H3K4me3 • Luminal progenitor cell NGCEEQ2OJX3AZH • CEEHRC27863956 ChIP-seq Luminal progenitor cell Histone Show metadata Download track Track metadata identifier NGCEEQ2OJX3AZH data_source CEEHRC Download track Download number_of_intervals 42,620 bp_covered 51,624,134 output_type peaks genome_build hg38 cell_type Luminal progenitor cell biosample_type Primary cell biosample_term_id UBERON:0000310 tissue_category Female Reproductive encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me3 assay ChIP-seq file_format bed bed3 file_size 365,616 downloaded_date 03/12/2021 release_date 10/31/2019 date_added_to_filer 01/19/2023 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/99362.CEEHRC.CEMT0199.H3K4me3.peak_calls.bed.gz processed_file_md5 fa1c0382336fdfe210cc36aff7df8c58 wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/99362.CEEHRC.CEMT0199.H3K4me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/99362.CEEHRC.CEMT0199.H3K4me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/99362.CEEHRC.CEMT0199.H3K4me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/99362.CEEHRC.CEMT0199.H3K4me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 e1e924af61b336b5b49ef3cf5f65f727 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me3 peaks track_description version=build 2020-10;Original_cell_type=Luminal progenitor;ID=CEMT0199;disease=None;donor_id=15-18;donor_age=48;donor_sex=Female;sample_ontology=https://purl.obolibrary.org/obo/CL_0002326;schema=BED3;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/CEEHRC.html;original_biosample_term_id=CL_0002326;is_hg38_lifted=no system_category Reproductive life_stage Fetal track_name CEEHRC Luminal progenitor cell ChIP-seq H3K4me3-histone-mark peaks (bed3) [Life stage: Fetal] [Histone ChIP-seq peaks]
H3K4me3 • Amygdala NGCEEQ6DBMXZPK • CEEHRC27863956 ChIP-seq Amygdala Histone Show metadata Download track Track metadata identifier NGCEEQ6DBMXZPK data_source CEEHRC Download track Download number_of_intervals 74,851 bp_covered 61,707,093 output_type peaks genome_build hg38 cell_type Amygdala biosample_type Primary tissue biosample_term_id UBERON:0001876 tissue_category Brain encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me3 assay ChIP-seq file_format bed bed5 file_size 1,010,240 downloaded_date 03/12/2021 release_date 10/19/2020 date_added_to_filer 03/06/2025 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/84493.CEEHRC.MS047401.H3K4me3.peak_calls.bed.gz processed_file_md5 9c742a44665650a9142c5cd7e3ba4e4e wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/84493.CEEHRC.MS047401.H3K4me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/84493.CEEHRC.MS047401.H3K4me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/84493.CEEHRC.MS047401.H3K4me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/84493.CEEHRC.MS047401.H3K4me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 ca48872189e9141a19fe721e07daff49 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me3 peaks track_description version=build 2020-10;Original_cell_type=Amygdala;ID=MS047401;disease=Unknown;donor_id=McGill0474;donor_age=NA;donor_sex=Unknown;sample_ontology=https://purl.obolibrary.org/obo/UBERON_0001876;schema=BED5;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/CEEHRC.html;original_biosample_term_id=UBERON_0001876;is_hg38_lifted=no system_category Nervous life_stage Unknown track_name CEEHRC Amygdala ChIP-seq H3K4me3-histone-mark peaks (bed5) [Histone ChIP-seq peaks]
H3K4me3 • B cell NGCEEQ6YDS3QCD • CEEHRC27863956 ChIP-seq B cell Histone Show metadata Download track Track metadata identifier NGCEEQ6YDS3QCD data_source CEEHRC Download track Download number_of_intervals 28,539 bp_covered 22,414,353 output_type peaks genome_build hg38 cell_type B cell biosample_type Primary cell biosample_term_id CL:0000236 tissue_category Immune encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me3 assay ChIP-seq file_format bed bed3 file_size 240,247 downloaded_date 03/12/2021 release_date 10/12/2018 date_added_to_filer 01/19/2023 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/98130.CEEHRC.CEMT0097.H3K4me3.peak_calls.bed.gz processed_file_md5 178e205b730b8c20618ef66de884871c wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/98130.CEEHRC.CEMT0097.H3K4me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/98130.CEEHRC.CEMT0097.H3K4me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/98130.CEEHRC.CEMT0097.H3K4me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/98130.CEEHRC.CEMT0097.H3K4me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 af3ec582d29824298ab3a91a03d0786e data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me3 peaks track_description version=build 2020-10;Original_cell_type=B cells;ID=CEMT0097;disease=Blood Leukemia-Chronic lymphocytic leukemia;donor_id=269-54;donor_age=90+;donor_sex=Male;sample_ontology=https://purl.obolibrary.org/obo/CL_0000236;schema=BED3;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/CEEHRC.html;original_biosample_term_id=CL_0000236;is_hg38_lifted=no system_category Lymphatic life_stage Adult track_name CEEHRC B cell ChIP-seq H3K4me3-histone-mark peaks (bed3) [Life stage: Adult] [Histone ChIP-seq peaks]
H3K4me3 • Temporal lobe NGCEEQAOGBEC5N • CEEHRC27863956 ChIP-seq Temporal lobe Histone Show metadata Download track Track metadata identifier NGCEEQAOGBEC5N data_source CEEHRC Download track Download number_of_intervals 24,746 bp_covered 34,889,857 output_type peaks genome_build hg38 cell_type Temporal lobe biosample_type Primary tissue biosample_term_id UBERON:0001871 tissue_category Brain encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me3 assay ChIP-seq file_format bed bed3 file_size 217,505 downloaded_date 03/12/2021 release_date 10/11/2018 date_added_to_filer 01/19/2023 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/96776.CEEHRC.CEMT0019.H3K4me3.peak_calls.bed.gz processed_file_md5 a2ecd451f6cdc16c4a96756f02c3dea6 wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/96776.CEEHRC.CEMT0019.H3K4me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/96776.CEEHRC.CEMT0019.H3K4me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/96776.CEEHRC.CEMT0019.H3K4me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/96776.CEEHRC.CEMT0019.H3K4me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 a36ad7d369cb8e6e4bf4b4b239d66a66 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me3 peaks track_description version=build 2020-10;Original_cell_type=Brain-Temporal lobe-Left;ID=CEMT0019;disease=Brain-Temporal lobe-Left Oligodendroglioma;donor_id=VNA42;donor_age=46;donor_sex=Female;sample_ontology=https://purl.obolibrary.org/obo/UBERON_0000955;schema=BED3;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/CEEHRC.html;original_biosample_term_id=UBERON_0000955;is_hg38_lifted=no system_category Nervous life_stage Adult track_name CEEHRC Temporal lobe ChIP-seq H3K4me3-histone-mark peaks (bed3) [Life stage: Adult] [Histone ChIP-seq peaks]
H3K4me3 • Basal cell NGCEEQTEEECWXN • CEEHRC27863956 ChIP-seq Basal cell Histone Show metadata Download track Track metadata identifier NGCEEQTEEECWXN data_source CEEHRC Download track Download number_of_intervals 62,951 bp_covered 63,551,765 output_type peaks genome_build hg38 cell_type Basal cell biosample_type Primary cell biosample_term_id CL:0000646 tissue_category Skin encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me3 assay ChIP-seq file_format bed bed3 file_size 524,132 downloaded_date 03/12/2021 release_date 11/06/2019 date_added_to_filer 01/19/2023 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/98862.CEEHRC.CEMT0177.H3K4me3.peak_calls.bed.gz processed_file_md5 87582b258ea0d14eddffc7086fdbe1ae wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/98862.CEEHRC.CEMT0177.H3K4me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/98862.CEEHRC.CEMT0177.H3K4me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/98862.CEEHRC.CEMT0177.H3K4me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/98862.CEEHRC.CEMT0177.H3K4me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 f1442c5fd2c26df081a94fbca67a6c50 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me3 peaks track_description version=build 2020-10;Original_cell_type=Basal cells;ID=CEMT0177;disease=None;donor_id=20;donor_age=41;donor_sex=Female;sample_ontology=https://purl.obolibrary.org/obo/CL_0002324;schema=BED3;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/CEEHRC.html;original_biosample_term_id=CL_0002324;is_hg38_lifted=no system_category Integumentary life_stage Adult track_name CEEHRC Basal cell ChIP-seq H3K4me3-histone-mark peaks (bed3) [Life stage: Adult] [Histone ChIP-seq peaks]
H3K4me3 • Skeletal muscle tissue NGCEEQTEOJNXIZ • CEEHRC27863956 ChIP-seq Skeletal muscle tissue Histone Show metadata Download track Track metadata identifier NGCEEQTEOJNXIZ data_source CEEHRC Download track Download number_of_intervals 63,028 bp_covered 48,550,009 output_type peaks genome_build hg38 cell_type Skeletal muscle tissue biosample_type Primary tissue biosample_term_id UBERON:0001134 tissue_category Skeletal Muscle encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me3 assay ChIP-seq file_format bed bed5 file_size 796,316 downloaded_date 03/12/2021 release_date 10/19/2020 date_added_to_filer 03/06/2025 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/83035.CEEHRC.MS001901.H3K4me3.peak_calls.bed.gz processed_file_md5 948f8ff29838568e4d39767a6719475d wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/83035.CEEHRC.MS001901.H3K4me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/83035.CEEHRC.MS001901.H3K4me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/83035.CEEHRC.MS001901.H3K4me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/83035.CEEHRC.MS001901.H3K4me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 a58bfc99452b897bee9dd05d031cbb23 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me3 peaks track_description version=build 2020-10;Original_cell_type=Skeletal muscle tissue;ID=MS001901;disease=Unknown;donor_id=McGill0019;donor_age=23;donor_sex=Female;sample_ontology=https://purl.obolibrary.org/obo/UBERON_0001134;schema=BED5;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/CEEHRC.html;original_biosample_term_id=UBERON_0001134;is_hg38_lifted=no system_category Muscular life_stage Adult track_name CEEHRC Skeletal muscle tissue ChIP-seq H3K4me3-histone-mark peaks (bed5) [Life stage: Adult] [Histone ChIP-seq peaks]
H3K4me3 • Basal cell NGCEER22KBYPKY • CEEHRC27863956 ChIP-seq Basal cell Histone Show metadata Download track Track metadata identifier NGCEER22KBYPKY data_source CEEHRC Download track Download number_of_intervals 26,230 bp_covered 34,942,191 output_type peaks genome_build hg38 cell_type Basal cell biosample_type Primary cell biosample_term_id CL:0000646 tissue_category Skin encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me3 assay ChIP-seq file_format bed bed3 file_size 228,323 downloaded_date 03/12/2021 release_date 10/11/2018 date_added_to_filer 01/19/2023 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/97174.CEEHRC.CEMT0035.H3K4me3.peak_calls.bed.gz processed_file_md5 9b070b49cb512c0c7bb70b9c598bbeda wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/97174.CEEHRC.CEMT0035.H3K4me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/97174.CEEHRC.CEMT0035.H3K4me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/97174.CEEHRC.CEMT0035.H3K4me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/97174.CEEHRC.CEMT0035.H3K4me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 a6b466c807e3613c78c32e9d087d9475 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me3 peaks track_description version=build 2020-10;Original_cell_type=Basal cells;ID=CEMT0035;disease=None;donor_id=CEMT_35-38_pool;donor_age=NA;donor_sex=Female;sample_ontology=https://purl.obolibrary.org/obo/UBERON_0000310;schema=BED3;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/CEEHRC.html;original_biosample_term_id=UBERON_0000310;is_hg38_lifted=no system_category Integumentary life_stage Adult track_name CEEHRC Basal cell ChIP-seq H3K4me3-histone-mark peaks (bed3) [Life stage: Adult] [Histone ChIP-seq peaks]
H3K4me3 • CD19+ B cell NGCEER263YIN2X • CEEHRC27863956 ChIP-seq CD19+ B cell Histone Show metadata Download track Track metadata identifier NGCEER263YIN2X data_source CEEHRC Download track Download number_of_intervals 22,953 bp_covered 22,440,081 output_type peaks genome_build hg38 cell_type CD19+ B cell biosample_type Primary cell biosample_term_id CL:0001201 tissue_category Blood encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me3 assay ChIP-seq file_format bed bed3 file_size 196,580 downloaded_date 03/12/2021 release_date 10/11/2018 date_added_to_filer 01/19/2023 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/97060.CEEHRC.CEMT0026.H3K4me3.peak_calls.bed.gz processed_file_md5 0e78a6dafc80c99e6de06e1f37c06b23 wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/97060.CEEHRC.CEMT0026.H3K4me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/97060.CEEHRC.CEMT0026.H3K4me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/97060.CEEHRC.CEMT0026.H3K4me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/97060.CEEHRC.CEMT0026.H3K4me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 18b745f559bf3e683b47ff43b010203d data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me3 peaks track_description version=build 2020-10;Original_cell_type=CD19+ cells (B lymphocytes);ID=CEMT0026;disease=Blood-Peripheral Leukemia-Chronic lymphocytic leukemia;donor_id=235-68;donor_age=79;donor_sex=Male;sample_ontology=https://purl.obolibrary.org/obo/CL_0000236;schema=BED3;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/CEEHRC.html;original_biosample_term_id=CL_0000236;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name CEEHRC CD19+ B cell ChIP-seq H3K4me3-histone-mark peaks (bed3) [Life stage: Adult] [Histone ChIP-seq peaks]
H3K4me3 • Luminal progenitor cell NGCEER3EOWN2OJ • CEEHRC27863956 ChIP-seq Luminal progenitor cell Histone Show metadata Download track Track metadata identifier NGCEER3EOWN2OJ data_source CEEHRC Download track Download number_of_intervals 34,663 bp_covered 43,542,028 output_type peaks genome_build hg38 cell_type Luminal progenitor cell biosample_type Primary cell biosample_term_id UBERON:0000310 tissue_category Female Reproductive encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me3 assay ChIP-seq file_format bed bed3 file_size 300,482 downloaded_date 03/12/2021 release_date 10/31/2019 date_added_to_filer 01/19/2023 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/99217.CEEHRC.CEMT0191.H3K4me3.peak_calls.bed.gz processed_file_md5 9009d59b9a813444f8c84a178db228a7 wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/99217.CEEHRC.CEMT0191.H3K4me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/99217.CEEHRC.CEMT0191.H3K4me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/99217.CEEHRC.CEMT0191.H3K4me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/99217.CEEHRC.CEMT0191.H3K4me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 f858c61fd28be4b0447b48d40881f970 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me3 peaks track_description version=build 2020-10;Original_cell_type=Luminal progenitor;ID=CEMT0191;disease=None;donor_id=38-18;donor_age=19;donor_sex=Female;sample_ontology=https://purl.obolibrary.org/obo/CL_0002326;schema=BED3;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/CEEHRC.html;original_biosample_term_id=CL_0002326;is_hg38_lifted=no system_category Reproductive life_stage Fetal track_name CEEHRC Luminal progenitor cell ChIP-seq H3K4me3-histone-mark peaks (bed3) [Life stage: Fetal] [Histone ChIP-seq peaks]
H3K4me3 • Large intestine NGCEER7ADTCIPE • CEEHRC27863956 ChIP-seq Large intestine Histone Show metadata Download track Track metadata identifier NGCEER7ADTCIPE data_source CEEHRC Download track Download number_of_intervals 31,131 bp_covered 23,425,959 output_type peaks genome_build hg38 cell_type Large intestine biosample_type Primary tissue biosample_term_id UBERON:0000059 tissue_category Digestive encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me3 assay ChIP-seq file_format bed bed3 file_size 260,568 downloaded_date 03/12/2021 release_date 10/11/2018 date_added_to_filer 01/19/2023 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/97945.CEEHRC.CEMT0068.H3K4me3.peak_calls.bed.gz processed_file_md5 f9d29d2e1fc23bd62788fb3777082744 wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/97945.CEEHRC.CEMT0068.H3K4me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/97945.CEEHRC.CEMT0068.H3K4me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/97945.CEEHRC.CEMT0068.H3K4me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/97945.CEEHRC.CEMT0068.H3K4me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 60f381bccd0356a42185e4bed5c0d0bd data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me3 peaks track_description version=build 2020-10;Original_cell_type=Large Intestine-Colon-Rectosigmoid;ID=CEMT0068;disease=Large Intestine Diverticulitis;donor_id=AKDIV03;donor_age=58;donor_sex=Female;sample_ontology=https://purl.obolibrary.org/obo/UBERON_0001159;schema=BED3;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/CEEHRC.html;original_biosample_term_id=UBERON_0001159;is_hg38_lifted=no system_category Digestive life_stage Adult track_name CEEHRC Large intestine ChIP-seq H3K4me3-histone-mark peaks (bed3) [Life stage: Adult] [Histone ChIP-seq peaks]
H3K4me3 • CD4+ NGCEERDELCRPBR • CEEHRC27863956 ChIP-seq CD4+ Histone Show metadata Download track Track metadata identifier NGCEERDELCRPBR data_source CEEHRC Download track Download number_of_intervals 3,636 bp_covered 1,954,253 output_type peaks genome_build hg38 cell_type CD4+ biosample_type Primary cell biosample_term_id CL:0000492 tissue_category Blood encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me3 assay ChIP-seq file_format bed bed5 file_size 47,391 downloaded_date 03/12/2021 release_date 10/19/2020 date_added_to_filer 03/06/2025 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/83184.CEEHRC.MS003001.H3K4me3.peak_calls.bed.gz processed_file_md5 8d18df4a8dc5052f4b532b0c0f1d5d5b wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/83184.CEEHRC.MS003001.H3K4me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/83184.CEEHRC.MS003001.H3K4me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/83184.CEEHRC.MS003001.H3K4me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/83184.CEEHRC.MS003001.H3K4me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 61c4b4f47154adc7adbfb1a4a27f9e8f data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me3 peaks track_description version=build 2020-10;Original_cell_type=CD4-positive helper T cell;ID=MS003001;disease=Healthy;donor_id=McGill0030;donor_age=66-71;donor_sex=Female;sample_ontology=https://purl.obolibrary.org/obo/CL_0000492;schema=BED5;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/CEEHRC.html;original_biosample_term_id=CL_0000492;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name CEEHRC CD4+ ChIP-seq H3K4me3-histone-mark peaks (bed5) [Life stage: Adult] [Histone ChIP-seq peaks]
H3K4me3 • Skeletal muscle tissue NGCEEREA2XZM3Q • CEEHRC27863956 ChIP-seq Skeletal muscle tissue Histone Show metadata Download track Track metadata identifier NGCEEREA2XZM3Q data_source CEEHRC Download track Download number_of_intervals 32,180 bp_covered 41,547,372 output_type peaks genome_build hg38 cell_type Skeletal muscle tissue biosample_type Primary tissue biosample_term_id UBERON:0001134 tissue_category Skeletal Muscle encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me3 assay ChIP-seq file_format bed bed5 file_size 433,036 downloaded_date 03/12/2021 release_date 10/19/2020 date_added_to_filer 03/06/2025 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/83288.CEEHRC.MS004701.H3K4me3.peak_calls.bed.gz processed_file_md5 dcb640e355ed2d5d266bd3177ee6de02 wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/83288.CEEHRC.MS004701.H3K4me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/83288.CEEHRC.MS004701.H3K4me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/83288.CEEHRC.MS004701.H3K4me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/83288.CEEHRC.MS004701.H3K4me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 970941bc65762cbbf04c5bd7e8d2fb6e data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me3 peaks track_description version=build 2020-10;Original_cell_type=Skeletal muscle tissue;ID=MS004701;disease=Unknown;donor_id=McGill0047;donor_age=1;donor_sex=Female;sample_ontology=https://purl.obolibrary.org/obo/UBERON_0001134;schema=BED5;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/CEEHRC.html;original_biosample_term_id=UBERON_0001134;is_hg38_lifted=no system_category Muscular life_stage Child track_name CEEHRC Skeletal muscle tissue ChIP-seq H3K4me3-histone-mark peaks (bed5) [Life stage: Child] [Histone ChIP-seq peaks]
H3K4me3 • Monocyte NGCEERFNTQOZH5 • CEEHRC27863956 ChIP-seq Monocyte Histone Show metadata Download track Track metadata identifier NGCEERFNTQOZH5 data_source CEEHRC Download track Download number_of_intervals 62,659 bp_covered 37,276,485 output_type peaks genome_build hg38 cell_type Monocyte biosample_type Primary cell biosample_term_id CL:0000576 tissue_category Blood encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me3 assay ChIP-seq file_format bed bed5 file_size 796,113 downloaded_date 03/12/2021 release_date 10/19/2020 date_added_to_filer 03/06/2025 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/83428.CEEHRC.MS010304.H3K4me3.peak_calls.bed.gz processed_file_md5 2f4873e64a5cfa8d086e3dffb984c647 wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/83428.CEEHRC.MS010304.H3K4me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/83428.CEEHRC.MS010304.H3K4me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/83428.CEEHRC.MS010304.H3K4me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/83428.CEEHRC.MS010304.H3K4me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 792bca35bda93d4a663f9ee8e6c54d52 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me3 peaks track_description version=build 2020-10;Original_cell_type=Monocyte;ID=MS010304;disease=Healthy;donor_id=McGill0103;donor_age=44-49;donor_sex=Male;sample_ontology=https://purl.obolibrary.org/obo/CL_0000576;schema=BED5;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/CEEHRC.html;original_biosample_term_id=CL_0000576;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name CEEHRC Monocyte ChIP-seq H3K4me3-histone-mark peaks (bed5) [Life stage: Adult] [Histone ChIP-seq peaks]
H3K4me3 • Skeletal muscle tissue NGCEERGMS2IYEC • CEEHRC27863956 ChIP-seq Skeletal muscle tissue Histone Show metadata Download track Track metadata identifier NGCEERGMS2IYEC data_source CEEHRC Download track Download number_of_intervals 47,560 bp_covered 44,420,265 output_type peaks genome_build hg38 cell_type Skeletal muscle tissue biosample_type Primary tissue biosample_term_id UBERON:0001134 tissue_category Skeletal Muscle encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me3 assay ChIP-seq file_format bed bed5 file_size 622,356 downloaded_date 03/12/2021 release_date 10/19/2020 date_added_to_filer 03/06/2025 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/82975.CEEHRC.MS001301.H3K4me3.peak_calls.bed.gz processed_file_md5 c5c8093283deba01bae3d5da3f90188f wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/82975.CEEHRC.MS001301.H3K4me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/82975.CEEHRC.MS001301.H3K4me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/82975.CEEHRC.MS001301.H3K4me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/82975.CEEHRC.MS001301.H3K4me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 6b55ace64b95248c7bd127292fd7fdc4 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me3 peaks track_description version=build 2020-10;Original_cell_type=Skeletal muscle tissue;ID=MS001301;disease=Leigh Disease;donor_id=McGill0013;donor_age=11;donor_sex=Male;sample_ontology=https://purl.obolibrary.org/obo/UBERON_0001134;schema=BED5;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/CEEHRC.html;original_biosample_term_id=UBERON_0001134;is_hg38_lifted=no system_category Muscular life_stage Child track_name CEEHRC Skeletal muscle tissue ChIP-seq H3K4me3-histone-mark peaks (bed5) [Life stage: Child] [Histone ChIP-seq peaks]
H3K4me3 • Basal cell NGCEERMKEJ6T5U • CEEHRC27863956 ChIP-seq Basal cell Histone Show metadata Download track Track metadata identifier NGCEERMKEJ6T5U data_source CEEHRC Download track Download number_of_intervals 65,236 bp_covered 70,976,546 output_type peaks genome_build hg38 cell_type Basal cell biosample_type Primary cell biosample_term_id CL:0000646 tissue_category Skin encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me3 assay ChIP-seq file_format bed bed3 file_size 543,578 downloaded_date 03/12/2021 release_date 11/06/2019 date_added_to_filer 01/19/2023 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/98956.CEEHRC.CEMT0181.H3K4me3.peak_calls.bed.gz processed_file_md5 12fbaabec9388aaaaa102b44f60a8c81 wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/98956.CEEHRC.CEMT0181.H3K4me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/98956.CEEHRC.CEMT0181.H3K4me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/98956.CEEHRC.CEMT0181.H3K4me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/98956.CEEHRC.CEMT0181.H3K4me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 2efae96230488f047288629161f51667 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me3 peaks track_description version=build 2020-10;Original_cell_type=Basal cells;ID=CEMT0181;disease=None;donor_id=22-18;donor_age=22;donor_sex=Female;sample_ontology=https://purl.obolibrary.org/obo/CL_0002324;schema=BED3;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/CEEHRC.html;original_biosample_term_id=CL_0002324;is_hg38_lifted=no system_category Integumentary life_stage Adult track_name CEEHRC Basal cell ChIP-seq H3K4me3-histone-mark peaks (bed3) [Life stage: Adult] [Histone ChIP-seq peaks]
H3K4me3 • Large intestine NGCEERN36MANGL • CEEHRC27863956 ChIP-seq Large intestine Histone Show metadata Download track Track metadata identifier NGCEERN36MANGL data_source CEEHRC Download track Download number_of_intervals 23,215 bp_covered 35,586,742 output_type peaks genome_build hg38 cell_type Large intestine biosample_type Primary tissue biosample_term_id UBERON:0000059 tissue_category Digestive encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me3 assay ChIP-seq file_format bed bed3 file_size 204,203 downloaded_date 03/12/2021 release_date 10/11/2018 date_added_to_filer 01/19/2023 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/97790.CEEHRC.CEMT0067.H3K4me3.peak_calls.bed.gz processed_file_md5 bffe6e0a8d232c03a58257ad00bb4705 wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/97790.CEEHRC.CEMT0067.H3K4me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/97790.CEEHRC.CEMT0067.H3K4me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/97790.CEEHRC.CEMT0067.H3K4me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/97790.CEEHRC.CEMT0067.H3K4me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 5cc7e4fe8e0f0bdb4a6203f2023a727e data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me3 peaks track_description version=build 2020-10;Original_cell_type=Large Intestine-Colon-Ascending (Right);ID=CEMT0067;disease=Large Intestine-Colon Adenocarcinoma;donor_id=AKCC55;donor_age=77;donor_sex=Male;sample_ontology=https://purl.obolibrary.org/obo/UBERON_0001156;schema=BED3;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/CEEHRC.html;original_biosample_term_id=UBERON_0001156;is_hg38_lifted=no system_category Digestive life_stage Adult track_name CEEHRC Large intestine ChIP-seq H3K4me3-histone-mark peaks (bed3) [Life stage: Adult] [Histone ChIP-seq peaks]
H3K4me3 • Thyroid NGCEERXMF7A3H3 • CEEHRC27863956 ChIP-seq Thyroid Histone Show metadata Download track Track metadata identifier NGCEERXMF7A3H3 data_source CEEHRC Download track Download number_of_intervals 27,097 bp_covered 27,217,715 output_type peaks genome_build hg38 cell_type Thyroid biosample_type Primary tissue biosample_term_id UBERON:0002046 tissue_category Endocrine encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me3 assay ChIP-seq file_format bed bed3 file_size 233,834 downloaded_date 03/12/2021 release_date 10/11/2018 date_added_to_filer 01/19/2023 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/97986.CEEHRC.CEMT0086.H3K4me3.peak_calls.bed.gz processed_file_md5 a54f41ba5271ac77cd3b56402123641a wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/97986.CEEHRC.CEMT0086.H3K4me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/97986.CEEHRC.CEMT0086.H3K4me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/97986.CEEHRC.CEMT0086.H3K4me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/97986.CEEHRC.CEMT0086.H3K4me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 52d0d332e662ab1a8bccab6c4f1b695c data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me3 peaks track_description version=build 2020-10;Original_cell_type=Thyroid;ID=CEMT0086;disease=None;donor_id=SW-TTP-141;donor_age=44;donor_sex=Female;sample_ontology=https://purl.obolibrary.org/obo/UBERON_0002046;schema=BED3;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/CEEHRC.html;original_biosample_term_id=UBERON_0002046;is_hg38_lifted=no system_category Endocrine life_stage Adult track_name CEEHRC Thyroid ChIP-seq H3K4me3-histone-mark peaks (bed3) [Life stage: Adult] [Histone ChIP-seq peaks]
H3K4me3 • CD4+ naive NGCEESDZMP3CT4 • CEEHRC27863956 ChIP-seq CD4+ naive Histone Show metadata Download track Track metadata identifier NGCEESDZMP3CT4 data_source CEEHRC Download track Download number_of_intervals 34,688 bp_covered 56,808,698 output_type peaks genome_build hg38 cell_type CD4+ naive biosample_type Primary cell biosample_term_id CL:0000895 tissue_category Blood encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me3 assay ChIP-seq file_format bed bed3 file_size 297,626 downloaded_date 03/12/2021 release_date 10/12/2018 date_added_to_filer 01/19/2023 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/98783.CEEHRC.CEMT0152.H3K4me3.peak_calls.bed.gz processed_file_md5 2ec7ed4f3233489c664da9c8bb4d9afe wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/98783.CEEHRC.CEMT0152.H3K4me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/98783.CEEHRC.CEMT0152.H3K4me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/98783.CEEHRC.CEMT0152.H3K4me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/98783.CEEHRC.CEMT0152.H3K4me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 35f27da1312b2faf49070bc2548f7946 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me3 peaks track_description version=build 2020-10;Original_cell_type=CD4 Naive;ID=CEMT0152;disease=None;donor_id=000A3;donor_age=20-40;donor_sex=Female;sample_ontology=https://purl.obolibrary.org/obo/UBERON_0010393;schema=BED3;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/CEEHRC.html;original_biosample_term_id=UBERON_0010393;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name CEEHRC CD4+ naive ChIP-seq H3K4me3-histone-mark peaks (bed3) [Life stage: Adult] [Histone ChIP-seq peaks]
H3K4me3 • Amygdala NGCEESDZP5LOQ4 • CEEHRC27863956 ChIP-seq Amygdala Histone Show metadata Download track Track metadata identifier NGCEESDZP5LOQ4 data_source CEEHRC Download track Download number_of_intervals 57,807 bp_covered 59,460,511 output_type peaks genome_build hg38 cell_type Amygdala biosample_type Primary tissue biosample_term_id UBERON:0001876 tissue_category Brain encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me3 assay ChIP-seq file_format bed bed5 file_size 784,012 downloaded_date 03/12/2021 release_date 10/19/2020 date_added_to_filer 03/06/2025 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/84600.CEEHRC.MS048101.H3K4me3.peak_calls.bed.gz processed_file_md5 0bea93d895ee16e0301132ee1725beaa wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/84600.CEEHRC.MS048101.H3K4me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/84600.CEEHRC.MS048101.H3K4me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/84600.CEEHRC.MS048101.H3K4me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/84600.CEEHRC.MS048101.H3K4me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 6ccaded8d9396d5907a94f95872e9a6a data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me3 peaks track_description version=build 2020-10;Original_cell_type=Amygdala;ID=MS048101;disease=Unknown;donor_id=McGill0481;donor_age=NA;donor_sex=Unknown;sample_ontology=https://purl.obolibrary.org/obo/UBERON_0001876;schema=BED5;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/CEEHRC.html;original_biosample_term_id=UBERON_0001876;is_hg38_lifted=no system_category Nervous life_stage Unknown track_name CEEHRC Amygdala ChIP-seq H3K4me3-histone-mark peaks (bed5) [Histone ChIP-seq peaks]
H3K4me3 • Stromal cell NGCEESNFPBA76H • CEEHRC27863956 ChIP-seq Stromal cell Histone Show metadata Download track Track metadata identifier NGCEESNFPBA76H data_source CEEHRC Download track Download number_of_intervals 24,974 bp_covered 33,915,656 output_type peaks genome_build hg38 cell_type Stromal cell biosample_type Primary cell biosample_term_id CL:0000499 tissue_category Connective Tissue encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me3 assay ChIP-seq file_format bed bed3 file_size 214,892 downloaded_date 03/12/2021 release_date 10/11/2018 date_added_to_filer 01/19/2023 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/97193.CEEHRC.CEMT0036.H3K4me3.peak_calls.bed.gz processed_file_md5 98f11badf13aa6e6032ca684a6389d5f wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/97193.CEEHRC.CEMT0036.H3K4me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/97193.CEEHRC.CEMT0036.H3K4me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/97193.CEEHRC.CEMT0036.H3K4me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/97193.CEEHRC.CEMT0036.H3K4me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 3910f2dc3d6b8314620af3368b4e6a00 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me3 peaks track_description version=build 2020-10;Original_cell_type=Stromal cells;ID=CEMT0036;disease=None;donor_id=CEMT_35-38_pool;donor_age=NA;donor_sex=Female;sample_ontology=https://purl.obolibrary.org/obo/UBERON_0000310;schema=BED3;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/CEEHRC.html;original_biosample_term_id=UBERON_0000310;is_hg38_lifted=no system_category Skeletal life_stage Adult track_name CEEHRC Stromal cell ChIP-seq H3K4me3-histone-mark peaks (bed3) [Life stage: Adult] [Histone ChIP-seq peaks]