema=BED3;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/CEEHRC.html;original_biosample_term_id=UBERON_0001156;is_hg38_lifted=no system_category Digestive life_stage Adult track_name CEEHRC Large intestine ChIP-seq H3K4me3-histone-mark peaks (bed3) [Life stage: Adult] [Histone ChIP-seq peaks]
H3K4me3 • MCF10A NGCEEAS7IITGEK • CEEHRC27863956 ChIP-seq MCF10A Histone Show metadata Download track Track metadata identifier NGCEEAS7IITGEK data_source CEEHRC Download track Download number_of_intervals 26,486 bp_covered 28,192,811 output_type peaks genome_build hg38 cell_type MCF10A biosample_type Cell line biosample_term_id EFO:0001200 tissue_category Breast encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me3 assay ChIP-seq file_format bed bed3 file_size 216,895 downloaded_date 03/12/2021 release_date 10/11/2018 date_added_to_filer 01/19/2023 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/96750.CEEHRC.CEMT0007.H3K4me3.peak_calls.bed.gz processed_file_md5 76c425fdef3f04cc2a2ce7a8f3ea0bc2 wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/96750.CEEHRC.CEMT0007.H3K4me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/96750.CEEHRC.CEMT0007.H3K4me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/96750.CEEHRC.CEMT0007.H3K4me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/96750.CEEHRC.CEMT0007.H3K4me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 d6e8abb64432182ceb7aed4d9739d769 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me3 peaks track_description version=build 2020-10;Original_cell_type=MCF10A;ID=CEMT0007;disease=Mammary gland-Breast Fibrocystic Disease;donor_id=NA;donor_age=NA;donor_sex=NA;sample_ontology=https://www.ebi.ac.uk/efo/EFO_0001200;schema=BED3;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/CEEHRC.html;original_biosample_term_id=EFO_0001200;is_hg38_lifted=no system_category Reproductive life_stage Unknown track_name CEEHRC MCF10A ChIP-seq H3K4me3-histone-mark peaks (bed3) [Histone ChIP-seq peaks]
H3K4me3 • Kidney NGCEEAUCYCQ63M • CEEHRC27863956 ChIP-seq Kidney Histone Show metadata Download track Track metadata identifier NGCEEAUCYCQ63M data_source CEEHRC Download track Download number_of_intervals 51,232 bp_covered 45,425,369 output_type peaks genome_build hg38 cell_type Kidney biosample_type Primary tissue biosample_term_id UBERON:0002113 tissue_category Urinary encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me3 assay ChIP-seq file_format bed bed5 file_size 684,733 downloaded_date 03/12/2021 release_date 10/19/2020 date_added_to_filer 03/06/2025 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/84220.CEEHRC.MS040102.H3K4me3.peak_calls.bed.gz processed_file_md5 00679487c3ff4e7f73d4eb958b394656 wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/84220.CEEHRC.MS040102.H3K4me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/84220.CEEHRC.MS040102.H3K4me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/84220.CEEHRC.MS040102.H3K4me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/84220.CEEHRC.MS040102.H3K4me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 9799b8141fdae33c25486c36065e7d0b data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me3 peaks track_description version=build 2020-10;Original_cell_type=Kidney;ID=MS040102;disease=Normal;donor_id=McGill0401;donor_age=50;donor_sex=Male;sample_ontology=https://purl.obolibrary.org/obo/UBERON_0002113;schema=BED5;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/CEEHRC.html;original_biosample_term_id=UBERON_0002113;is_hg38_lifted=no system_category Renal life_stage Adult track_name CEEHRC Kidney ChIP-seq H3K4me3-histone-mark peaks (bed5) [Life stage: Adult] [Histone ChIP-seq peaks]
H3K4me3 • Frontal lobe NGCEEB7TJHQOBR • CEEHRC27863956 ChIP-seq Frontal lobe Histone Show metadata Download track Track metadata identifier NGCEEB7TJHQOBR data_source CEEHRC Download track Download number_of_intervals 27,801 bp_covered 35,110,788 output_type peaks genome_build hg38 cell_type Frontal lobe biosample_type Primary tissue biosample_term_id UBERON:0016525 tissue_category Brain encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me3 assay ChIP-seq file_format bed bed3 file_size 240,792 downloaded_date 03/12/2021 release_date 10/11/2018 date_added_to_filer 01/19/2023 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/97391.CEEHRC.CEMT0047.H3K4me3.peak_calls.bed.gz processed_file_md5 e8b53a7a7e744a38ebb6470de2a21ff3 wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/97391.CEEHRC.CEMT0047.H3K4me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/97391.CEEHRC.CEMT0047.H3K4me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/97391.CEEHRC.CEMT0047.H3K4me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/97391.CEEHRC.CEMT0047.H3K4me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 3da9c9f3dd4c278b9d4488363a74c7e6 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me3 peaks track_description version=build 2020-10;Original_cell_type=Brain-Frontal Lobe-Right;ID=CEMT0047;disease=Brain Oligodendroglioma-Anaplastic;donor_id=VNA96;donor_age=43;donor_sex=Male;sample_ontology=https://purl.obolibrary.org/obo/CL_0000128;schema=BED3;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/CEEHRC.html;original_biosample_term_id=CL_0000128;is_hg38_lifted=no system_category Nervous life_stage Adult track_name CEEHRC Frontal lobe ChIP-seq H3K4me3-histone-mark peaks (bed3) [Life stage: Adult] [Histone ChIP-seq peaks]
H3K4me3 • Amygdala NGCEEBD22LWCH4 • CEEHRC27863956 ChIP-seq Amygdala Histone Show metadata Download track Track metadata identifier NGCEEBD22LWCH4 data_source CEEHRC Download track Download number_of_intervals 42,473 bp_covered 46,880,856 output_type peaks genome_build hg38 cell_type Amygdala biosample_type Primary tissue biosample_term_id UBERON:0001876 tissue_category Brain encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me3 assay ChIP-seq file_format bed bed5 file_size 581,263 downloaded_date 03/12/2021 release_date 10/19/2020 date_added_to_filer 03/06/2025 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/84523.CEEHRC.MS047601.H3K4me3.peak_calls.bed.gz processed_file_md5 daa8fe1685b83a5865901ba51811f8d3 wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/84523.CEEHRC.MS047601.H3K4me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/84523.CEEHRC.MS047601.H3K4me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/84523.CEEHRC.MS047601.H3K4me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/84523.CEEHRC.MS047601.H3K4me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 bb228e755848b9c99892ad1897090e17 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me3 peaks track_description version=build 2020-10;Original_cell_type=Amygdala;ID=MS047601;disease=Unknown;donor_id=McGill0476;donor_age=NA;donor_sex=Unknown;sample_ontology=https://purl.obolibrary.org/obo/UBERON_0001876;schema=BED5;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/CEEHRC.html;original_biosample_term_id=UBERON_0001876;is_hg38_lifted=no system_category Nervous life_stage Unknown track_name CEEHRC Amygdala ChIP-seq H3K4me3-histone-mark peaks (bed5) [Histone ChIP-seq peaks]
H3K4me3 • Brain NGCEEBI3PJ2E75 • CEEHRC27863956 ChIP-seq Brain Histone Show metadata Download track Track metadata identifier NGCEEBI3PJ2E75 data_source CEEHRC Download track Download number_of_intervals 24,466 bp_covered 29,355,658 output_type peaks genome_build hg38 cell_type Brain biosample_type Primary tissue biosample_term_id UBERON:0000955 tissue_category Brain encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me3 assay ChIP-seq file_format bed bed3 file_size 211,718 downloaded_date 03/12/2021 release_date 10/11/2018 date_added_to_filer 01/19/2023 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/96814.CEEHRC.CEMT0022.H3K4me3.peak_calls.bed.gz processed_file_md5 27699668ab0d009889a473cc67ab6d22 wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/96814.CEEHRC.CEMT0022.H3K4me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/96814.CEEHRC.CEMT0022.H3K4me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/96814.CEEHRC.CEMT0022.H3K4me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/96814.CEEHRC.CEMT0022.H3K4me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 d4c4c86c2b2421ca9907c2ec5d8bea5a data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me3 peaks track_description version=build 2020-10;Original_cell_type=Brain;ID=CEMT0022;disease=Brain Oligodendroglioma-Anaplastic;donor_id=SM2515;donor_age=NA;donor_sex=Male;sample_ontology=https://purl.obolibrary.org/obo/UBERON_0000955;schema=BED3;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/CEEHRC.html;original_biosample_term_id=UBERON_0000955;is_hg38_lifted=no system_category Nervous life_stage Adult track_name CEEHRC Brain ChIP-seq H3K4me3-histone-mark peaks (bed3) [Life stage: Adult] [Histone ChIP-seq peaks]
H3K4me3 • Thyroid NGCEEBSE5BYCWO • CEEHRC27863956 ChIP-seq Thyroid Histone Show metadata Download track Track metadata identifier NGCEEBSE5BYCWO data_source CEEHRC Download track Download number_of_intervals 24,883 bp_covered 32,242,211 output_type peaks genome_build hg38 cell_type Thyroid biosample_type Primary tissue biosample_term_id UBERON:0002046 tissue_category Endocrine encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me3 assay ChIP-seq file_format bed bed3 file_size 216,998 downloaded_date 03/12/2021 release_date 10/11/2018 date_added_to_filer 01/19/2023 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/97003.CEEHRC.CEMT0044.H3K4me3.peak_calls.bed.gz processed_file_md5 59917a1e180559e346e795d6d5f38da7 wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/97003.CEEHRC.CEMT0044.H3K4me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/97003.CEEHRC.CEMT0044.H3K4me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/97003.CEEHRC.CEMT0044.H3K4me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/97003.CEEHRC.CEMT0044.H3K4me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 74d972c7e533983b4f51aa91d180c667 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me3 peaks track_description version=build 2020-10;Original_cell_type=Thyroid;ID=CEMT0044;disease=None;donor_id=SW-TTP-177;donor_age=55;donor_sex=Male;sample_ontology=https://purl.obolibrary.org/obo/UBERON_0002046;schema=BED3;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/CEEHRC.html;original_biosample_term_id=UBERON_0002046;is_hg38_lifted=no system_category Endocrine life_stage Adult track_name CEEHRC Thyroid ChIP-seq H3K4me3-histone-mark peaks (bed3) [Life stage: Adult] [Histone ChIP-seq peaks]
H3K4me3 • CD19+ B cell NGCEEBTKRLLO3L • CEEHRC27863956 ChIP-seq CD19+ B cell Histone Show metadata Download track Track metadata identifier NGCEEBTKRLLO3L data_source CEEHRC Download track Download number_of_intervals 22,279 bp_covered 26,399,986 output_type peaks genome_build hg38 cell_type CD19+ B cell biosample_type Primary cell biosample_term_id CL:0001201 tissue_category Blood encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me3 assay ChIP-seq file_format bed bed3 file_size 193,642 downloaded_date 03/12/2021 release_date 10/11/2018 date_added_to_filer 01/19/2023 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/97098.CEEHRC.CEMT0028.H3K4me3.peak_calls.bed.gz processed_file_md5 d266abd914edd0bc50034cfa1ab41c30 wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/97098.CEEHRC.CEMT0028.H3K4me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/97098.CEEHRC.CEMT0028.H3K4me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/97098.CEEHRC.CEMT0028.H3K4me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/97098.CEEHRC.CEMT0028.H3K4me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 d8f6294262ad633b521919292d4649ff data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me3 peaks track_description version=build 2020-10;Original_cell_type=CD19+ cells (B lymphocytes);ID=CEMT0028;disease=Blood-Peripheral Leukemia-Chronic lymphocytic leukemia;donor_id=237-06;donor_age=79;donor_sex=Female;sample_ontology=https://purl.obolibrary.org/obo/CL_0000236;schema=BED3;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/CEEHRC.html;original_biosample_term_id=CL_0000236;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name CEEHRC CD19+ B cell ChIP-seq H3K4me3-histone-mark peaks (bed3) [Life stage: Adult] [Histone ChIP-seq peaks]
H3K4me3 • Kidney NGCEEC2L4ESMED • CEEHRC27863956 ChIP-seq Kidney Histone Show metadata Download track Track metadata identifier NGCEEC2L4ESMED data_source CEEHRC Download track Download number_of_intervals 7,490 bp_covered 2,504,863 output_type peaks genome_build hg38 cell_type Kidney biosample_type Primary tissue biosample_term_id UBERON:0002113 tissue_category Urinary encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me3 assay ChIP-seq file_format bed bed5 file_size 97,375 downloaded_date 03/12/2021 release_date 10/19/2020 date_added_to_filer 03/06/2025 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/84289.CEEHRC.MS040302.H3K4me3.peak_calls.bed.gz processed_file_md5 4c8183a418bde88376f91f5570598fa4 wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/84289.CEEHRC.MS040302.H3K4me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/84289.CEEHRC.MS040302.H3K4me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/84289.CEEHRC.MS040302.H3K4me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/84289.CEEHRC.MS040302.H3K4me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 93a41102d48f0fe3010a2fbac5d15d90 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me3 peaks track_description version=build 2020-10;Original_cell_type=Kidney;ID=MS040302;disease=Renal Cancer;donor_id=McGill0403;donor_age=78;donor_sex=Male;sample_ontology=https://purl.obolibrary.org/obo/UBERON_0002113;schema=BED5;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/CEEHRC.html;original_biosample_term_id=UBERON_0002113;is_hg38_lifted=no system_category Renal life_stage Adult track_name CEEHRC Kidney ChIP-seq H3K4me3-histone-mark peaks (bed5) [Life stage: Adult] [Histone ChIP-seq peaks]