CD8+ T cell NGADBXROFIU6Y2 • ATACdb v1.03 ATAC-seq CD8+ T cell Accessible chromatin Show metadata identifier NGADBXROFIU6Y2 data_source ATACdb_v1.03 Download track Download number_of_intervals 42,789 bp_covered 30,356,314 output_type accessible chromatin region genome_build hg38 cell_type CD8+ T cell biosample_type Not applicable biosample_term_id CL:0001050 tissue_category Blood encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody Not applicable assay ATAC-seq file_format bed narrowPeak-lifted file_size 1,459,052 downloaded_date 10/03/2023 release_date 10/18/2021 date_added_to_filer 05/20/2026 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Accessible-chromatin-region/bed13/hg38/Sample_0206_accessible_chromatin_regions_hg38.bed.gz processed_file_md5 798caf79a683432acb1a1a70b7cc561d wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Accessible-chromatin-region/bed13/hg38/Sample_0206_accessible_chromatin_regions_hg38.bed.gz -P FILER2/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Accessible-chromatin-region/bed13/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Accessible-chromatin-region/bed13/hg38/Sample_0206_accessible_chromatin_regions_hg38.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Accessible-chromatin-region/bed13/hg38/ link_out_url https://bio.liclab.net/ATACdb/ raw_file_url https://bio.liclab.net/ATACdb/download/download_car_bed/Sample_0206.bed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ATACdb/Accessible_chromatin_regions/Sample_0206.bed -P FILER2/Annotationtracks/Downloads/ATACdb/Accessible_chromatin_regions/ raw_file_md5 1369ccd9a24e37f4cd2c3cad1f70a814 data_category Accessible chromatin Genomic feature type ATAC-seq accessible chromatin region track_description version=v1.03;Sample_ID=Sample_0206;Biosample_Type=Other;Tissue_Type=Blood;Biosample_Name=CD8pos_T;Cancer_Type=Normal;Region_Number=42890;Length=30410.528 kb;GEO_SRA=SRR7650736;schema=BED3+10;dataSource_pubmed_id=33125076;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/F system_category Cardiovascular life_stage Unknown track_name ATACdb_v1.03 CD8+ T cell ATAC-seq accessible chromatin region (narrowPeak-lifted) [Accessible chromatin]
Lymphoblast NGADBXS22F2W5H • ATACdb v1.03 ATAC-seq Lymphoblast Accessible chromatin Show metadata identifier NGADBXS22F2W5H data_source ATACdb_v1.03 Download track Download number_of_intervals 9,912 bp_covered 4,227,038 output_type accessible chromatin region genome_build hg38 cell_type Lymphoblast biosample_type Cell line biosample_term_id CL:0017005 tissue_category Blood encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody Not applicable assay ATAC-seq file_format bed narrowPeak-lifted file_size 319,229 downloaded_date 10/03/2023 release_date 10/18/2021 date_added_to_filer 05/20/2026 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Accessible-chromatin-region/bed13/hg38/Sample_0737_accessible_chromatin_regions_hg38.bed.gz processed_file_md5 a5b49b37390fd234cec05d018b704e58 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Accessible-chromatin-region/bed13/hg38/Sample_0737_accessible_chromatin_regions_hg38.bed.gz -P FILER2/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Accessible-chromatin-region/bed13/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Accessible-chromatin-region/bed13/hg38/Sample_0737_accessible_chromatin_regions_hg38.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Accessible-chromatin-region/bed13/hg38/ link_out_url https://bio.liclab.net/ATACdb/ raw_file_url https://bio.liclab.net/ATACdb/download/download_car_bed/Sample_0737.bed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ATACdb/Accessible_chromatin_regions/Sample_0737.bed -P FILER2/Annotationtracks/Downloads/ATACdb/Accessible_chromatin_regions/ raw_file_md5 2902fabe9351c06ecc8961477ce121cd data_category Accessible chromatin Genomic feature type ATAC-seq accessible chromatin region track_description version=v1.03;Sample_ID=Sample_0737;Biosample_Type=Cell Line;Tissue_Type=Blood;Biosample_Name=Lymphoblast;Cancer_Type=Cultured cancer;Region_Number=9934;Length=4238.385 kb;GEO_SRA=SRR6288282;schema=BED3+10;dataSource_pubmed_id=33125076;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwang system_category Cardiovascular life_stage Unknown track_name ATACdb_v1.03 Lymphoblast ATAC-seq accessible chromatin region (narrowPeak-lifted) [Accessible chromatin]
Natural killer cell NGADBXS5YJTYQ5 • ATACdb v1.03 ATAC-seq Natural killer cell Accessible chromatin Show metadata identifier NGADBXS5YJTYQ5 data_source ATACdb_v1.03 Download track Download number_of_intervals 1,090 bp_covered 1,053,464 output_type accessible chromatin region genome_build hg38 cell_type Natural killer cell biosample_type Primary cell biosample_term_id CL:0000623 tissue_category Blood encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody Not applicable assay ATAC-seq file_format bed narrowPeak-lifted file_size 37,408 downloaded_date 10/03/2023 release_date 10/18/2021 date_added_to_filer 05/20/2026 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Accessible-chromatin-region/bed13/hg38/Sample_1189_accessible_chromatin_regions_hg38.bed.gz processed_file_md5 c66ee6853baab2cac98c2b97238f54c3 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Accessible-chromatin-region/bed13/hg38/Sample_1189_accessible_chromatin_regions_hg38.bed.gz -P FILER2/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Accessible-chromatin-region/bed13/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Accessible-chromatin-region/bed13/hg38/Sample_1189_accessible_chromatin_regions_hg38.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Accessible-chromatin-region/bed13/hg38/ link_out_url https://bio.liclab.net/ATACdb/ raw_file_url https://bio.liclab.net/ATACdb/download/download_car_bed/Sample_1189.bed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ATACdb/Accessible_chromatin_regions/Sample_1189.bed -P FILER2/Annotationtracks/Downloads/ATACdb/Accessible_chromatin_regions/ raw_file_md5 7fad0f366f03cb8e9a4831160c91024c data_category Accessible chromatin Genomic feature type ATAC-seq accessible chromatin region track_description version=v1.03;Sample_ID=Sample_1189;Biosample_Type=Primary Cell;Tissue_Type=Blood;Biosample_Name=Natural Killer Cell;Cancer_Type=Normal;Region_Number=1131;Length=1071.427 kb;GEO_SRA=SRR3129116;schema=BED3+10;dataSource_pubmed_id=33125076;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwa system_category Cardiovascular life_stage Unknown track_name ATACdb_v1.03 Natural killer cell ATAC-seq accessible chromatin region (narrowPeak-lifted) [Accessible chromatin]
B cell NGADBXSJMI2J2E • ATACdb v1.03 ATAC-seq B cell TFBS Show metadata identifier NGADBXSJMI2J2E data_source ATACdb_v1.03 Download track Download number_of_intervals 171,959 bp_covered 2,326,968 output_type transcription factor binding sites genome_build hg38 cell_type B cell biosample_type Not applicable biosample_term_id CL:0000236 tissue_category Blood encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody Not applicable assay ATAC-seq file_format bed bed3+11 ATACdb-lifted file_size 5,730,080 downloaded_date 10/03/2023 release_date 10/18/2021 date_added_to_filer 05/20/2026 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Motif-overlap/bed14/hg38/Sample_0282_hg38_motif_binding_sites.bed.gz processed_file_md5 2c081ae5f690d925328160dd334d6b35 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Motif-overlap/bed14/hg38/Sample_0282_hg38_motif_binding_sites.bed.gz -P FILER2/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Motif-overlap/bed14/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Motif-overlap/bed14/hg38/Sample_0282_hg38_motif_binding_sites.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Motif-overlap/bed14/hg38/ link_out_url https://bio.liclab.net/ATACdb/ raw_file_url https://bio.liclab.net/ATACdb/download/packages/Motif_scan_package.txt raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ATACdb/motif_scan/Motif_scan_package.txt -P FILER2/Annotationtracks/Downloads/ATACdb/motif_scan/ raw_file_md5 b279988d9f061984cc7e422702286f7d data_category TFBS [Transcription Factor Binding Site] Genomic feature type ATAC-seq transcription factor binding sites track_description version=v1.03;Sample_ID=Sample_0282;Biosample_Type=Other;Tissue_Type=Blood;Biosample_Name=Bulk_B;Cancer_Type=Normal;Region_Number=41851;Length=20735.405 kb;GEO_SRA=SRR7650813;schema=BED3+11;dataSource_pubmed_id=33125076;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FIL system_category Cardiovascular life_stage Unknown track_name ATACdb_v1.03 B cell ATAC-seq transcription factor binding sites (bed3+11 ATACdb-lifted) [TFBS]
hPGCLCs NGADBXSUIIUO3P • ATACdb v1.03 ATAC-seq hPGCLCs Accessible chromatin Show metadata identifier NGADBXSUIIUO3P data_source ATACdb_v1.03 Download track Download number_of_intervals 92,766 bp_covered 52,176,680 output_type accessible chromatin region genome_build hg38 cell_type hPGCLCs biosample_type Stem cell biosample_term_id CL:0000670 tissue_category Embryo encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody Not applicable assay ATAC-seq file_format bed narrowPeak-lifted file_size 2,930,951 downloaded_date 10/03/2023 release_date 10/18/2021 date_added_to_filer 05/20/2026 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Accessible-chromatin-region/bed13/hg38/Sample_0012_accessible_chromatin_regions_hg38.bed.gz processed_file_md5 47054912962fe82da4bbc9939d385d14 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Accessible-chromatin-region/bed13/hg38/Sample_0012_accessible_chromatin_regions_hg38.bed.gz -P FILER2/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Accessible-chromatin-region/bed13/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Accessible-chromatin-region/bed13/hg38/Sample_0012_accessible_chromatin_regions_hg38.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Accessible-chromatin-region/bed13/hg38/ link_out_url https://bio.liclab.net/ATACdb/ raw_file_url https://bio.liclab.net/ATACdb/download/download_car_bed/Sample_0012.bed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ATACdb/Accessible_chromatin_regions/Sample_0012.bed -P FILER2/Annotationtracks/Downloads/ATACdb/Accessible_chromatin_regions/ raw_file_md5 f1065a95a5726ac47da970f27dbe0213 data_category Accessible chromatin Genomic feature type ATAC-seq accessible chromatin region track_description version=v1.03;Sample_ID=Sample_0012;Biosample_Type=Stem Cell;Tissue_Type=Embryo;Biosample_Name=hPGCLCs induced from primed UCLA1 hESCs;Cancer_Type=Normal;Region_Number=92904;Length=52232.038 kb;GEO_SRA=SRR7942733;schema=BED3+10;dataSource_pubmed_id=33125076;in_trackHub=yes;dataSource_acknowledgement system_category Embryo life_stage Embryonic track_name ATACdb_v1.03 hPGCLCs ATAC-seq accessible chromatin region (narrowPeak-lifted) [Life stage: Embryonic] [Accessible chromatin]
T98G NGADBXT3GXWSBE • ATACdb v1.03 ATAC-seq T98G Accessible chromatin Show metadata identifier NGADBXT3GXWSBE data_source ATACdb_v1.03 Download track Download number_of_intervals 11,611 bp_covered 7,890,782 output_type accessible chromatin region genome_build hg38 cell_type T98G biosample_type Cell line biosample_term_id EFO:0002085 tissue_category Brain encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody Not applicable assay ATAC-seq file_format bed narrowPeak-lifted file_size 387,381 downloaded_date 10/03/2023 release_date 10/18/2021 date_added_to_filer 05/20/2026 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Accessible-chromatin-region/bed13/hg38/Sample_0369_accessible_chromatin_regions_hg38.bed.gz processed_file_md5 e667039a6df7396b6d00afc1b5cd9c5a wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Accessible-chromatin-region/bed13/hg38/Sample_0369_accessible_chromatin_regions_hg38.bed.gz -P FILER2/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Accessible-chromatin-region/bed13/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Accessible-chromatin-region/bed13/hg38/Sample_0369_accessible_chromatin_regions_hg38.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Accessible-chromatin-region/bed13/hg38/ link_out_url https://bio.liclab.net/ATACdb/ raw_file_url https://bio.liclab.net/ATACdb/download/download_car_bed/Sample_0369.bed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ATACdb/Accessible_chromatin_regions/Sample_0369.bed -P FILER2/Annotationtracks/Downloads/ATACdb/Accessible_chromatin_regions/ raw_file_md5 1b4d92bd093d6cb91a129a7c6ebc3eb7 data_category Accessible chromatin Genomic feature type ATAC-seq accessible chromatin region track_description version=v1.03;Sample_ID=Sample_0369;Biosample_Type=Cell Line;Tissue_Type=Other;Biosample_Name=T98G;Cancer_Type=Glioblastoma;Region_Number=11664;Length=7906.161 kb;GEO_SRA=SRR6251846;schema=BED3+10;dataSource_pubmed_id=33125076;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/G system_category Nervous life_stage Unknown track_name ATACdb_v1.03 T98G ATAC-seq accessible chromatin region (narrowPeak-lifted) [Accessible chromatin]
Adipose NGADBXTEGLBF2F • ATACdb v1.03 ATAC-seq Adipose TFBS Show metadata identifier NGADBXTEGLBF2F data_source ATACdb_v1.03 Download track Download number_of_intervals 80,264 bp_covered 1,065,006 output_type transcription factor binding sites genome_build hg38 cell_type Adipose biosample_type Tissue biosample_term_id NCIT:C12472 tissue_category Adipose encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody Not applicable assay ATAC-seq file_format bed bed3+11 ATACdb-lifted file_size 2,449,541 downloaded_date 10/03/2023 release_date 10/18/2021 date_added_to_filer 05/20/2026 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Motif-overlap/bed14/hg38/Sample_1445_hg38_motif_binding_sites.bed.gz processed_file_md5 cd25db464ce50c30efc4d62aafc56d4d wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Motif-overlap/bed14/hg38/Sample_1445_hg38_motif_binding_sites.bed.gz -P FILER2/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Motif-overlap/bed14/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Motif-overlap/bed14/hg38/Sample_1445_hg38_motif_binding_sites.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Motif-overlap/bed14/hg38/ link_out_url https://bio.liclab.net/ATACdb/ raw_file_url https://bio.liclab.net/ATACdb/download/packages/Motif_scan_package.txt raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ATACdb/motif_scan/Motif_scan_package.txt -P FILER2/Annotationtracks/Downloads/ATACdb/motif_scan/ raw_file_md5 b279988d9f061984cc7e422702286f7d data_category TFBS [Transcription Factor Binding Site] Genomic feature type ATAC-seq transcription factor binding sites track_description version=v1.03;Sample_ID=Sample_1445;Biosample_Type=Tissue;Tissue_Type=Adipose;Biosample_Name=Adipose;Cancer_Type=Other;Region_Number=13687;Length=7682.488 kb;GEO_SRA=SRR8255928;schema=BED3+11;dataSource_pubmed_id=33125076;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/F system_category Integumentary life_stage Unknown track_name ATACdb_v1.03 Adipose ATAC-seq transcription factor binding sites (bed3+11 ATACdb-lifted) [TFBS]
YB5 NGADBXUKJQGX62 • ATACdb v1.03 ATAC-seq YB5 TFBS Show metadata identifier NGADBXUKJQGX62 data_source ATACdb_v1.03 Download track Download number_of_intervals 10,788 bp_covered 141,569 output_type transcription factor binding sites genome_build hg38 cell_type YB5 biosample_type Cell line biosample_term_id Not available tissue_category Digestive encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody Not applicable assay ATAC-seq file_format bed bed3+11 ATACdb-lifted file_size 331,226 downloaded_date 10/03/2023 release_date 10/18/2021 date_added_to_filer 05/20/2026 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Motif-overlap/bed14/hg38/Sample_0157_hg38_motif_binding_sites.bed.gz processed_file_md5 5eea199a9d47891526c1536aa3ba7b9b wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Motif-overlap/bed14/hg38/Sample_0157_hg38_motif_binding_sites.bed.gz -P FILER2/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Motif-overlap/bed14/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Motif-overlap/bed14/hg38/Sample_0157_hg38_motif_binding_sites.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Motif-overlap/bed14/hg38/ link_out_url https://bio.liclab.net/ATACdb/ raw_file_url https://bio.liclab.net/ATACdb/download/packages/Motif_scan_package.txt raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ATACdb/motif_scan/Motif_scan_package.txt -P FILER2/Annotationtracks/Downloads/ATACdb/motif_scan/ raw_file_md5 b279988d9f061984cc7e422702286f7d data_category TFBS [Transcription Factor Binding Site] Genomic feature type ATAC-seq transcription factor binding sites track_description version=v1.03;Sample_ID=Sample_0157;Biosample_Type=Cell Line;Tissue_Type=Colon;Biosample_Name=YB5;Cancer_Type=Colon cancer;Region_Number=2141;Length=815.665 kb;GEO_SRA=SRR7060333;schema=BED3+11;dataSource_pubmed_id=33125076;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB system_category Digestive life_stage Unknown track_name ATACdb_v1.03 YB5 ATAC-seq transcription factor binding sites (bed3+11 ATACdb-lifted) [TFBS]
CD8+ T cell NGADBXVCINLHPX • ATACdb v1.03 ATAC-seq CD8+ T cell TFBS Show metadata identifier NGADBXVCINLHPX data_source ATACdb_v1.03 Download track Download number_of_intervals 183,809 bp_covered 2,493,713 output_type transcription factor binding sites genome_build hg38 cell_type CD8+ T cell biosample_type Primary cell biosample_term_id CL:0001050 tissue_category Blood encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody Not applicable assay ATAC-seq file_format bed bed3+11 ATACdb-lifted file_size 6,049,073 downloaded_date 10/03/2023 release_date 10/18/2021 date_added_to_filer 05/20/2026 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Motif-overlap/bed14/hg38/Sample_1021_hg38_motif_binding_sites.bed.gz processed_file_md5 df6f416a44224c449d27e339b4bd7092 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Motif-overlap/bed14/hg38/Sample_1021_hg38_motif_binding_sites.bed.gz -P FILER2/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Motif-overlap/bed14/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Motif-overlap/bed14/hg38/Sample_1021_hg38_motif_binding_sites.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Motif-overlap/bed14/hg38/ link_out_url https://bio.liclab.net/ATACdb/ raw_file_url https://bio.liclab.net/ATACdb/download/packages/Motif_scan_package.txt raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ATACdb/motif_scan/Motif_scan_package.txt -P FILER2/Annotationtracks/Downloads/ATACdb/motif_scan/ raw_file_md5 b279988d9f061984cc7e422702286f7d data_category TFBS [Transcription Factor Binding Site] Genomic feature type ATAC-seq transcription factor binding sites track_description version=v1.03;Sample_ID=Sample_1021;Biosample_Type=Primary Cell;Tissue_Type=Blood;Biosample_Name=CD8 T cell;Cancer_Type=Normal;Region_Number=34992;Length=24218.628 kb;GEO_SRA=SRR4568591;schema=BED3+11;dataSource_pubmed_id=33125076;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.o system_category Cardiovascular life_stage Unknown track_name ATACdb_v1.03 CD8+ T cell ATAC-seq transcription factor binding sites (bed3+11 ATACdb-lifted) [TFBS]
hESC NGADBXVDOPJN6W • ATACdb v1.03 ATAC-seq hESC TFBS Show metadata identifier NGADBXVDOPJN6W data_source ATACdb_v1.03 Download track Download number_of_intervals 163,561 bp_covered 2,170,497 output_type transcription factor binding sites genome_build hg38 cell_type hESC biosample_type Cell line biosample_term_id CL:0002322 tissue_category Stem Cell encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody Not applicable assay ATAC-seq file_format bed bed3+11 ATACdb-lifted file_size 5,193,764 downloaded_date 10/03/2023 release_date 10/18/2021 date_added_to_filer 05/20/2026 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Motif-overlap/bed14/hg38/Sample_1388_hg38_motif_binding_sites.bed.gz processed_file_md5 f494e07c9d3c59c137a19b8c2a36903b wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Motif-overlap/bed14/hg38/Sample_1388_hg38_motif_binding_sites.bed.gz -P FILER2/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Motif-overlap/bed14/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Motif-overlap/bed14/hg38/Sample_1388_hg38_motif_binding_sites.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Motif-overlap/bed14/hg38/ link_out_url https://bio.liclab.net/ATACdb/ raw_file_url https://bio.liclab.net/ATACdb/download/packages/Motif_scan_package.txt raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ATACdb/motif_scan/Motif_scan_package.txt -P FILER2/Annotationtracks/Downloads/ATACdb/motif_scan/ raw_file_md5 b279988d9f061984cc7e422702286f7d data_category TFBS [Transcription Factor Binding Site] Genomic feature type ATAC-seq transcription factor binding sites track_description version=v1.03;Sample_ID=Sample_1388;Biosample_Type=Cell Line;Tissue_Type=Embryo;Biosample_Name=HESC;Cancer_Type=Normal;Region_Number=37576;Length=18459.095 kb;GEO_SRA=SRR6387576;schema=BED3+11;dataSource_pubmed_id=33125076;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/ system_category Stem Cell life_stage Embryonic track_name ATACdb_v1.03 hESC ATAC-seq transcription factor binding sites (bed3+11 ATACdb-lifted) [Life stage: Embryonic] [TFBS]
Naive T effector cell NGADBXVECGNKFC • ATACdb v1.03 ATAC-seq Naive T effector cell TFBS Show metadata identifier NGADBXVECGNKFC data_source ATACdb_v1.03 Download track Download number_of_intervals 167,717 bp_covered 2,256,049 output_type transcription factor binding sites genome_build hg38 cell_type Naive T effector cell biosample_type Not applicable biosample_term_id Not available tissue_category Blood encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody Not applicable assay ATAC-seq file_format bed bed3+11 ATACdb-lifted file_size 5,468,169 downloaded_date 10/03/2023 release_date 10/18/2021 date_added_to_filer 05/20/2026 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Motif-overlap/bed14/hg38/Sample_0339_hg38_motif_binding_sites.bed.gz processed_file_md5 138e3594aec2dfffef66706656212bb1 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Motif-overlap/bed14/hg38/Sample_0339_hg38_motif_binding_sites.bed.gz -P FILER2/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Motif-overlap/bed14/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Motif-overlap/bed14/hg38/Sample_0339_hg38_motif_binding_sites.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Motif-overlap/bed14/hg38/ link_out_url https://bio.liclab.net/ATACdb/ raw_file_url https://bio.liclab.net/ATACdb/download/packages/Motif_scan_package.txt raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ATACdb/motif_scan/Motif_scan_package.txt -P FILER2/Annotationtracks/Downloads/ATACdb/motif_scan/ raw_file_md5 b279988d9f061984cc7e422702286f7d data_category TFBS [Transcription Factor Binding Site] Genomic feature type ATAC-seq transcription factor binding sites track_description version=v1.03;Sample_ID=Sample_0339;Biosample_Type=Other;Tissue_Type=Blood;Biosample_Name=Naive_Teffs;Cancer_Type=Normal;Region_Number=39738;Length=20420.736 kb;GEO_SRA=SRR7650871;schema=BED3+11;dataSource_pubmed_id=33125076;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GAD system_category Cardiovascular life_stage Unknown track_name ATACdb_v1.03 Naive T effector cell ATAC-seq transcription factor binding sites (bed3+11 ATACdb-lifted) [TFBS]
HCT116 NGADBXW3U74QC2 • ATACdb v1.03 ATAC-seq HCT116 TFBS Show metadata identifier NGADBXW3U74QC2 data_source ATACdb_v1.03 Download track Download number_of_intervals 105,130 bp_covered 1,418,363 output_type transcription factor binding sites genome_build hg38 cell_type HCT116 biosample_type Cell line biosample_term_id EFO:0002824 tissue_category Digestive encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody Not applicable assay ATAC-seq file_format bed bed3+11 ATACdb-lifted file_size 3,582,014 downloaded_date 10/03/2023 release_date 10/18/2021 date_added_to_filer 05/20/2026 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Motif-overlap/bed14/hg38/Sample_0878_hg38_motif_binding_sites.bed.gz processed_file_md5 b610cb2d1006a49c6fd1e907b434e258 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Motif-overlap/bed14/hg38/Sample_0878_hg38_motif_binding_sites.bed.gz -P FILER2/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Motif-overlap/bed14/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Motif-overlap/bed14/hg38/Sample_0878_hg38_motif_binding_sites.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Motif-overlap/bed14/hg38/ link_out_url https://bio.liclab.net/ATACdb/ raw_file_url https://bio.liclab.net/ATACdb/download/packages/Motif_scan_package.txt raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ATACdb/motif_scan/Motif_scan_package.txt -P FILER2/Annotationtracks/Downloads/ATACdb/motif_scan/ raw_file_md5 b279988d9f061984cc7e422702286f7d data_category TFBS [Transcription Factor Binding Site] Genomic feature type ATAC-seq transcription factor binding sites track_description version=v1.03;Sample_ID=Sample_0878;Biosample_Type=Cell Line;Tissue_Type=Colon;Biosample_Name=HCT116;Cancer_Type=Colorectal carcinoma;Region_Number=28723;Length=12069.714 kb;GEO_SRA=SRR5876161;schema=BED3+11;dataSource_pubmed_id=33125076;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwa system_category Digestive life_stage Unknown track_name ATACdb_v1.03 HCT116 ATAC-seq transcription factor binding sites (bed3+11 ATACdb-lifted) [TFBS]
Plasmacytoid dendritic cell NGADBXWS42MWLE • ATACdb v1.03 ATAC-seq Plasmacytoid dendritic cell TFBS Show metadata identifier NGADBXWS42MWLE data_source ATACdb_v1.03 Download track Download number_of_intervals 204,551 bp_covered 2,784,903 output_type transcription factor binding sites genome_build hg38 cell_type Plasmacytoid dendritic cell biosample_type Primary cell biosample_term_id CL:0000784 tissue_category Bone encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody Not applicable assay ATAC-seq file_format bed bed3+11 ATACdb-lifted file_size 7,146,546 downloaded_date 10/03/2023 release_date 10/18/2021 date_added_to_filer 05/20/2026 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Motif-overlap/bed14/hg38/Sample_0622_hg38_motif_binding_sites.bed.gz processed_file_md5 18fe4bf0707c28738620f3e9b71c7b29 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Motif-overlap/bed14/hg38/Sample_0622_hg38_motif_binding_sites.bed.gz -P FILER2/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Motif-overlap/bed14/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Motif-overlap/bed14/hg38/Sample_0622_hg38_motif_binding_sites.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Motif-overlap/bed14/hg38/ link_out_url https://bio.liclab.net/ATACdb/ raw_file_url https://bio.liclab.net/ATACdb/download/packages/Motif_scan_package.txt raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ATACdb/motif_scan/Motif_scan_package.txt -P FILER2/Annotationtracks/Downloads/ATACdb/motif_scan/ raw_file_md5 b279988d9f061984cc7e422702286f7d data_category TFBS [Transcription Factor Binding Site] Genomic feature type ATAC-seq transcription factor binding sites track_description version=v1.03;Sample_ID=Sample_0622;Biosample_Type=Primary Cell;Tissue_Type=Bone marrow;Biosample_Name=pDC;Cancer_Type=Normal;Region_Number=60318;Length=28702.305 kb;GEO_SRA=SRR5356160;schema=BED3+11;dataSource_pubmed_id=33125076;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.or system_category Skeletal life_stage Unknown track_name ATACdb_v1.03 Plasmacytoid dendritic cell ATAC-seq transcription factor binding sites (bed3+11 ATACdb-lifted) [TFBS]
HeLa NGADBXX77SABGE • ATACdb v1.03 ATAC-seq HeLa Accessible chromatin Show metadata identifier NGADBXX77SABGE data_source ATACdb_v1.03 Download track Download number_of_intervals 15,545 bp_covered 4,712,570 output_type accessible chromatin region genome_build hg38 cell_type HeLa biosample_type Cell line biosample_term_id EFO:0001185 tissue_category Female Reproductive encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody Not applicable assay ATAC-seq file_format bed narrowPeak-lifted file_size 505,595 downloaded_date 10/03/2023 release_date 10/18/2021 date_added_to_filer 05/20/2026 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Accessible-chromatin-region/bed13/hg38/Sample_0162_accessible_chromatin_regions_hg38.bed.gz processed_file_md5 e8b67a1ba1964babd3fbe7400fbb95e7 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Accessible-chromatin-region/bed13/hg38/Sample_0162_accessible_chromatin_regions_hg38.bed.gz -P FILER2/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Accessible-chromatin-region/bed13/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Accessible-chromatin-region/bed13/hg38/Sample_0162_accessible_chromatin_regions_hg38.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Accessible-chromatin-region/bed13/hg38/ link_out_url https://bio.liclab.net/ATACdb/ raw_file_url https://bio.liclab.net/ATACdb/download/download_car_bed/Sample_0162.bed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ATACdb/Accessible_chromatin_regions/Sample_0162.bed -P FILER2/Annotationtracks/Downloads/ATACdb/Accessible_chromatin_regions/ raw_file_md5 2804fb668c9718cb33e0b9350a29f6e6 data_category Accessible chromatin Genomic feature type ATAC-seq accessible chromatin region track_description version=v1.03;Sample_ID=Sample_0162;Biosample_Type=Cell Line;Tissue_Type=Cervix;Biosample_Name=HeLa;Cancer_Type=Cervix adenocarcinoma;Region_Number=15596;Length=4732.375 kb;GEO_SRA=SRR8102132;schema=BED3+10;dataSource_pubmed_id=33125076;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwan system_category Reproductive life_stage Unknown track_name ATACdb_v1.03 HeLa ATAC-seq accessible chromatin region (narrowPeak-lifted) [Accessible chromatin]
T-helper 1 cell NGADBXXARW7GVB • ATACdb v1.03 ATAC-seq T-helper 1 cell Accessible chromatin Show metadata identifier NGADBXXARW7GVB data_source ATACdb_v1.03 Download track Download number_of_intervals 63,201 bp_covered 34,107,301 output_type accessible chromatin region genome_build hg38 cell_type T-helper 1 cell biosample_type Not applicable biosample_term_id CL:0000545 tissue_category Immune encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody Not applicable assay ATAC-seq file_format bed narrowPeak-lifted file_size 2,101,834 downloaded_date 10/03/2023 release_date 10/18/2021 date_added_to_filer 05/20/2026 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Accessible-chromatin-region/bed13/hg38/Sample_0228_accessible_chromatin_regions_hg38.bed.gz processed_file_md5 f3a641908326354d79e9df54ab2ac245 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Accessible-chromatin-region/bed13/hg38/Sample_0228_accessible_chromatin_regions_hg38.bed.gz -P FILER2/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Accessible-chromatin-region/bed13/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Accessible-chromatin-region/bed13/hg38/Sample_0228_accessible_chromatin_regions_hg38.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Accessible-chromatin-region/bed13/hg38/ link_out_url https://bio.liclab.net/ATACdb/ raw_file_url https://bio.liclab.net/ATACdb/download/download_car_bed/Sample_0228.bed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ATACdb/Accessible_chromatin_regions/Sample_0228.bed -P FILER2/Annotationtracks/Downloads/ATACdb/Accessible_chromatin_regions/ raw_file_md5 be442d789143959767b6f622aa4f32d7 data_category Accessible chromatin Genomic feature type ATAC-seq accessible chromatin region track_description version=v1.03;Sample_ID=Sample_0228;Biosample_Type=Other;Tissue_Type=Blood;Biosample_Name=Th1;Cancer_Type=Normal;Region_Number=63319;Length=34206.345 kb;GEO_SRA=SRR7650758;schema=BED3+10;dataSource_pubmed_id=33125076;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2 system_category Lymphatic life_stage Unknown track_name ATACdb_v1.03 T-helper 1 cell ATAC-seq accessible chromatin region (narrowPeak-lifted) [Accessible chromatin]
B cell NGADBXXBENQ4JM • ATACdb v1.03 ATAC-seq B cell Accessible chromatin Show metadata identifier NGADBXXBENQ4JM data_source ATACdb_v1.03 Download track Download number_of_intervals 18,575 bp_covered 9,314,616 output_type accessible chromatin region genome_build hg38 cell_type B cell biosample_type Primary cell biosample_term_id CL:0000236 tissue_category Immune encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody Not applicable assay ATAC-seq file_format bed narrowPeak-lifted file_size 621,961 downloaded_date 10/03/2023 release_date 10/18/2021 date_added_to_filer 05/20/2026 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Accessible-chromatin-region/bed13/hg38/Sample_0901_accessible_chromatin_regions_hg38.bed.gz processed_file_md5 6889461e043d6b450fe2f709f1489ff3 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Accessible-chromatin-region/bed13/hg38/Sample_0901_accessible_chromatin_regions_hg38.bed.gz -P FILER2/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Accessible-chromatin-region/bed13/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Accessible-chromatin-region/bed13/hg38/Sample_0901_accessible_chromatin_regions_hg38.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Accessible-chromatin-region/bed13/hg38/ link_out_url https://bio.liclab.net/ATACdb/ raw_file_url https://bio.liclab.net/ATACdb/download/download_car_bed/Sample_0901.bed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ATACdb/Accessible_chromatin_regions/Sample_0901.bed -P FILER2/Annotationtracks/Downloads/ATACdb/Accessible_chromatin_regions/ raw_file_md5 807525eaac3d1ec30b8889e1af816939 data_category Accessible chromatin Genomic feature type ATAC-seq accessible chromatin region track_description version=v1.03;Sample_ID=Sample_0901;Biosample_Type=Primary Cell;Tissue_Type=Lymphoblastoid;Biosample_Name=B cell;Cancer_Type=Epstein-Barr Virus (EBV);Region_Number=18629;Length=9370.678 kb;GEO_SRA=SRR5826005;schema=BED3+10;dataSource_pubmed_id=33125076;in_trackHub=yes;dataSource_acknowledgements=htt system_category Lymphatic life_stage Unknown track_name ATACdb_v1.03 B cell ATAC-seq accessible chromatin region (narrowPeak-lifted) [Accessible chromatin]
HL-60 NGADBXYFTPOTNC • ATACdb v1.03 ATAC-seq HL-60 Accessible chromatin Show metadata identifier NGADBXYFTPOTNC data_source ATACdb_v1.03 Download track Download number_of_intervals 37,639 bp_covered 16,102,854 output_type accessible chromatin region genome_build hg38 cell_type HL-60 biosample_type Cell line biosample_term_id EFO:0002793 tissue_category Blood encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody Not applicable assay ATAC-seq file_format bed narrowPeak-lifted file_size 1,223,625 downloaded_date 10/03/2023 release_date 10/18/2021 date_added_to_filer 05/20/2026 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Accessible-chromatin-region/bed13/hg38/Sample_0692_accessible_chromatin_regions_hg38.bed.gz processed_file_md5 d9de9e545cd69bc2efcd5022ffdb28e2 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Accessible-chromatin-region/bed13/hg38/Sample_0692_accessible_chromatin_regions_hg38.bed.gz -P FILER2/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Accessible-chromatin-region/bed13/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Accessible-chromatin-region/bed13/hg38/Sample_0692_accessible_chromatin_regions_hg38.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Accessible-chromatin-region/bed13/hg38/ link_out_url https://bio.liclab.net/ATACdb/ raw_file_url https://bio.liclab.net/ATACdb/download/download_car_bed/Sample_0692.bed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ATACdb/Accessible_chromatin_regions/Sample_0692.bed -P FILER2/Annotationtracks/Downloads/ATACdb/Accessible_chromatin_regions/ raw_file_md5 7a539b2e02196c120ed01497cdb8e57f data_category Accessible chromatin Genomic feature type ATAC-seq accessible chromatin region track_description version=v1.03;Sample_ID=Sample_0692;Biosample_Type=Cell Line;Tissue_Type=Blood;Biosample_Name=HL-60;Cancer_Type=Leukemia;Region_Number=37682;Length=16115.356 kb;GEO_SRA=SRR5196902;schema=BED3+10;dataSource_pubmed_id=33125076;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GAD system_category Cardiovascular life_stage Unknown track_name ATACdb_v1.03 HL-60 ATAC-seq accessible chromatin region (narrowPeak-lifted) [Accessible chromatin]
G523NS NGADBXYUXU4DST • ATACdb v1.03 ATAC-seq G523NS TFBS Show metadata identifier NGADBXYUXU4DST data_source ATACdb_v1.03 Download track Download number_of_intervals 113,486 bp_covered 1,523,063 output_type transcription factor binding sites genome_build hg38 cell_type G523NS biosample_type Cell line biosample_term_id Not available tissue_category Brain encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody Not applicable assay ATAC-seq file_format bed bed3+11 ATACdb-lifted file_size 3,769,886 downloaded_date 10/03/2023 release_date 10/18/2021 date_added_to_filer 05/20/2026 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Motif-overlap/bed14/hg38/Sample_0973_hg38_motif_binding_sites.bed.gz processed_file_md5 5337dfe5c295ed21fa37bff2f71777f9 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Motif-overlap/bed14/hg38/Sample_0973_hg38_motif_binding_sites.bed.gz -P FILER2/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Motif-overlap/bed14/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Motif-overlap/bed14/hg38/Sample_0973_hg38_motif_binding_sites.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Motif-overlap/bed14/hg38/ link_out_url https://bio.liclab.net/ATACdb/ raw_file_url https://bio.liclab.net/ATACdb/download/packages/Motif_scan_package.txt raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ATACdb/motif_scan/Motif_scan_package.txt -P FILER2/Annotationtracks/Downloads/ATACdb/motif_scan/ raw_file_md5 b279988d9f061984cc7e422702286f7d data_category TFBS [Transcription Factor Binding Site] Genomic feature type ATAC-seq transcription factor binding sites track_description version=v1.03;Sample_ID=Sample_0973;Biosample_Type=Cell Line;Tissue_Type=Glioblastoma;Biosample_Name=G523NS;Cancer_Type=Glioblastoma;Region_Number=31062;Length=12015.138 kb;GEO_SRA=SRR5057780;schema=BED3+11;dataSource_pubmed_id=33125076;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwan system_category Nervous life_stage Unknown track_name ATACdb_v1.03 G523NS ATAC-seq transcription factor binding sites (bed3+11 ATACdb-lifted) [TFBS]
T-helper 2 cell NGADBXZ35SJWM6 • ATACdb v1.03 ATAC-seq T-helper 2 cell Accessible chromatin Show metadata identifier NGADBXZ35SJWM6 data_source ATACdb_v1.03 Download track Download number_of_intervals 39,924 bp_covered 18,047,012 output_type accessible chromatin region genome_build hg38 cell_type T-helper 2 cell biosample_type Not applicable biosample_term_id CL:0000546 tissue_category Immune encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody Not applicable assay ATAC-seq file_format bed narrowPeak-lifted file_size 1,341,686 downloaded_date 10/03/2023 release_date 10/18/2021 date_added_to_filer 05/20/2026 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Accessible-chromatin-region/bed13/hg38/Sample_0312_accessible_chromatin_regions_hg38.bed.gz processed_file_md5 1d6d07307b576bea64db6a27cb7bff4a wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Accessible-chromatin-region/bed13/hg38/Sample_0312_accessible_chromatin_regions_hg38.bed.gz -P FILER2/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Accessible-chromatin-region/bed13/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Accessible-chromatin-region/bed13/hg38/Sample_0312_accessible_chromatin_regions_hg38.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Accessible-chromatin-region/bed13/hg38/ link_out_url https://bio.liclab.net/ATACdb/ raw_file_url https://bio.liclab.net/ATACdb/download/download_car_bed/Sample_0312.bed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ATACdb/Accessible_chromatin_regions/Sample_0312.bed -P FILER2/Annotationtracks/Downloads/ATACdb/Accessible_chromatin_regions/ raw_file_md5 aa10fbda0b97e704f4e9478321816d97 data_category Accessible chromatin Genomic feature type ATAC-seq accessible chromatin region track_description version=v1.03;Sample_ID=Sample_0312;Biosample_Type=Other;Tissue_Type=Blood;Biosample_Name=Th2;Cancer_Type=Normal;Region_Number=40017;Length=18079.299 kb;GEO_SRA=SRR7650843;schema=BED3+10;dataSource_pubmed_id=33125076;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2 system_category Lymphatic life_stage Unknown track_name ATACdb_v1.03 T-helper 2 cell ATAC-seq accessible chromatin region (narrowPeak-lifted) [Accessible chromatin]
CD56bright natural killer cell NGADBXZBGBJKSK • ATACdb v1.03 ATAC-seq CD56bright natural killer cell TFBS Show metadata identifier NGADBXZBGBJKSK data_source ATACdb_v1.03 Download track Download number_of_intervals 148,961 bp_covered 2,041,217 output_type transcription factor binding sites genome_build hg38 cell_type CD56bright natural killer cell biosample_type Primary cell biosample_term_id CL:0000938 tissue_category Blood encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody Not applicable assay ATAC-seq file_format bed bed3+11 ATACdb-lifted file_size 5,259,937 downloaded_date 10/03/2023 release_date 10/18/2021 date_added_to_filer 05/20/2026 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Motif-overlap/bed14/hg38/Sample_0027_hg38_motif_binding_sites.bed.gz processed_file_md5 7ff6ced0f73c7e4006bea72c1b6eed31 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Motif-overlap/bed14/hg38/Sample_0027_hg38_motif_binding_sites.bed.gz -P FILER2/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Motif-overlap/bed14/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Motif-overlap/bed14/hg38/Sample_0027_hg38_motif_binding_sites.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Motif-overlap/bed14/hg38/ link_out_url https://bio.liclab.net/ATACdb/ raw_file_url https://bio.liclab.net/ATACdb/download/packages/Motif_scan_package.txt raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ATACdb/motif_scan/Motif_scan_package.txt -P FILER2/Annotationtracks/Downloads/ATACdb/motif_scan/ raw_file_md5 b279988d9f061984cc7e422702286f7d data_category TFBS [Transcription Factor Binding Site] Genomic feature type ATAC-seq transcription factor binding sites track_description version=v1.03;Sample_ID=Sample_0027;Biosample_Type=Primary Cell;Tissue_Type=Blood;Biosample_Name=CD56Bright natural killer cell;Cancer_Type=Normal;Region_Number=47349;Length=22331.165 kb;GEO_SRA=SRR6955603;schema=BED3+11;dataSource_pubmed_id=33125076;in_trackHub=yes;dataSource_acknowledgements=https system_category Cardiovascular life_stage Unknown track_name ATACdb_v1.03 CD56bright natural killer cell ATAC-seq transcription factor binding sites (bed3+11 ATACdb-lifted) [TFBS]