consolidated • Mesenchymal stem cell NGRMPJLPLWEL76 • ROADMAP25693563 ChromHMM Mesenchymal stem cell Chromatin states Show metadata Download track Track metadata identifier NGRMPJLPLWEL76 data_source ROADMAP Download track Download number_of_intervals 544,453 bp_covered 2,865,575,419 output_type chromatin states genome_build hg38 cell_type Mesenchymal stem cell biosample_type Stem cell biosample_term_id CL:0000134 tissue_category Connective Tissue encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody consolidated assay ChromHMM file_format bed bed4 file_size 3,200,820 downloaded_date 08/15/2018 release_date 03/30/2018 date_added_to_filer 02/20/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E006_15_coreMarks_hg38lift_mnemonics.bed.gz processed_file_md5 1f14295d5b27026cc5b6ac080dbbc701 wget_command wget https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E006_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E006_15_coreMarks_hg38lift_mnemonics.bed.gz.tbi -P GADB/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/all_hg38lift.mnemonics.bedFiles.tgz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/ChromHMM/E006_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/Downloads/ROADMAP/ChromHMM/ raw_file_md5 14ac1e7a0bc3b66449071e363d511692 data_category Chromatin states Genomic feature type ChIP-seq consolidated ChromHMM track_description version=2018;Original_cell_type=H1 Derived Mesenchymal Stem Cells;schema=BED4;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=no system_category Skeletal life_stage Embryonic track_name ROADMAP Mesenchymal stem cell ChromHMM consolidated chromatin states (bed4) [Life stage: Embryonic] [Chromatin states]
consolidated • Neuronal progenitor cell NGRMPJOCUKBNGW • ROADMAP25693563 ChromHMM Neuronal progenitor cell Chromatin states Show metadata Download track Track metadata identifier NGRMPJOCUKBNGW data_source ROADMAP Download track Download number_of_intervals 444,828 bp_covered 2,865,575,419 output_type chromatin states genome_build hg38 cell_type Neuronal progenitor cell biosample_type In vitro differentiated cells biosample_term_id CL:0000047 tissue_category Brain encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody consolidated assay ChromHMM file_format bed bed4 file_size 2,651,425 downloaded_date 08/15/2018 release_date 03/30/2018 date_added_to_filer 02/20/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E009_15_coreMarks_hg38lift_mnemonics.bed.gz processed_file_md5 37c2f3735d55cfbe0254ab2670091910 wget_command wget https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E009_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E009_15_coreMarks_hg38lift_mnemonics.bed.gz.tbi -P GADB/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/all_hg38lift.mnemonics.bedFiles.tgz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/ChromHMM/E009_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/Downloads/ROADMAP/ChromHMM/ raw_file_md5 4b8c9058606f88dae3cf8fe5aedc93ba data_category Chromatin states Genomic feature type ChIP-seq consolidated ChromHMM track_description version=2018;Original_cell_type=H9 Derived Neuronal Progenitor Cultured Cells;schema=BED4;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=no system_category Nervous life_stage Embryonic track_name ROADMAP Neuronal progenitor cell ChromHMM consolidated chromatin states (bed4) [Life stage: Embryonic] [Chromatin states]
consolidated • Small intestine NGRMPJPEWQYEG5 • ROADMAP Enhancers25693563 ChromHMM Small intestine Enhancer Show metadata Download track Track metadata identifier NGRMPJPEWQYEG5 data_source ROADMAP_Enhancers Download track Download number_of_intervals 105,925 bp_covered 120,688,124 output_type enhancer chromatin states genome_build hg38 cell_type Small intestine biosample_type Primary tissue biosample_term_id UBERON:0002108 tissue_category Digestive encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody consolidated assay ChromHMM file_format bed bed4 file_size 702,362 downloaded_date 08/15/2018 release_date 03/30/2018 date_added_to_filer 02/20/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/E085_15_coreMarks_hg38lift_mnemonics_enhancer.bed.gz processed_file_md5 bad31ce4ef4e709050c079a05c0b3a67 wget_command wget https://filer2.niagads.org/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/E085_15_coreMarks_hg38lift_mnemonics_enhancer.bed.gz -P GADB/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/E085_15_coreMarks_hg38lift_mnemonics_enhancer.bed.gz.tbi -P GADB/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/all_hg38lift.mnemonics.bedFiles.tgz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/ChromHMM/E085_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/Downloads/ROADMAP/ChromHMM/ raw_file_md5 eb8b34ace0c8bfa4d14fd23f6fac9521 data_category Enhancer Genomic feature type ChromHMM consolidated enhancer chromatin states track_description version=2018;Original_cell_type=Fetal Intestine Small;schema=BED4;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP_Enhancers.html;original_biosample_term_id=Not available;is_hg38_lifted=no system_category Digestive life_stage Fetal track_name ROADMAP_Enhancers Small intestine ChromHMM consolidated enhancer chromatin states (bed4) [Life stage: Fetal] [Enhancer]
consolidated • B cell NGRMPJPVQOQUCE • ROADMAP Enhancers25693563 ChromHMM B cell Enhancer Show metadata Download track Track metadata identifier NGRMPJPVQOQUCE data_source ROADMAP_Enhancers Download track Download number_of_intervals 98,023 bp_covered 122,249,218 output_type enhancer chromatin states genome_build hg38 cell_type B cell biosample_type Primary cell biosample_term_id CL:0000236 tissue_category Blood encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody consolidated assay ChromHMM file_format bed bed4 file_size 650,861 downloaded_date 08/15/2018 release_date 03/30/2018 date_added_to_filer 02/20/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/E032_15_coreMarks_hg38lift_mnemonics_enhancer.bed.gz processed_file_md5 fa9eaea7a4af7a0df42b5a02afbb4686 wget_command wget https://filer2.niagads.org/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/E032_15_coreMarks_hg38lift_mnemonics_enhancer.bed.gz -P GADB/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/E032_15_coreMarks_hg38lift_mnemonics_enhancer.bed.gz.tbi -P GADB/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/all_hg38lift.mnemonics.bedFiles.tgz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/ChromHMM/E032_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/Downloads/ROADMAP/ChromHMM/ raw_file_md5 9ea952c7daebb2a9d4c8a2cdb1ab3a52 data_category Enhancer Genomic feature type ChromHMM consolidated enhancer chromatin states track_description version=2018;Original_cell_type=Primary B cells from peripheral blood;schema=BED4;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP_Enhancers.html;original_biosample_term_id=Not available;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name ROADMAP_Enhancers B cell ChromHMM consolidated enhancer chromatin states (bed4) [Enhancer]
consolidated • HSMM NGRMPJSHMFJKO6 • ROADMAP Enhancers25693563 ChromHMM HSMM Enhancer Show metadata Download track Track metadata identifier NGRMPJSHMFJKO6 data_source ROADMAP_Enhancers Download track Download number_of_intervals 106,345 bp_covered 105,122,176 output_type enhancer chromatin states genome_build hg38 cell_type HSMM biosample_type In vitro differentiated cells biosample_term_id CL:0000515 tissue_category Skeletal Muscle encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody consolidated assay ChromHMM file_format bed bed4 file_size 697,058 downloaded_date 08/15/2018 release_date 03/30/2018 date_added_to_filer 02/20/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/E120_15_coreMarks_hg38lift_mnemonics_enhancer.bed.gz processed_file_md5 ae5fa7b873f06f7b551d5f349fbea5df wget_command wget https://filer2.niagads.org/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/E120_15_coreMarks_hg38lift_mnemonics_enhancer.bed.gz -P GADB/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/E120_15_coreMarks_hg38lift_mnemonics_enhancer.bed.gz.tbi -P GADB/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/all_hg38lift.mnemonics.bedFiles.tgz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/ChromHMM/E120_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/Downloads/ROADMAP/ChromHMM/ raw_file_md5 d7ee8ec486ceb902478a100522c68bea data_category Enhancer Genomic feature type ChromHMM consolidated enhancer chromatin states track_description version=2018;Original_cell_type=HSMM Skeletal Muscle Myoblasts Cells;schema=BED4;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP_Enhancers.html;original_biosample_term_id=Not available;is_hg38_lifted=no system_category Muscular life_stage Unknown track_name ROADMAP_Enhancers HSMM ChromHMM consolidated enhancer chromatin states (bed4) [Enhancer]
consolidated • ES-WA7 NGRMPJTMZ6HQW6 • ROADMAP25693563 ChromHMM ES-WA7 Chromatin states Show metadata Download track Track metadata identifier NGRMPJTMZ6HQW6 data_source ROADMAP Download track Download number_of_intervals 281,838 bp_covered 2,865,575,419 output_type chromatin states genome_build hg38 cell_type ES-WA7 biosample_type Stem cell biosample_term_id CL:0002322 tissue_category Embryo encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody consolidated assay ChromHMM file_format bed bed4 file_size 1,666,301 downloaded_date 08/15/2018 release_date 03/30/2018 date_added_to_filer 02/20/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E002_15_coreMarks_hg38lift_mnemonics.bed.gz processed_file_md5 3f0cc61f7dc4c7c89d6544e854eb4ed5 wget_command wget https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E002_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E002_15_coreMarks_hg38lift_mnemonics.bed.gz.tbi -P GADB/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/all_hg38lift.mnemonics.bedFiles.tgz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/ChromHMM/E002_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/Downloads/ROADMAP/ChromHMM/ raw_file_md5 91ba80b10c4e93fb404f180ace569ead data_category Chromatin states Genomic feature type ChIP-seq consolidated ChromHMM track_description version=2018;Original_cell_type=ES-WA7 Cells;schema=BED4;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=no system_category Embryo life_stage Embryonic track_name ROADMAP ES-WA7 ChromHMM consolidated chromatin states (bed4) [Life stage: Embryonic] [Chromatin states]
consolidated • Neurosphere NGRMPJYI4HZKBE • ROADMAP Enhancers25693563 ChromHMM Neurosphere Enhancer Show metadata Download track Track metadata identifier NGRMPJYI4HZKBE data_source ROADMAP_Enhancers Download track Download number_of_intervals 105,626 bp_covered 89,423,730 output_type enhancer chromatin states genome_build hg38 cell_type Neurosphere biosample_type Stem cell biosample_term_id NCIT:C172261 tissue_category Stem Cell encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody consolidated assay ChromHMM file_format bed bed4 file_size 696,231 downloaded_date 08/15/2018 release_date 03/30/2018 date_added_to_filer 02/20/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/E054_15_coreMarks_hg38lift_mnemonics_enhancer.bed.gz processed_file_md5 2ed646fe48f0fe639c4bdeb6012f16bd wget_command wget https://filer2.niagads.org/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/E054_15_coreMarks_hg38lift_mnemonics_enhancer.bed.gz -P GADB/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/E054_15_coreMarks_hg38lift_mnemonics_enhancer.bed.gz.tbi -P GADB/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/all_hg38lift.mnemonics.bedFiles.tgz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/ChromHMM/E054_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/Downloads/ROADMAP/ChromHMM/ raw_file_md5 04a6c6d1a55195add6f6a32145ca3591 data_category Enhancer Genomic feature type ChromHMM consolidated enhancer chromatin states track_description version=2018;Original_cell_type=Ganglion Eminence derived primary cultured neurospheres;schema=BED4;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP_Enhancers.html;original_biosample_term_id=NTR:0000427;is_hg38_lifted=no system_category Stem Cell life_stage Embryonic track_name ROADMAP_Enhancers Neurosphere ChromHMM consolidated enhancer chromatin states (bed4) [Life stage: Embryonic] [Enhancer]
consolidated • Adipose NGRMPK66FC2SDY • ROADMAP25693563 ChromHMM Adipose Chromatin states Show metadata Download track Track metadata identifier NGRMPK66FC2SDY data_source ROADMAP Download track Download number_of_intervals 555,611 bp_covered 2,865,575,419 output_type chromatin states genome_build hg38 cell_type Adipose biosample_type Primary tissue biosample_term_id NCIT:C12472 tissue_category Adipose encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody consolidated assay ChromHMM file_format bed bed4 file_size 3,274,992 downloaded_date 08/15/2018 release_date 03/30/2018 date_added_to_filer 02/20/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E063_15_coreMarks_hg38lift_mnemonics.bed.gz processed_file_md5 e07ed4cd26afcc9ede04cbe08f42706d wget_command wget https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E063_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E063_15_coreMarks_hg38lift_mnemonics.bed.gz.tbi -P GADB/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/all_hg38lift.mnemonics.bedFiles.tgz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/ChromHMM/E063_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/Downloads/ROADMAP/ChromHMM/ raw_file_md5 eb60de000204228bcc420fa4136f09be data_category Chromatin states Genomic feature type ChIP-seq consolidated ChromHMM track_description version=2018;Original_cell_type=Adipose Nuclei;schema=BED4;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=no system_category Integumentary life_stage Unknown track_name ROADMAP Adipose ChromHMM consolidated chromatin states (bed4) [Chromatin states]
consolidated • Hematopoietic stem cell NGRMPKK5GCTH5I • ROADMAP25693563 ChromHMM Hematopoietic stem cell Chromatin states Show metadata Download track Track metadata identifier NGRMPKK5GCTH5I data_source ROADMAP Download track Download number_of_intervals 491,608 bp_covered 2,865,575,419 output_type chromatin states genome_build hg38 cell_type Hematopoietic stem cell biosample_type Stem cell biosample_term_id CL:0000037 tissue_category Stem Cell encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody consolidated assay ChromHMM file_format bed bed4 file_size 2,919,140 downloaded_date 08/15/2018 release_date 03/30/2018 date_added_to_filer 02/20/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E050_15_coreMarks_hg38lift_mnemonics.bed.gz processed_file_md5 c1f1edbc88e47e420b699ef2733d5b84 wget_command wget https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E050_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E050_15_coreMarks_hg38lift_mnemonics.bed.gz.tbi -P GADB/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/all_hg38lift.mnemonics.bedFiles.tgz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/ChromHMM/E050_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/Downloads/ROADMAP/ChromHMM/ raw_file_md5 99746c67dc50ee46e020bb74e3b29571 data_category Chromatin states Genomic feature type ChIP-seq consolidated ChromHMM track_description version=2018;Original_cell_type=Primary hematopoietic stem cells G-CSF-mobilized Female;schema=BED4;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=no system_category Stem Cell life_stage Unknown track_name ROADMAP Hematopoietic stem cell ChromHMM consolidated chromatin states (bed4) [Chromatin states]
consolidated • Germinal matrix NGRMPKKDVNMS6D • ROADMAP25693563 ChromHMM Germinal matrix Chromatin states Show metadata Download track Track metadata identifier NGRMPKKDVNMS6D data_source ROADMAP Download track Download number_of_intervals 417,174 bp_covered 2,865,575,419 output_type chromatin states genome_build hg38 cell_type Germinal matrix biosample_type Primary tissue biosample_term_id Not available tissue_category Brain encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody consolidated assay ChromHMM file_format bed bed4 file_size 2,466,337 downloaded_date 08/15/2018 release_date 03/30/2018 date_added_to_filer 02/20/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E070_15_coreMarks_hg38lift_mnemonics.bed.gz processed_file_md5 10c5ebc67f23236058d3e87d3617efa2 wget_command wget https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E070_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E070_15_coreMarks_hg38lift_mnemonics.bed.gz.tbi -P GADB/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/all_hg38lift.mnemonics.bedFiles.tgz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/ChromHMM/E070_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/Downloads/ROADMAP/ChromHMM/ raw_file_md5 bd233c52718fc7c448fc637ef629e559 data_category Chromatin states Genomic feature type ChIP-seq consolidated ChromHMM track_description version=2018;Original_cell_type=Brain Germinal Matrix;schema=BED4;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP.html;original_biosample_term_id=NTR:0001407;is_hg38_lifted=no system_category Nervous life_stage Unknown track_name ROADMAP Germinal matrix ChromHMM consolidated chromatin states (bed4) [Chromatin states]
consolidated • Thymus NGRMPL5MFK4VP3 • ROADMAP25693563 ChromHMM Thymus Chromatin states Show metadata Download track Track metadata identifier NGRMPL5MFK4VP3 data_source ROADMAP Download track Download number_of_intervals 330,109 bp_covered 2,865,575,419 output_type chromatin states genome_build hg38 cell_type Thymus biosample_type Primary tissue biosample_term_id UBERON:0002370 tissue_category Immune Organ encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody consolidated assay ChromHMM file_format bed bed4 file_size 1,970,958 downloaded_date 08/15/2018 release_date 03/30/2018 date_added_to_filer 02/20/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E112_15_coreMarks_hg38lift_mnemonics.bed.gz processed_file_md5 974aa4a00b157479f23eedbcd30f3495 wget_command wget https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E112_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E112_15_coreMarks_hg38lift_mnemonics.bed.gz.tbi -P GADB/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/all_hg38lift.mnemonics.bedFiles.tgz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/ChromHMM/E112_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/Downloads/ROADMAP/ChromHMM/ raw_file_md5 5dfa7084c9dd13ec9a3b27145d6bd147 data_category Chromatin states Genomic feature type ChIP-seq consolidated ChromHMM track_description version=2018;Original_cell_type=Thymus;schema=BED4;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=no system_category Lymphatic life_stage Unknown track_name ROADMAP Thymus ChromHMM consolidated chromatin states (bed4) [Chromatin states]
consolidated • T-helper 17 cell NGRMPL7MI7RTBS • ROADMAP Enhancers25693563 ChromHMM T-helper 17 cell Enhancer Show metadata Download track Track metadata identifier NGRMPL7MI7RTBS data_source ROADMAP_Enhancers Download track Download number_of_intervals 85,647 bp_covered 88,670,404 output_type enhancer chromatin states genome_build hg38 cell_type T-helper 17 cell biosample_type Primary cell biosample_term_id CL:0000899 tissue_category Blood encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody consolidated assay ChromHMM file_format bed bed4 file_size 560,977 downloaded_date 08/15/2018 release_date 03/30/2018 date_added_to_filer 02/20/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/E042_15_coreMarks_hg38lift_mnemonics_enhancer.bed.gz processed_file_md5 e4cbb080681d7f5a8cd7635a952c3f12 wget_command wget https://filer2.niagads.org/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/E042_15_coreMarks_hg38lift_mnemonics_enhancer.bed.gz -P GADB/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/E042_15_coreMarks_hg38lift_mnemonics_enhancer.bed.gz.tbi -P GADB/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/all_hg38lift.mnemonics.bedFiles.tgz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/ChromHMM/E042_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/Downloads/ROADMAP/ChromHMM/ raw_file_md5 3bd7fdd643350e8ad6fcd6fda255a931 data_category Enhancer Genomic feature type ChromHMM consolidated enhancer chromatin states track_description version=2018;Original_cell_type=Primary T helper 17 cells PMA-I stimulated;schema=BED4;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP_Enhancers.html;original_biosample_term_id=Not available;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name ROADMAP_Enhancers T-helper 17 cell ChromHMM consolidated enhancer chromatin states (bed4) [Enhancer]
consolidated • Natural killer cell NGRMPLDNZZ6FST • ROADMAP Enhancers25693563 ChromHMM Natural killer cell Enhancer Show metadata Download track Track metadata identifier NGRMPLDNZZ6FST data_source ROADMAP_Enhancers Download track Download number_of_intervals 92,096 bp_covered 104,782,087 output_type enhancer chromatin states genome_build hg38 cell_type Natural killer cell biosample_type Primary cell biosample_term_id CL:0000623 tissue_category Blood encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody consolidated assay ChromHMM file_format bed bed4 file_size 611,032 downloaded_date 08/15/2018 release_date 03/30/2018 date_added_to_filer 02/20/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/E046_15_coreMarks_hg38lift_mnemonics_enhancer.bed.gz processed_file_md5 a82358776374baf630edc423ea802783 wget_command wget https://filer2.niagads.org/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/E046_15_coreMarks_hg38lift_mnemonics_enhancer.bed.gz -P GADB/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/E046_15_coreMarks_hg38lift_mnemonics_enhancer.bed.gz.tbi -P GADB/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/all_hg38lift.mnemonics.bedFiles.tgz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/ChromHMM/E046_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/Downloads/ROADMAP/ChromHMM/ raw_file_md5 147bbe528bf8bed7d4cce56ff6845767 data_category Enhancer Genomic feature type ChromHMM consolidated enhancer chromatin states track_description version=2018;Original_cell_type=Primary Natural Killer cells from peripheral blood;schema=BED4;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP_Enhancers.html;original_biosample_term_id=Not available;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name ROADMAP_Enhancers Natural killer cell ChromHMM consolidated enhancer chromatin states (bed4) [Enhancer]
consolidated • NHEK NGRMPLETZHHPYO • ROADMAP25693563 ChromHMM NHEK Chromatin states Show metadata Download track Track metadata identifier NGRMPLETZHHPYO data_source ROADMAP Download track Download number_of_intervals 526,113 bp_covered 2,839,992,423 output_type chromatin states genome_build hg38 cell_type NHEK biosample_type Primary culture biosample_term_id EFO:0002799 tissue_category Skin encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody consolidated assay ChromHMM file_format bed bed4 file_size 3,100,818 downloaded_date 08/15/2018 release_date 03/30/2018 date_added_to_filer 02/20/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E127_15_coreMarks_hg38lift_mnemonics.bed.gz processed_file_md5 9c403b1604210c57fc58a7ab4b6d2079 wget_command wget https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E127_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E127_15_coreMarks_hg38lift_mnemonics.bed.gz.tbi -P GADB/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/all_hg38lift.mnemonics.bedFiles.tgz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/ChromHMM/E127_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/Downloads/ROADMAP/ChromHMM/ raw_file_md5 cd56ea516340709bdd7013c59828a069 data_category Chromatin states Genomic feature type ChIP-seq consolidated ChromHMM track_description version=2018;Original_cell_type=NHEK-Epidermal Keratinocyte Primary Cells;schema=BED4;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=no system_category Integumentary life_stage Unknown track_name ROADMAP NHEK ChromHMM consolidated chromatin states (bed4) [Chromatin states]
consolidated • A549 NGRMPLFB7VDU7L • ROADMAP25693563 ChromHMM A549 Chromatin states Show metadata Download track Track metadata identifier NGRMPLFB7VDU7L data_source ROADMAP Download track Download number_of_intervals 471,019 bp_covered 2,865,575,419 output_type chromatin states genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody consolidated assay ChromHMM file_format bed bed4 file_size 2,788,478 downloaded_date 08/15/2018 release_date 03/30/2018 date_added_to_filer 02/20/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E114_15_coreMarks_hg38lift_mnemonics.bed.gz processed_file_md5 66c3287c2ed993a1a46b16a1c386992b wget_command wget https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E114_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E114_15_coreMarks_hg38lift_mnemonics.bed.gz.tbi -P GADB/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/all_hg38lift.mnemonics.bedFiles.tgz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/ChromHMM/E114_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/Downloads/ROADMAP/ChromHMM/ raw_file_md5 689201f0a2c9d080c4e14fd84e9762ee data_category Chromatin states Genomic feature type ChIP-seq consolidated ChromHMM track_description version=2018;Original_cell_type=A549 EtOH 0.02pct Lung Carcinoma Cell Line;schema=BED4;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=no system_category Respiratory life_stage Unknown track_name ROADMAP A549 ChromHMM consolidated chromatin states (bed4) [Chromatin states]
consolidated • T-helper memory cell NGRMPLFEMP3WES • ROADMAP Enhancers25693563 ChromHMM T-helper memory cell Enhancer Show metadata Download track Track metadata identifier NGRMPLFEMP3WES data_source ROADMAP_Enhancers Download track Download number_of_intervals 81,856 bp_covered 97,301,132 output_type enhancer chromatin states genome_build hg38 cell_type T-helper memory cell biosample_type Primary cell biosample_term_id CL:0000897 tissue_category Blood encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody consolidated assay ChromHMM file_format bed bed4 file_size 536,268 downloaded_date 08/15/2018 release_date 03/30/2018 date_added_to_filer 02/20/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/E040_15_coreMarks_hg38lift_mnemonics_enhancer.bed.gz processed_file_md5 f9bd3e1d87d190e0bf803c5768931935 wget_command wget https://filer2.niagads.org/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/E040_15_coreMarks_hg38lift_mnemonics_enhancer.bed.gz -P GADB/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/E040_15_coreMarks_hg38lift_mnemonics_enhancer.bed.gz.tbi -P GADB/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/all_hg38lift.mnemonics.bedFiles.tgz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/ChromHMM/E040_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/Downloads/ROADMAP/ChromHMM/ raw_file_md5 69a9b7e13563510bc3496472e0869e2f data_category Enhancer Genomic feature type ChromHMM consolidated enhancer chromatin states track_description version=2018;Original_cell_type=Primary T helper memory cells from peripheral blood 1;schema=BED4;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP_Enhancers.html;original_biosample_term_id=Not available;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name ROADMAP_Enhancers T-helper memory cell ChromHMM consolidated enhancer chromatin states (bed4) [Enhancer]
consolidated • DND-41 NGRMPLLCWVQWBD • ROADMAP25693563 ChromHMM DND-41 Chromatin states Show metadata Download track Track metadata identifier NGRMPLLCWVQWBD data_source ROADMAP Download track Download number_of_intervals 363,222 bp_covered 2,865,575,419 output_type chromatin states genome_build hg38 cell_type DND-41 biosample_type Cell line biosample_term_id EFO:0007074 tissue_category Blood encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody consolidated assay ChromHMM file_format bed bed4 file_size 2,174,987 downloaded_date 08/15/2018 release_date 03/30/2018 date_added_to_filer 02/20/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E115_15_coreMarks_hg38lift_mnemonics.bed.gz processed_file_md5 1e016d2cdc612ae63d062a5402b3ca9c wget_command wget https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E115_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E115_15_coreMarks_hg38lift_mnemonics.bed.gz.tbi -P GADB/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/all_hg38lift.mnemonics.bedFiles.tgz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/ChromHMM/E115_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/Downloads/ROADMAP/ChromHMM/ raw_file_md5 6532606149e163a1eb9747885f7a1b5d data_category Chromatin states Genomic feature type ChIP-seq consolidated ChromHMM track_description version=2018;Original_cell_type=Dnd41 TCell Leukemia Cell Line;schema=BED4;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP.html;original_biosample_term_id=EFO:0007074;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name ROADMAP DND-41 ChromHMM consolidated chromatin states (bed4) [Chromatin states]
consolidated • Hematopoietic stem cell NGRMPLLEJGQ6NT • ROADMAP25693563 ChromHMM Hematopoietic stem cell Chromatin states Show metadata Download track Track metadata identifier NGRMPLLEJGQ6NT data_source ROADMAP Download track Download number_of_intervals 601,038 bp_covered 2,865,575,419 output_type chromatin states genome_build hg38 cell_type Hematopoietic stem cell biosample_type Stem cell biosample_term_id CL:0000037 tissue_category Stem Cell encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody consolidated assay ChromHMM file_format bed bed4 file_size 3,570,767 downloaded_date 08/15/2018 release_date 03/30/2018 date_added_to_filer 02/20/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E051_15_coreMarks_hg38lift_mnemonics.bed.gz processed_file_md5 cb8c4400327c343725207820a259fdc0 wget_command wget https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E051_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/E051_15_coreMarks_hg38lift_mnemonics.bed.gz.tbi -P GADB/Annotationtracks/RoadMap/ChIP-seq/bed4/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/all_hg38lift.mnemonics.bedFiles.tgz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/ChromHMM/E051_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/Downloads/ROADMAP/ChromHMM/ raw_file_md5 e5389153633424cdc5af81ed076ed986 data_category Chromatin states Genomic feature type ChIP-seq consolidated ChromHMM track_description version=2018;Original_cell_type=Primary hematopoietic stem cells G-CSF-mobilized Male;schema=BED4;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=no system_category Stem Cell life_stage Unknown track_name ROADMAP Hematopoietic stem cell ChromHMM consolidated chromatin states (bed4) [Chromatin states]
consolidated • T-helper cell NGRMPLPHAABDJK • ROADMAP Enhancers25693563 ChromHMM T-helper cell Enhancer Show metadata Download track Track metadata identifier NGRMPLPHAABDJK data_source ROADMAP_Enhancers Download track Download number_of_intervals 98,914 bp_covered 118,903,973 output_type enhancer chromatin states genome_build hg38 cell_type T-helper cell biosample_type Primary cell biosample_term_id CL:0000912 tissue_category Blood encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody consolidated assay ChromHMM file_format bed bed4 file_size 648,876 downloaded_date 08/15/2018 release_date 03/30/2018 date_added_to_filer 02/20/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/E041_15_coreMarks_hg38lift_mnemonics_enhancer.bed.gz processed_file_md5 39992a5660fc2e976978e26b0391393e wget_command wget https://filer2.niagads.org/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/E041_15_coreMarks_hg38lift_mnemonics_enhancer.bed.gz -P GADB/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/E041_15_coreMarks_hg38lift_mnemonics_enhancer.bed.gz.tbi -P GADB/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/all_hg38lift.mnemonics.bedFiles.tgz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/ChromHMM/E041_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/Downloads/ROADMAP/ChromHMM/ raw_file_md5 53c763ab5aca13150bb130a08752ae00 data_category Enhancer Genomic feature type ChromHMM consolidated enhancer chromatin states track_description version=2018;Original_cell_type=Primary T helper cells PMA-I stimulated;schema=BED4;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP_Enhancers.html;original_biosample_term_id=Not available;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name ROADMAP_Enhancers T-helper cell ChromHMM consolidated enhancer chromatin states (bed4) [Enhancer]
consolidated • Lung NGRMPLPXIN5G47 • ROADMAP Enhancers25693563 ChromHMM Lung Enhancer Show metadata Download track Track metadata identifier NGRMPLPXIN5G47 data_source ROADMAP_Enhancers Download track Download number_of_intervals 95,291 bp_covered 74,725,747 output_type enhancer chromatin states genome_build hg38 cell_type Lung biosample_type Primary tissue biosample_term_id UBERON:0002048 tissue_category Lung encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody consolidated assay ChromHMM file_format bed bed4 file_size 622,862 downloaded_date 08/15/2018 release_date 03/30/2018 date_added_to_filer 02/20/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/E096_15_coreMarks_hg38lift_mnemonics_enhancer.bed.gz processed_file_md5 496c3cb8265b1084e32b8812cefeeddd wget_command wget https://filer2.niagads.org/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/E096_15_coreMarks_hg38lift_mnemonics_enhancer.bed.gz -P GADB/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/E096_15_coreMarks_hg38lift_mnemonics_enhancer.bed.gz.tbi -P GADB/Annotationtracks/ROADMAP_Enhancers/ChIP-seq/bed4/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/coreMarks/jointModel/final/all_hg38lift.mnemonics.bedFiles.tgz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/ChromHMM/E096_15_coreMarks_hg38lift_mnemonics.bed.gz -P GADB/Annotationtracks/Downloads/ROADMAP/ChromHMM/ raw_file_md5 54ae385d38dd94642e4f801ec919c318 data_category Enhancer Genomic feature type ChromHMM consolidated enhancer chromatin states track_description version=2018;Original_cell_type=Lung;schema=BED4;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP_Enhancers.html;original_biosample_term_id=Not available;is_hg38_lifted=no system_category Respiratory life_stage Unknown track_name ROADMAP_Enhancers Lung ChromHMM consolidated enhancer chromatin states (bed4) [Enhancer]