ATF2 • HepG2 NGFTBHF6CKCU7M • Factorbook34755879 Motif finding HepG2 TFBS Show metadata Download track Track metadata identifier NGFTBHF6CKCU7M data_source Factorbook Download track Download number_of_intervals 84,971 bp_covered 1,189,594 output_type transcription factor binding sites all genome_build hg38 cell_type HepG2 biosample_type Cell line biosample_term_id EFO:0001187 tissue_category Liver encode_experiment_id ENCSR047BUZ biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ATF2 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 1,314,116 downloaded_date 07/10/2024 release_date 07/08/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF994LMJ_DDNGATGACGTCAT_sorted.bed.gz processed_file_md5 18a46be1ba941aafd22fab9ab7a88b99 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF994LMJ_DDNGATGACGTCAT_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF994LMJ_DDNGATGACGTCAT_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF994LMJ_DDNGATGACGTCAT.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF994LMJ_DDNGATGACGTCAT.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 5dd62f7458235865d46a709082b14c85 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens HepG2;Original_cell_type=HepG2;Lab=Michael Snyder, Stanford;System=exocrine system,endocrine system,digestive system;ENCODE_BED_id=ENCFF994LMJ;ENCODE_bigBed_id=ENCFF955VER;PMID=34755879;Motif_sequence=DDNGATGACGTCAT;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001187;is_hg38_lifted=no system_category Digestive life_stage Child track_name Factorbook HepG2 (repl. 1, 2) Motif finding ATF2 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR047BUZ] [Life stage: Child] [TFBS]
ATF2 • GM12878 NGFTBKKXYX4KTO • Factorbook34755879 Motif finding GM12878 TFBS Show metadata Download track Track metadata identifier NGFTBKKXYX4KTO data_source Factorbook Download track Download number_of_intervals 9,713 bp_covered 145,695 output_type transcription factor binding sites all genome_build hg38 cell_type GM12878 biosample_type Cell line biosample_term_id EFO:0002784 tissue_category Blood encode_experiment_id ENCSR000BQK biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ATF2 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 147,275 downloaded_date 07/10/2024 release_date 02/29/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF973FKS_TNCWGWWATGASTCA_sorted.bed.gz processed_file_md5 8c8b59646f5245dabf79a829867d6c4f wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF973FKS_TNCWGWWATGASTCA_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF973FKS_TNCWGWWATGASTCA_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF973FKS_TNCWGWWATGASTCA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF973FKS_TNCWGWWATGASTCA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 64459f08bd8385ab48c0c7002272c818 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens GM12878;Original_cell_type=GM12878;Lab=Richard Myers, HAIB;System=immune system;ENCODE_BED_id=ENCFF973FKS;ENCODE_bigBed_id=ENCFF521LQJ;PMID=34755879;Motif_sequence=TNCWGWWATGASTCA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002784;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name Factorbook GM12878 (repl. 1, 2) Motif finding ATF2 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BQK] [TFBS]
ATF2 • HepG2 NGFTBN64QSYSXX • Factorbook34755879 Motif finding HepG2 TFBS Show metadata Download track Track metadata identifier NGFTBN64QSYSXX data_source Factorbook Download track Download number_of_intervals 46,080 bp_covered 645,120 output_type transcription factor binding sites all genome_build hg38 cell_type HepG2 biosample_type Cell line biosample_term_id EFO:0001187 tissue_category Liver encode_experiment_id ENCSR047BUZ biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ATF2 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 730,979 downloaded_date 07/10/2024 release_date 07/08/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF994LMJ_TGRTGATGTCATBV_sorted.bed.gz processed_file_md5 76a8025657c299ec3f0612b460010b4f wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF994LMJ_TGRTGATGTCATBV_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF994LMJ_TGRTGATGTCATBV_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF994LMJ_TGRTGATGTCATBV.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF994LMJ_TGRTGATGTCATBV.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 61e800c52048bc5bcad2df3681d2d44b data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens HepG2;Original_cell_type=HepG2;Lab=Michael Snyder, Stanford;System=exocrine system,endocrine system,digestive system;ENCODE_BED_id=ENCFF994LMJ;ENCODE_bigBed_id=ENCFF955VER;PMID=34755879;Motif_sequence=TGRTGATGTCATBV;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001187;is_hg38_lifted=no system_category Digestive life_stage Child track_name Factorbook HepG2 (repl. 1, 2) Motif finding ATF2 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR047BUZ] [Life stage: Child] [TFBS]
ATF2 • H1-hESC NGFTBNOKH5UGMO • Factorbook34755879 Motif finding H1-hESC TFBS Show metadata Download track Track metadata identifier NGFTBNOKH5UGMO data_source Factorbook Download track Download number_of_intervals 3,602 bp_covered 54,030 output_type transcription factor binding sites all genome_build hg38 cell_type H1-hESC biosample_type Cell line biosample_term_id EFO:0003042 tissue_category Embryo encode_experiment_id ENCSR000BQU biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ATF2 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 58,126 downloaded_date 07/10/2024 release_date 02/29/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF352KLD_NVVSATGACRTCAYC_sorted.bed.gz processed_file_md5 4a7e784cc979ba1ab8134379c249c791 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF352KLD_NVVSATGACRTCAYC_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF352KLD_NVVSATGACRTCAYC_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF352KLD_NVVSATGACRTCAYC.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF352KLD_NVVSATGACRTCAYC.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 4012f50e0ceeeec03f5dc0b7350ea149 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens H1;Original_cell_type=H1;Lab=Richard Myers, HAIB;System=NR;ENCODE_BED_id=ENCFF352KLD;ENCODE_bigBed_id=ENCFF295GZO;PMID=34755879;Motif_sequence=NVVSATGACRTCAYC;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0003042;is_hg38_lifted=no system_category Embryo life_stage Unknown track_name Factorbook H1-hESC (repl. 1, 2) Motif finding ATF2 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BQU] [TFBS]
ATF2 • GM12878 NGFTBNQQAEIY4V • Factorbook34755879 Motif finding GM12878 TFBS Show metadata Download track Track metadata identifier NGFTBNQQAEIY4V data_source Factorbook Download track Download number_of_intervals 20,837 bp_covered 229,207 output_type transcription factor binding sites all genome_build hg38 cell_type GM12878 biosample_type Cell line biosample_term_id EFO:0002784 tissue_category Blood encode_experiment_id ENCSR961PPA biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ATF2 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 242,677 downloaded_date 07/10/2024 release_date 10/26/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF213LSA_RTGAYGTCAKV_sorted.bed.gz processed_file_md5 7bbce02303ae877b1adf21ec2264c207 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF213LSA_RTGAYGTCAKV_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF213LSA_RTGAYGTCAKV_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF213LSA_RTGAYGTCAKV.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF213LSA_RTGAYGTCAKV.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 266e84722b1f29573675233daa63bdb5 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens GM12878;Original_cell_type=GM12878;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF213LSA;ENCODE_bigBed_id=ENCFF066HPG;PMID=34755879;Motif_sequence=RTGAYGTCAKV;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002784;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name Factorbook GM12878 (repl. 1, 2) Motif finding ATF2 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR961PPA] [TFBS]
ATF2 • K562 NGFTBPIILPTX6K • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBPIILPTX6K data_source Factorbook Download track Download number_of_intervals 57 bp_covered 1,710 output_type transcription factor binding sites significant genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR869IUD biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ATF2 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 1,286 downloaded_date 07/10/2024 release_date 07/08/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF192ASP_CATGTCTCAATTGAATAACTGTCTTTGTTT_filtered.bed.gz processed_file_md5 5e2f0c63dca228094d35c2bc6592127e wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF192ASP_CATGTCTCAATTGAATAACTGTCTTTGTTT_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF192ASP_CATGTCTCAATTGAATAACTGTCTTTGTTT_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF192ASP_CATGTCTCAATTGAATAACTGTCTTTGTTT.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF192ASP_CATGTCTCAATTGAATAACTGTCTTTGTTT.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 b3e90085a9e10a3e235187a2534e13b9 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF192ASP;ENCODE_bigBed_id=ENCFF139ZZG;PMID=34755879;Motif_sequence=CATGTCTCAATTGAATAACTGTCTTTGTTT;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding ATF2 transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR869IUD] [Life stage: Adult] [TFBS]
ATF2 • GM12878 NGFTBSAPNR3U72 • Factorbook34755879 Motif finding GM12878 TFBS Show metadata Download track Track metadata identifier NGFTBSAPNR3U72 data_source Factorbook Download track Download number_of_intervals 21,049 bp_covered 273,637 output_type transcription factor binding sites all genome_build hg38 cell_type GM12878 biosample_type Cell line biosample_term_id EFO:0002784 tissue_category Blood encode_experiment_id ENCSR961PPA biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ATF2 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 302,710 downloaded_date 07/10/2024 release_date 10/26/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF213LSA_NNRATGACGTCAY_sorted.bed.gz processed_file_md5 5099abfa8dc93ae596301bd2d672ea40 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF213LSA_NNRATGACGTCAY_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF213LSA_NNRATGACGTCAY_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF213LSA_NNRATGACGTCAY.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF213LSA_NNRATGACGTCAY.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 e3aee07d9dbcb926c1c8087ab99ad004 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens GM12878;Original_cell_type=GM12878;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF213LSA;ENCODE_bigBed_id=ENCFF066HPG;PMID=34755879;Motif_sequence=NNRATGACGTCAY;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002784;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name Factorbook GM12878 (repl. 1, 2) Motif finding ATF2 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR961PPA] [TFBS]
ATF2 • HEK293 NGFTBTEHXE76UV • Factorbook34755879 Motif finding HEK293 TFBS Show metadata Download track Track metadata identifier NGFTBTEHXE76UV data_source Factorbook Download track Download number_of_intervals 28,512 bp_covered 313,632 output_type transcription factor binding sites all genome_build hg38 cell_type HEK293 biosample_type Cell line biosample_term_id EFO:0001182 tissue_category Kidney encode_experiment_id ENCSR217HTK biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ATF2 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 341,926 downloaded_date 07/10/2024 release_date 10/07/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF182MPY_RTGAYGTCAYS_sorted.bed.gz processed_file_md5 9e5c45bbd66ca390169da1f66fe0d4d4 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF182MPY_RTGAYGTCAYS_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF182MPY_RTGAYGTCAYS_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF182MPY_RTGAYGTCAYS.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF182MPY_RTGAYGTCAYS.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 4f25c74a085bd40ca6b12583a9ea0622 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens HEK293 genetically modified (insertion) using site-specific recombination targeting H. sapiens ATF2;Original_cell_type=HEK293;Lab=Michael Snyder, Stanford;System=excretory system;ENCODE_BED_id=ENCFF182MPY;ENCODE_bigBed_id=ENCFF194VKZ;PMID=34755879;Motif_sequence=RTGAYGTCAYS;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001182;is_hg38_lifted=no system_category Renal life_stage Unknown track_name Factorbook HEK293 (repl. 1, 2) Motif finding ATF2 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR217HTK] [TFBS]
ATF2 • K562 NGFTBTREMFADGE • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBTREMFADGE data_source Factorbook Download track Download number_of_intervals 4,961 bp_covered 148,830 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR869IUD biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ATF2 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 118,574 downloaded_date 07/10/2024 release_date 07/08/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF192ASP_CAAGTCRYAAAACATGTTTTTCCTTGAAAA_sorted.bed.gz processed_file_md5 774cc6f75ff29ad1abf284ea612f6d90 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF192ASP_CAAGTCRYAAAACATGTTTTTCCTTGAAAA_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF192ASP_CAAGTCRYAAAACATGTTTTTCCTTGAAAA_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF192ASP_CAAGTCRYAAAACATGTTTTTCCTTGAAAA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF192ASP_CAAGTCRYAAAACATGTTTTTCCTTGAAAA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 e3612421833df16922d677afd196f5b7 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF192ASP;ENCODE_bigBed_id=ENCFF139ZZG;PMID=34755879;Motif_sequence=CAAGTCRYAAAACATGTTTTTCCTTGAAAA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding ATF2 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR869IUD] [Life stage: Adult] [TFBS]
ATF2 • K562 NGFTBW7JUWI5JB • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBW7JUWI5JB data_source Factorbook Download track Download number_of_intervals 6,086 bp_covered 182,580 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR869IUD biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ATF2 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 143,475 downloaded_date 07/10/2024 release_date 07/08/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF192ASP_CATGTCTCAATTGAATAACTGTCTTTGTTT_sorted.bed.gz processed_file_md5 0a15c318f5c90cd064af844a5a0f0bd2 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF192ASP_CATGTCTCAATTGAATAACTGTCTTTGTTT_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF192ASP_CATGTCTCAATTGAATAACTGTCTTTGTTT_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF192ASP_CATGTCTCAATTGAATAACTGTCTTTGTTT.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF192ASP_CATGTCTCAATTGAATAACTGTCTTTGTTT.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 b3e90085a9e10a3e235187a2534e13b9 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF192ASP;ENCODE_bigBed_id=ENCFF139ZZG;PMID=34755879;Motif_sequence=CATGTCTCAATTGAATAACTGTCTTTGTTT;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding ATF2 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR869IUD] [Life stage: Adult] [TFBS]
ATF2 • HEK293 NGFTBXHUF74XFL • Factorbook34755879 Motif finding HEK293 TFBS Show metadata Download track Track metadata identifier NGFTBXHUF74XFL data_source Factorbook Download track Download number_of_intervals 25,420 bp_covered 279,620 output_type transcription factor binding sites all genome_build hg38 cell_type HEK293 biosample_type Cell line biosample_term_id EFO:0001182 tissue_category Kidney encode_experiment_id ENCSR217HTK biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ATF2 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 337,147 downloaded_date 07/10/2024 release_date 10/07/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF182MPY_GRTGACGTCAY_sorted.bed.gz processed_file_md5 63432fe31eaad55d397cd7aee99bf7be wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF182MPY_GRTGACGTCAY_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF182MPY_GRTGACGTCAY_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF182MPY_GRTGACGTCAY.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF182MPY_GRTGACGTCAY.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 b13459a43f4be9cef236ed34fcb3e55e data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens HEK293 genetically modified (insertion) using site-specific recombination targeting H. sapiens ATF2;Original_cell_type=HEK293;Lab=Michael Snyder, Stanford;System=excretory system;ENCODE_BED_id=ENCFF182MPY;ENCODE_bigBed_id=ENCFF194VKZ;PMID=34755879;Motif_sequence=GRTGACGTCAY;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001182;is_hg38_lifted=no system_category Renal life_stage Unknown track_name Factorbook HEK293 (repl. 1, 2) Motif finding ATF2 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR217HTK] [TFBS]
ATF2 • GM12878 NGFTBYIVS57POT • Factorbook34755879 Motif finding GM12878 TFBS Show metadata Download track Track metadata identifier NGFTBYIVS57POT data_source Factorbook Download track Download number_of_intervals 19,611 bp_covered 215,721 output_type transcription factor binding sites all genome_build hg38 cell_type GM12878 biosample_type Cell line biosample_term_id EFO:0002784 tissue_category Blood encode_experiment_id ENCSR000BQK biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ATF2 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 256,350 downloaded_date 07/10/2024 release_date 02/29/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF973FKS_RRAAVWGAAAV_sorted.bed.gz processed_file_md5 4feadb1db16fd1567e370491527d3828 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF973FKS_RRAAVWGAAAV_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF973FKS_RRAAVWGAAAV_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF973FKS_RRAAVWGAAAV.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF973FKS_RRAAVWGAAAV.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 e653ba298de1fdd4a49f06b3fd957342 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens GM12878;Original_cell_type=GM12878;Lab=Richard Myers, HAIB;System=immune system;ENCODE_BED_id=ENCFF973FKS;ENCODE_bigBed_id=ENCFF521LQJ;PMID=34755879;Motif_sequence=RRAAVWGAAAV;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002784;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name Factorbook GM12878 (repl. 1, 2) Motif finding ATF2 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BQK] [TFBS]
ATF2 • K562 NGFTBYUJU45S3I • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBYUJU45S3I data_source Factorbook Download track Download number_of_intervals 66 bp_covered 1,980 output_type transcription factor binding sites significant genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR869IUD biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ATF2 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 1,460 downloaded_date 07/10/2024 release_date 07/08/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF192ASP_CAAGTCRYAAAACATGTTTTTCCTTGAAAA_filtered.bed.gz processed_file_md5 7cd102a1225c69eb457b3ac2b16138eb wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF192ASP_CAAGTCRYAAAACATGTTTTTCCTTGAAAA_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF192ASP_CAAGTCRYAAAACATGTTTTTCCTTGAAAA_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF192ASP_CAAGTCRYAAAACATGTTTTTCCTTGAAAA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF192ASP_CAAGTCRYAAAACATGTTTTTCCTTGAAAA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 e3612421833df16922d677afd196f5b7 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF192ASP;ENCODE_bigBed_id=ENCFF139ZZG;PMID=34755879;Motif_sequence=CAAGTCRYAAAACATGTTTTTCCTTGAAAA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding ATF2 transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR869IUD] [Life stage: Adult] [TFBS]
Reference annotation (ATF2) NGHOMC4NXKBT6Z • HOMER20513432 Motif finding Reference annotation (ATF2) TFBS Show metadata Download track Track metadata identifier NGHOMC4NXKBT6Z data_source HOMER Download track Download number_of_intervals 696,280 bp_covered 8,355,360 output_type transcription factor binding sites genome_build hg38 cell_type Not applicable biosample_type Not applicable biosample_term_id Not applicable tissue_category Not applicable encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody ATF2 assay Motif finding file_format bed bed6+5 Homer file_size 7,453,830 downloaded_date 08/12/2023 release_date 10/19/2020 date_added_to_filer 12/19/2025 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Homer/bed11/hg38/Atf2_bZIP.hg38.processed.bed.gz processed_file_md5 3668b1ea09953fbedb04b6126e6df190 wget_command wget https://filer2.niagads.org/Annotationtracks/Homer/bed11/hg38/Atf2_bZIP.hg38.processed.bed.gz -P GADB/Annotationtracks/Homer/bed11/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Homer/bed11/hg38/Atf2_bZIP.hg38.processed.bed.gz.tbi -P GADB/Annotationtracks/Homer/bed11/hg38/ link_out_url https://homer.ucsd.edu/homer/ raw_file_url https://homer.ucsd.edu/homer/data/motifs/homer.KnownMotifs.hg38.191020.bed.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/Homer/homer.KnownMotifs.hg38.191020.bed.gz -P GADB/Annotationtracks/Downloads/Homer/ raw_file_md5 7f59c5d4bbf50fea7476a173961ea174 data_category TFBS [Transcription Factor Binding Site] Genomic feature type HOMER transcription factor binding sites track_description version=191020;TF_name=Atf2;DNA_binding_domain=bZIP;Cell_type=3T3L1;Assay=ChIP-Seq;Origin=GSE56872;schema=BED6+5;dataSource_pubmed_id=20513432;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/HOMER.html;original_biosample_term_id=Not applicable;is_hg38_lifted=no system_category Not applicable life_stage Not applicable track_name HOMER Motif finding ATF2 transcription factor binding sites (bed6+5 Homer) [TFBS]
ATF3 • A549 NGENC2A4AW7N7B • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq A549 TF Show metadata Download track Track metadata identifier NGENC2A4AW7N7B data_source ENCODE Download track Download number_of_intervals 9,853 bp_covered 4,602,945 output_type conservative IDR thresholded peaks genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR000BPS biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ATF3 assay TF ChIP-seq file_format bed narrowPeak file_size 184,227 downloaded_date 07/10/2025 release_date 01/02/2021 date_added_to_filer 07/30/2025 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF434HZA.bed.gz processed_file_md5 82bf52411a4f61b2cd5913cc85779237 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF434HZA.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF434HZA.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF434HZA/@@download/ENCFF434HZA.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF434HZA.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 1d583b9b8d3563ed9045a5288481cc14 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq conservative IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens A549 treated with 0.02% ethanol for 1 hour;Lab=Richard Myers, HAIB;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=adult 58 years;Reference=PMID:32728046;External_resources=FactorBook:ENCSR000BPS,UCSC-ENCODE-hg19:wgEncodeEH002288,GEO:GSM1010789;Project=ENCODE;Award=U54HG004576;Experiment_date_released=2012-02-29;Submitted_track_name=rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=A549;ENCODE_cell_slims=cancer cell;ENCODE_system_slims=respiratory system;ENCODE_biosample_term_synonyms=A-549,A549 cell;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name ENCODE A549 (repl. 1, 2) TF ChIP-seq ATF3 conservative IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000BPS] [Life stage: Adult] [TF ChIP-seq peaks]
ATF3 • K562 NGENC2KTAQB6QW • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq K562 TF Show metadata Download track Track metadata identifier NGENC2KTAQB6QW data_source ENCODE Download track Download number_of_intervals 6,372 bp_covered 1,412,207 output_type conservative IDR thresholded peaks genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR000BNU biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ATF3 assay TF ChIP-seq file_format bed narrowPeak file_size 117,343 downloaded_date 06/12/2022 release_date 12/26/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF503PUI.bed.gz processed_file_md5 a33fbd9aed8ed3a5ca9ea087ef3274f9 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF503PUI.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF503PUI.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF503PUI/@@download/ENCFF503PUI.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF503PUI.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 618a5d2015d88978001ff91ea06cf911 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq conservative IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens K562;Lab=Richard Myers, HAIB;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=adult 53 years;Reference=PMID:32728046;External_resources=FactorBook:ENCSR000BNU,GEO:GSM803380,UCSC-ENCODE-hg19:wgEncodeEH001662;Project=ENCODE;Award=U54HG004576;Experiment_date_released=2011-07-18;Submitted_track_name=rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=hematopoietic cell,leukocyte,cancer cell;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=K562 cell,K-562 cell,K-562;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name ENCODE K562 (repl. 1, 2) TF ChIP-seq ATF3 conservative IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000BNU] [Life stage: Adult] [TF ChIP-seq peaks]
ATF3 • K562 NGENC35XM3HPDK • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq K562 TF Show metadata Download track Track metadata identifier NGENC35XM3HPDK data_source ENCODE Download track Download number_of_intervals 5,360 bp_covered 2,454,423 output_type IDR thresholded peaks genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR568ZXG biological_replicate 1 technical_replicate 1_1 antibody ATF3 assay TF ChIP-seq file_format bed narrowPeak file_size 106,198 downloaded_date 07/10/2025 release_date 12/19/2022 date_added_to_filer 07/30/2025 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF465XKG.bed.gz processed_file_md5 ead46491388a577502fd7a1f26de6233 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF465XKG.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF465XKG.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF465XKG/@@download/ENCFF465XKG.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF465XKG.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 4c2ded375dd4e80d9c2c4dfcc5b55f78 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens K562 genetically modified (insertion) using CRISPR targeting H. sapiens ATF3;Lab=Richard Myers, HAIB;ENCODE_internal_tags=RegulomeDB_2_2;Life_stage_age=adult 53 years;Reference=NR;External_resources=GEO:GSE230937;Project=ENCODE;Award=UM1HG009411;Experiment_date_released=2023-01-06,2022-09-26;Submitted_track_name=rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=hematopoietic cell,leukocyte,cancer cell;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=K562 cell,K-562 cell,K-562;Analysis_title=ENCODE4 v1.8.1 GRCh38;GM=[Method:CRISPR|Category:insertion];schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name ENCODE K562 (repl. 1) TF ChIP-seq ATF3 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR568ZXG] [Life stage: Adult] [TF ChIP-seq peaks]
ATF3 • HepG2 NGENC4AXHO2DIQ • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq HepG2 TF Show metadata Download track Track metadata identifier NGENC4AXHO2DIQ data_source ENCODE Download track Download number_of_intervals 4,235 bp_covered 905,504 output_type IDR thresholded peaks genome_build hg38 cell_type HepG2 biosample_type Cell line biosample_term_id EFO:0001187 tissue_category Liver encode_experiment_id ENCSR000BKE biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ATF3 assay TF ChIP-seq file_format bed narrowPeak file_size 78,700 downloaded_date 06/12/2022 release_date 01/06/2021 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF928LDD.bed.gz processed_file_md5 d3ffed275849550d5851f9bffa026656 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF928LDD.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF928LDD.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF928LDD/@@download/ENCFF928LDD.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF928LDD.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 f585ddfd05dcee9c94720dd90d00df43 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens HepG2;Lab=Richard Myers, HAIB;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=child 15 years;Reference=PMID:32728244;External_resources=FactorBook:ENCSR000BKE,GEO:GSM803503,UCSC-ENCODE-hg19:wgEncodeEH001568;Project=ENCODE;Award=U54HG004576;Experiment_date_released=2011-07-18;Submitted_track_name=pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=HepG2;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_system_slims=exocrine system,endocrine system,digestive system;ENCODE_biosample_term_synonyms=Hep-G2,HepG2 cell;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001187;is_hg38_lifted=no system_category Digestive life_stage Child track_name ENCODE HepG2 (repl. 1, 2) TF ChIP-seq ATF3 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000BKE] [Life stage: Child] [TF ChIP-seq peaks]
ATF3 • K562 NGENC4I7TZDRZV • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq K562 TF Show metadata Download track Track metadata identifier NGENC4I7TZDRZV data_source ENCODE Download track Download number_of_intervals 48,705 bp_covered 19,439,936 output_type conservative IDR thresholded peaks genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR028UIU biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ATF3 assay TF ChIP-seq file_format bed narrowPeak file_size 914,733 downloaded_date 06/12/2022 release_date 12/09/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF053UXK.bed.gz processed_file_md5 c803033dc6347f4467e1bae3c7825603 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF053UXK.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF053UXK.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF053UXK/@@download/ENCFF053UXK.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF053UXK.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 f4667f9625119fa852d3f261ff4df5ee data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq conservative IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens K562;Lab=Michael Snyder, Stanford;ENCODE_internal_tags=RegulomeDB_2_2,RegulomeDB_2_1,DREAM,RegulomeDB_1_0,ENCYCLOPEDIAv2,RegulomeDB_2_0;Life_stage_age=adult 53 years;Reference=PMCID:PMC6724667;External_resources=FactorBook:ENCSR028UIU,GEO:GSE127358;Project=ENCODE;Award=U54HG006996;Experiment_date_released=2016-07-08,2016-09-20,2014-07-07;Submitted_track_name=rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=hematopoietic cell,leukocyte,cancer cell;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=K562 cell,K-562 cell,K-562;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name ENCODE K562 (repl. 1, 2) TF ChIP-seq ATF3 conservative IDR thresholded peaks (narrowPeak) [Experiment: ENCSR028UIU] [Life stage: Adult] [TF ChIP-seq peaks]
ATF3 • K562 NGENC4NWUPLHXZ • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq K562 TF Show metadata Download track Track metadata identifier NGENC4NWUPLHXZ data_source ENCODE Download track Download number_of_intervals 1,204 bp_covered 294,718 output_type conservative IDR thresholded peaks genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR000DOG biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ATF3 assay TF ChIP-seq file_format bed narrowPeak file_size 23,084 downloaded_date 06/12/2022 release_date 12/26/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF654BXG.bed.gz processed_file_md5 15e1f7f344f123bfe83f351766ac44ad wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF654BXG.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF654BXG.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF654BXG/@@download/ENCFF654BXG.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF654BXG.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 2ce67e33300fcb87091331b510e460c6 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq conservative IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens K562;Lab=Kevin Struhl, HMS;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=adult 53 years;Reference=PMID:32728046;External_resources=FactorBook:ENCSR000DOG,GEO:GSM935391,UCSC-ENCODE-hg19:wgEncodeEH000700;Project=ENCODE;Award=U54HG004558;Experiment_date_released=2011-10-29;Submitted_track_name=rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=hematopoietic cell,leukocyte,cancer cell;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=K562 cell,K-562 cell,K-562;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name ENCODE K562 (repl. 1, 2) TF ChIP-seq ATF3 conservative IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000DOG] [Life stage: Adult] [TF ChIP-seq peaks]