H3K4me3 • Thyroid NGCEEJG3TAMJKO • CEEHRC27863956 ChIP-seq Thyroid Histone Show metadata Download track Track metadata identifier NGCEEJG3TAMJKO data_source CEEHRC Download track Download number_of_intervals 23,738 bp_covered 30,252,446 output_type peaks genome_build hg38 cell_type Thyroid biosample_type Primary tissue biosample_term_id UBERON:0002046 tissue_category Endocrine encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me3 assay ChIP-seq file_format bed bed3 file_size 207,300 downloaded_date 03/12/2021 release_date 10/11/2018 date_added_to_filer 01/19/2023 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/97022.CEEHRC.CEMT0045.H3K4me3.peak_calls.bed.gz processed_file_md5 85b6d5086246edfa7ef17321a8fad07b wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/97022.CEEHRC.CEMT0045.H3K4me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/97022.CEEHRC.CEMT0045.H3K4me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/97022.CEEHRC.CEMT0045.H3K4me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/97022.CEEHRC.CEMT0045.H3K4me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 4b7b90a32cb58332e692569ff1997e43 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me3 peaks track_description version=build 2020-10;Original_cell_type=Thyroid;ID=CEMT0045;disease=Thyroid Goiter;donor_id=SW-TTP-177;donor_age=55;donor_sex=Male;sample_ontology=NCI - cancer ontology : C0018021 , NCI - anatomic site ontology : C12400 , Ontobee : UBERON_0002046;schema=BED3;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/CEEHRC.html;original_biosample_term_id=UBERON_0002046;is_hg38_lifted=no system_category Endocrine life_stage Adult track_name CEEHRC Thyroid ChIP-seq H3K4me3-histone-mark peaks (bed3) [Life stage: Adult] [Histone ChIP-seq peaks]
H3K4me3 • B cell NGCEEJGCPTZQGB • CEEHRC27863956 ChIP-seq B cell Histone Show metadata Download track Track metadata identifier NGCEEJGCPTZQGB data_source CEEHRC Download track Download number_of_intervals 35,763 bp_covered 52,023,653 output_type peaks genome_build hg38 cell_type B cell biosample_type Primary cell biosample_term_id CL:0000236 tissue_category Immune encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me3 assay ChIP-seq file_format bed bed3 file_size 295,769 downloaded_date 03/12/2021 release_date 10/12/2018 date_added_to_filer 01/19/2023 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/98432.CEEHRC.CEMT0138.H3K4me3.peak_calls.bed.gz processed_file_md5 c8a71c226090a6e2d9e6df4747f6883a wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/98432.CEEHRC.CEMT0138.H3K4me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/98432.CEEHRC.CEMT0138.H3K4me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/98432.CEEHRC.CEMT0138.H3K4me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/98432.CEEHRC.CEMT0138.H3K4me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 b09bf85e21e25fc9359556f4f9dff943 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me3 peaks track_description version=build 2020-10;Original_cell_type=B cells;ID=CEMT0138;disease=None;donor_id=JLK_V8;donor_age=7;donor_sex=Male;sample_ontology=https://purl.obolibrary.org/obo/CL_2000006;schema=BED3;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/CEEHRC.html;original_biosample_term_id=CL_2000006;is_hg38_lifted=no system_category Lymphatic life_stage Child track_name CEEHRC B cell ChIP-seq H3K4me3-histone-mark peaks (bed3) [Life stage: Child] [Histone ChIP-seq peaks]
H3K4me3 • Luminal epithelial cell NGCEEJIA4Q24QB • CEEHRC27863956 ChIP-seq Luminal epithelial cell Histone Show metadata Download track Track metadata identifier NGCEEJIA4Q24QB data_source CEEHRC Download track Download number_of_intervals 42,773 bp_covered 53,721,758 output_type peaks genome_build hg38 cell_type Luminal epithelial cell biosample_type Primary cell biosample_term_id CL:0002326 tissue_category Female Reproductive encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me3 assay ChIP-seq file_format bed bed3 file_size 351,112 downloaded_date 03/12/2021 release_date 11/06/2019 date_added_to_filer 01/19/2023 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/98900.CEEHRC.CEMT0179.H3K4me3.peak_calls.bed.gz processed_file_md5 747cfe625a40376196160a96d17ac321 wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/98900.CEEHRC.CEMT0179.H3K4me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/98900.CEEHRC.CEMT0179.H3K4me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/98900.CEEHRC.CEMT0179.H3K4me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/98900.CEEHRC.CEMT0179.H3K4me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 91eb86df5a1cc876f179739c87a6e50e data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me3 peaks track_description version=build 2020-10;Original_cell_type=Luminal Cells;ID=CEMT0179;disease=None;donor_id=20;donor_age=41;donor_sex=Female;sample_ontology=https://purl.obolibrary.org/obo/CL_0002326;schema=BED3;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/CEEHRC.html;original_biosample_term_id=CL_0002326;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name CEEHRC Luminal epithelial cell ChIP-seq H3K4me3-histone-mark peaks (bed3) [Life stage: Adult] [Histone ChIP-seq peaks]
H3K4me3 • CD4+ NGCEEJLW7BJ6UB • CEEHRC27863956 ChIP-seq CD4+ Histone Show metadata Download track Track metadata identifier NGCEEJLW7BJ6UB data_source CEEHRC Download track Download number_of_intervals 23,118 bp_covered 7,632,459 output_type peaks genome_build hg38 cell_type CD4+ biosample_type Primary cell biosample_term_id CL:0000492 tissue_category Blood encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me3 assay ChIP-seq file_format bed bed5 file_size 291,517 downloaded_date 03/12/2021 release_date 10/19/2020 date_added_to_filer 03/06/2025 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/84031.CEEHRC.MS032001.H3K4me3.peak_calls.bed.gz processed_file_md5 1a0b4e8f8bd1c7488be707766f78cc1a wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/84031.CEEHRC.MS032001.H3K4me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/84031.CEEHRC.MS032001.H3K4me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/84031.CEEHRC.MS032001.H3K4me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/84031.CEEHRC.MS032001.H3K4me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 be778eaeab1b4d4382bdc99783f5cafa data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me3 peaks track_description version=build 2020-10;Original_cell_type=CD4-positive helper T cell;ID=MS032001;disease=Scleroderma;donor_id=McGill0320;donor_age=NA;donor_sex=Unknown;sample_ontology=https://purl.obolibrary.org/obo/CL_0000492;schema=BED5;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/CEEHRC.html;original_biosample_term_id=CL_0000492;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name CEEHRC CD4+ ChIP-seq H3K4me3-histone-mark peaks (bed5) [Histone ChIP-seq peaks]
H3K4me3 • CD4+ NGCEEJUYRWLEU7 • CEEHRC27863956 ChIP-seq CD4+ Histone Show metadata Download track Track metadata identifier NGCEEJUYRWLEU7 data_source CEEHRC Download track Download number_of_intervals 32,791 bp_covered 53,396,393 output_type peaks genome_build hg38 cell_type CD4+ biosample_type Primary cell biosample_term_id CL:0000492 tissue_category Blood encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me3 assay ChIP-seq file_format bed bed3 file_size 286,004 downloaded_date 03/12/2021 release_date 10/12/2018 date_added_to_filer 01/19/2023 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/98802.CEEHRC.CEMT0153.H3K4me3.peak_calls.bed.gz processed_file_md5 86d38caf2d1be00da3d3bf67b9b2975e wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/98802.CEEHRC.CEMT0153.H3K4me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/98802.CEEHRC.CEMT0153.H3K4me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/98802.CEEHRC.CEMT0153.H3K4me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/98802.CEEHRC.CEMT0153.H3K4me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 7c826fe6313a38cac3ce9275fbd4838e data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me3 peaks track_description version=build 2020-10;Original_cell_type=Naive CD4+ T Cells;ID=CEMT0153;disease=None;donor_id=000N3;donor_age=0-1;donor_sex=Male;sample_ontology=https://purl.obolibrary.org/obo/UBERON_0010393;schema=BED3;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/CEEHRC.html;original_biosample_term_id=UBERON_0010393;is_hg38_lifted=no system_category Cardiovascular life_stage Newborn track_name CEEHRC CD4+ ChIP-seq H3K4me3-histone-mark peaks (bed3) [Life stage: Newborn] [Histone ChIP-seq peaks]
H3K4me3 • Amygdala NGCEEKJLGXYBDM • CEEHRC27863956 ChIP-seq Amygdala Histone Show metadata Download track Track metadata identifier NGCEEKJLGXYBDM data_source CEEHRC Download track Download number_of_intervals 51,894 bp_covered 37,094,706 output_type peaks genome_build hg38 cell_type Amygdala biosample_type Primary tissue biosample_term_id UBERON:0001876 tissue_category Brain encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me3 assay ChIP-seq file_format bed bed5 file_size 695,483 downloaded_date 03/12/2021 release_date 10/19/2020 date_added_to_filer 03/06/2025 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/84538.CEEHRC.MS047701.H3K4me3.peak_calls.bed.gz processed_file_md5 6bb6705c86c7441c5c9869bf89a33e1b wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/84538.CEEHRC.MS047701.H3K4me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/84538.CEEHRC.MS047701.H3K4me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/84538.CEEHRC.MS047701.H3K4me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/84538.CEEHRC.MS047701.H3K4me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 872f9e4a31f4434da221bd6058db6771 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me3 peaks track_description version=build 2020-10;Original_cell_type=Amygdala;ID=MS047701;disease=Unknown;donor_id=McGill0477;donor_age=NA;donor_sex=Unknown;sample_ontology=https://purl.obolibrary.org/obo/UBERON_0001876;schema=BED5;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/CEEHRC.html;original_biosample_term_id=UBERON_0001876;is_hg38_lifted=no system_category Nervous life_stage Unknown track_name CEEHRC Amygdala ChIP-seq H3K4me3-histone-mark peaks (bed5) [Histone ChIP-seq peaks]
H3K4me3 • Luminal epithelial cell NGCEEKRA4UJ24O • CEEHRC27863956 ChIP-seq Luminal epithelial cell Histone Show metadata Download track Track metadata identifier NGCEEKRA4UJ24O data_source CEEHRC Download track Download number_of_intervals 53,999 bp_covered 61,016,539 output_type peaks genome_build hg38 cell_type Luminal epithelial cell biosample_type Primary cell biosample_term_id CL:0002326 tissue_category Female Reproductive encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me3 assay ChIP-seq file_format bed bed3 file_size 404,055 downloaded_date 03/12/2021 release_date 11/06/2019 date_added_to_filer 01/19/2023 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/98994.CEEHRC.CEMT0183.H3K4me3.peak_calls.bed.gz processed_file_md5 c3d0919561041b5581a9d160efa0ae5a wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/98994.CEEHRC.CEMT0183.H3K4me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/98994.CEEHRC.CEMT0183.H3K4me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/98994.CEEHRC.CEMT0183.H3K4me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/98994.CEEHRC.CEMT0183.H3K4me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 e6d9d851c52ad294d3fbbd7059818c29 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me3 peaks track_description version=build 2020-10;Original_cell_type=Luminal cell;ID=CEMT0183;disease=None;donor_id=22-18;donor_age=22;donor_sex=Female;sample_ontology=https://purl.obolibrary.org/obo/CL_0002326;schema=BED3;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/CEEHRC.html;original_biosample_term_id=CL_0002326;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name CEEHRC Luminal epithelial cell ChIP-seq H3K4me3-histone-mark peaks (bed3) [Life stage: Adult] [Histone ChIP-seq peaks]
H3K4me3 • Luminal epithelial cell NGCEEKRM72O55A • CEEHRC27863956 ChIP-seq Luminal epithelial cell Histone Show metadata Download track Track metadata identifier NGCEEKRM72O55A data_source CEEHRC Download track Download number_of_intervals 36,190 bp_covered 45,239,116 output_type peaks genome_build hg38 cell_type Luminal epithelial cell biosample_type Primary cell biosample_term_id CL:0002326 tissue_category Female Reproductive encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me3 assay ChIP-seq file_format bed bed3 file_size 308,091 downloaded_date 03/12/2021 release_date 10/31/2019 date_added_to_filer 01/19/2023 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/99306.CEEHRC.CEMT0196.H3K4me3.peak_calls.bed.gz processed_file_md5 844a43c0fbd8317a78e8031a63aef434 wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/99306.CEEHRC.CEMT0196.H3K4me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/99306.CEEHRC.CEMT0196.H3K4me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/99306.CEEHRC.CEMT0196.H3K4me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/99306.CEEHRC.CEMT0196.H3K4me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 d01618ecbfd89f80c483a0e2170f59ea data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me3 peaks track_description version=build 2020-10;Original_cell_type=Luminal cell;ID=CEMT0196;disease=None;donor_id=30-18;donor_age=46;donor_sex=Female;sample_ontology=https://purl.obolibrary.org/obo/CL_0002326;schema=BED3;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/CEEHRC.html;original_biosample_term_id=CL_0002326;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name CEEHRC Luminal epithelial cell ChIP-seq H3K4me3-histone-mark peaks (bed3) [Life stage: Adult] [Histone ChIP-seq peaks]
H3K4me3 • Basal cell NGCEEKSGRX2EUN • CEEHRC27863956 ChIP-seq Basal cell Histone Show metadata Download track Track metadata identifier NGCEEKSGRX2EUN data_source CEEHRC Download track Download number_of_intervals 46,834 bp_covered 54,744,419 output_type peaks genome_build hg38 cell_type Basal cell biosample_type Primary cell biosample_term_id CL:0000646 tissue_category Skin encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me3 assay ChIP-seq file_format bed bed3 file_size 382,587 downloaded_date 03/12/2021 release_date 10/31/2019 date_added_to_filer 01/19/2023 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/99271.CEEHRC.CEMT0194.H3K4me3.peak_calls.bed.gz processed_file_md5 e4c51fc3a174c086c884368fb7562df4 wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/99271.CEEHRC.CEMT0194.H3K4me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/99271.CEEHRC.CEMT0194.H3K4me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/99271.CEEHRC.CEMT0194.H3K4me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/99271.CEEHRC.CEMT0194.H3K4me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 8eb076d63e637045156318afafb0192c data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me3 peaks track_description version=build 2020-10;Original_cell_type=Basal cells;ID=CEMT0194;disease=None;donor_id=30-18;donor_age=46;donor_sex=Female;sample_ontology=https://purl.obolibrary.org/obo/CL_0002324;schema=BED3;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/CEEHRC.html;original_biosample_term_id=CL_0002324;is_hg38_lifted=no system_category Integumentary life_stage Fetal track_name CEEHRC Basal cell ChIP-seq H3K4me3-histone-mark peaks (bed3) [Life stage: Fetal] [Histone ChIP-seq peaks]
H3K4me3 • CD4+ NGCEEKXVAMQ6XC • CEEHRC27863956 ChIP-seq CD4+ Histone Show metadata Download track Track metadata identifier NGCEEKXVAMQ6XC data_source CEEHRC Download track Download number_of_intervals 9,724 bp_covered 3,960,548 output_type peaks genome_build hg38 cell_type CD4+ biosample_type Primary cell biosample_term_id CL:0000492 tissue_category Blood encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me3 assay ChIP-seq file_format bed bed5 file_size 126,937 downloaded_date 03/12/2021 release_date 10/19/2020 date_added_to_filer 03/06/2025 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/84044.CEEHRC.MS032101.H3K4me3.peak_calls.bed.gz processed_file_md5 9017439eb691da0846b59c845bd0e09b wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/84044.CEEHRC.MS032101.H3K4me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/84044.CEEHRC.MS032101.H3K4me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/84044.CEEHRC.MS032101.H3K4me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/84044.CEEHRC.MS032101.H3K4me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 05590b4f903063abf095f58cdcebed09 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me3 peaks track_description version=build 2020-10;Original_cell_type=CD4-positive helper T cell;ID=MS032101;disease=Scleroderma;donor_id=McGill0321;donor_age=NA;donor_sex=Unknown;sample_ontology=https://purl.obolibrary.org/obo/CL_0000492;schema=BED5;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/CEEHRC.html;original_biosample_term_id=CL_0000492;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name CEEHRC CD4+ ChIP-seq H3K4me3-histone-mark peaks (bed5) [Histone ChIP-seq peaks]
H3K4me3 • Thyroid NGCEEL5MDXLKGO • CEEHRC27863956 ChIP-seq Thyroid Histone Show metadata Download track Track metadata identifier NGCEEL5MDXLKGO data_source CEEHRC Download track Download number_of_intervals 40,672 bp_covered 47,762,101 output_type peaks genome_build hg38 cell_type Thyroid biosample_type Primary tissue biosample_term_id UBERON:0002046 tissue_category Endocrine encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me3 assay ChIP-seq file_format bed bed3 file_size 349,038 downloaded_date 03/12/2021 release_date 10/12/2018 date_added_to_filer 01/19/2023 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/98142.CEEHRC.CEMT0088.H3K4me3.peak_calls.bed.gz processed_file_md5 38f4ad6f247e7620ddb923099b474e2e wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/98142.CEEHRC.CEMT0088.H3K4me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/98142.CEEHRC.CEMT0088.H3K4me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/98142.CEEHRC.CEMT0088.H3K4me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/98142.CEEHRC.CEMT0088.H3K4me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 d84d121c9e1759fc61ca0315a7c81fa6 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me3 peaks track_description version=build 2020-10;Original_cell_type=Thyroid;ID=CEMT0088;disease=None;donor_id=SW-TTP-184;donor_age=38;donor_sex=Female;sample_ontology=https://purl.obolibrary.org/obo/UBERON_0002046;schema=BED3;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/CEEHRC.html;original_biosample_term_id=UBERON_0002046;is_hg38_lifted=no system_category Endocrine life_stage Adult track_name CEEHRC Thyroid ChIP-seq H3K4me3-histone-mark peaks (bed3) [Life stage: Adult] [Histone ChIP-seq peaks]
H3K4me3 • Frontal lobe NGCEELJEDOFMOJ • CEEHRC27863956 ChIP-seq Frontal lobe Histone Show metadata Download track Track metadata identifier NGCEELJEDOFMOJ data_source CEEHRC Download track Download number_of_intervals 51,222 bp_covered 59,153,187 output_type peaks genome_build hg38 cell_type Frontal lobe biosample_type Primary tissue biosample_term_id UBERON:0016525 tissue_category Brain encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me3 assay ChIP-seq file_format bed bed3 file_size 422,029 downloaded_date 03/12/2021 release_date 10/12/2018 date_added_to_filer 01/19/2023 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/98567.CEEHRC.CEMT0081.H3K4me3.peak_calls.bed.gz processed_file_md5 b5230ebe28c6b900c7441fad0b41af6c wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/98567.CEEHRC.CEMT0081.H3K4me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/98567.CEEHRC.CEMT0081.H3K4me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/98567.CEEHRC.CEMT0081.H3K4me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/98567.CEEHRC.CEMT0081.H3K4me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 e65b5d07437e47fe26024fdbdd23e881 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me3 peaks track_description version=build 2020-10;Original_cell_type=Brain-Frontal Lobe-Right;ID=CEMT0081;disease=Brain Oligodendroglioma-Anaplastic;donor_id=VNA118;donor_age=58;donor_sex=Female;sample_ontology=https://purl.obolibrary.org/obo/CL_0000128;schema=BED3;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/CEEHRC.html;original_biosample_term_id=CL_0000128;is_hg38_lifted=no system_category Nervous life_stage Adult track_name CEEHRC Frontal lobe ChIP-seq H3K4me3-histone-mark peaks (bed3) [Life stage: Adult] [Histone ChIP-seq peaks]
H3K4me3 • Large intestine NGCEELRE63JNXT • CEEHRC27863956 ChIP-seq Large intestine Histone Show metadata Download track Track metadata identifier NGCEELRE63JNXT data_source CEEHRC Download track Download number_of_intervals 19,715 bp_covered 27,353,327 output_type peaks genome_build hg38 cell_type Large intestine biosample_type Primary tissue biosample_term_id UBERON:0000059 tissue_category Digestive encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me3 assay ChIP-seq file_format bed bed3 file_size 173,854 downloaded_date 03/12/2021 release_date 10/11/2018 date_added_to_filer 01/19/2023 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/97410.CEEHRC.CEMT0033.H3K4me3.peak_calls.bed.gz processed_file_md5 75e5544e36229868dd6a4e5213574b9d wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/97410.CEEHRC.CEMT0033.H3K4me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/97410.CEEHRC.CEMT0033.H3K4me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/97410.CEEHRC.CEMT0033.H3K4me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/97410.CEEHRC.CEMT0033.H3K4me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 817e3f2e0f06b445b8559abb43184e88 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me3 peaks track_description version=build 2020-10;Original_cell_type=Large Intestine-Colon-Ascending (Right);ID=CEMT0033;disease=None;donor_id=AKCC-52;donor_age=82;donor_sex=Female;sample_ontology=https://purl.obolibrary.org/obo/UBERON_0000397;schema=BED3;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/CEEHRC.html;original_biosample_term_id=UBERON_0000397;is_hg38_lifted=no system_category Digestive life_stage Adult track_name CEEHRC Large intestine ChIP-seq H3K4me3-histone-mark peaks (bed3) [Life stage: Adult] [Histone ChIP-seq peaks]
H3K4me3 • Thyroid NGCEELUCLBDOO7 • CEEHRC27863956 ChIP-seq Thyroid Histone Show metadata Download track Track metadata identifier NGCEELUCLBDOO7 data_source CEEHRC Download track Download number_of_intervals 34,618 bp_covered 49,265,266 output_type peaks genome_build hg38 cell_type Thyroid biosample_type Primary tissue biosample_term_id UBERON:0002046 tissue_category Endocrine encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me3 assay ChIP-seq file_format bed bed3 file_size 298,026 downloaded_date 03/12/2021 release_date 10/12/2018 date_added_to_filer 01/19/2023 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/98168.CEEHRC.CEMT0091.H3K4me3.peak_calls.bed.gz processed_file_md5 357ec683a6d970f584ddce1330cd27bf wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/98168.CEEHRC.CEMT0091.H3K4me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/98168.CEEHRC.CEMT0091.H3K4me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/98168.CEEHRC.CEMT0091.H3K4me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/98168.CEEHRC.CEMT0091.H3K4me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 10e89c300247289bbeab03908b0aa177 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me3 peaks track_description version=build 2020-10;Original_cell_type=Thyroid;ID=CEMT0091;disease=Thyroid Papillary Carcinoma;donor_id=SW-TTP-193;donor_age=44;donor_sex=Female;sample_ontology=https://purl.obolibrary.org/obo/UBERON_0002046;schema=BED3;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/CEEHRC.html;original_biosample_term_id=UBERON_0002046;is_hg38_lifted=no system_category Endocrine life_stage Adult track_name CEEHRC Thyroid ChIP-seq H3K4me3-histone-mark peaks (bed3) [Life stage: Adult] [Histone ChIP-seq peaks]
H3K4me3 • T-cell NGCEELVFGQRGHV • CEEHRC27863956 ChIP-seq T-cell Histone Show metadata Download track Track metadata identifier NGCEELVFGQRGHV data_source CEEHRC Download track Download number_of_intervals 73,340 bp_covered 49,587,794 output_type peaks genome_build hg38 cell_type T-cell biosample_type Primary cell biosample_term_id CL:0000084 tissue_category Immune encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me3 assay ChIP-seq file_format bed bed5 file_size 915,737 downloaded_date 03/12/2021 release_date 10/19/2020 date_added_to_filer 03/06/2025 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/83407.CEEHRC.MS010003.H3K4me3.peak_calls.bed.gz processed_file_md5 0c4b49d905464218ec1ff3cbef748fd3 wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/83407.CEEHRC.MS010003.H3K4me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/83407.CEEHRC.MS010003.H3K4me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/83407.CEEHRC.MS010003.H3K4me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/83407.CEEHRC.MS010003.H3K4me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 b37ff0ff4ddd89b9a071d8bb5f2d4422 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me3 peaks track_description version=build 2020-10;Original_cell_type=T cell;ID=MS010003;disease=Healthy;donor_id=McGill0100;donor_age=59-54;donor_sex=Female;sample_ontology=https://purl.obolibrary.org/obo/CL_0000084;schema=BED5;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/CEEHRC.html;original_biosample_term_id=CL_0000084;is_hg38_lifted=no system_category Lymphatic life_stage Adult track_name CEEHRC T-cell ChIP-seq H3K4me3-histone-mark peaks (bed5) [Life stage: Adult] [Histone ChIP-seq peaks]
H3K4me3 • Thyroid NGCEELY6447FMK • CEEHRC27863956 ChIP-seq Thyroid Histone Show metadata Download track Track metadata identifier NGCEELY6447FMK data_source CEEHRC Download track Download number_of_intervals 43,377 bp_covered 55,725,944 output_type peaks genome_build hg38 cell_type Thyroid biosample_type Primary tissue biosample_term_id UBERON:0002046 tissue_category Endocrine encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me3 assay ChIP-seq file_format bed bed3 file_size 373,446 downloaded_date 03/12/2021 release_date 10/12/2018 date_added_to_filer 01/19/2023 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/98332.CEEHRC.CEMT0099.H3K4me3.peak_calls.bed.gz processed_file_md5 26afe6c63434a4b9799474c8764676ac wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/98332.CEEHRC.CEMT0099.H3K4me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/98332.CEEHRC.CEMT0099.H3K4me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/98332.CEEHRC.CEMT0099.H3K4me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/98332.CEEHRC.CEMT0099.H3K4me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 a2b8252fd12f414d857031cc0c462b03 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me3 peaks track_description version=build 2020-10;Original_cell_type=Thyroid;ID=CEMT0099;disease=Thyroid Goiter;donor_id=SW-TTP-168;donor_age=30;donor_sex=Female;sample_ontology=https://purl.obolibrary.org/obo/UBERON_0002046;schema=BED3;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/CEEHRC.html;original_biosample_term_id=UBERON_0002046;is_hg38_lifted=no system_category Endocrine life_stage Adult track_name CEEHRC Thyroid ChIP-seq H3K4me3-histone-mark peaks (bed3) [Life stage: Adult] [Histone ChIP-seq peaks]
H3K4me3 • Amygdala NGCEELZRSVRAYB • CEEHRC27863956 ChIP-seq Amygdala Histone Show metadata Download track Track metadata identifier NGCEELZRSVRAYB data_source CEEHRC Download track Download number_of_intervals 61,039 bp_covered 52,785,558 output_type peaks genome_build hg38 cell_type Amygdala biosample_type Primary tissue biosample_term_id UBERON:0001876 tissue_category Brain encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me3 assay ChIP-seq file_format bed bed5 file_size 828,693 downloaded_date 03/12/2021 release_date 10/19/2020 date_added_to_filer 03/06/2025 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/84508.CEEHRC.MS047501.H3K4me3.peak_calls.bed.gz processed_file_md5 6b264ea1f83f68ee5c0582242bdae38a wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/84508.CEEHRC.MS047501.H3K4me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/84508.CEEHRC.MS047501.H3K4me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/84508.CEEHRC.MS047501.H3K4me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/84508.CEEHRC.MS047501.H3K4me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 bd4aa23c1e7b6194bcd6d7d1eb0447c8 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me3 peaks track_description version=build 2020-10;Original_cell_type=Amygdala;ID=MS047501;disease=Unknown;donor_id=McGill0475;donor_age=NA;donor_sex=Unknown;sample_ontology=https://purl.obolibrary.org/obo/UBERON_0001876;schema=BED5;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/CEEHRC.html;original_biosample_term_id=UBERON_0001876;is_hg38_lifted=no system_category Nervous life_stage Unknown track_name CEEHRC Amygdala ChIP-seq H3K4me3-histone-mark peaks (bed5) [Histone ChIP-seq peaks]
H3K4me3 • Large intestine NGCEEM2TPDJGC7 • CEEHRC27863956 ChIP-seq Large intestine Histone Show metadata Download track Track metadata identifier NGCEEM2TPDJGC7 data_source CEEHRC Download track Download number_of_intervals 23,457 bp_covered 34,458,602 output_type peaks genome_build hg38 cell_type Large intestine biosample_type Primary tissue biosample_term_id UBERON:0000059 tissue_category Digestive encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me3 assay ChIP-seq file_format bed bed3 file_size 197,425 downloaded_date 03/12/2021 release_date 10/11/2018 date_added_to_filer 01/19/2023 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/97484.CEEHRC.CEMT0050.H3K4me3.peak_calls.bed.gz processed_file_md5 4201e043c94324984b4d1a1022339833 wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/97484.CEEHRC.CEMT0050.H3K4me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/97484.CEEHRC.CEMT0050.H3K4me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/97484.CEEHRC.CEMT0050.H3K4me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/97484.CEEHRC.CEMT0050.H3K4me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 544890a1d0cd063a7ccff3fa28c5e42e data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me3 peaks track_description version=build 2020-10;Original_cell_type=Large Intestine-Colon-Rectosigmoid;ID=CEMT0050;disease=None;donor_id=AK-DIV-01;donor_age=53;donor_sex=Male;sample_ontology=https://purl.obolibrary.org/obo/UBERON_0001159;schema=BED3;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/CEEHRC.html;original_biosample_term_id=UBERON_0001159;is_hg38_lifted=no system_category Digestive life_stage Adult track_name CEEHRC Large intestine ChIP-seq H3K4me3-histone-mark peaks (bed3) [Life stage: Adult] [Histone ChIP-seq peaks]
H3K4me3 • Thyroid NGCEEMEN2TIDGB • CEEHRC27863956 ChIP-seq Thyroid Histone Show metadata Download track Track metadata identifier NGCEEMEN2TIDGB data_source CEEHRC Download track Download number_of_intervals 21,149 bp_covered 30,363,929 output_type peaks genome_build hg38 cell_type Thyroid biosample_type Primary tissue biosample_term_id UBERON:0002046 tissue_category Endocrine encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me3 assay ChIP-seq file_format bed bed3 file_size 173,583 downloaded_date 03/12/2021 release_date 10/11/2018 date_added_to_filer 01/19/2023 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/96976.CEEHRC.CEMT0043.H3K4me3.peak_calls.bed.gz processed_file_md5 18b7f628ae3127da3145cda603628093 wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/96976.CEEHRC.CEMT0043.H3K4me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/96976.CEEHRC.CEMT0043.H3K4me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/96976.CEEHRC.CEMT0043.H3K4me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/96976.CEEHRC.CEMT0043.H3K4me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 82fb2690861d408aede2066d05090e32 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me3 peaks track_description version=build 2020-10;Original_cell_type=Thyroid;ID=CEMT0043;disease=Thyroid Adenoma-Follicular;donor_id=SW-TTP-170;donor_age=46;donor_sex=Female;sample_ontology=NCI - cancer ontology : C0205647 , NCI - anatomic site ontology : C12400 , Ontobee : UBERON_0002046;schema=BED3;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/CEEHRC.html;original_biosample_term_id=UBERON_0002046;is_hg38_lifted=no system_category Endocrine life_stage Adult track_name CEEHRC Thyroid ChIP-seq H3K4me3-histone-mark peaks (bed3) [Life stage: Adult] [Histone ChIP-seq peaks]
H3K4me3 • Monocyte NGCEEMIIHSXDG3 • CEEHRC27863956 ChIP-seq Monocyte Histone Show metadata Download track Track metadata identifier NGCEEMIIHSXDG3 data_source CEEHRC Download track Download number_of_intervals 35,377 bp_covered 16,172,911 output_type peaks genome_build hg38 cell_type Monocyte biosample_type Primary cell biosample_term_id CL:0000576 tissue_category Blood encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me3 assay ChIP-seq file_format bed bed5 file_size 451,088 downloaded_date 03/12/2021 release_date 10/19/2020 date_added_to_filer 03/06/2025 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/83512.CEEHRC.MS012704.H3K4me3.peak_calls.bed.gz processed_file_md5 e1bbef962d98ac5393db9a0080fd2916 wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/83512.CEEHRC.MS012704.H3K4me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/83512.CEEHRC.MS012704.H3K4me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/83512.CEEHRC.MS012704.H3K4me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/83512.CEEHRC.MS012704.H3K4me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 aa456729d9df3e19fd2ea2b61c038fab data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me3 peaks track_description version=build 2020-10;Original_cell_type=Monocyte;ID=MS012704;disease=Healthy;donor_id=McGill0127;donor_age=33-38;donor_sex=Male;sample_ontology=https://purl.obolibrary.org/obo/CL_0000576;schema=BED5;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/CEEHRC.html;original_biosample_term_id=CL_0000576;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name CEEHRC Monocyte ChIP-seq H3K4me3-histone-mark peaks (bed5) [Life stage: Adult] [Histone ChIP-seq peaks]