consolidated • Sigmoid colon NGRMP2SQETQ3XH • ROADMAP Enhancers25693563 ChromHMM Sigmoid colon Enhancer Show metadata Download track Track metadata identifier NGRMP2SQETQ3XH data_source ROADMAP_Enhancers Download track Download number_of_intervals 87,117 bp_covered 65,559,041 output_type enhancer chromatin states genome_build hg38 cell_type Sigmoid colon biosample_type Primary tissue biosample_term_id UBERON:0001159 tissue_category Digestive encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody consolidated assay ChromHMM file_format bed bed4 file_size 575,419 downloaded_date 08/15/2018 release_date 03/30/2018 date_added_to_filer 02/20/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/E106_15_coreMarks_hg38lift_mnemonics_enhancer.bed.gz processed_file_md5 83c16f53ed4c617a660bf1bcfaa1e4c4 wget_command wget https://filer2.niagads.org/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/E106_15_coreMarks_hg38lift_mnemonics_enhancer.bed.gz -P GADB/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/E106_15_coreMarks_hg38lift_mnemonics_enhancer.bed.gz.tbi -P GADB/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/all_hg38lift.mnemonics.bedFiles.tgz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/ChromHMM/E106_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/Downloads/ROADMAP/ChromHMM/ raw_file_md5 e3d64f0589eb2b00497973e4d6947da8 data_category Enhancer Genomic feature type ChromHMM consolidated enhancer chromatin states track_description version=2018;Original_cell_type=Sigmoid Colon;schema=BED4;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP_Enhancers.html;original_biosample_term_id=UBERON:0001159;is_hg38_lifted=no system_category Digestive life_stage Unknown track_name ROADMAP_Enhancers Sigmoid colon ChromHMM consolidated enhancer chromatin states (bed4) [Enhancer]
consolidated • Peripheral blood mononuclear cell NGRMP2VS6TLFQ4 • ROADMAP Enhancers25693563 ChromHMM Peripheral blood mononuclear cell Enhancer Show metadata Download track Track metadata identifier NGRMP2VS6TLFQ4 data_source ROADMAP_Enhancers Download track Download number_of_intervals 58,786 bp_covered 39,078,825 output_type enhancer chromatin states genome_build hg38 cell_type Peripheral blood mononuclear cell biosample_type Primary cell biosample_term_id CL:2000001 tissue_category Blood encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody consolidated assay ChromHMM file_format bed bed4 file_size 394,177 downloaded_date 08/15/2018 release_date 03/30/2018 date_added_to_filer 02/20/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/E062_15_coreMarks_hg38lift_mnemonics_enhancer.bed.gz processed_file_md5 606000e3af6fd76ec880abb670c8bec4 wget_command wget https://filer2.niagads.org/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/E062_15_coreMarks_hg38lift_mnemonics_enhancer.bed.gz -P GADB/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/E062_15_coreMarks_hg38lift_mnemonics_enhancer.bed.gz.tbi -P GADB/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/all_hg38lift.mnemonics.bedFiles.tgz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/ChromHMM/E062_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/Downloads/ROADMAP/ChromHMM/ raw_file_md5 0ddfbd01c02a3f971bc8e109f87ebf58 data_category Enhancer Genomic feature type ChromHMM consolidated enhancer chromatin states track_description version=2018;Original_cell_type=Primary mononuclear cells from peripheral blood;schema=BED4;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP_Enhancers.html;original_biosample_term_id=Not available;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name ROADMAP_Enhancers Peripheral blood mononuclear cell ChromHMM consolidated enhancer chromatin states (bed4) [Enhancer]
consolidated • H1-hESC NGRMP2ZCLFKLF7 • ROADMAP Enhancers25693563 ChromHMM H1-hESC Enhancer Show metadata Download track Track metadata identifier NGRMP2ZCLFKLF7 data_source ROADMAP_Enhancers Download track Download number_of_intervals 119,069 bp_covered 99,048,876 output_type enhancer chromatin states genome_build hg38 cell_type H1-hESC biosample_type Stem cell biosample_term_id EFO:0003042 tissue_category Embryo encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody consolidated assay ChromHMM file_format bed bed4 file_size 789,821 downloaded_date 08/15/2018 release_date 03/30/2018 date_added_to_filer 02/20/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/E003_15_coreMarks_hg38lift_mnemonics_enhancer.bed.gz processed_file_md5 e76e514831baa7c3af8c0258701d3d36 wget_command wget https://filer2.niagads.org/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/E003_15_coreMarks_hg38lift_mnemonics_enhancer.bed.gz -P GADB/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/E003_15_coreMarks_hg38lift_mnemonics_enhancer.bed.gz.tbi -P GADB/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/all_hg38lift.mnemonics.bedFiles.tgz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/ChromHMM/E003_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/Downloads/ROADMAP/ChromHMM/ raw_file_md5 a5a0f7cf243a3002669993797b44a164 data_category Enhancer Genomic feature type ChromHMM consolidated enhancer chromatin states track_description version=2018;Original_cell_type=H1 Cells;schema=BED4;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP_Enhancers.html;original_biosample_term_id=EFO:0003042;is_hg38_lifted=no system_category Embryo life_stage Embryonic track_name ROADMAP_Enhancers H1-hESC ChromHMM consolidated enhancer chromatin states (bed4) [Life stage: Embryonic] [Enhancer]
consolidated • Germinal matrix NGRMP336L7APRE • ROADMAP Enhancers25693563 ChromHMM Germinal matrix Enhancer Show metadata Download track Track metadata identifier NGRMP336L7APRE data_source ROADMAP_Enhancers Download track Download number_of_intervals 89,253 bp_covered 76,668,339 output_type enhancer chromatin states genome_build hg38 cell_type Germinal matrix biosample_type Primary tissue biosample_term_id Not available tissue_category Brain encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody consolidated assay ChromHMM file_format bed bed4 file_size 593,510 downloaded_date 08/15/2018 release_date 03/30/2018 date_added_to_filer 02/20/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/E070_15_coreMarks_hg38lift_mnemonics_enhancer.bed.gz processed_file_md5 5449acf244a31881da7585cf9ab07f3a wget_command wget https://filer2.niagads.org/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/E070_15_coreMarks_hg38lift_mnemonics_enhancer.bed.gz -P GADB/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/E070_15_coreMarks_hg38lift_mnemonics_enhancer.bed.gz.tbi -P GADB/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/all_hg38lift.mnemonics.bedFiles.tgz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/ChromHMM/E070_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/Downloads/ROADMAP/ChromHMM/ raw_file_md5 bd233c52718fc7c448fc637ef629e559 data_category Enhancer Genomic feature type ChromHMM consolidated enhancer chromatin states track_description version=2018;Original_cell_type=Brain Germinal Matrix;schema=BED4;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP_Enhancers.html;original_biosample_term_id=NTR:0001407;is_hg38_lifted=no system_category Nervous life_stage Unknown track_name ROADMAP_Enhancers Germinal matrix ChromHMM consolidated enhancer chromatin states (bed4) [Enhancer]
consolidated • Neuron NGRMP35QA7X2VX • ROADMAP Enhancers25693563 ChromHMM Neuron Enhancer Show metadata Download track Track metadata identifier NGRMP35QA7X2VX data_source ROADMAP_Enhancers Download track Download number_of_intervals 117,023 bp_covered 114,431,326 output_type enhancer chromatin states genome_build hg38 cell_type Neuron biosample_type In vitro differentiated cells biosample_term_id CL:0000540 tissue_category Brain encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody consolidated assay ChromHMM file_format bed bed4 file_size 783,839 downloaded_date 08/15/2018 release_date 03/30/2018 date_added_to_filer 02/20/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/E010_15_coreMarks_hg38lift_mnemonics_enhancer.bed.gz processed_file_md5 bc3346419cf6b677dc7df39c3f1c5f12 wget_command wget https://filer2.niagads.org/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/E010_15_coreMarks_hg38lift_mnemonics_enhancer.bed.gz -P GADB/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/E010_15_coreMarks_hg38lift_mnemonics_enhancer.bed.gz.tbi -P GADB/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/all_hg38lift.mnemonics.bedFiles.tgz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/ChromHMM/E010_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/Downloads/ROADMAP/ChromHMM/ raw_file_md5 e7cb04c465d354c0693db4a094f95788 data_category Enhancer Genomic feature type ChromHMM consolidated enhancer chromatin states track_description version=2018;Original_cell_type=H9 Derived Neuron Cultured Cells;schema=BED4;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP_Enhancers.html;original_biosample_term_id=Not available;is_hg38_lifted=no system_category Nervous life_stage Embryonic track_name ROADMAP_Enhancers Neuron ChromHMM consolidated enhancer chromatin states (bed4) [Life stage: Embryonic] [Enhancer]
consolidated • Ovary NGRMP3DT3PLRVU • ROADMAP25693563 ChromHMM Ovary Chromatin states Show metadata Download track Track metadata identifier NGRMP3DT3PLRVU data_source ROADMAP Download track Download number_of_intervals 393,677 bp_covered 2,865,575,419 output_type chromatin states genome_build hg38 cell_type Ovary biosample_type Primary tissue biosample_term_id NCIT:C12404 tissue_category Female Reproductive encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody consolidated assay ChromHMM file_format bed bed4 file_size 2,299,959 downloaded_date 08/15/2018 release_date 03/30/2018 date_added_to_filer 02/20/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E097_15_coreMarks_hg38lift_mnemonics.bed.gz processed_file_md5 bc04cfb9bd2a691beeff28a55f6397e1 wget_command wget https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E097_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E097_15_coreMarks_hg38lift_mnemonics.bed.gz.tbi -P GADB/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/all_hg38lift.mnemonics.bedFiles.tgz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/ChromHMM/E097_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/Downloads/ROADMAP/ChromHMM/ raw_file_md5 f25ddaccca73ebe6425e4f3e26c40fb2 data_category Chromatin states Genomic feature type ChIP-seq consolidated ChromHMM track_description version=2018;Original_cell_type=Ovary;schema=BED4;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=no system_category Reproductive life_stage Unknown track_name ROADMAP Ovary ChromHMM consolidated chromatin states (bed4) [Chromatin states]
consolidated • CD14+ monocyte NGRMP3SDIRNVY2 • ROADMAP Enhancers25693563 ChromHMM CD14+ monocyte Enhancer Show metadata Download track Track metadata identifier NGRMP3SDIRNVY2 data_source ROADMAP_Enhancers Download track Download number_of_intervals 113,439 bp_covered 90,870,358 output_type enhancer chromatin states genome_build hg38 cell_type CD14+ monocyte biosample_type Primary cell biosample_term_id CL:0001054 tissue_category Blood encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody consolidated assay ChromHMM file_format bed bed4 file_size 737,849 downloaded_date 08/15/2018 release_date 03/30/2018 date_added_to_filer 02/20/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/E124_15_coreMarks_hg38lift_mnemonics_enhancer.bed.gz processed_file_md5 e0755be8f3b3cecad4483ce381b99bbf wget_command wget https://filer2.niagads.org/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/E124_15_coreMarks_hg38lift_mnemonics_enhancer.bed.gz -P GADB/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/E124_15_coreMarks_hg38lift_mnemonics_enhancer.bed.gz.tbi -P GADB/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/all_hg38lift.mnemonics.bedFiles.tgz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/ChromHMM/E124_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/Downloads/ROADMAP/ChromHMM/ raw_file_md5 599d282cdc58b38c5dfd1f41b7bf0334 data_category Enhancer Genomic feature type ChromHMM consolidated enhancer chromatin states track_description version=2018;Original_cell_type=Monocytes-CD14+ RO01746 Primary Cells;schema=BED4;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP_Enhancers.html;original_biosample_term_id=Not available;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name ROADMAP_Enhancers CD14+ monocyte ChromHMM consolidated enhancer chromatin states (bed4) [Enhancer]
consolidated • Mucosa NGRMP3SUNQ7ADN • ROADMAP25693563 ChromHMM Mucosa Chromatin states Show metadata Download track Track metadata identifier NGRMP3SUNQ7ADN data_source ROADMAP Download track Download number_of_intervals 328,117 bp_covered 2,865,575,419 output_type chromatin states genome_build hg38 cell_type Mucosa biosample_type Primary tissue biosample_term_id UBERON:0000344 tissue_category Digestive encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody consolidated assay ChromHMM file_format bed bed4 file_size 1,924,439 downloaded_date 08/15/2018 release_date 03/30/2018 date_added_to_filer 02/20/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E110_15_coreMarks_hg38lift_mnemonics.bed.gz processed_file_md5 e9779f96205d73d2514d49101128c40d wget_command wget https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E110_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E110_15_coreMarks_hg38lift_mnemonics.bed.gz.tbi -P GADB/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/all_hg38lift.mnemonics.bedFiles.tgz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/ChromHMM/E110_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/Downloads/ROADMAP/ChromHMM/ raw_file_md5 62f08767ea8e5de13de0b4878dcb07be data_category Chromatin states Genomic feature type ChIP-seq consolidated ChromHMM track_description version=2018;Original_cell_type=Mucosa of stomach;schema=BED4;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=no system_category Digestive life_stage Unknown track_name ROADMAP Mucosa ChromHMM consolidated chromatin states (bed4) [Chromatin states]
consolidated • Thymus NGRMP3U3OMOOBQ • ROADMAP25693563 ChromHMM Thymus Chromatin states Show metadata Download track Track metadata identifier NGRMP3U3OMOOBQ data_source ROADMAP Download track Download number_of_intervals 387,607 bp_covered 2,865,575,419 output_type chromatin states genome_build hg38 cell_type Thymus biosample_type Primary tissue biosample_term_id UBERON:0002370 tissue_category Immune Organ encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody consolidated assay ChromHMM file_format bed bed4 file_size 2,299,102 downloaded_date 08/15/2018 release_date 03/30/2018 date_added_to_filer 02/20/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E093_15_coreMarks_hg38lift_mnemonics.bed.gz processed_file_md5 a693c0647ced6486f9de9c774781c0bc wget_command wget https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E093_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E093_15_coreMarks_hg38lift_mnemonics.bed.gz.tbi -P GADB/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/all_hg38lift.mnemonics.bedFiles.tgz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/ChromHMM/E093_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/Downloads/ROADMAP/ChromHMM/ raw_file_md5 f464bd1fce0f061424f01223720c3a45 data_category Chromatin states Genomic feature type ChIP-seq consolidated ChromHMM track_description version=2018;Original_cell_type=Fetal Thymus;schema=BED4;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=no system_category Lymphatic life_stage Fetal track_name ROADMAP Thymus ChromHMM consolidated chromatin states (bed4) [Life stage: Fetal] [Chromatin states]
consolidated • HMEC NGRMP3YUAQW7ID • ROADMAP Enhancers25693563 ChromHMM HMEC Enhancer Show metadata Download track Track metadata identifier NGRMP3YUAQW7ID data_source ROADMAP_Enhancers Download track Download number_of_intervals 121,510 bp_covered 133,849,227 output_type enhancer chromatin states genome_build hg38 cell_type HMEC biosample_type Primary culture biosample_term_id EFO:0001188 tissue_category Breast encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody consolidated assay ChromHMM file_format bed bed4 file_size 801,076 downloaded_date 08/15/2018 release_date 03/30/2018 date_added_to_filer 02/20/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/E119_15_coreMarks_hg38lift_mnemonics_enhancer.bed.gz processed_file_md5 dfbc9bbdfb2a5bce6a5b93fc265e9702 wget_command wget https://filer2.niagads.org/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/E119_15_coreMarks_hg38lift_mnemonics_enhancer.bed.gz -P GADB/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/E119_15_coreMarks_hg38lift_mnemonics_enhancer.bed.gz.tbi -P GADB/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/all_hg38lift.mnemonics.bedFiles.tgz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/ChromHMM/E119_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/Downloads/ROADMAP/ChromHMM/ raw_file_md5 03a9b8ff5ac69dd5f8a7b90416a23c57 data_category Enhancer Genomic feature type ChromHMM consolidated enhancer chromatin states track_description version=2018;Original_cell_type=HMEC Mammary Epithelial Primary Cells;schema=BED4;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP_Enhancers.html;original_biosample_term_id=Not available;is_hg38_lifted=no system_category Reproductive life_stage Unknown track_name ROADMAP_Enhancers HMEC ChromHMM consolidated enhancer chromatin states (bed4) [Enhancer]
consolidated • HUVEC NGRMP43WCPEQCO • ROADMAP25693563 ChromHMM HUVEC Chromatin states Show metadata Download track Track metadata identifier NGRMP43WCPEQCO data_source ROADMAP Download track Download number_of_intervals 479,592 bp_covered 2,865,575,419 output_type chromatin states genome_build hg38 cell_type HUVEC biosample_type Primary culture biosample_term_id EFO:0002451 tissue_category Umbilical Cord encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody consolidated assay ChromHMM file_format bed bed4 file_size 2,830,609 downloaded_date 08/15/2018 release_date 03/30/2018 date_added_to_filer 02/20/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E122_15_coreMarks_hg38lift_mnemonics.bed.gz processed_file_md5 90930e0c56b93ba83c7d065374e076f2 wget_command wget https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E122_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E122_15_coreMarks_hg38lift_mnemonics.bed.gz.tbi -P GADB/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/all_hg38lift.mnemonics.bedFiles.tgz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/ChromHMM/E122_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/Downloads/ROADMAP/ChromHMM/ raw_file_md5 7c3010b082bfb188b5b66c6ba25764db data_category Chromatin states Genomic feature type ChIP-seq consolidated ChromHMM track_description version=2018;Original_cell_type=HUVEC Umbilical Vein Endothelial Primary Cells;schema=BED4;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=no system_category Embryo life_stage Embryonic track_name ROADMAP HUVEC ChromHMM consolidated chromatin states (bed4) [Life stage: Embryonic] [Chromatin states]
consolidated • T-cell NGRMP444274DUK • ROADMAP Enhancers25693563 ChromHMM T-cell Enhancer Show metadata Download track Track metadata identifier NGRMP444274DUK data_source ROADMAP_Enhancers Download track Download number_of_intervals 76,641 bp_covered 81,767,835 output_type enhancer chromatin states genome_build hg38 cell_type T-cell biosample_type Primary cell biosample_term_id CL:0000084 tissue_category Blood encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody consolidated assay ChromHMM file_format bed bed4 file_size 503,881 downloaded_date 08/15/2018 release_date 03/30/2018 date_added_to_filer 02/20/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/E033_15_coreMarks_hg38lift_mnemonics_enhancer.bed.gz processed_file_md5 2707aba017324c283a58fdd23a686707 wget_command wget https://filer2.niagads.org/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/E033_15_coreMarks_hg38lift_mnemonics_enhancer.bed.gz -P GADB/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/E033_15_coreMarks_hg38lift_mnemonics_enhancer.bed.gz.tbi -P GADB/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/all_hg38lift.mnemonics.bedFiles.tgz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/ChromHMM/E033_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/Downloads/ROADMAP/ChromHMM/ raw_file_md5 89ea39b3565c09a1999af37c27a2ee71 data_category Enhancer Genomic feature type ChromHMM consolidated enhancer chromatin states track_description version=2018;Original_cell_type=Primary T cells from cord blood;schema=BED4;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP_Enhancers.html;original_biosample_term_id=Not available;is_hg38_lifted=no system_category Cardiovascular life_stage Fetal track_name ROADMAP_Enhancers T-cell ChromHMM consolidated enhancer chromatin states (bed4) [Life stage: Fetal] [Enhancer]
consolidated • Liver NGRMP4GVVW7RGO • ROADMAP25693563 ChromHMM Liver Chromatin states Show metadata Download track Track metadata identifier NGRMP4GVVW7RGO data_source ROADMAP Download track Download number_of_intervals 497,701 bp_covered 2,865,575,419 output_type chromatin states genome_build hg38 cell_type Liver biosample_type Primary tissue biosample_term_id UBERON:0002107 tissue_category Liver encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody consolidated assay ChromHMM file_format bed bed4 file_size 2,933,773 downloaded_date 08/15/2018 release_date 03/30/2018 date_added_to_filer 02/20/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E066_15_coreMarks_hg38lift_mnemonics.bed.gz processed_file_md5 71c805564d6b8149a750edca4adb090e wget_command wget https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E066_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E066_15_coreMarks_hg38lift_mnemonics.bed.gz.tbi -P GADB/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/all_hg38lift.mnemonics.bedFiles.tgz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/ChromHMM/E066_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/Downloads/ROADMAP/ChromHMM/ raw_file_md5 4041f700714f2e6eb30f4da720b3ee38 data_category Chromatin states Genomic feature type ChIP-seq consolidated ChromHMM track_description version=2018;Original_cell_type=Liver;schema=BED4;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=no system_category Digestive life_stage Unknown track_name ROADMAP Liver ChromHMM consolidated chromatin states (bed4) [Chromatin states]
consolidated • Cingulate gyrus NGRMP4ID3MOP3B • ROADMAP Enhancers25693563 ChromHMM Cingulate gyrus Enhancer Show metadata Download track Track metadata identifier NGRMP4ID3MOP3B data_source ROADMAP_Enhancers Download track Download number_of_intervals 106,044 bp_covered 97,458,143 output_type enhancer chromatin states genome_build hg38 cell_type Cingulate gyrus biosample_type Primary tissue biosample_term_id UBERON:0002967 tissue_category Brain encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody consolidated assay ChromHMM file_format bed bed4 file_size 691,888 downloaded_date 08/15/2018 release_date 03/30/2018 date_added_to_filer 02/20/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/E069_15_coreMarks_hg38lift_mnemonics_enhancer.bed.gz processed_file_md5 e83bb97e4c22c0e42c9aa6bd1936cfa0 wget_command wget https://filer2.niagads.org/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/E069_15_coreMarks_hg38lift_mnemonics_enhancer.bed.gz -P GADB/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/E069_15_coreMarks_hg38lift_mnemonics_enhancer.bed.gz.tbi -P GADB/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/all_hg38lift.mnemonics.bedFiles.tgz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/ChromHMM/E069_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/Downloads/ROADMAP/ChromHMM/ raw_file_md5 085fb683ebeed11192ddf668339bdd9c data_category Enhancer Genomic feature type ChromHMM consolidated enhancer chromatin states track_description version=2018;Original_cell_type=Brain Cingulate Gyrus;schema=BED4;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP_Enhancers.html;original_biosample_term_id=Not available;is_hg38_lifted=no system_category Nervous life_stage Unknown track_name ROADMAP_Enhancers Cingulate gyrus ChromHMM consolidated enhancer chromatin states (bed4) [Enhancer]
consolidated • Dorsolateral prefrontal cortex NGRMP4M4E53NE6 • ROADMAP25693563 ChromHMM Dorsolateral prefrontal cortex Chromatin states Show metadata Download track Track metadata identifier NGRMP4M4E53NE6 data_source ROADMAP Download track Download number_of_intervals 371,154 bp_covered 2,865,575,419 output_type chromatin states genome_build hg38 cell_type Dorsolateral prefrontal cortex biosample_type Primary tissue biosample_term_id UBERON:0009834 tissue_category Brain encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody consolidated assay ChromHMM file_format bed bed4 file_size 2,183,351 downloaded_date 08/15/2018 release_date 03/30/2018 date_added_to_filer 02/20/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E073_15_coreMarks_hg38lift_mnemonics.bed.gz processed_file_md5 6211d67e824104683a35eacb6b0b767a wget_command wget https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E073_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E073_15_coreMarks_hg38lift_mnemonics.bed.gz.tbi -P GADB/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/all_hg38lift.mnemonics.bedFiles.tgz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/ChromHMM/E073_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/Downloads/ROADMAP/ChromHMM/ raw_file_md5 6ab69c01e54e65e0093c897f47cb8869 data_category Chromatin states Genomic feature type ChIP-seq consolidated ChromHMM track_description version=2018;Original_cell_type=Brain_Dorsolateral_Prefrontal_Cortex;schema=BED4;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=no system_category Nervous life_stage Unknown track_name ROADMAP Dorsolateral prefrontal cortex ChromHMM consolidated chromatin states (bed4) [Chromatin states]
consolidated • Adrenal gland NGRMP4NYLB5VZT • ROADMAP25693563 ChromHMM Adrenal gland Chromatin states Show metadata Download track Track metadata identifier NGRMP4NYLB5VZT data_source ROADMAP Download track Download number_of_intervals 603,718 bp_covered 2,865,575,419 output_type chromatin states genome_build hg38 cell_type Adrenal gland biosample_type Primary tissue biosample_term_id UBERON:0002369 tissue_category Endocrine encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody consolidated assay ChromHMM file_format bed bed4 file_size 3,584,249 downloaded_date 08/15/2018 release_date 03/30/2018 date_added_to_filer 02/20/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E080_15_coreMarks_hg38lift_mnemonics.bed.gz processed_file_md5 42d909b0997236815014d03ccc46d692 wget_command wget https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E080_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E080_15_coreMarks_hg38lift_mnemonics.bed.gz.tbi -P GADB/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/all_hg38lift.mnemonics.bedFiles.tgz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/ChromHMM/E080_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/Downloads/ROADMAP/ChromHMM/ raw_file_md5 a5b0c34c0fd7156652d050506796c918 data_category Chromatin states Genomic feature type ChIP-seq consolidated ChromHMM track_description version=2018;Original_cell_type=Fetal Adrenal Gland;schema=BED4;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=no system_category Endocrine life_stage Fetal track_name ROADMAP Adrenal gland ChromHMM consolidated chromatin states (bed4) [Life stage: Fetal] [Chromatin states]
consolidated • Fibroblast NGRMP4VIJOZ3PF • ROADMAP Enhancers25693563 ChromHMM Fibroblast Enhancer Show metadata Download track Track metadata identifier NGRMP4VIJOZ3PF data_source ROADMAP_Enhancers Download track Download number_of_intervals 151,112 bp_covered 139,364,885 output_type enhancer chromatin states genome_build hg38 cell_type Fibroblast biosample_type Primary cell biosample_term_id CL:0000057 tissue_category Skin encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody consolidated assay ChromHMM file_format bed bed4 file_size 984,506 downloaded_date 08/15/2018 release_date 03/30/2018 date_added_to_filer 02/20/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/E055_15_coreMarks_hg38lift_mnemonics_enhancer.bed.gz processed_file_md5 a390462e2c954350311a05ef05b576b4 wget_command wget https://filer2.niagads.org/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/E055_15_coreMarks_hg38lift_mnemonics_enhancer.bed.gz -P GADB/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/E055_15_coreMarks_hg38lift_mnemonics_enhancer.bed.gz.tbi -P GADB/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/all_hg38lift.mnemonics.bedFiles.tgz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/ChromHMM/E055_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/Downloads/ROADMAP/ChromHMM/ raw_file_md5 4e176f25ed34d6a7a712913af0a933e0 data_category Enhancer Genomic feature type ChromHMM consolidated enhancer chromatin states track_description version=2018;Original_cell_type=Foreskin fibroblast Primary Cells skin01;schema=BED4;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP_Enhancers.html;original_biosample_term_id=Not available;is_hg38_lifted=no system_category Integumentary life_stage Unknown track_name ROADMAP_Enhancers Fibroblast ChromHMM consolidated enhancer chromatin states (bed4) [Enhancer]
consolidated • ES-I3 NGRMP4YT4FSWAW • ROADMAP Enhancers25693563 ChromHMM ES-I3 Enhancer Show metadata Download track Track metadata identifier NGRMP4YT4FSWAW data_source ROADMAP_Enhancers Download track Download number_of_intervals 144,692 bp_covered 124,703,742 output_type enhancer chromatin states genome_build hg38 cell_type ES-I3 biosample_type Stem cell biosample_term_id EFO:0007076 tissue_category Embryo encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody consolidated assay ChromHMM file_format bed bed4 file_size 950,716 downloaded_date 08/15/2018 release_date 03/30/2018 date_added_to_filer 02/20/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/E001_15_coreMarks_hg38lift_mnemonics_enhancer.bed.gz processed_file_md5 e82fcc1715ad79cd5e6ac46e1f2b31cc wget_command wget https://filer2.niagads.org/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/E001_15_coreMarks_hg38lift_mnemonics_enhancer.bed.gz -P GADB/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/E001_15_coreMarks_hg38lift_mnemonics_enhancer.bed.gz.tbi -P GADB/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/all_hg38lift.mnemonics.bedFiles.tgz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/ChromHMM/E001_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/Downloads/ROADMAP/ChromHMM/ raw_file_md5 84a1b6356012354cd4d48cff57a8877d data_category Enhancer Genomic feature type ChromHMM consolidated enhancer chromatin states track_description version=2018;Original_cell_type=ES-I3 Cells;schema=BED4;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP_Enhancers.html;original_biosample_term_id=EFO:0007076;is_hg38_lifted=no system_category Embryo life_stage Embryonic track_name ROADMAP_Enhancers ES-I3 ChromHMM consolidated enhancer chromatin states (bed4) [Life stage: Embryonic] [Enhancer]
consolidated • iPS DF 6.9 NGRMP4YXLC6GZT • ROADMAP25693563 ChromHMM iPS DF 6.9 Chromatin states Show metadata Download track Track metadata identifier NGRMP4YXLC6GZT data_source ROADMAP Download track Download number_of_intervals 315,755 bp_covered 2,865,575,419 output_type chromatin states genome_build hg38 cell_type iPS DF 6.9 biosample_type Primary culture biosample_term_id EFO:0007098 tissue_category iPSC encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody consolidated assay ChromHMM file_format bed bed4 file_size 1,844,872 downloaded_date 08/15/2018 release_date 03/30/2018 date_added_to_filer 02/20/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E021_15_coreMarks_hg38lift_mnemonics.bed.gz processed_file_md5 dde6e436f369b0d0ac47040d268de918 wget_command wget https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E021_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E021_15_coreMarks_hg38lift_mnemonics.bed.gz.tbi -P GADB/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/all_hg38lift.mnemonics.bedFiles.tgz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/ChromHMM/E021_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/Downloads/ROADMAP/ChromHMM/ raw_file_md5 ba72d74483f2a98e4e6fca4eaa683b18 data_category Chromatin states Genomic feature type ChIP-seq consolidated ChromHMM track_description version=2018;Original_cell_type=iPS DF 6.9 Cells;schema=BED4;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP.html;original_biosample_term_id=EFO:0007098;is_hg38_lifted=no system_category Stem Cell life_stage Unknown track_name ROADMAP iPS DF 6.9 ChromHMM consolidated chromatin states (bed4) [Chromatin states]
consolidated • Aorta NGRMP555CVEJLS • ROADMAP25693563 ChromHMM Aorta Chromatin states Show metadata Download track Track metadata identifier NGRMP555CVEJLS data_source ROADMAP Download track Download number_of_intervals 429,983 bp_covered 2,865,575,419 output_type chromatin states genome_build hg38 cell_type Aorta biosample_type Primary tissue biosample_term_id UBERON:0000947 tissue_category Blood Vessel encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody consolidated assay ChromHMM file_format bed bed4 file_size 2,500,672 downloaded_date 08/15/2018 release_date 03/30/2018 date_added_to_filer 02/20/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E065_15_coreMarks_hg38lift_mnemonics.bed.gz processed_file_md5 184cd13311856e2f3ab6c874cbd1cada wget_command wget https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E065_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E065_15_coreMarks_hg38lift_mnemonics.bed.gz.tbi -P GADB/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/all_hg38lift.mnemonics.bedFiles.tgz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/ChromHMM/E065_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/Downloads/ROADMAP/ChromHMM/ raw_file_md5 cd04b17e9d982e88bd5efb719ad8ffaf data_category Chromatin states Genomic feature type ChIP-seq consolidated ChromHMM track_description version=2018;Original_cell_type=Aorta;schema=BED4;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name ROADMAP Aorta ChromHMM consolidated chromatin states (bed4) [Chromatin states]