CREM • K562 NGENCRO224XTH7 • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq K562 TF Show metadata Download track Track metadata identifier NGENCRO224XTH7 data_source ENCODE Download track Download number_of_intervals 38,537 bp_covered 10,542,931 output_type IDR thresholded peaks genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR077DKV biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CREM assay TF ChIP-seq file_format bed narrowPeak file_size 693,147 downloaded_date 06/12/2022 release_date 02/04/2021 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF180STA.bed.gz processed_file_md5 5c09c99d3bb0cec41376d97eae50de2f wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF180STA.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF180STA.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF180STA/@@download/ENCFF180STA.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF180STA.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 f487948c7d3632534eda0ccaee9a63fb data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens K562;Lab=Richard Myers, HAIB;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=adult 53 years;Reference=PMCID:PMC6724667;External_resources=GEO:GSE95909,FactorBook:ENCSR077DKV;Project=ENCODE;Award=U54HG006998;Experiment_date_released=2014-07-07;Submitted_track_name=pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=hematopoietic cell,leukocyte,cancer cell;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=K562 cell,K-562 cell,K-562;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name ENCODE K562 (repl. 1, 2) TF ChIP-seq CREM IDR thresholded peaks (narrowPeak) [Experiment: ENCSR077DKV] [Life stage: Adult] [TF ChIP-seq peaks]
CREM • K562 NGENCSUCMZDJOT • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq K562 TF Show metadata Download track Track metadata identifier NGENCSUCMZDJOT data_source ENCODE Download track Download number_of_intervals 22,798 bp_covered 6,050,905 output_type IDR thresholded peaks genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR077DKV biological_replicate 2 technical_replicate 2_1 antibody CREM assay TF ChIP-seq file_format bed narrowPeak file_size 382,435 downloaded_date 06/12/2022 release_date 02/04/2021 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF913GDS.bed.gz processed_file_md5 98cc0a57b83b2a106144194515709395 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF913GDS.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF913GDS.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF913GDS/@@download/ENCFF913GDS.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF913GDS.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 be17a9276058a9c5efeaa6485113aba0 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens K562;Lab=Richard Myers, HAIB;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=adult 53 years;Reference=PMCID:PMC6724667;External_resources=GEO:GSE95909,FactorBook:ENCSR077DKV;Project=ENCODE;Award=U54HG006998;Experiment_date_released=2014-07-07;Submitted_track_name=rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=hematopoietic cell,leukocyte,cancer cell;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=K562 cell,K-562 cell,K-562;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name ENCODE K562 (repl. 2) TF ChIP-seq CREM IDR thresholded peaks (narrowPeak) [Experiment: ENCSR077DKV] [Life stage: Adult] [TF ChIP-seq peaks]
CREM • WTC11 NGENCUOILCQAE5 • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq WTC11 TF Show metadata Download track Track metadata identifier NGENCUOILCQAE5 data_source ENCODE Download track Download number_of_intervals 7,400 bp_covered 2,713,942 output_type IDR thresholded peaks genome_build hg38 cell_type WTC11 biosample_type Cell line biosample_term_id EFO:0009747 tissue_category Skin encode_experiment_id ENCSR564TIP biological_replicate 1 technical_replicate 1_1 antibody CREM assay TF ChIP-seq file_format bed narrowPeak file_size 139,846 downloaded_date 05/15/2024 release_date 09/28/2022 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF486QFD.bed.gz processed_file_md5 4d59db729cb560d8b165a03f769b3af3 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF486QFD.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF486QFD.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF486QFD/@@download/ENCFF486QFD.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF486QFD.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 189042244105a83af2fa3d3fae1f3877 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens WTC11 genetically modified (insertion) using CRISPR targeting H. sapiens CREM;Lab=Richard Myers, HAIB;ENCODE_internal_tags=RegulomeDB_2_2;Life_stage_age=adult 30 years;Reference=NR;External_resources=GEO:GSE230926;Project=ENCODE;Award=UM1HG009411;Experiment_date_released=2022-10-03,2022-09-26;Submitted_track_name=rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=WTC11;ENCODE_cell_slims=stem cell,connective tissue cell,fibroblast,induced pluripotent stem cell;ENCODE_system_slims=integumental system;ENCODE_biosample_term_synonyms=WTC11,WTC-11;Analysis_title=ENCODE4 v1.8.1 GRCh38;GM=[Method:CRISPR|Category:insertion];schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0009747;is_hg38_lifted=no system_category Integumentary life_stage Adult track_name ENCODE WTC11 (repl. 1) TF ChIP-seq CREM IDR thresholded peaks (narrowPeak) [Experiment: ENCSR564TIP] [Life stage: Adult] [TF ChIP-seq peaks]
CREM • HepG2 NGENCUYNUWNBDG • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq HepG2 TF Show metadata Download track Track metadata identifier NGENCUYNUWNBDG data_source ENCODE Download track Download number_of_intervals 1,939 bp_covered 432,273 output_type IDR thresholded peaks genome_build hg38 cell_type HepG2 biosample_type Cell line biosample_term_id EFO:0001187 tissue_category Liver encode_experiment_id ENCSR799FCZ biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CREM assay TF ChIP-seq file_format bed narrowPeak file_size 35,994 downloaded_date 06/12/2022 release_date 06/30/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF190JBW.bed.gz processed_file_md5 3aae2f40f9c7032df4ab2da63e7a4dcc wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF190JBW.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF190JBW.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF190JBW/@@download/ENCFF190JBW.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF190JBW.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 63dc45f9a15c7e70b00ede84379db999 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens CREM;Lab=Richard Myers, HAIB;ENCODE_internal_tags=RegulomeDB_2_2,RegulomeDB_2_1;Life_stage_age=child 15 years;Reference=NR;External_resources=GEO:GSE170149;Project=ENCODE;Award=UM1HG009411;Experiment_date_released=2020-07-09,2016-10-11;Submitted_track_name=pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=HepG2;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_system_slims=exocrine system,endocrine system,digestive system;ENCODE_biosample_term_synonyms=Hep-G2,HepG2 cell;Analysis_title=ENCODE4 v1.4.0 GRCh38;GM=[Method:CRISPR|Category:insertion];schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001187;is_hg38_lifted=no system_category Digestive life_stage Child track_name ENCODE HepG2 (repl. 1, 2) TF ChIP-seq CREM IDR thresholded peaks (narrowPeak) [Experiment: ENCSR799FCZ] [Life stage: Child] [TF ChIP-seq peaks]
CREM • HepG2 NGENCYNSSGYEMG • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq HepG2 TF Show metadata Download track Track metadata identifier NGENCYNSSGYEMG data_source ENCODE Download track Download number_of_intervals 27,730 bp_covered 12,977,882 output_type IDR thresholded peaks genome_build hg38 cell_type HepG2 biosample_type Cell line biosample_term_id EFO:0001187 tissue_category Liver encode_experiment_id ENCSR903ELW biological_replicate 2 technical_replicate 2_1 antibody CREM assay TF ChIP-seq file_format bed narrowPeak file_size 508,782 downloaded_date 06/12/2022 release_date 02/04/2021 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF493HRK.bed.gz processed_file_md5 ca213efbff93aff4039ea63eef66c211 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF493HRK.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF493HRK.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF493HRK/@@download/ENCFF493HRK.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF493HRK.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 2ff3acb56c55cf389aec8d2fb771542f data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens HepG2;Lab=Richard Myers, HAIB;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=child 15 years;Reference=PMID:32728244;External_resources=FactorBook:ENCSR903ELW,GEO:GSE96461;Project=ENCODE;Award=U54HG006998;Experiment_date_released=2016-08-24,2016-06-13,2016-01-08;Submitted_track_name=rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=HepG2;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_system_slims=exocrine system,endocrine system,digestive system;ENCODE_biosample_term_synonyms=Hep-G2,HepG2 cell;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001187;is_hg38_lifted=no system_category Digestive life_stage Child track_name ENCODE HepG2 (repl. 2) TF ChIP-seq CREM IDR thresholded peaks (narrowPeak) [Experiment: ENCSR903ELW] [Life stage: Child] [TF ChIP-seq peaks]
CREM • HepG2 NGENCZE7DNWFHR • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq HepG2 TF Show metadata Download track Track metadata identifier NGENCZE7DNWFHR data_source ENCODE Download track Download number_of_intervals 1,543 bp_covered 357,226 output_type IDR thresholded peaks genome_build hg38 cell_type HepG2 biosample_type Cell line biosample_term_id EFO:0001187 tissue_category Liver encode_experiment_id ENCSR799FCZ biological_replicate 1 technical_replicate 1_1 antibody CREM assay TF ChIP-seq file_format bed narrowPeak file_size 27,326 downloaded_date 06/12/2022 release_date 06/30/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF605FBW.bed.gz processed_file_md5 0a5b05a174315c6465e48b2d2fd9e603 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF605FBW.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF605FBW.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF605FBW/@@download/ENCFF605FBW.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF605FBW.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 b4b73a9e715e199493a11d2dcea4022f data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens CREM;Lab=Richard Myers, HAIB;ENCODE_internal_tags=RegulomeDB_2_2,RegulomeDB_2_1;Life_stage_age=child 15 years;Reference=NR;External_resources=GEO:GSE170149;Project=ENCODE;Award=UM1HG009411;Experiment_date_released=2020-07-09,2016-10-11;Submitted_track_name=rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=HepG2;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_system_slims=exocrine system,endocrine system,digestive system;ENCODE_biosample_term_synonyms=Hep-G2,HepG2 cell;Analysis_title=ENCODE4 v1.4.0 GRCh38;GM=[Method:CRISPR|Category:insertion];schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001187;is_hg38_lifted=no system_category Digestive life_stage Child track_name ENCODE HepG2 (repl. 1) TF ChIP-seq CREM IDR thresholded peaks (narrowPeak) [Experiment: ENCSR799FCZ] [Life stage: Child] [TF ChIP-seq peaks]
CREM • HepG2 NGFTB3GV4T4NR2 • Factorbook34755879 Motif finding HepG2 TFBS Show metadata Download track Track metadata identifier NGFTB3GV4T4NR2 data_source Factorbook Download track Download number_of_intervals 3,021 bp_covered 54,378 output_type transcription factor binding sites all genome_build hg38 cell_type HepG2 biosample_type Cell line biosample_term_id EFO:0001187 tissue_category Liver encode_experiment_id ENCSR903ELW biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CREM assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 49,576 downloaded_date 07/10/2024 release_date 08/24/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF871PDU_CGGCGCBSHSTRATGACG_sorted.bed.gz processed_file_md5 77caf2d224a309a84c64602bfd67e6a8 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF871PDU_CGGCGCBSHSTRATGACG_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF871PDU_CGGCGCBSHSTRATGACG_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF871PDU_CGGCGCBSHSTRATGACG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF871PDU_CGGCGCBSHSTRATGACG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 66339413f8a88ad68b3089a89a0ccf7f data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens HepG2;Original_cell_type=HepG2;Lab=Richard Myers, HAIB;System=exocrine system,endocrine system,digestive system;ENCODE_BED_id=ENCFF871PDU;ENCODE_bigBed_id=ENCFF049UDY;PMID=34755879;Motif_sequence=CGGCGCBSHSTRATGACG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001187;is_hg38_lifted=no system_category Digestive life_stage Child track_name Factorbook HepG2 (repl. 1, 2) Motif finding CREM transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR903ELW] [Life stage: Child] [TFBS]
CREM • HepG2 NGFTB4IQP2FIM7 • Factorbook34755879 Motif finding HepG2 TFBS Show metadata Download track Track metadata identifier NGFTB4IQP2FIM7 data_source Factorbook Download track Download number_of_intervals 10,959 bp_covered 120,549 output_type transcription factor binding sites all genome_build hg38 cell_type HepG2 biosample_type Cell line biosample_term_id EFO:0001187 tissue_category Liver encode_experiment_id ENCSR903ELW biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CREM assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 132,484 downloaded_date 07/10/2024 release_date 08/24/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF871PDU_RVRSCGGAAGT_sorted.bed.gz processed_file_md5 04cea8291b76bb5bcb244f16b6fd1e9a wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF871PDU_RVRSCGGAAGT_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF871PDU_RVRSCGGAAGT_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF871PDU_RVRSCGGAAGT.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF871PDU_RVRSCGGAAGT.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 df326d46cc56a944b8e7949622b2f1da data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens HepG2;Original_cell_type=HepG2;Lab=Richard Myers, HAIB;System=exocrine system,endocrine system,digestive system;ENCODE_BED_id=ENCFF871PDU;ENCODE_bigBed_id=ENCFF049UDY;PMID=34755879;Motif_sequence=RVRSCGGAAGT;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001187;is_hg38_lifted=no system_category Digestive life_stage Child track_name Factorbook HepG2 (repl. 1, 2) Motif finding CREM transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR903ELW] [Life stage: Child] [TFBS]
CREM • K562 NGFTB5YXK3VJ2K • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTB5YXK3VJ2K data_source Factorbook Download track Download number_of_intervals 7,834 bp_covered 227,186 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR077DKV biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CREM assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 185,272 downloaded_date 07/10/2024 release_date 07/07/2014 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF324ELP_GKCGCRRDGCMTBCTGGGARWTGTAGTYY_sorted.bed.gz processed_file_md5 900c0a48026cdfef30e9afce13d8fbb2 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF324ELP_GKCGCRRDGCMTBCTGGGARWTGTAGTYY_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF324ELP_GKCGCRRDGCMTBCTGGGARWTGTAGTYY_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF324ELP_GKCGCRRDGCMTBCTGGGARWTGTAGTYY.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF324ELP_GKCGCRRDGCMTBCTGGGARWTGTAGTYY.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 6e38759372391749638a7c6d1bf7a55d data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Richard Myers, HAIB;System=immune system;ENCODE_BED_id=ENCFF324ELP;ENCODE_bigBed_id=ENCFF180STA;PMID=34755879;Motif_sequence=GKCGCRRDGCMTBCTGGGARWTGTAGTYY;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding CREM transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR077DKV] [Life stage: Adult] [TFBS]
CREM • GM12878 NGFTBCDSJDUY4F • Factorbook34755879 Motif finding GM12878 TFBS Show metadata Download track Track metadata identifier NGFTBCDSJDUY4F data_source Factorbook Download track Download number_of_intervals 8,597 bp_covered 85,970 output_type transcription factor binding sites all genome_build hg38 cell_type GM12878 biosample_type Cell line biosample_term_id EFO:0002784 tissue_category Blood encode_experiment_id ENCSR839XZU biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CREM assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 115,708 downloaded_date 07/10/2024 release_date 07/07/2014 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF294IGP_CRCTTCCGGY_sorted.bed.gz processed_file_md5 feaf225a9fec713271734f985ac090a7 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF294IGP_CRCTTCCGGY_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF294IGP_CRCTTCCGGY_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF294IGP_CRCTTCCGGY.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF294IGP_CRCTTCCGGY.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 c822a02c2229eeedcb8c4d36df7c09ad data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens GM12878;Original_cell_type=GM12878;Lab=Richard Myers, HAIB;System=immune system;ENCODE_BED_id=ENCFF294IGP;ENCODE_bigBed_id=ENCFF391UGE;PMID=34755879;Motif_sequence=CRCTTCCGGY;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002784;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name Factorbook GM12878 (repl. 1, 2) Motif finding CREM transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR839XZU] [TFBS]
CREM • K562 NGFTBJKT6A2ZGR • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBJKT6A2ZGR data_source Factorbook Download track Download number_of_intervals 3,632 bp_covered 54,480 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR077DKV biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CREM assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 60,453 downloaded_date 07/10/2024 release_date 07/07/2014 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF324ELP_RAACTACDWHTCCCA_sorted.bed.gz processed_file_md5 a9bbb5bddf4ae668ad7ae3e77a65367b wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF324ELP_RAACTACDWHTCCCA_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF324ELP_RAACTACDWHTCCCA_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF324ELP_RAACTACDWHTCCCA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF324ELP_RAACTACDWHTCCCA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 f5409484e927773102cb9d3a025a5448 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Richard Myers, HAIB;System=immune system;ENCODE_BED_id=ENCFF324ELP;ENCODE_bigBed_id=ENCFF180STA;PMID=34755879;Motif_sequence=RAACTACDWHTCCCA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding CREM transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR077DKV] [Life stage: Adult] [TFBS]
CREM • HepG2 NGFTBLNEO6ZN3N • Factorbook34755879 Motif finding HepG2 TFBS Show metadata Download track Track metadata identifier NGFTBLNEO6ZN3N data_source Factorbook Download track Download number_of_intervals 908 bp_covered 22,700 output_type transcription factor binding sites significant genome_build hg38 cell_type HepG2 biosample_type Cell line biosample_term_id EFO:0001187 tissue_category Liver encode_experiment_id ENCSR903ELW biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CREM assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 13,990 downloaded_date 07/10/2024 release_date 08/24/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF871PDU_CGCRDDGSATKCTGGGADDYGTAGT_filtered.bed.gz processed_file_md5 d95c0b9eb161b7015100f831f4a896f1 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF871PDU_CGCRDDGSATKCTGGGADDYGTAGT_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF871PDU_CGCRDDGSATKCTGGGADDYGTAGT_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF871PDU_CGCRDDGSATKCTGGGADDYGTAGT.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF871PDU_CGCRDDGSATKCTGGGADDYGTAGT.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 eaa4d2283aa5c0a9a5c6d9f620c65579 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens HepG2;Original_cell_type=HepG2;Lab=Richard Myers, HAIB;System=exocrine system,endocrine system,digestive system;ENCODE_BED_id=ENCFF871PDU;ENCODE_bigBed_id=ENCFF049UDY;PMID=34755879;Motif_sequence=CGCRDDGSATKCTGGGADDYGTAGT;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001187;is_hg38_lifted=no system_category Digestive life_stage Child track_name Factorbook HepG2 (repl. 1, 2) Motif finding CREM transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR903ELW] [Life stage: Child] [TFBS]
CREM • HepG2 NGFTBNLXJ3HW3K • Factorbook34755879 Motif finding HepG2 TFBS Show metadata Download track Track metadata identifier NGFTBNLXJ3HW3K data_source Factorbook Download track Download number_of_intervals 292 bp_covered 5,256 output_type transcription factor binding sites significant genome_build hg38 cell_type HepG2 biosample_type Cell line biosample_term_id EFO:0001187 tissue_category Liver encode_experiment_id ENCSR903ELW biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CREM assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 3,164 downloaded_date 07/10/2024 release_date 08/24/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF871PDU_TBCTGGGARWTGTAGTYC_filtered.bed.gz processed_file_md5 9f10222bdbe9e137bcd604da3fd44b08 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF871PDU_TBCTGGGARWTGTAGTYC_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF871PDU_TBCTGGGARWTGTAGTYC_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF871PDU_TBCTGGGARWTGTAGTYC.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF871PDU_TBCTGGGARWTGTAGTYC.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 2ea858e8796803a35866bbe85847f4f9 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens HepG2;Original_cell_type=HepG2;Lab=Richard Myers, HAIB;System=exocrine system,endocrine system,digestive system;ENCODE_BED_id=ENCFF871PDU;ENCODE_bigBed_id=ENCFF049UDY;PMID=34755879;Motif_sequence=TBCTGGGARWTGTAGTYC;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001187;is_hg38_lifted=no system_category Digestive life_stage Child track_name Factorbook HepG2 (repl. 1, 2) Motif finding CREM transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR903ELW] [Life stage: Child] [TFBS]
CREM • HepG2 NGFTBNPBXAPZ5E • Factorbook34755879 Motif finding HepG2 TFBS Show metadata Download track Track metadata identifier NGFTBNPBXAPZ5E data_source Factorbook Download track Download number_of_intervals 8,002 bp_covered 144,036 output_type transcription factor binding sites all genome_build hg38 cell_type HepG2 biosample_type Cell line biosample_term_id EFO:0001187 tissue_category Liver encode_experiment_id ENCSR903ELW biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CREM assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 129,191 downloaded_date 07/10/2024 release_date 08/24/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF871PDU_TBCTGGGARWTGTAGTYC_sorted.bed.gz processed_file_md5 9499794dddc87474fa7a075bfa32b213 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF871PDU_TBCTGGGARWTGTAGTYC_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF871PDU_TBCTGGGARWTGTAGTYC_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF871PDU_TBCTGGGARWTGTAGTYC.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF871PDU_TBCTGGGARWTGTAGTYC.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 2ea858e8796803a35866bbe85847f4f9 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens HepG2;Original_cell_type=HepG2;Lab=Richard Myers, HAIB;System=exocrine system,endocrine system,digestive system;ENCODE_BED_id=ENCFF871PDU;ENCODE_bigBed_id=ENCFF049UDY;PMID=34755879;Motif_sequence=TBCTGGGARWTGTAGTYC;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001187;is_hg38_lifted=no system_category Digestive life_stage Child track_name Factorbook HepG2 (repl. 1, 2) Motif finding CREM transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR903ELW] [Life stage: Child] [TFBS]
CREM • K562 NGFTBP5AICQETK • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBP5AICQETK data_source Factorbook Download track Download number_of_intervals 7,817 bp_covered 85,987 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR077DKV biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CREM assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 103,122 downloaded_date 07/10/2024 release_date 07/07/2014 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF324ELP_BVTGACGTCAC_sorted.bed.gz processed_file_md5 b44df690e56e79a5efbb54b8a85a60bf wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF324ELP_BVTGACGTCAC_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF324ELP_BVTGACGTCAC_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF324ELP_BVTGACGTCAC.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF324ELP_BVTGACGTCAC.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 db99a8ea190ce3df59d05cd21d78e2b5 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Richard Myers, HAIB;System=immune system;ENCODE_BED_id=ENCFF324ELP;ENCODE_bigBed_id=ENCFF180STA;PMID=34755879;Motif_sequence=BVTGACGTCAC;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding CREM transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR077DKV] [Life stage: Adult] [TFBS]
CREM • GM12878 NGFTBQ3RCQ4SQ6 • Factorbook34755879 Motif finding GM12878 TFBS Show metadata Download track Track metadata identifier NGFTBQ3RCQ4SQ6 data_source Factorbook Download track Download number_of_intervals 780 bp_covered 22,620 output_type transcription factor binding sites significant genome_build hg38 cell_type GM12878 biosample_type Cell line biosample_term_id EFO:0002784 tissue_category Blood encode_experiment_id ENCSR839XZU biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CREM assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 16,888 downloaded_date 07/10/2024 release_date 07/07/2014 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF294IGP_ADGRACTACAWYTCCCAGMAKGCHYBGCG_filtered.bed.gz processed_file_md5 6295a3a03527ed8b2b49e3c9d2cda240 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF294IGP_ADGRACTACAWYTCCCAGMAKGCHYBGCG_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF294IGP_ADGRACTACAWYTCCCAGMAKGCHYBGCG_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF294IGP_ADGRACTACAWYTCCCAGMAKGCHYBGCG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF294IGP_ADGRACTACAWYTCCCAGMAKGCHYBGCG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 480aa8bb003a383e0397713bf0bff2f9 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens GM12878;Original_cell_type=GM12878;Lab=Richard Myers, HAIB;System=immune system;ENCODE_BED_id=ENCFF294IGP;ENCODE_bigBed_id=ENCFF391UGE;PMID=34755879;Motif_sequence=ADGRACTACAWYTCCCAGMAKGCHYBGCG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002784;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name Factorbook GM12878 (repl. 1, 2) Motif finding CREM transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR839XZU] [TFBS]
CREM • K562 NGFTBQ7LHVHAD5 • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBQ7LHVHAD5 data_source Factorbook Download track Download number_of_intervals 771 bp_covered 22,359 output_type transcription factor binding sites significant genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR077DKV biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CREM assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 16,339 downloaded_date 07/10/2024 release_date 07/07/2014 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF324ELP_GKCGCRRDGCMTBCTGGGARWTGTAGTYY_filtered.bed.gz processed_file_md5 3c9e30acb46da845b4b6d5e23aa4c4a4 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF324ELP_GKCGCRRDGCMTBCTGGGARWTGTAGTYY_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF324ELP_GKCGCRRDGCMTBCTGGGARWTGTAGTYY_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF324ELP_GKCGCRRDGCMTBCTGGGARWTGTAGTYY.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF324ELP_GKCGCRRDGCMTBCTGGGARWTGTAGTYY.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 6e38759372391749638a7c6d1bf7a55d data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Richard Myers, HAIB;System=immune system;ENCODE_BED_id=ENCFF324ELP;ENCODE_bigBed_id=ENCFF180STA;PMID=34755879;Motif_sequence=GKCGCRRDGCMTBCTGGGARWTGTAGTYY;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding CREM transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR077DKV] [Life stage: Adult] [TFBS]
CREM • K562 NGFTBQBMJ65KVJ • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBQBMJ65KVJ data_source Factorbook Download track Download number_of_intervals 9,760 bp_covered 185,440 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR077DKV biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CREM assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 179,406 downloaded_date 07/10/2024 release_date 07/07/2014 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF324ELP_CGCSSVSHGRTGACGTCAB_sorted.bed.gz processed_file_md5 cdb97025a7dada3b239204937a8a4c4b wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF324ELP_CGCSSVSHGRTGACGTCAB_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF324ELP_CGCSSVSHGRTGACGTCAB_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF324ELP_CGCSSVSHGRTGACGTCAB.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF324ELP_CGCSSVSHGRTGACGTCAB.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 8aaa1a7fb0481dd98641a4d7f026c5c0 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Richard Myers, HAIB;System=immune system;ENCODE_BED_id=ENCFF324ELP;ENCODE_bigBed_id=ENCFF180STA;PMID=34755879;Motif_sequence=CGCSSVSHGRTGACGTCAB;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding CREM transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR077DKV] [Life stage: Adult] [TFBS]
CREM • GM12878 NGFTBQUAUAEYYQ • Factorbook34755879 Motif finding GM12878 TFBS Show metadata Download track Track metadata identifier NGFTBQUAUAEYYQ data_source Factorbook Download track Download number_of_intervals 3,973 bp_covered 43,703 output_type transcription factor binding sites all genome_build hg38 cell_type GM12878 biosample_type Cell line biosample_term_id EFO:0002784 tissue_category Blood encode_experiment_id ENCSR839XZU biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CREM assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 56,453 downloaded_date 07/10/2024 release_date 07/07/2014 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF294IGP_HRRTGACGTMA_sorted.bed.gz processed_file_md5 076e80f1033b8731fff8949be69ae798 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF294IGP_HRRTGACGTMA_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF294IGP_HRRTGACGTMA_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF294IGP_HRRTGACGTMA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF294IGP_HRRTGACGTMA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 62f1d41da6955109db25450acde99a0d data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens GM12878;Original_cell_type=GM12878;Lab=Richard Myers, HAIB;System=immune system;ENCODE_BED_id=ENCFF294IGP;ENCODE_bigBed_id=ENCFF391UGE;PMID=34755879;Motif_sequence=HRRTGACGTMA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002784;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name Factorbook GM12878 (repl. 1, 2) Motif finding CREM transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR839XZU] [TFBS]
CREM • GM12878 NGFTBRPWKJJVNH • Factorbook34755879 Motif finding GM12878 TFBS Show metadata Download track Track metadata identifier NGFTBRPWKJJVNH data_source Factorbook Download track Download number_of_intervals 4,872 bp_covered 141,288 output_type transcription factor binding sites all genome_build hg38 cell_type GM12878 biosample_type Cell line biosample_term_id EFO:0002784 tissue_category Blood encode_experiment_id ENCSR839XZU biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CREM assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 116,084 downloaded_date 07/10/2024 release_date 07/07/2014 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF294IGP_ADGRACTACAWYTCCCAGMAKGCHYBGCG_sorted.bed.gz processed_file_md5 920af68c7b13c0271b8f2442b83deda6 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF294IGP_ADGRACTACAWYTCCCAGMAKGCHYBGCG_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF294IGP_ADGRACTACAWYTCCCAGMAKGCHYBGCG_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF294IGP_ADGRACTACAWYTCCCAGMAKGCHYBGCG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF294IGP_ADGRACTACAWYTCCCAGMAKGCHYBGCG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 480aa8bb003a383e0397713bf0bff2f9 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens GM12878;Original_cell_type=GM12878;Lab=Richard Myers, HAIB;System=immune system;ENCODE_BED_id=ENCFF294IGP;ENCODE_bigBed_id=ENCFF391UGE;PMID=34755879;Motif_sequence=ADGRACTACAWYTCCCAGMAKGCHYBGCG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002784;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name Factorbook GM12878 (repl. 1, 2) Motif finding CREM transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR839XZU] [TFBS]