consolidated • Epithelial cell NGRMPBKLVTBJYL • ROADMAP25693563 ChromHMM Epithelial cell Chromatin states Show metadata Download track Track metadata identifier NGRMPBKLVTBJYL data_source ROADMAP Download track Download number_of_intervals 502,770 bp_covered 2,865,575,419 output_type chromatin states genome_build hg38 cell_type Epithelial cell biosample_type Primary culture biosample_term_id CL:0000066 tissue_category Breast encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody consolidated assay ChromHMM file_format bed bed4 file_size 2,929,810 downloaded_date 08/15/2018 release_date 03/30/2018 date_added_to_filer 02/20/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E028_15_coreMarks_hg38lift_mnemonics.bed.gz processed_file_md5 a3a79863c1bd0c30756a798e37f60031 wget_command wget https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E028_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E028_15_coreMarks_hg38lift_mnemonics.bed.gz.tbi -P GADB/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/all_hg38lift.mnemonics.bedFiles.tgz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/ChromHMM/E028_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/Downloads/ROADMAP/ChromHMM/ raw_file_md5 b4d39ceed21aff843f8fd055ed8d3c47 data_category Chromatin states Genomic feature type ChIP-seq consolidated ChromHMM track_description version=2018;Original_cell_type=Breast variant Human Mammary Epithelial Cells (vHMEC);schema=BED4;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=no system_category Reproductive life_stage Unknown track_name ROADMAP Epithelial cell ChromHMM consolidated chromatin states (bed4) [Chromatin states]
consolidated • Fibroblast NGRMPBOGSQTOG6 • ROADMAP25693563 ChromHMM Fibroblast Chromatin states Show metadata Download track Track metadata identifier NGRMPBOGSQTOG6 data_source ROADMAP Download track Download number_of_intervals 584,792 bp_covered 2,865,575,419 output_type chromatin states genome_build hg38 cell_type Fibroblast biosample_type Primary cell biosample_term_id CL:0000057 tissue_category Skin encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody consolidated assay ChromHMM file_format bed bed4 file_size 3,442,167 downloaded_date 08/15/2018 release_date 03/30/2018 date_added_to_filer 02/20/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E056_15_coreMarks_hg38lift_mnemonics.bed.gz processed_file_md5 77be9a8cbdab13e21d22bc4b5df8abb2 wget_command wget https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E056_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E056_15_coreMarks_hg38lift_mnemonics.bed.gz.tbi -P GADB/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/all_hg38lift.mnemonics.bedFiles.tgz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/ChromHMM/E056_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/Downloads/ROADMAP/ChromHMM/ raw_file_md5 0dfcd78eee655660a643792476cf8c32 data_category Chromatin states Genomic feature type ChIP-seq consolidated ChromHMM track_description version=2018;Original_cell_type=Foreskin fibroblast Primary Cells skin02;schema=BED4;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=no system_category Integumentary life_stage Unknown track_name ROADMAP Fibroblast ChromHMM consolidated chromatin states (bed4) [Chromatin states]
consolidated • T-cell NGRMPBP5ZRYAD6 • ROADMAP Enhancers25693563 ChromHMM T-cell Enhancer Show metadata Download track Track metadata identifier NGRMPBP5ZRYAD6 data_source ROADMAP_Enhancers Download track Download number_of_intervals 98,286 bp_covered 109,078,480 output_type enhancer chromatin states genome_build hg38 cell_type T-cell biosample_type Primary cell biosample_term_id CL:0000084 tissue_category Blood encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody consolidated assay ChromHMM file_format bed bed4 file_size 653,910 downloaded_date 08/15/2018 release_date 03/30/2018 date_added_to_filer 02/20/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/E034_15_coreMarks_hg38lift_mnemonics_enhancer.bed.gz processed_file_md5 f3f0f19b870021e85ee8c857c9b4d022 wget_command wget https://filer2.niagads.org/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/E034_15_coreMarks_hg38lift_mnemonics_enhancer.bed.gz -P GADB/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/E034_15_coreMarks_hg38lift_mnemonics_enhancer.bed.gz.tbi -P GADB/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/all_hg38lift.mnemonics.bedFiles.tgz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/ChromHMM/E034_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/Downloads/ROADMAP/ChromHMM/ raw_file_md5 1bda65889255f8fc77da2764d8f55aa0 data_category Enhancer Genomic feature type ChromHMM consolidated enhancer chromatin states track_description version=2018;Original_cell_type=Primary T cells from peripheral blood;schema=BED4;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP_Enhancers.html;original_biosample_term_id=Not available;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name ROADMAP_Enhancers T-cell ChromHMM consolidated enhancer chromatin states (bed4) [Enhancer]
consolidated • CD8+ naive T cell NGRMPBTCU3YBJS • ROADMAP25693563 ChromHMM CD8+ naive T cell Chromatin states Show metadata Download track Track metadata identifier NGRMPBTCU3YBJS data_source ROADMAP Download track Download number_of_intervals 305,183 bp_covered 2,865,575,419 output_type chromatin states genome_build hg38 cell_type CD8+ naive T cell biosample_type Primary cell biosample_term_id CL:0000900 tissue_category Blood encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody consolidated assay ChromHMM file_format bed bed4 file_size 1,812,785 downloaded_date 08/15/2018 release_date 03/30/2018 date_added_to_filer 02/20/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E047_15_coreMarks_hg38lift_mnemonics.bed.gz processed_file_md5 4a907f76ae83a4216d18e0b2e8271a76 wget_command wget https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E047_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E047_15_coreMarks_hg38lift_mnemonics.bed.gz.tbi -P GADB/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/all_hg38lift.mnemonics.bedFiles.tgz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/ChromHMM/E047_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/Downloads/ROADMAP/ChromHMM/ raw_file_md5 b60cdff0695abdeea8d2d865abb2d92d data_category Chromatin states Genomic feature type ChIP-seq consolidated ChromHMM track_description version=2018;Original_cell_type=Primary T CD8+ naive cells from peripheral blood;schema=BED4;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name ROADMAP CD8+ naive T cell ChromHMM consolidated chromatin states (bed4) [Chromatin states]
consolidated • CD184+ endoderm cell NGRMPBWYC4SCVC • ROADMAP25693563 ChromHMM CD184+ endoderm cell Chromatin states Show metadata Download track Track metadata identifier NGRMPBWYC4SCVC data_source ROADMAP Download track Download number_of_intervals 586,173 bp_covered 2,865,575,419 output_type chromatin states genome_build hg38 cell_type CD184+ endoderm cell biosample_type In vitro differentiated cells biosample_term_id CL:0000223 tissue_category Stem Cell encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody consolidated assay ChromHMM file_format bed bed4 file_size 3,453,854 downloaded_date 08/15/2018 release_date 03/30/2018 date_added_to_filer 02/20/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E011_15_coreMarks_hg38lift_mnemonics.bed.gz processed_file_md5 b01c22f00b8fbde2f9a581c0032589d3 wget_command wget https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E011_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E011_15_coreMarks_hg38lift_mnemonics.bed.gz.tbi -P GADB/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/all_hg38lift.mnemonics.bedFiles.tgz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/ChromHMM/E011_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/Downloads/ROADMAP/ChromHMM/ raw_file_md5 96a7d7c8ba229cc1cab4af8572fc412b data_category Chromatin states Genomic feature type ChIP-seq consolidated ChromHMM track_description version=2018;Original_cell_type=hESC Derived CD184+ Endoderm Cultured Cells;schema=BED4;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=no system_category Stem Cell life_stage Unknown track_name ROADMAP CD184+ endoderm cell ChromHMM consolidated chromatin states (bed4) [Chromatin states]
consolidated • IMR-90 NGRMPCG75C2GDP • ROADMAP25693563 ChromHMM IMR-90 Chromatin states Show metadata Download track Track metadata identifier NGRMPCG75C2GDP data_source ROADMAP Download track Download number_of_intervals 642,084 bp_covered 2,865,575,419 output_type chromatin states genome_build hg38 cell_type IMR-90 biosample_type Cell line biosample_term_id EFO:0001196 tissue_category Lung encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody consolidated assay ChromHMM file_format bed bed4 file_size 3,787,582 downloaded_date 08/15/2018 release_date 03/30/2018 date_added_to_filer 02/20/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E017_15_coreMarks_hg38lift_mnemonics.bed.gz processed_file_md5 54c721997a08f7c48a39d7e8cd9174c4 wget_command wget https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E017_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E017_15_coreMarks_hg38lift_mnemonics.bed.gz.tbi -P GADB/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/all_hg38lift.mnemonics.bedFiles.tgz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/ChromHMM/E017_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/Downloads/ROADMAP/ChromHMM/ raw_file_md5 4c88bbbcde9ca2f4a56baf5c0919c8d8 data_category Chromatin states Genomic feature type ChIP-seq consolidated ChromHMM track_description version=2018;Original_cell_type=IMR 90 fetal lung fibroblasts Cell Line;schema=BED4;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP.html;original_biosample_term_id=EFO:0001196;is_hg38_lifted=no system_category Respiratory life_stage Fetal track_name ROADMAP IMR-90 ChromHMM consolidated chromatin states (bed4) [Life stage: Fetal] [Chromatin states]
consolidated • Mucosa NGRMPCIRD5WRBK • ROADMAP Enhancers25693563 ChromHMM Mucosa Enhancer Show metadata Download track Track metadata identifier NGRMPCIRD5WRBK data_source ROADMAP_Enhancers Download track Download number_of_intervals 56,804 bp_covered 39,205,596 output_type enhancer chromatin states genome_build hg38 cell_type Mucosa biosample_type Primary tissue biosample_term_id UBERON:0000344 tissue_category Digestive encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody consolidated assay ChromHMM file_format bed bed4 file_size 376,834 downloaded_date 08/15/2018 release_date 03/30/2018 date_added_to_filer 02/20/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/E075_15_coreMarks_hg38lift_mnemonics_enhancer.bed.gz processed_file_md5 1603a9f2a9467cab2a66f606f952fe00 wget_command wget https://filer2.niagads.org/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/E075_15_coreMarks_hg38lift_mnemonics_enhancer.bed.gz -P GADB/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/E075_15_coreMarks_hg38lift_mnemonics_enhancer.bed.gz.tbi -P GADB/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/all_hg38lift.mnemonics.bedFiles.tgz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/ChromHMM/E075_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/Downloads/ROADMAP/ChromHMM/ raw_file_md5 b5bca05793ced4537f7be2d8b0f9cace data_category Enhancer Genomic feature type ChromHMM consolidated enhancer chromatin states track_description version=2018;Original_cell_type=Colonic Mucosa;schema=BED4;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP_Enhancers.html;original_biosample_term_id=Not available;is_hg38_lifted=no system_category Digestive life_stage Unknown track_name ROADMAP_Enhancers Mucosa ChromHMM consolidated enhancer chromatin states (bed4) [Enhancer]
consolidated • Adrenal gland NGRMPCZPBUP3TQ • ROADMAP Enhancers25693563 ChromHMM Adrenal gland Enhancer Show metadata Download track Track metadata identifier NGRMPCZPBUP3TQ data_source ROADMAP_Enhancers Download track Download number_of_intervals 147,653 bp_covered 153,909,102 output_type enhancer chromatin states genome_build hg38 cell_type Adrenal gland biosample_type Primary tissue biosample_term_id UBERON:0002369 tissue_category Endocrine encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody consolidated assay ChromHMM file_format bed bed4 file_size 979,451 downloaded_date 08/15/2018 release_date 03/30/2018 date_added_to_filer 02/20/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/E080_15_coreMarks_hg38lift_mnemonics_enhancer.bed.gz processed_file_md5 68ba8e14489d238734941bccb211f168 wget_command wget https://filer2.niagads.org/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/E080_15_coreMarks_hg38lift_mnemonics_enhancer.bed.gz -P GADB/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/E080_15_coreMarks_hg38lift_mnemonics_enhancer.bed.gz.tbi -P GADB/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/all_hg38lift.mnemonics.bedFiles.tgz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/ChromHMM/E080_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/Downloads/ROADMAP/ChromHMM/ raw_file_md5 a5b0c34c0fd7156652d050506796c918 data_category Enhancer Genomic feature type ChromHMM consolidated enhancer chromatin states track_description version=2018;Original_cell_type=Fetal Adrenal Gland;schema=BED4;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP_Enhancers.html;original_biosample_term_id=Not available;is_hg38_lifted=no system_category Endocrine life_stage Fetal track_name ROADMAP_Enhancers Adrenal gland ChromHMM consolidated enhancer chromatin states (bed4) [Life stage: Fetal] [Enhancer]
consolidated • Melanocyte NGRMPD2XLE45VV • ROADMAP Enhancers25693563 ChromHMM Melanocyte Enhancer Show metadata Download track Track metadata identifier NGRMPD2XLE45VV data_source ROADMAP_Enhancers Download track Download number_of_intervals 133,904 bp_covered 143,326,633 output_type enhancer chromatin states genome_build hg38 cell_type Melanocyte biosample_type Primary cell biosample_term_id CL:0000148 tissue_category Skin encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody consolidated assay ChromHMM file_format bed bed4 file_size 884,799 downloaded_date 08/15/2018 release_date 03/30/2018 date_added_to_filer 02/20/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/E061_15_coreMarks_hg38lift_mnemonics_enhancer.bed.gz processed_file_md5 cc32424cc42a2585443a36b22404e8a6 wget_command wget https://filer2.niagads.org/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/E061_15_coreMarks_hg38lift_mnemonics_enhancer.bed.gz -P GADB/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/E061_15_coreMarks_hg38lift_mnemonics_enhancer.bed.gz.tbi -P GADB/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/all_hg38lift.mnemonics.bedFiles.tgz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/ChromHMM/E061_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/Downloads/ROADMAP/ChromHMM/ raw_file_md5 c6a2ae50d218e9e068262dbe90127fd1 data_category Enhancer Genomic feature type ChromHMM consolidated enhancer chromatin states track_description version=2018;Original_cell_type=Penis foreskin melanocyte Primary Cells skin03;schema=BED4;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP_Enhancers.html;original_biosample_term_id=Not available;is_hg38_lifted=no system_category Integumentary life_stage Unknown track_name ROADMAP_Enhancers Melanocyte ChromHMM consolidated enhancer chromatin states (bed4) [Enhancer]
consolidated • Mesenchymal stem cell NGRMPDAL46EYIC • ROADMAP25693563 ChromHMM Mesenchymal stem cell Chromatin states Show metadata Download track Track metadata identifier NGRMPDAL46EYIC data_source ROADMAP Download track Download number_of_intervals 530,440 bp_covered 2,865,575,419 output_type chromatin states genome_build hg38 cell_type Mesenchymal stem cell biosample_type Stem cell biosample_term_id CL:0000134 tissue_category Connective Tissue encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody consolidated assay ChromHMM file_format bed bed4 file_size 3,131,861 downloaded_date 08/15/2018 release_date 03/30/2018 date_added_to_filer 02/20/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E026_15_coreMarks_hg38lift_mnemonics.bed.gz processed_file_md5 488f047cc45aafaaa3a67fd50cc2f130 wget_command wget https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E026_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E026_15_coreMarks_hg38lift_mnemonics.bed.gz.tbi -P GADB/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/all_hg38lift.mnemonics.bedFiles.tgz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/ChromHMM/E026_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/Downloads/ROADMAP/ChromHMM/ raw_file_md5 3776fc57a971474ec79c7f5ae890490e data_category Chromatin states Genomic feature type ChIP-seq consolidated ChromHMM track_description version=2018;Original_cell_type=Bone Marrow Derived Cultured Mesenchymal Stem Cells;schema=BED4;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=no system_category Skeletal life_stage Unknown track_name ROADMAP Mesenchymal stem cell ChromHMM consolidated chromatin states (bed4) [Chromatin states]
consolidated • Mucosa NGRMPDLYYM2D4S • ROADMAP Enhancers25693563 ChromHMM Mucosa Enhancer Show metadata Download track Track metadata identifier NGRMPDLYYM2D4S data_source ROADMAP_Enhancers Download track Download number_of_intervals 72,201 bp_covered 51,562,097 output_type enhancer chromatin states genome_build hg38 cell_type Mucosa biosample_type Primary tissue biosample_term_id UBERON:0000344 tissue_category Digestive encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody consolidated assay ChromHMM file_format bed bed4 file_size 475,747 downloaded_date 08/15/2018 release_date 03/30/2018 date_added_to_filer 02/20/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/E101_15_coreMarks_hg38lift_mnemonics_enhancer.bed.gz processed_file_md5 5df50571b7dae044b379fb5331d3e744 wget_command wget https://filer2.niagads.org/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/E101_15_coreMarks_hg38lift_mnemonics_enhancer.bed.gz -P GADB/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/E101_15_coreMarks_hg38lift_mnemonics_enhancer.bed.gz.tbi -P GADB/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/all_hg38lift.mnemonics.bedFiles.tgz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/ChromHMM/E101_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/Downloads/ROADMAP/ChromHMM/ raw_file_md5 ea17a53ef10f5a89674c90f8f11be2c4 data_category Enhancer Genomic feature type ChromHMM consolidated enhancer chromatin states track_description version=2018;Original_cell_type=Mucosa of rectum;schema=BED4;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP_Enhancers.html;original_biosample_term_id=Not available;is_hg38_lifted=no system_category Digestive life_stage Unknown track_name ROADMAP_Enhancers Mucosa ChromHMM consolidated enhancer chromatin states (bed4) [Enhancer]
consolidated • T-helper naive cell NGRMPDSHHG22Y4 • ROADMAP25693563 ChromHMM T-helper naive cell Chromatin states Show metadata Download track Track metadata identifier NGRMPDSHHG22Y4 data_source ROADMAP Download track Download number_of_intervals 349,838 bp_covered 2,865,575,419 output_type chromatin states genome_build hg38 cell_type T-helper naive cell biosample_type Primary cell biosample_term_id CL:0000895 tissue_category Blood encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody consolidated assay ChromHMM file_format bed bed4 file_size 2,078,652 downloaded_date 08/15/2018 release_date 03/30/2018 date_added_to_filer 02/20/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E039_15_coreMarks_hg38lift_mnemonics.bed.gz processed_file_md5 241e95fee6884ed0595cf3d2c52ddd76 wget_command wget https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E039_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E039_15_coreMarks_hg38lift_mnemonics.bed.gz.tbi -P GADB/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/all_hg38lift.mnemonics.bedFiles.tgz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/ChromHMM/E039_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/Downloads/ROADMAP/ChromHMM/ raw_file_md5 b416a04bb749e5a41ea1b5d6a976c7f3 data_category Chromatin states Genomic feature type ChIP-seq consolidated ChromHMM track_description version=2018;Original_cell_type=CD4+ CD25- CD45RA+ Primary T helper naive cells from peripheral blood;schema=BED4;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name ROADMAP T-helper naive cell ChromHMM consolidated chromatin states (bed4) [Chromatin states]
consolidated • Hematopoietic stem cell NGRMPDV6SPOOHO • ROADMAP Enhancers25693563 ChromHMM Hematopoietic stem cell Enhancer Show metadata Download track Track metadata identifier NGRMPDV6SPOOHO data_source ROADMAP_Enhancers Download track Download number_of_intervals 113,441 bp_covered 120,344,989 output_type enhancer chromatin states genome_build hg38 cell_type Hematopoietic stem cell biosample_type Stem cell biosample_term_id CL:0000037 tissue_category Stem Cell encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody consolidated assay ChromHMM file_format bed bed4 file_size 748,255 downloaded_date 08/15/2018 release_date 03/30/2018 date_added_to_filer 02/20/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/E036_15_coreMarks_hg38lift_mnemonics_enhancer.bed.gz processed_file_md5 6a6bd752c3a32c956316f93ab784385a wget_command wget https://filer2.niagads.org/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/E036_15_coreMarks_hg38lift_mnemonics_enhancer.bed.gz -P GADB/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/E036_15_coreMarks_hg38lift_mnemonics_enhancer.bed.gz.tbi -P GADB/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/all_hg38lift.mnemonics.bedFiles.tgz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/ChromHMM/E036_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/Downloads/ROADMAP/ChromHMM/ raw_file_md5 e418e8475768ff656e45bdc19c165aa7 data_category Enhancer Genomic feature type ChromHMM consolidated enhancer chromatin states track_description version=2018;Original_cell_type=Primary hematopoietic stem cells short term culture;schema=BED4;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP_Enhancers.html;original_biosample_term_id=Not available;is_hg38_lifted=no system_category Stem Cell life_stage Unknown track_name ROADMAP_Enhancers Hematopoietic stem cell ChromHMM consolidated enhancer chromatin states (bed4) [Enhancer]
consolidated • Muscle NGRMPDXJPN5PGZ • ROADMAP Enhancers25693563 ChromHMM Muscle Enhancer Show metadata Download track Track metadata identifier NGRMPDXJPN5PGZ data_source ROADMAP_Enhancers Download track Download number_of_intervals 127,616 bp_covered 119,512,261 output_type enhancer chromatin states genome_build hg38 cell_type Muscle biosample_type Primary tissue biosample_term_id NCIT:C13056 tissue_category Skeletal Muscle encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody consolidated assay ChromHMM file_format bed bed4 file_size 836,435 downloaded_date 08/15/2018 release_date 03/30/2018 date_added_to_filer 02/20/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/E089_15_coreMarks_hg38lift_mnemonics_enhancer.bed.gz processed_file_md5 e5015622f64f38c9deb2beca17e5e5ca wget_command wget https://filer2.niagads.org/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/E089_15_coreMarks_hg38lift_mnemonics_enhancer.bed.gz -P GADB/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/E089_15_coreMarks_hg38lift_mnemonics_enhancer.bed.gz.tbi -P GADB/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/all_hg38lift.mnemonics.bedFiles.tgz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/ChromHMM/E089_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/Downloads/ROADMAP/ChromHMM/ raw_file_md5 70685fc07927ff32158957ec409e1ab1 data_category Enhancer Genomic feature type ChromHMM consolidated enhancer chromatin states track_description version=2018;Original_cell_type=Fetal Muscle Trunk;schema=BED4;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP_Enhancers.html;original_biosample_term_id=Not available;is_hg38_lifted=no system_category Muscular life_stage Fetal track_name ROADMAP_Enhancers Muscle ChromHMM consolidated enhancer chromatin states (bed4) [Life stage: Fetal] [Enhancer]
consolidated • Heart NGRMPE5GWM5PI2 • ROADMAP25693563 ChromHMM Heart Chromatin states Show metadata Download track Track metadata identifier NGRMPE5GWM5PI2 data_source ROADMAP Download track Download number_of_intervals 394,972 bp_covered 2,865,575,419 output_type chromatin states genome_build hg38 cell_type Heart biosample_type Primary tissue biosample_term_id NCIT:C12727 tissue_category Heart encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody consolidated assay ChromHMM file_format bed bed4 file_size 2,297,308 downloaded_date 08/15/2018 release_date 03/30/2018 date_added_to_filer 02/20/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E083_15_coreMarks_hg38lift_mnemonics.bed.gz processed_file_md5 8f329b2c6cec517b49fa641febfca1a4 wget_command wget https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E083_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E083_15_coreMarks_hg38lift_mnemonics.bed.gz.tbi -P GADB/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/all_hg38lift.mnemonics.bedFiles.tgz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/ChromHMM/E083_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/Downloads/ROADMAP/ChromHMM/ raw_file_md5 445ef825de98f9cd7652aec66fac15be data_category Chromatin states Genomic feature type ChIP-seq consolidated ChromHMM track_description version=2018;Original_cell_type=Fetal Heart;schema=BED4;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=no system_category Cardiovascular life_stage Fetal track_name ROADMAP Heart ChromHMM consolidated chromatin states (bed4) [Life stage: Fetal] [Chromatin states]
consolidated • Lung NGRMPE7IL3DB7S • ROADMAP25693563 ChromHMM Lung Chromatin states Show metadata Download track Track metadata identifier NGRMPE7IL3DB7S data_source ROADMAP Download track Download number_of_intervals 490,961 bp_covered 2,865,575,419 output_type chromatin states genome_build hg38 cell_type Lung biosample_type Primary tissue biosample_term_id UBERON:0002048 tissue_category Lung encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody consolidated assay ChromHMM file_format bed bed4 file_size 2,852,219 downloaded_date 08/15/2018 release_date 03/30/2018 date_added_to_filer 02/20/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E096_15_coreMarks_hg38lift_mnemonics.bed.gz processed_file_md5 bbfdf2681cc519f6c798233de8ad3c06 wget_command wget https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E096_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E096_15_coreMarks_hg38lift_mnemonics.bed.gz.tbi -P GADB/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/all_hg38lift.mnemonics.bedFiles.tgz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/ChromHMM/E096_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/Downloads/ROADMAP/ChromHMM/ raw_file_md5 54ae385d38dd94642e4f801ec919c318 data_category Chromatin states Genomic feature type ChIP-seq consolidated ChromHMM track_description version=2018;Original_cell_type=Lung;schema=BED4;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=no system_category Respiratory life_stage Unknown track_name ROADMAP Lung ChromHMM consolidated chromatin states (bed4) [Chromatin states]
consolidated • Placenta amnion NGRMPEM3GPSNR2 • ROADMAP25693563 ChromHMM Placenta amnion Chromatin states Show metadata Download track Track metadata identifier NGRMPEM3GPSNR2 data_source ROADMAP Download track Download number_of_intervals 272,481 bp_covered 2,865,575,419 output_type chromatin states genome_build hg38 cell_type Placenta amnion biosample_type Primary tissue biosample_term_id UBERON:0000305 tissue_category Placenta encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody consolidated assay ChromHMM file_format bed bed4 file_size 1,594,268 downloaded_date 08/15/2018 release_date 03/30/2018 date_added_to_filer 02/20/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E099_15_coreMarks_hg38lift_mnemonics.bed.gz processed_file_md5 98805ccd2340bc3066eca9f98a618927 wget_command wget https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E099_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E099_15_coreMarks_hg38lift_mnemonics.bed.gz.tbi -P GADB/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/all_hg38lift.mnemonics.bedFiles.tgz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/ChromHMM/E099_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/Downloads/ROADMAP/ChromHMM/ raw_file_md5 d678f8e91b91d124717e42cbdf3e9672 data_category Chromatin states Genomic feature type ChIP-seq consolidated ChromHMM track_description version=2018;Original_cell_type=Placenta Amnion;schema=BED4;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=no system_category Placental life_stage Unknown track_name ROADMAP Placenta amnion ChromHMM consolidated chromatin states (bed4) [Chromatin states]
consolidated • Placenta NGRMPEOFK5P5ZA • ROADMAP25693563 ChromHMM Placenta Chromatin states Show metadata Download track Track metadata identifier NGRMPEOFK5P5ZA data_source ROADMAP Download track Download number_of_intervals 500,175 bp_covered 2,865,575,419 output_type chromatin states genome_build hg38 cell_type Placenta biosample_type Primary tissue biosample_term_id UBERON:0001987 tissue_category Placenta encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody consolidated assay ChromHMM file_format bed bed4 file_size 2,929,962 downloaded_date 08/15/2018 release_date 03/30/2018 date_added_to_filer 02/20/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E091_15_coreMarks_hg38lift_mnemonics.bed.gz processed_file_md5 efc2217a7323542f1a3e32d46615c447 wget_command wget https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E091_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E091_15_coreMarks_hg38lift_mnemonics.bed.gz.tbi -P GADB/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/all_hg38lift.mnemonics.bedFiles.tgz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/ChromHMM/E091_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/Downloads/ROADMAP/ChromHMM/ raw_file_md5 deb1b0e8d7b774fd2378eae47979bbaa data_category Chromatin states Genomic feature type ChIP-seq consolidated ChromHMM track_description version=2018;Original_cell_type=Placenta;schema=BED4;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=no system_category Placental life_stage Unknown track_name ROADMAP Placenta ChromHMM consolidated chromatin states (bed4) [Chromatin states]
consolidated • Myotube NGRMPEQOE3JBOO • ROADMAP25693563 ChromHMM Myotube Chromatin states Show metadata Download track Track metadata identifier NGRMPEQOE3JBOO data_source ROADMAP Download track Download number_of_intervals 475,596 bp_covered 2,865,575,419 output_type chromatin states genome_build hg38 cell_type Myotube biosample_type In vitro differentiated cells biosample_term_id CL:0002372 tissue_category Skeletal Muscle encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody consolidated assay ChromHMM file_format bed bed4 file_size 2,816,031 downloaded_date 08/15/2018 release_date 03/30/2018 date_added_to_filer 02/20/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E121_15_coreMarks_hg38lift_mnemonics.bed.gz processed_file_md5 e64ca439d50cffac2941d64d26dfa6b7 wget_command wget https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E121_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E121_15_coreMarks_hg38lift_mnemonics.bed.gz.tbi -P GADB/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/all_hg38lift.mnemonics.bedFiles.tgz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/ChromHMM/E121_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/Downloads/ROADMAP/ChromHMM/ raw_file_md5 cbaa24bbf2f18381800e3423ad8fb6f1 data_category Chromatin states Genomic feature type ChIP-seq consolidated ChromHMM track_description version=2018;Original_cell_type=HSMM cell derived Skeletal Muscle Myotubes Cells;schema=BED4;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=no system_category Muscular life_stage Unknown track_name ROADMAP Myotube ChromHMM consolidated chromatin states (bed4) [Chromatin states]
consolidated • T cell effector/memory NGRMPERBYMSWAH • ROADMAP25693563 ChromHMM T cell effector/memory Chromatin states Show metadata Download track Track metadata identifier NGRMPERBYMSWAH data_source ROADMAP Download track Download number_of_intervals 278,599 bp_covered 2,865,575,419 output_type chromatin states genome_build hg38 cell_type T cell effector/memory biosample_type Primary cell biosample_term_id CL:0000813 tissue_category Blood encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody consolidated assay ChromHMM file_format bed bed4 file_size 1,657,267 downloaded_date 08/15/2018 release_date 03/30/2018 date_added_to_filer 02/20/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E045_15_coreMarks_hg38lift_mnemonics.bed.gz processed_file_md5 904c429725a91496b8c25e95f7fd39d7 wget_command wget https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E045_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E045_15_coreMarks_hg38lift_mnemonics.bed.gz.tbi -P GADB/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/all_hg38lift.mnemonics.bedFiles.tgz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/ChromHMM/E045_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/Downloads/ROADMAP/ChromHMM/ raw_file_md5 840132bcf5fb0e67e129c3463733027e data_category Chromatin states Genomic feature type ChIP-seq consolidated ChromHMM track_description version=2018;Original_cell_type=Primary T cells effector/memory enriched from peripheral blood;schema=BED4;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name ROADMAP T cell effector/memory ChromHMM consolidated chromatin states (bed4) [Chromatin states]