CREB1 • A549 NGFTBHXC6HR25J • Factorbook34755879 Motif finding A549 TFBS Show metadata Download track Track metadata identifier NGFTBHXC6HR25J data_source Factorbook Download track Download number_of_intervals 2,254 bp_covered 45,080 output_type transcription factor binding sites all genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR000BRA biological_replicate 1 technical_replicate 1_1 antibody CREB1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 43,878 downloaded_date 07/10/2024 release_date 02/29/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF809WPK_CGGCGCGSVSYGRTGACGTC_sorted.bed.gz processed_file_md5 074e38fc8c3f901c993d2671daf0d293 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF809WPK_CGGCGCGSVSYGRTGACGTC_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF809WPK_CGGCGCGSVSYGRTGACGTC_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF809WPK_CGGCGCGSVSYGRTGACGTC.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF809WPK_CGGCGCGSVSYGRTGACGTC.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 2e016c814b6de86194c54040091e6361 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens A549 treated with 0.02% ethanol for 1 hour;Original_cell_type=A549;Lab=Richard Myers, HAIB;System=respiratory system;ENCODE_BED_id=ENCFF809WPK;ENCODE_bigBed_id=ENCFF865WAF;PMID=34755879;Motif_sequence=CGGCGCGSVSYGRTGACGTC;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name Factorbook A549 (repl. 1) Motif finding CREB1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BRA] [Life stage: Adult] [TFBS]
CREB1 • HepG2 NGFTBIOQPBHVHB • Factorbook34755879 Motif finding HepG2 TFBS Show metadata Download track Track metadata identifier NGFTBIOQPBHVHB data_source Factorbook Download track Download number_of_intervals 5,264 bp_covered 57,904 output_type transcription factor binding sites all genome_build hg38 cell_type HepG2 biosample_type Cell line biosample_term_id EFO:0001187 tissue_category Liver encode_experiment_id ENCSR331ORD biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CREB1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 64,117 downloaded_date 07/10/2024 release_date 06/14/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF955MFB_TCTSATTGGCT_sorted.bed.gz processed_file_md5 4f005c9cd20e24cacfaae9cda3dea09d wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF955MFB_TCTSATTGGCT_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF955MFB_TCTSATTGGCT_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF955MFB_TCTSATTGGCT.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF955MFB_TCTSATTGGCT.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 d4bf2c7b207b63f739ca9df2c9f916a9 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens CREB1;Original_cell_type=HepG2;Lab=Richard Myers, HAIB;System=exocrine system,endocrine system,digestive system;ENCODE_BED_id=ENCFF955MFB;ENCODE_bigBed_id=ENCFF576ERP;PMID=34755879;Motif_sequence=TCTSATTGGCT;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001187;is_hg38_lifted=no system_category Digestive life_stage Child track_name Factorbook HepG2 (repl. 1, 2) Motif finding CREB1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR331ORD] [Life stage: Child] [TFBS]
CREB1 • MCF-7 NGFTBIPTDL5T3Q • Factorbook34755879 Motif finding MCF-7 TFBS Show metadata Download track Track metadata identifier NGFTBIPTDL5T3Q data_source Factorbook Download track Download number_of_intervals 4 bp_covered 84 output_type transcription factor binding sites significant genome_build hg38 cell_type MCF-7 biosample_type Cell line biosample_term_id EFO:0001203 tissue_category Breast encode_experiment_id ENCSR897JAS biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CREB1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 440 downloaded_date 07/10/2024 release_date 07/08/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF030DLI_NGTGACGTCAYCRVSVBSSSC_filtered.bed.gz processed_file_md5 2f605bccec33bee07876004f237ab358 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF030DLI_NGTGACGTCAYCRVSVBSSSC_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF030DLI_NGTGACGTCAYCRVSVBSSSC_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF030DLI_NGTGACGTCAYCRVSVBSSSC.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF030DLI_NGTGACGTCAYCRVSVBSSSC.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 19262c972ca81bfdd80ada6f8de36525 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens MCF-7;Original_cell_type=MCF-7;Lab=Michael Snyder, Stanford;System=exocrine system,integumental system;ENCODE_BED_id=ENCFF030DLI;ENCODE_bigBed_id=ENCFF867SAS;PMID=34755879;Motif_sequence=NGTGACGTCAYCRVSVBSSSC;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001203;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook MCF-7 (repl. 1, 2) Motif finding CREB1 transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR897JAS] [Life stage: Adult] [TFBS]
CREB1 • A549 NGFTBK4SLOBUAC • Factorbook34755879 Motif finding A549 TFBS Show metadata Download track Track metadata identifier NGFTBK4SLOBUAC data_source Factorbook Download track Download number_of_intervals 979 bp_covered 13,706 output_type transcription factor binding sites all genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR000BRC biological_replicate 2 technical_replicate 2_1 antibody CREB1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 16,787 downloaded_date 07/10/2024 release_date 02/29/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF858ASA_NGSNRRTGACGTMA_sorted.bed.gz processed_file_md5 374d527a8a4b8d2d363c6a64ac7b0297 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF858ASA_NGSNRRTGACGTMA_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF858ASA_NGSNRRTGACGTMA_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF858ASA_NGSNRRTGACGTMA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF858ASA_NGSNRRTGACGTMA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 386f81506e1af2d4e918db6b4c79faad data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens A549 treated with 0.02% ethanol for 1 hour;Original_cell_type=A549;Lab=Richard Myers, HAIB;System=respiratory system;ENCODE_BED_id=ENCFF858ASA;ENCODE_bigBed_id=ENCFF403CRO;PMID=34755879;Motif_sequence=NGSNRRTGACGTMA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name Factorbook A549 (repl. 2) Motif finding CREB1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BRC] [Life stage: Adult] [TFBS]
CREB1 • GM12878 NGFTBK5PYRMMUN • Factorbook34755879 Motif finding GM12878 TFBS Show metadata Download track Track metadata identifier NGFTBK5PYRMMUN data_source Factorbook Download track Download number_of_intervals 3,612 bp_covered 72,240 output_type transcription factor binding sites all genome_build hg38 cell_type GM12878 biosample_type Cell line biosample_term_id EFO:0002784 tissue_category Blood encode_experiment_id ENCSR000BUF biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CREB1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 70,547 downloaded_date 07/10/2024 release_date 09/10/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF053UZX_RACTACAWYTCCCAGAADGC_sorted.bed.gz processed_file_md5 ddb2381ebd3e1a72b6c8993bf5eacd42 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF053UZX_RACTACAWYTCCCAGAADGC_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF053UZX_RACTACAWYTCCCAGAADGC_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF053UZX_RACTACAWYTCCCAGAADGC.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF053UZX_RACTACAWYTCCCAGAADGC.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 7f26a896c3ffb7b75b9da253f2f58a48 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens GM12878;Original_cell_type=GM12878;Lab=Richard Myers, HAIB;System=immune system;ENCODE_BED_id=ENCFF053UZX;ENCODE_bigBed_id=ENCFF870CVH;PMID=34755879;Motif_sequence=RACTACAWYTCCCAGAADGC;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002784;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name Factorbook GM12878 (repl. 1, 2) Motif finding CREB1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BUF] [TFBS]
CREB1 • Ishikawa NGFTBLV2TSB5X2 • Factorbook34755879 Motif finding Ishikawa TFBS Show metadata Download track Track metadata identifier NGFTBLV2TSB5X2 data_source Factorbook Download track Download number_of_intervals 2,847 bp_covered 28,470 output_type transcription factor binding sites all genome_build hg38 cell_type Ishikawa biosample_type Cell line biosample_term_id EFO:0005718 tissue_category Female Reproductive encode_experiment_id ENCSR000BUR biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CREB1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 40,199 downloaded_date 07/10/2024 release_date 09/10/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF259FVH_CACTTCCGGY_sorted.bed.gz processed_file_md5 2f329cde8428f77eb17f1ebd7b6f651b wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF259FVH_CACTTCCGGY_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF259FVH_CACTTCCGGY_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF259FVH_CACTTCCGGY.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF259FVH_CACTTCCGGY.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 d1534c52af5c6df07ee064c8a8fce718 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens Ishikawa;Original_cell_type=Ishikawa;Lab=Richard Myers, HAIB;System=reproductive system;ENCODE_BED_id=ENCFF259FVH;ENCODE_bigBed_id=ENCFF197ISF;PMID=34755879;Motif_sequence=CACTTCCGGY;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0005718;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook Ishikawa (repl. 1, 2) Motif finding CREB1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BUR] [Life stage: Adult] [TFBS]
CREB1 • HepG2 NGFTBM7TDVOGI3 • Factorbook34755879 Motif finding HepG2 TFBS Show metadata Download track Track metadata identifier NGFTBM7TDVOGI3 data_source Factorbook Download track Download number_of_intervals 24,805 bp_covered 372,075 output_type transcription factor binding sites all genome_build hg38 cell_type HepG2 biosample_type Cell line biosample_term_id EFO:0001187 tissue_category Liver encode_experiment_id ENCSR112ALD biological_replicate 2, 3 technical_replicate 2_1, 3_1 antibody CREB1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 396,148 downloaded_date 07/10/2024 release_date 11/14/2017 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF314KET_SYGRTGACGTCACDS_sorted.bed.gz processed_file_md5 0609d46cc5aeabed97dcbf12522f5cdb wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF314KET_SYGRTGACGTCACDS_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF314KET_SYGRTGACGTCACDS_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF314KET_SYGRTGACGTCACDS.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF314KET_SYGRTGACGTCACDS.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 06418c5fa2ef4660a6a5a14e8ad03796 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens HepG2;Original_cell_type=HepG2;Lab=Michael Snyder, Stanford;System=exocrine system,endocrine system,digestive system;ENCODE_BED_id=ENCFF314KET;ENCODE_bigBed_id=ENCFF792THT;PMID=34755879;Motif_sequence=SYGRTGACGTCACDS;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001187;is_hg38_lifted=no system_category Digestive life_stage Child track_name Factorbook HepG2 (repl. 2, 3) Motif finding CREB1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR112ALD] [Life stage: Child] [TFBS]
CREB1 • K562 NGFTBN4532UUWS • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBN4532UUWS data_source Factorbook Download track Download number_of_intervals 5,578 bp_covered 83,670 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR000BSO biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CREB1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 88,584 downloaded_date 07/10/2024 release_date 09/10/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF193LLN_CCKCSRTGACGTCAB_sorted.bed.gz processed_file_md5 f4b469b2e10edc0cd11ce45a212e5445 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF193LLN_CCKCSRTGACGTCAB_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF193LLN_CCKCSRTGACGTCAB_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF193LLN_CCKCSRTGACGTCAB.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF193LLN_CCKCSRTGACGTCAB.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 60ac4b01c038c1eb8e4177840db0c230 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Richard Myers, HAIB;System=immune system;ENCODE_BED_id=ENCFF193LLN;ENCODE_bigBed_id=ENCFF175LMX;PMID=34755879;Motif_sequence=CCKCSRTGACGTCAB;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding CREB1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BSO] [Life stage: Adult] [TFBS]
CREB1 • Ishikawa NGFTBNTMNESUN5 • Factorbook34755879 Motif finding Ishikawa TFBS Show metadata Download track Track metadata identifier NGFTBNTMNESUN5 data_source Factorbook Download track Download number_of_intervals 1,734 bp_covered 17,340 output_type transcription factor binding sites all genome_build hg38 cell_type Ishikawa biosample_type Cell line biosample_term_id EFO:0005718 tissue_category Female Reproductive encode_experiment_id ENCSR000BUR biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CREB1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 23,372 downloaded_date 07/10/2024 release_date 09/10/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF259FVH_YSATTGGCTG_sorted.bed.gz processed_file_md5 c5a9e705580ff78c52993bd89de87ea5 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF259FVH_YSATTGGCTG_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF259FVH_YSATTGGCTG_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF259FVH_YSATTGGCTG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF259FVH_YSATTGGCTG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 e1e1fa6ddf2c7d1ba1faf2477f9cf435 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens Ishikawa;Original_cell_type=Ishikawa;Lab=Richard Myers, HAIB;System=reproductive system;ENCODE_BED_id=ENCFF259FVH;ENCODE_bigBed_id=ENCFF197ISF;PMID=34755879;Motif_sequence=YSATTGGCTG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0005718;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook Ishikawa (repl. 1, 2) Motif finding CREB1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BUR] [Life stage: Adult] [TFBS]
CREB1 • HepG2 NGFTBNYFFRJ327 • Factorbook34755879 Motif finding HepG2 TFBS Show metadata Download track Track metadata identifier NGFTBNYFFRJ327 data_source Factorbook Download track Download number_of_intervals 6,667 bp_covered 53,336 output_type transcription factor binding sites all genome_build hg38 cell_type HepG2 biosample_type Cell line biosample_term_id EFO:0001187 tissue_category Liver encode_experiment_id ENCSR331ORD biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CREB1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 59,039 downloaded_date 07/10/2024 release_date 06/14/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF955MFB_CCGGAAGY_sorted.bed.gz processed_file_md5 bb241db9e9cccfac55db57528e41cbb2 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF955MFB_CCGGAAGY_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF955MFB_CCGGAAGY_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF955MFB_CCGGAAGY.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF955MFB_CCGGAAGY.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 d0622250bf29cb8ac9145f8c6ba65a0b data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens CREB1;Original_cell_type=HepG2;Lab=Richard Myers, HAIB;System=exocrine system,endocrine system,digestive system;ENCODE_BED_id=ENCFF955MFB;ENCODE_bigBed_id=ENCFF576ERP;PMID=34755879;Motif_sequence=CCGGAAGY;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001187;is_hg38_lifted=no system_category Digestive life_stage Child track_name Factorbook HepG2 (repl. 1, 2) Motif finding CREB1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR331ORD] [Life stage: Child] [TFBS]
CREB1 • MCF-7 NGFTBQUSYUJEF6 • Factorbook34755879 Motif finding MCF-7 TFBS Show metadata Download track Track metadata identifier NGFTBQUSYUJEF6 data_source Factorbook Download track Download number_of_intervals 12 bp_covered 252 output_type transcription factor binding sites significant genome_build hg38 cell_type MCF-7 biosample_type Cell line biosample_term_id EFO:0001203 tissue_category Breast encode_experiment_id ENCSR620DUQ biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CREB1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 536 downloaded_date 07/10/2024 release_date 09/28/2017 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF599FYT_GTGACGTCAYVRSSGCGBGMC_filtered.bed.gz processed_file_md5 b5628ef6cf8eee4d6496a9bb9ab73842 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF599FYT_GTGACGTCAYVRSSGCGBGMC_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF599FYT_GTGACGTCAYVRSSGCGBGMC_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF599FYT_GTGACGTCAYVRSSGCGBGMC.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF599FYT_GTGACGTCAYVRSSGCGBGMC.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 2c54ebf2838bbafae903acd3063fcd9e data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens MCF-7;Original_cell_type=MCF-7;Lab=Michael Snyder, Stanford;System=exocrine system,integumental system;ENCODE_BED_id=ENCFF599FYT;ENCODE_bigBed_id=ENCFF341ZEM;PMID=34755879;Motif_sequence=GTGACGTCAYVRSSGCGBGMC;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001203;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook MCF-7 (repl. 1, 2) Motif finding CREB1 transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR620DUQ] [Life stage: Adult] [TFBS]
CREB1 • GM12878 NGFTBRLILYZ72P • Factorbook34755879 Motif finding GM12878 TFBS Show metadata Download track Track metadata identifier NGFTBRLILYZ72P data_source Factorbook Download track Download number_of_intervals 5,025 bp_covered 100,500 output_type transcription factor binding sites all genome_build hg38 cell_type GM12878 biosample_type Cell line biosample_term_id EFO:0002784 tissue_category Blood encode_experiment_id ENCSR000BUF biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CREB1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 96,077 downloaded_date 07/10/2024 release_date 09/10/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF053UZX_CGGCGCGSNSHGATGACGYC_sorted.bed.gz processed_file_md5 dee0281fe36718c98fa29e0726af3253 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF053UZX_CGGCGCGSNSHGATGACGYC_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF053UZX_CGGCGCGSNSHGATGACGYC_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF053UZX_CGGCGCGSNSHGATGACGYC.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF053UZX_CGGCGCGSNSHGATGACGYC.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 d9f059baf4ed96e1decfd81c9f804544 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens GM12878;Original_cell_type=GM12878;Lab=Richard Myers, HAIB;System=immune system;ENCODE_BED_id=ENCFF053UZX;ENCODE_bigBed_id=ENCFF870CVH;PMID=34755879;Motif_sequence=CGGCGCGSNSHGATGACGYC;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002784;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name Factorbook GM12878 (repl. 1, 2) Motif finding CREB1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BUF] [TFBS]
CREB1 • GM12878 NGFTBRZERL55FZ • Factorbook34755879 Motif finding GM12878 TFBS Show metadata Download track Track metadata identifier NGFTBRZERL55FZ data_source Factorbook Download track Download number_of_intervals 250 bp_covered 5,000 output_type transcription factor binding sites significant genome_build hg38 cell_type GM12878 biosample_type Cell line biosample_term_id EFO:0002784 tissue_category Blood encode_experiment_id ENCSR000BUF biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CREB1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 4,123 downloaded_date 07/10/2024 release_date 09/10/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF053UZX_RACTACAWYTCCCAGAADGC_filtered.bed.gz processed_file_md5 e9319347b9436d8fdae0ca7e414a1705 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF053UZX_RACTACAWYTCCCAGAADGC_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF053UZX_RACTACAWYTCCCAGAADGC_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF053UZX_RACTACAWYTCCCAGAADGC.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF053UZX_RACTACAWYTCCCAGAADGC.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 7f26a896c3ffb7b75b9da253f2f58a48 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens GM12878;Original_cell_type=GM12878;Lab=Richard Myers, HAIB;System=immune system;ENCODE_BED_id=ENCFF053UZX;ENCODE_bigBed_id=ENCFF870CVH;PMID=34755879;Motif_sequence=RACTACAWYTCCCAGAADGC;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002784;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name Factorbook GM12878 (repl. 1, 2) Motif finding CREB1 transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR000BUF] [TFBS]
CREB1 • H1-hESC NGFTBS44F75BYW • Factorbook34755879 Motif finding H1-hESC TFBS Show metadata Download track Track metadata identifier NGFTBS44F75BYW data_source Factorbook Download track Download number_of_intervals 1 bp_covered 20 output_type transcription factor binding sites significant genome_build hg38 cell_type H1-hESC biosample_type Cell line biosample_term_id EFO:0003042 tissue_category Embryo encode_experiment_id ENCSR000BSN biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CREB1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 352 downloaded_date 07/10/2024 release_date 09/10/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF978KGB_GRCGTCATCRSBSCGCGCCG_filtered.bed.gz processed_file_md5 cead982631491f60708c632faaaab5c2 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF978KGB_GRCGTCATCRSBSCGCGCCG_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF978KGB_GRCGTCATCRSBSCGCGCCG_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF978KGB_GRCGTCATCRSBSCGCGCCG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF978KGB_GRCGTCATCRSBSCGCGCCG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 032ba589b835b7072e01e6bceec187a7 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens H1;Original_cell_type=H1;Lab=Richard Myers, HAIB;System=NR;ENCODE_BED_id=ENCFF978KGB;ENCODE_bigBed_id=ENCFF955PMP;PMID=34755879;Motif_sequence=GRCGTCATCRSBSCGCGCCG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0003042;is_hg38_lifted=no system_category Embryo life_stage Unknown track_name Factorbook H1-hESC (repl. 1, 2) Motif finding CREB1 transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR000BSN] [TFBS]
CREB1 • MCF-7 NGFTBTY3FNGJT3 • Factorbook34755879 Motif finding MCF-7 TFBS Show metadata Download track Track metadata identifier NGFTBTY3FNGJT3 data_source Factorbook Download track Download number_of_intervals 5,619 bp_covered 106,761 output_type transcription factor binding sites all genome_build hg38 cell_type MCF-7 biosample_type Cell line biosample_term_id EFO:0001203 tissue_category Breast encode_experiment_id ENCSR897JAS biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CREB1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 102,734 downloaded_date 07/10/2024 release_date 07/08/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF030DLI_CGGCGCGSMSHGATGACGY_sorted.bed.gz processed_file_md5 bd509bfb332a1627f7409f99f64391d3 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF030DLI_CGGCGCGSMSHGATGACGY_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF030DLI_CGGCGCGSMSHGATGACGY_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF030DLI_CGGCGCGSMSHGATGACGY.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF030DLI_CGGCGCGSMSHGATGACGY.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 fc6d39fb5765cd9cc2a4725942afcc1f data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens MCF-7;Original_cell_type=MCF-7;Lab=Michael Snyder, Stanford;System=exocrine system,integumental system;ENCODE_BED_id=ENCFF030DLI;ENCODE_bigBed_id=ENCFF867SAS;PMID=34755879;Motif_sequence=CGGCGCGSMSHGATGACGY;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001203;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook MCF-7 (repl. 1, 2) Motif finding CREB1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR897JAS] [Life stage: Adult] [TFBS]
CREB1 • H1-hESC NGFTBU4NNMGPQU • Factorbook34755879 Motif finding H1-hESC TFBS Show metadata Download track Track metadata identifier NGFTBU4NNMGPQU data_source Factorbook Download track Download number_of_intervals 8,623 bp_covered 172,460 output_type transcription factor binding sites all genome_build hg38 cell_type H1-hESC biosample_type Cell line biosample_term_id EFO:0003042 tissue_category Embryo encode_experiment_id ENCSR000BSN biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CREB1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 165,040 downloaded_date 07/10/2024 release_date 09/10/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF978KGB_GRCGTCATCRSBSCGCGCCG_sorted.bed.gz processed_file_md5 9ad980b177e3c63ece502ad2d2c87be5 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF978KGB_GRCGTCATCRSBSCGCGCCG_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF978KGB_GRCGTCATCRSBSCGCGCCG_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF978KGB_GRCGTCATCRSBSCGCGCCG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF978KGB_GRCGTCATCRSBSCGCGCCG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 032ba589b835b7072e01e6bceec187a7 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens H1;Original_cell_type=H1;Lab=Richard Myers, HAIB;System=NR;ENCODE_BED_id=ENCFF978KGB;ENCODE_bigBed_id=ENCFF955PMP;PMID=34755879;Motif_sequence=GRCGTCATCRSBSCGCGCCG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0003042;is_hg38_lifted=no system_category Embryo life_stage Unknown track_name Factorbook H1-hESC (repl. 1, 2) Motif finding CREB1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BSN] [TFBS]
CREB1 • MCF-7 NGFTBUGE2XEJ34 • Factorbook34755879 Motif finding MCF-7 TFBS Show metadata Download track Track metadata identifier NGFTBUGE2XEJ34 data_source Factorbook Download track Download number_of_intervals 1 bp_covered 19 output_type transcription factor binding sites significant genome_build hg38 cell_type MCF-7 biosample_type Cell line biosample_term_id EFO:0001203 tissue_category Breast encode_experiment_id ENCSR897JAS biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CREB1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 353 downloaded_date 07/10/2024 release_date 07/08/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF030DLI_CGGCGCGSMSHGATGACGY_filtered.bed.gz processed_file_md5 9d6e09223d6afaed8990fccd13ed2abb wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF030DLI_CGGCGCGSMSHGATGACGY_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF030DLI_CGGCGCGSMSHGATGACGY_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF030DLI_CGGCGCGSMSHGATGACGY.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF030DLI_CGGCGCGSMSHGATGACGY.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 fc6d39fb5765cd9cc2a4725942afcc1f data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens MCF-7;Original_cell_type=MCF-7;Lab=Michael Snyder, Stanford;System=exocrine system,integumental system;ENCODE_BED_id=ENCFF030DLI;ENCODE_bigBed_id=ENCFF867SAS;PMID=34755879;Motif_sequence=CGGCGCGSMSHGATGACGY;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001203;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook MCF-7 (repl. 1, 2) Motif finding CREB1 transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR897JAS] [Life stage: Adult] [TFBS]
CREB1 • A549 NGFTBUIIK7RWGO • Factorbook34755879 Motif finding A549 TFBS Show metadata Download track Track metadata identifier NGFTBUIIK7RWGO data_source Factorbook Download track Download number_of_intervals 3,344 bp_covered 36,784 output_type transcription factor binding sites all genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR000BRB biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CREB1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 48,822 downloaded_date 07/10/2024 release_date 02/29/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF390BVP_CYGATTGGCTG_sorted.bed.gz processed_file_md5 7d10ba2be6f978802638d62ad3923fb5 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF390BVP_CYGATTGGCTG_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF390BVP_CYGATTGGCTG_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF390BVP_CYGATTGGCTG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF390BVP_CYGATTGGCTG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 ebdba87881e9b809c2473396b1e10c9b data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens A549 treated with 100 nM dexamethasone (agonist) for 1 hour;Original_cell_type=A549;Lab=Richard Myers, HAIB;System=respiratory system;ENCODE_BED_id=ENCFF390BVP;ENCODE_bigBed_id=ENCFF772MCA;PMID=34755879;Motif_sequence=CYGATTGGCTG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name Factorbook A549 (repl. 1, 2) Motif finding CREB1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BRB] [Life stage: Adult] [TFBS]
CREB1 • MCF-7 NGFTBUIT7XJJPF • Factorbook34755879 Motif finding MCF-7 TFBS Show metadata Download track Track metadata identifier NGFTBUIT7XJJPF data_source Factorbook Download track Download number_of_intervals 19,723 bp_covered 295,845 output_type transcription factor binding sites all genome_build hg38 cell_type MCF-7 biosample_type Cell line biosample_term_id EFO:0001203 tissue_category Breast encode_experiment_id ENCSR620DUQ biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CREB1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 309,765 downloaded_date 07/10/2024 release_date 09/28/2017 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF599FYT_SNSTGACGTCAYCRS_sorted.bed.gz processed_file_md5 21ce33b0faceefdec145bfefa7da9169 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF599FYT_SNSTGACGTCAYCRS_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF599FYT_SNSTGACGTCAYCRS_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF599FYT_SNSTGACGTCAYCRS.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF599FYT_SNSTGACGTCAYCRS.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 293100d0ba4e15c642b6afd3674744c3 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens MCF-7;Original_cell_type=MCF-7;Lab=Michael Snyder, Stanford;System=exocrine system,integumental system;ENCODE_BED_id=ENCFF599FYT;ENCODE_bigBed_id=ENCFF341ZEM;PMID=34755879;Motif_sequence=SNSTGACGTCAYCRS;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001203;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook MCF-7 (repl. 1, 2) Motif finding CREB1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR620DUQ] [Life stage: Adult] [TFBS]
CREB1 • A549 NGFTBVCSNBLKYP • Factorbook34755879 Motif finding A549 TFBS Show metadata Download track Track metadata identifier NGFTBVCSNBLKYP data_source Factorbook Download track Download number_of_intervals 2,942 bp_covered 23,536 output_type transcription factor binding sites all genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR000BRB biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CREB1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 32,892 downloaded_date 07/10/2024 release_date 02/29/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF390BVP_CGGAAGTG_sorted.bed.gz processed_file_md5 042c5fce5ebb1d23defb047c5c45eba1 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF390BVP_CGGAAGTG_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF390BVP_CGGAAGTG_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF390BVP_CGGAAGTG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF390BVP_CGGAAGTG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 86f92598470991a8f55c8fbf12ef7342 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens A549 treated with 100 nM dexamethasone (agonist) for 1 hour;Original_cell_type=A549;Lab=Richard Myers, HAIB;System=respiratory system;ENCODE_BED_id=ENCFF390BVP;ENCODE_bigBed_id=ENCFF772MCA;PMID=34755879;Motif_sequence=CGGAAGTG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name Factorbook A549 (repl. 1, 2) Motif finding CREB1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BRB] [Life stage: Adult] [TFBS]