CTCF • HepG2 NGENCPYAOCJIKY • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq HepG2 TF Show metadata Download track Track metadata identifier NGENCPYAOCJIKY data_source ENCODE Download track Download number_of_intervals 34,661 bp_covered 7,712,451 output_type conservative IDR thresholded peaks genome_build hg38 cell_type HepG2 biosample_type Cell line biosample_term_id EFO:0001187 tissue_category Liver encode_experiment_id ENCSR000AMA biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CTCF assay TF ChIP-seq file_format bed narrowPeak file_size 605,600 downloaded_date 06/12/2022 release_date 09/26/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF694GIO.bed.gz processed_file_md5 45639996810408750b2112a1f44c5f18 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF694GIO.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF694GIO.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF694GIO/@@download/ENCFF694GIO.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF694GIO.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 91e4a54f36d74f90c9d6eee32d73ddfa data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq CTCF conservative IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens HepG2;Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_1_0,ccre_inputv2,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=child 15 years;Reference=PMID:32728046;External_resources=FactorBook:ENCSR000AMA,GEO:GSM733645,UCSC-ENCODE-hg19:wgEncodeEH000080,SCREEN-GRCh38:HepG2;Project=ENCODE;Award=U54HG004570;Experiment_date_released=2011-02-10,2017-02-06;Submitted_track_name=rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=HepG2;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_system_slims=exocrine system,endocrine system,digestive system;ENCODE_biosample_term_synonyms=Hep-G2,HepG2 cell;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001187;is_hg38_lifted=no system_category Digestive life_stage Child track_name ENCODE HepG2 (repl. 1, 2) TF ChIP-seq CTCF conservative IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000AMA] [Life stage: Child] [TF ChIP-seq peaks]
CTCF • Pancreas NGENCPYDEMTMF2 • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq Pancreas TF Show metadata Download track Track metadata identifier NGENCPYDEMTMF2 data_source ENCODE Download track Download number_of_intervals 29,786 bp_covered 10,778,234 output_type IDR thresholded peaks genome_build hg38 cell_type Pancreas biosample_type Tissue biosample_term_id UBERON:0001264 tissue_category Pancreas encode_experiment_id ENCSR253ALG biological_replicate 1 technical_replicate 1_1, 1_2 antibody CTCF assay TF ChIP-seq file_format bed narrowPeak file_size 512,267 downloaded_date 06/12/2022 release_date 07/09/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF372XNU.bed.gz processed_file_md5 0ed6266322bb6e5ae1307a5b9a9c08c7 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF372XNU.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF372XNU.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF372XNU/@@download/ENCFF372XNU.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF372XNU.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 a39355b4313ed54ae2966c4f68bec4ec data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq CTCF IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens pancreas tissue female adult (61 years);Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_2_2,RegulomeDB_2_1;Life_stage_age=adult 61 years;Reference=NR;External_resources=GEO:GSE175133;Project=ENCODE;Award=UM1HG009390;Experiment_date_released=2021-04-13,2020-07-06;Submitted_track_name=rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=pancreas;ENCODE_cell_slims=NR;ENCODE_system_slims=NR;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.5.0 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=UBERON:0001264;is_hg38_lifted=no system_category Endocrine life_stage Adult track_name ENCODE Pancreas (repl. 1) TF ChIP-seq CTCF IDR thresholded peaks (narrowPeak) [Experiment: ENCSR253ALG] [Life stage: Adult] [TF ChIP-seq peaks]
CTCF • Adrenal gland NGENCPYL2YVJ7S • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq Adrenal gland TF Show metadata Download track Track metadata identifier NGENCPYL2YVJ7S data_source ENCODE Download track Download number_of_intervals 32,031 bp_covered 8,802,127 output_type IDR thresholded peaks genome_build hg38 cell_type Adrenal gland biosample_type Tissue biosample_term_id UBERON:0002369 tissue_category Endocrine encode_experiment_id ENCSR014GSQ biological_replicate 1 technical_replicate 1_1 antibody CTCF assay TF ChIP-seq file_format bed narrowPeak file_size 593,091 downloaded_date 06/12/2022 release_date 09/01/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF282ZUL.bed.gz processed_file_md5 e55bcca11d94da85e0e0686c97c8c9de wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF282ZUL.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF282ZUL.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF282ZUL/@@download/ENCFF282ZUL.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF282ZUL.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 99c9d3f89fad7d1aec9a312917a970f1 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq CTCF IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens adrenal gland tissue female adult (51 years);Lab=Michael Snyder, Stanford;ENCODE_internal_tags=ccre_inputv2,ENTEx,ENCYCLOPEDIAv2,RegulomeDB_2_1,RegulomeDB_2_2;Life_stage_age=adult 51 years;Reference=NR;External_resources=GEO:GSE105198,SCREEN-GRCh38:adrenal_gland_female_adult_51_years,FactorBook:ENCSR014GSQ;Project=ENCODE;Award=U54HG006996;Experiment_date_released=2016-12-13;Submitted_track_name=rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=adrenal gland;ENCODE_cell_slims=NR;ENCODE_system_slims=endocrine system;ENCODE_biosample_term_synonyms=glandula adrenalis,glandula suprarenalis;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=UBERON:0002369;is_hg38_lifted=no system_category Endocrine life_stage Adult track_name ENCODE Adrenal gland (repl. 1) TF ChIP-seq CTCF IDR thresholded peaks (narrowPeak) [Experiment: ENCSR014GSQ] [Life stage: Adult] [TF ChIP-seq peaks]
CTCF • Middle frontal area BA46 NGENCPYSSEGZKY • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq Middle frontal area BA46 TF Show metadata Download track Track metadata identifier NGENCPYSSEGZKY data_source ENCODE Download track Download number_of_intervals 45,131 bp_covered 17,999,379 output_type IDR thresholded peaks genome_build hg38 cell_type Middle frontal area BA46 biosample_type Tissue biosample_term_id UBERON:0006483 tissue_category Brain encode_experiment_id ENCSR244KEW biological_replicate 1 technical_replicate 1_1, 1_2 antibody CTCF assay TF ChIP-seq file_format bed narrowPeak file_size 785,178 downloaded_date 06/12/2022 release_date 06/23/2021 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF354RKX.bed.gz processed_file_md5 835db1343b38c3746244f6ffb30e807e wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF354RKX.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF354RKX.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF354RKX/@@download/ENCFF354RKX.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF354RKX.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 932ddbf60d1ef3233e85ff0da17391af data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq CTCF IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens with mild cognitive impairment| dorsolateral prefrontal cortex tissue female adult (88 years);Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RushAD,RegulomeDB_2_2,RegulomeDB_2_1;Life_stage_age=adult 88 years;Reference=NR;External_resources=GEO:GSE187171;Project=ENCODE;Award=UM1HG009390;Experiment_date_released=2021-07-23,2021-06-21;Submitted_track_name=rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=dorsolateral prefrontal cortex;ENCODE_cell_slims=NR;ENCODE_system_slims=central nervous system;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.8.0 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=UBERON:0006483;is_hg38_lifted=no system_category Nervous life_stage Adult track_name ENCODE Middle frontal area BA46 (repl. 1) TF ChIP-seq CTCF IDR thresholded peaks (narrowPeak) [Experiment: ENCSR244KEW] [Life stage: Adult] [TF ChIP-seq peaks]
CTCF • HCT116 NGENCPYZCGPKDB • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq HCT116 TF Show metadata Download track Track metadata identifier NGENCPYZCGPKDB data_source ENCODE Download track Download number_of_intervals 49,313 bp_covered 21,204,750 output_type IDR thresholded peaks genome_build hg38 cell_type HCT116 biosample_type Cell line biosample_term_id EFO:0002824 tissue_category Digestive encode_experiment_id ENCSR216SIK biological_replicate 1 technical_replicate 1_1, 1_2 antibody CTCF assay TF ChIP-seq file_format bed narrowPeak file_size 957,635 downloaded_date 07/10/2025 release_date 07/20/2022 date_added_to_filer 07/30/2025 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF360PAK.bed.gz processed_file_md5 2f4c7f424bf1d63a005df21dc01751ba wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF360PAK.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF360PAK.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF360PAK/@@download/ENCFF360PAK.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF360PAK.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 7f8c601200a74b9c7a8f90f3bd2019f7 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq CTCF IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens HCT116 genetically modified (insertion) using CRISPR inserting O. sativa LOC4335696, (insertion) using CRISPR targeting H. sapiens RAD21;Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_2_2,Degron,RegulomeDB_2_1;Life_stage_age=adult 48 years;Reference=NR;External_resources=GEO:GSE231257;Project=ENCODE;Award=UM1HG009390;Experiment_date_released=2022-07-21;Submitted_track_name=rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=HCT116;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_system_slims=digestive system;ENCODE_biosample_term_synonyms=HCT116 cell,HCT-116 cell;Analysis_title=ENCODE4 v1.8.0 GRCh38;GM=[Method:CRISPR|Category:insertion];schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002824;is_hg38_lifted=no system_category Digestive life_stage Adult track_name ENCODE HCT116 (repl. 1) TF ChIP-seq CTCF IDR thresholded peaks (narrowPeak) [Experiment: ENCSR216SIK] [Life stage: Adult] [TF ChIP-seq peaks]
CTCF • CD4+ alpha-beta T cell NGENCPZYSWJ7TL • ENCODE22955616 | 41168159 | 31713622 ChIA-PET CD4+ alpha-beta T cell Chromatin interactions Show metadata Download track Track metadata identifier NGENCPZYSWJ7TL data_source ENCODE Download track Download number_of_intervals 1,498,526 bp_covered 1,511,677,555 output_type chromatin interactions genome_build hg38 cell_type CD4+ alpha-beta T cell biosample_type Primary cell biosample_term_id CL:0000624 tissue_category Blood encode_experiment_id ENCSR962FFY biological_replicate 1 technical_replicate 1_1 antibody CTCF assay ChIA-PET file_format bed bed4+19 interact file_size 61,929,190 downloaded_date 09/20/2025 release_date 07/16/2021 date_added_to_filer 10/27/2025 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/loops/ChIA-PET/bed4plus19_interact/hg38/formatted_output_ENCFF939ZKJ.bed.gz processed_file_md5 d74ea0ad17a2831d01b00e09a3692c99 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/loops/ChIA-PET/bed4plus19_interact/hg38/formatted_output_ENCFF939ZKJ.bed.gz -P FILER2/Annotationtracks/ENCODE/loops/ChIA-PET/bed4plus19_interact/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/loops/ChIA-PET/bed4plus19_interact/hg38/formatted_output_ENCFF939ZKJ.bed.gz.tbi -P FILER2/Annotationtracks/ENCODE/loops/ChIA-PET/bed4plus19_interact/hg38/ link_out_url https://www.encodeproject.org/ raw_file_url https://www.encodeproject.org/files/ENCFF939ZKJ/@@download/ENCFF939ZKJ.bedpe.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/chromatin_interaction/ENCFF939ZKJ.bedpe.gz -P FILER2/Annotationtracks/Downloads/ENCODE/chromatin_interaction/ raw_file_md5 6fca9c86581d9732ecac910b5bcaa7c4 data_category Chromatin interactions Genomic feature type ChIA-PET chromatin interactions track_description version=2024;Biosample_summary=Homo sapiens activated CD4-positive, alpha-beta T cell male adult (20 years) treated with 10 ng/mL Interleukin-2 for 5 days, anti-CD3 and anti-CD28 coated beads for 7 days;Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=adult 20 years;Reference=NR;External_resources=GEO:GSE187786;Project=ENCODE;Award=UM1HG009409;Experiment_date_released=2021-07-21;Submitted_track_name=LHT0035H.e500.clusters.cis.BE3.gz;ENCODE_preferred_default=true;ENCODE_biosample_term_name=activated CD4-positive, alpha-beta T cell;ENCODE_cell_slims=CD4+ T cell,leukocyte,T cell,hematopoietic cell;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=activated CD4-positive, alpha-beta T-lymphocyte,activated CD4-positive, alpha-beta T lymphocyte,activated CD4-positive, alpha-beta T-cell;Analysis_title=Lab custom GRCh38;GM=NR;Fragmentation_method=sonication (Branson Sonifier 250);Library_size=350-600;schema=BED4+19;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=CL:0000896;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name ENCODE CD4+ alpha-beta T cell (repl. 1) ChIA-PET CTCF chromatin interactions (bed4+19 interact) [Experiment: ENCSR962FFY] [Life stage: Adult] [Chromatin interactions]
CTCF • OCI-LY7 NGENCQ3ATZ2PAT • ENCODE22955616 | 41168159 | 31713622 ChIA-PET OCI-LY7 Chromatin interactions Show metadata Download track Track metadata identifier NGENCQ3ATZ2PAT data_source ENCODE Download track Download number_of_intervals 486,770 bp_covered 161,707,846 output_type peaks genome_build hg38 cell_type OCI-LY7 biosample_type Cell line biosample_term_id EFO:0006711 tissue_category Blood encode_experiment_id ENCSR401JWQ biological_replicate 1 technical_replicate 1_1 antibody CTCF assay ChIA-PET file_format bed narrowPeak file_size 11,521,181 downloaded_date 05/15/2024 release_date 06/21/2022 date_added_to_filer 08/22/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/ChIA-PET/narrowPeak/hg38/ENCFF227DVJ.bed.gz processed_file_md5 fc82cbc96afe8ebd3ef0d33886d878ce wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/ChIA-PET/narrowPeak/hg38/ENCFF227DVJ.bed.gz -P GADB/Annotationtracks/ENCODE/data/ChIA-PET/narrowPeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/ChIA-PET/narrowPeak/hg38/ENCFF227DVJ.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/ChIA-PET/narrowPeak/hg38/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF227DVJ/@@download/ENCFF227DVJ.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF227DVJ.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 c3abdaec63185a1cee4dc209fe31eb64 data_category Chromatin interactions Genomic feature type ChIA-PET CTCF peaks track_description version=2024;Biosample_summary=Homo sapiens OCI-LY7;Lab=Charles Lee;ENCODE_internal_tags=Deeply Profiled;Life_stage_age=adult 48 years;Reference=NR;External_resources=GEO:GSE242617;Project=ENCODE;Award=3UM1HG009409-04S1;Experiment_date_released=2022-06-27;Submitted_track_name=LHO1005.no_input_all_peaks.maxscore1000.narrowPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=OCI-LY7;ENCODE_cell_slims=B cell,cancer cell,leukocyte,hematopoietic cell;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=NR;Analysis_title=Lab custom GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0006711;is_hg38_lifted=no;narrowPeak_filter=qValueLog10 system_category Cardiovascular life_stage Adult track_name ENCODE OCI-LY7 (repl. 1) ChIA-PET CTCF peaks (narrowPeak) [Experiment: ENCSR401JWQ] [Life stage: Adult] [Chromatin interactions]
CTCF • Gastroesophageal sphincter NGENCQ3F3GSKQP • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq Gastroesophageal sphincter TF Show metadata Download track Track metadata identifier NGENCQ3F3GSKQP data_source ENCODE Download track Download number_of_intervals 40,222 bp_covered 15,639,845 output_type IDR thresholded peaks genome_build hg38 cell_type Gastroesophageal sphincter biosample_type Tissue biosample_term_id UBERON:0004550 tissue_category Digestive encode_experiment_id ENCSR146BGM biological_replicate 1 technical_replicate 1_1 antibody CTCF assay TF ChIP-seq file_format bed narrowPeak file_size 737,402 downloaded_date 06/12/2022 release_date 09/01/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF125ESZ.bed.gz processed_file_md5 d4808cdbad5b9edc0cf49cfd65044e80 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF125ESZ.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF125ESZ.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF125ESZ/@@download/ENCFF125ESZ.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF125ESZ.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 391eb38d22382cdd79826fa7950e2249 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq CTCF IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens gastroesophageal sphincter tissue female adult (51 years);Lab=Michael Snyder, Stanford;ENCODE_internal_tags=ccre_inputv2,ENTEx,ENCYCLOPEDIAv2,RegulomeDB_2_1,RegulomeDB_2_2;Life_stage_age=adult 51 years;Reference=NR;External_resources=GEO:GSE127433,SCREEN-GRCh38:gastroesophageal_sphincter_female_adult_51_year,FactorBook:ENCSR146BGM;Project=ENCODE;Award=U54HG006996;Experiment_date_released=2016-07-11,2016-05-18;Submitted_track_name=rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=gastroesophageal sphincter;ENCODE_cell_slims=NR;ENCODE_system_slims=musculature,digestive system;ENCODE_biosample_term_synonyms=gastroesophageal sphincter,inferior esophageal sphincter,gastroesophageal sphincter muscle,cardiac sphincter;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=UBERON:0004550;is_hg38_lifted=no system_category Digestive life_stage Adult track_name ENCODE Gastroesophageal sphincter (repl. 1) TF ChIP-seq CTCF IDR thresholded peaks (narrowPeak) [Experiment: ENCSR146BGM] [Life stage: Adult] [TF ChIP-seq peaks]
CTCF • Epithelial cell NGENCQ3LFTBZ2K • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq Epithelial cell TF Show metadata Download track Track metadata identifier NGENCQ3LFTBZ2K data_source ENCODE Download track Download number_of_intervals 48,156 bp_covered 9,403,081 output_type IDR thresholded peaks genome_build hg38 cell_type Epithelial cell biosample_type Primary cell biosample_term_id CL:0000066 tissue_category Breast encode_experiment_id ENCSR000DUS biological_replicate 1 technical_replicate 1_1 antibody CTCF assay TF ChIP-seq file_format bed narrowPeak file_size 792,483 downloaded_date 06/12/2022 release_date 09/25/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF808CEQ.bed.gz processed_file_md5 04fe2abe77ee97c49807695875beb045 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF808CEQ.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF808CEQ.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF808CEQ/@@download/ENCFF808CEQ.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF808CEQ.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 41305481a5c684dafc876929a5b99efa data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq CTCF IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens mammary epithelial cell female;Lab=John Stamatoyannopoulos, UW;ENCODE_internal_tags=RegulomeDB_1_0,ccre_inputv2,RegulomeDB_2_0,RegulomeDB_2_1,ccre_inputv1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=NR;Reference=PMID:32728046;External_resources=GEO:GSM749753,FactorBook:ENCSR000DUS,SCREEN-GRCh38:mammary_epithelial_cell_female,UCSC-ENCODE-hg19:wgEncodeEH000419;Project=ENCODE;Award=U54HG004592;Experiment_date_released=2012-01-17,2011-03-17;Submitted_track_name=rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=mammary epithelial cell;ENCODE_cell_slims=epithelial cell;ENCODE_system_slims=integumental system,exocrine system;ENCODE_biosample_term_synonyms=breast epithelial cell,mammary epithelial cell;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=CL:0002327;is_hg38_lifted=no system_category Reproductive life_stage Unknown track_name ENCODE Epithelial cell (repl. 1) TF ChIP-seq CTCF IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000DUS] [TF ChIP-seq peaks]
CTCF • SK-N-SH NGENCQ3XOIZXRP • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq SK-N-SH TF Show metadata Download track Track metadata identifier NGENCQ3XOIZXRP data_source ENCODE Download track Download number_of_intervals 52,456 bp_covered 11,247,385 output_type IDR thresholded peaks genome_build hg38 cell_type SK-N-SH biosample_type Cell line biosample_term_id EFO:0003072 tissue_category Brain encode_experiment_id ENCSR000EIC biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CTCF assay TF ChIP-seq file_format bed narrowPeak file_size 993,454 downloaded_date 06/12/2022 release_date 09/25/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF731NJX.bed.gz processed_file_md5 b5c298f046672f964d3592ddb2d08b4e wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF731NJX.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF731NJX.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF731NJX/@@download/ENCFF731NJX.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF731NJX.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 f024443e55d83ece690b59fb050597a7 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq CTCF IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens SK-N-SH;Lab=Michael Snyder, Stanford;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,RegulomeDB_2_1,ccre_inputv1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=child 4 years;Reference=NR;External_resources=GEO:GSM1003633,UCSC-ENCODE-hg19:wgEncodeEH003371,FactorBook:ENCSR000EIC;Project=ENCODE;Award=U54HG004558;Experiment_date_released=2012-08-20;Submitted_track_name=pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=SK-N-SH;ENCODE_cell_slims=neuroblastoma cell,cancer cell;ENCODE_system_slims=central nervous system;ENCODE_biosample_term_synonyms=SKNSH;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0003072;is_hg38_lifted=no system_category Nervous life_stage Child track_name ENCODE SK-N-SH (repl. 1, 2) TF ChIP-seq CTCF IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000EIC] [Life stage: Child] [TF ChIP-seq peaks]
CTCF • Middle frontal area BA46 NGENCQ43QJEXU3 • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq Middle frontal area BA46 TF Show metadata Download track Track metadata identifier NGENCQ43QJEXU3 data_source ENCODE Download track Download number_of_intervals 40,575 bp_covered 14,863,561 output_type IDR thresholded peaks genome_build hg38 cell_type Middle frontal area BA46 biosample_type Tissue biosample_term_id UBERON:0006483 tissue_category Brain encode_experiment_id ENCSR378KET biological_replicate 1 technical_replicate 1_1, 1_2 antibody CTCF assay TF ChIP-seq file_format bed narrowPeak file_size 719,882 downloaded_date 06/12/2022 release_date 09/16/2021 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF041CKA.bed.gz processed_file_md5 02e23c11d25c017c9bf0e6778c4352d9 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF041CKA.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF041CKA.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF041CKA/@@download/ENCFF041CKA.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF041CKA.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 629b973412af5c071f6a0c2e085d8c1f data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq CTCF IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens dorsolateral prefrontal cortex tissue male adult (83 years);Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RushAD,RegulomeDB_2_2,RegulomeDB_2_1;Life_stage_age=adult 83 years;Reference=NR;External_resources=GEO:GSE187363;Project=ENCODE;Award=UM1HG009390;Experiment_date_released=2021-09-21;Submitted_track_name=rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=dorsolateral prefrontal cortex;ENCODE_cell_slims=NR;ENCODE_system_slims=central nervous system;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.8.0 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=UBERON:0006483;is_hg38_lifted=no system_category Nervous life_stage Adult track_name ENCODE Middle frontal area BA46 (repl. 1) TF ChIP-seq CTCF IDR thresholded peaks (narrowPeak) [Experiment: ENCSR378KET] [Life stage: Adult] [TF ChIP-seq peaks]
CTCF • HCT116 NGENCQ6GBHI3TY • ENCODE22955616 | 41168159 | 31713622 ChIA-PET HCT116 Chromatin interactions Show metadata Download track Track metadata identifier NGENCQ6GBHI3TY data_source ENCODE Download track Download number_of_intervals 1,256,892 bp_covered 1,402,176,430 output_type chromatin interactions genome_build hg38 cell_type HCT116 biosample_type Cell line biosample_term_id EFO:0002824 tissue_category Digestive encode_experiment_id ENCSR741AGK biological_replicate 1 technical_replicate 1_1 antibody CTCF assay ChIA-PET file_format bed bed4+19 interact file_size 45,914,117 downloaded_date 09/20/2025 release_date 01/28/2022 date_added_to_filer 10/27/2025 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/loops/ChIA-PET/bed4plus19_interact/hg38/formatted_output_ENCFF006SFW.bed.gz processed_file_md5 b4a59297520de574fbb61d71dc3e25fb wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/loops/ChIA-PET/bed4plus19_interact/hg38/formatted_output_ENCFF006SFW.bed.gz -P FILER2/Annotationtracks/ENCODE/loops/ChIA-PET/bed4plus19_interact/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/loops/ChIA-PET/bed4plus19_interact/hg38/formatted_output_ENCFF006SFW.bed.gz.tbi -P FILER2/Annotationtracks/ENCODE/loops/ChIA-PET/bed4plus19_interact/hg38/ link_out_url https://www.encodeproject.org/ raw_file_url https://www.encodeproject.org/files/ENCFF006SFW/@@download/ENCFF006SFW.bedpe.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/chromatin_interaction/ENCFF006SFW.bedpe.gz -P FILER2/Annotationtracks/Downloads/ENCODE/chromatin_interaction/ raw_file_md5 2b540f0df9ed27dc09153b2c2558ca55 data_category Chromatin interactions Genomic feature type ChIA-PET chromatin interactions track_description version=2024;Biosample_summary=Homo sapiens HCT116 genetically modified (insertion) using CRISPR inserting O. sativa LOC4335696, (insertion) using CRISPR targeting H. sapiens BRD4 treated with 1 _M 5-Phenyl-1H-indole-3-acetic acid for 6 hours;Lab=Charles Lee;ENCODE_internal_tags=Degron;Life_stage_age=adult 48 years;Reference=NR;External_resources=GEO:GSE242653;Project=ENCODE;Award=3UM1HG009409-04S1;Experiment_date_released=2022-02-03;Submitted_track_name=LHH0200.e500.clusters.cis.BE3.gz;ENCODE_preferred_default=false;ENCODE_biosample_term_name=HCT116;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_system_slims=digestive system;ENCODE_biosample_term_synonyms=HCT-116 cell,HCT116 cell;Analysis_title=Lab custom GRCh38;GM=[Method:CRISPR|Category:Insertion];Fragmentation_method=sonication (Branson Sonifier 250);Library_size=300-600;schema=BED4+19;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002824;is_hg38_lifted=no system_category Digestive life_stage Adult track_name ENCODE HCT116 (repl. 1) ChIA-PET CTCF chromatin interactions (bed4+19 interact) [Experiment: ENCSR741AGK] [Life stage: Adult] [Chromatin interactions]
CTCF • GM06990 NGENCQ6XA4DH43 • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq GM06990 TF Show metadata Download track Track metadata identifier NGENCQ6XA4DH43 data_source ENCODE Download track Download number_of_intervals 38,958 bp_covered 9,909,400 output_type IDR thresholded peaks genome_build hg38 cell_type GM06990 biosample_type Cell line biosample_term_id EFO:0002783 tissue_category Blood encode_experiment_id ENCSR000DQW biological_replicate 2 technical_replicate 2_1 antibody CTCF assay TF ChIP-seq file_format bed narrowPeak file_size 735,140 downloaded_date 06/12/2022 release_date 09/26/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF052WDB.bed.gz processed_file_md5 59249eea1648552c69e6ba6118cea796 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF052WDB.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF052WDB.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF052WDB/@@download/ENCFF052WDB.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF052WDB.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 dc5330d049d180959a6ea7944817b2ec data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq CTCF IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens GM06990;Lab=John Stamatoyannopoulos, UW;ENCODE_internal_tags=RegulomeDB_1_0,ccre_inputv2,RegulomeDB_2_0,RegulomeDB_2_1,ccre_inputv1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=NR;Reference=PMID:32728046;External_resources=SCREEN-GRCh38:GM06990,FactorBook:ENCSR000DQW,GEO:GSM749708,UCSC-ENCODE-hg19:wgEncodeEH000392;Project=ENCODE;Award=U54HG004592;Experiment_date_released=2011-03-17;Submitted_track_name=rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=GM06990;ENCODE_cell_slims=hematopoietic cell,leukocyte,B cell;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002783;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name ENCODE GM06990 (repl. 2) TF ChIP-seq CTCF IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000DQW] [TF ChIP-seq peaks]
CTCF • A549 NGENCQ7DRNQXPW • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq A549 TF Show metadata Download track Track metadata identifier NGENCQ7DRNQXPW data_source ENCODE Download track Download number_of_intervals 42,407 bp_covered 16,413,473 output_type IDR thresholded peaks genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR130TQM biological_replicate 1, 2, 3 technical_replicate 1_1, 2_1, 3_1 antibody CTCF assay TF ChIP-seq file_format bed narrowPeak file_size 769,950 downloaded_date 09/10/2024 release_date 10/02/2020 date_added_to_filer 10/01/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF235GTZ.bed.gz processed_file_md5 1eac87ffa07c629f3cefc8e54c508983 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF235GTZ.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF235GTZ.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF235GTZ/@@download/ENCFF235GTZ.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF235GTZ.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 c3211143a3acf9975fb9604055fa493c data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq CTCF IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens A549 treated with 100 nM dexamethasone (agonist) for 4 hours;Lab=Tim Reddy, Duke;ENCODE_internal_tags=RegulomeDB_2_2,RegulomeDB_2_1;Life_stage_age=adult 58 years;Reference=NR;External_resources=FactorBook:ENCSR130TQM,GEO:GSE92786;Project=GGR;Award=U01HG007900;Experiment_date_released=2016-12-20;Submitted_track_name=pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=A549;ENCODE_cell_slims=cancer cell;ENCODE_system_slims=respiratory system;ENCODE_biosample_term_synonyms=A-549,A549 cell;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name ENCODE A549 (repl. 1, 2, 3) TF ChIP-seq CTCF IDR thresholded peaks (narrowPeak) [Experiment: ENCSR130TQM] [Life stage: Adult] [TF ChIP-seq peaks]
CTCF • Keratinocyte NGENCQARAV4TLH • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq Keratinocyte TF Show metadata Download track Track metadata identifier NGENCQARAV4TLH data_source ENCODE Download track Download number_of_intervals 32,052 bp_covered 7,807,122 output_type IDR thresholded peaks genome_build hg38 cell_type Keratinocyte biosample_type Primary cell biosample_term_id CL:0000312 tissue_category Skin encode_experiment_id ENCSR000ALJ biological_replicate 1 technical_replicate 1_1 antibody CTCF assay TF ChIP-seq file_format bed narrowPeak file_size 527,851 downloaded_date 06/12/2022 release_date 09/26/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF987QGG.bed.gz processed_file_md5 4df68be276166b156d4aa3992e15d498 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF987QGG.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF987QGG.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF987QGG/@@download/ENCFF987QGG.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF987QGG.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 fbf7c454943a921243cef836f4c03cea data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq CTCF IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens keratinocyte female;Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=NR;Reference=PMID:32728046;External_resources=UCSC-ENCODE-hg19:wgEncodeEH000063,FactorBook:ENCSR000ALJ,GEO:GSM733636;Project=ENCODE;Award=U54HG004570;Experiment_date_released=2011-02-10;Submitted_track_name=rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=keratinocyte;ENCODE_cell_slims=keratinocyte,epithelial cell;ENCODE_system_slims=integumental system;ENCODE_biosample_term_synonyms=malpighian cell,keratinized cell of epidermis;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=CL:0000312;is_hg38_lifted=no system_category Integumentary life_stage Unknown track_name ENCODE Keratinocyte (repl. 1) TF ChIP-seq CTCF IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000ALJ] [TF ChIP-seq peaks]
CTCF • Spleen NGENCQBPMTDARG • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq Spleen TF Show metadata Download track Track metadata identifier NGENCQBPMTDARG data_source ENCODE Download track Download number_of_intervals 26,106 bp_covered 5,034,826 output_type IDR thresholded peaks genome_build hg38 cell_type Spleen biosample_type Tissue biosample_term_id UBERON:0002106 tissue_category Immune Organ encode_experiment_id ENCSR000DNI biological_replicate 2 technical_replicate 2_1 antibody CTCF assay TF ChIP-seq file_format bed narrowPeak file_size 433,261 downloaded_date 06/12/2022 release_date 08/13/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF352OPT.bed.gz processed_file_md5 442531b930bcaf6bd48b133c33f521d3 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF352OPT.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF352OPT.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF352OPT/@@download/ENCFF352OPT.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF352OPT.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 1d60266fcb43281627916869c1efac2a data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq CTCF IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens spleen tissue female adult (20 years) and female adult (30 years);Lab=Vishwanath Iyer, UTA;ENCODE_internal_tags=RegulomeDB_1_0,ccre_inputv2,RegulomeDB_2_0,RegulomeDB_2_1,ccre_inputv1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=NR;Reference=NR;External_resources=FactorBook:ENCSR000DNI,GEO:GSM1006883,SCREEN-GRCh38:spleen_female_adult_20_years_and_female_adult_30_years,UCSC-ENCODE-hg19:wgEncodeEH003464;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2012-08-27;Submitted_track_name=rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=spleen;ENCODE_cell_slims=NR;ENCODE_system_slims=digestive system,immune system;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=UBERON:0002106;is_hg38_lifted=no system_category Lymphatic life_stage Adult track_name ENCODE Spleen (repl. 2) TF ChIP-seq CTCF IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000DNI] [Life stage: Adult] [TF ChIP-seq peaks]
CTCF • C4-2B NGENCQCDKASEMI • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq C4-2B TF Show metadata Download track Track metadata identifier NGENCQCDKASEMI data_source ENCODE Download track Download number_of_intervals 91,304 bp_covered 80,290,531 output_type conservative IDR thresholded peaks genome_build hg38 cell_type C4-2B biosample_type Cell line biosample_term_id EFO:0006365 tissue_category Male Reproductive encode_experiment_id ENCSR460LGH biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CTCF assay TF ChIP-seq file_format bed narrowPeak file_size 1,517,773 downloaded_date 06/12/2022 release_date 09/01/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF821XVN.bed.gz processed_file_md5 384dd7dadcd8414b537b8ac7b9e95534 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF821XVN.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF821XVN.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF821XVN/@@download/ENCFF821XVN.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF821XVN.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 4d705960f9cd1ac0dd2db723e01aeebf data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq CTCF conservative IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens C4-2B;Lab=Michael Snyder, Stanford;ENCODE_internal_tags=RegulomeDB_1_0,ccre_inputv2,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,RegulomeDB_2_2;Life_stage_age=adult 50 years;Reference=NR;External_resources=GEO:GSE105628,SCREEN-GRCh38:C4-2B,FactorBook:ENCSR460LGH;Project=ENCODE;Award=U54HG006996;Experiment_date_released=2017-07-21,2017-02-02;Submitted_track_name=rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=C4-2B;ENCODE_cell_slims=cancer cell;ENCODE_system_slims=reproductive system;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0006365;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name ENCODE C4-2B (repl. 1, 2) TF ChIP-seq CTCF conservative IDR thresholded peaks (narrowPeak) [Experiment: ENCSR460LGH] [Life stage: Adult] [TF ChIP-seq peaks]
CTCF • DOHH2 NGENCQCVYV4ZWF • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq DOHH2 TF Show metadata Download track Track metadata identifier NGENCQCVYV4ZWF data_source ENCODE Download track Download number_of_intervals 56,025 bp_covered 23,211,964 output_type IDR thresholded peaks genome_build hg38 cell_type DOHH2 biosample_type Cell line biosample_term_id EFO:0002167 tissue_category Blood encode_experiment_id ENCSR084RDK biological_replicate 2 technical_replicate 2_1 antibody CTCF assay TF ChIP-seq file_format bed narrowPeak file_size 1,002,638 downloaded_date 06/12/2022 release_date 10/10/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF640QGP.bed.gz processed_file_md5 d003f52ae26c5052833bf552ac570de3 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF640QGP.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF640QGP.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF640QGP/@@download/ENCFF640QGP.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF640QGP.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 969f5fb14de9c3344f6264b2875e8640 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq CTCF IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens DOHH2;Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_1_0,ccre_inputv2,RegulomeDB_2_0,RegulomeDB_2_1,ccre_inputv1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=adult 60 years;Reference=NR;External_resources=FactorBook:ENCSR084RDK,SCREEN-GRCh38:DOHH2,GEO:GSE101017;Project=ENCODE;Award=U54HG006991;Experiment_date_released=2014-07-11;Submitted_track_name=rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=DOHH2;ENCODE_cell_slims=hematopoietic cell,leukocyte,B cell;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002167;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name ENCODE DOHH2 (repl. 2) TF ChIP-seq CTCF IDR thresholded peaks (narrowPeak) [Experiment: ENCSR084RDK] [Life stage: Adult] [TF ChIP-seq peaks]
CTCF • HEK293 NGENCQESRLMNNW • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq HEK293 TF Show metadata Download track Track metadata identifier NGENCQESRLMNNW data_source ENCODE Download track Download number_of_intervals 33,256 bp_covered 11,810,238 output_type conservative IDR thresholded peaks genome_build hg38 cell_type HEK293 biosample_type Cell line biosample_term_id EFO:0001182 tissue_category Kidney encode_experiment_id ENCSR617IFZ biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CTCF assay TF ChIP-seq file_format bed narrowPeak file_size 666,704 downloaded_date 06/12/2022 release_date 08/07/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF206AQV.bed.gz processed_file_md5 7b2d989bcca57ee7b636f5cefc11f601 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF206AQV.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF206AQV.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF206AQV/@@download/ENCFF206AQV.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF206AQV.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 ccda494b0072ff125908b2d62ab780f5 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq CTCF conservative IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens HEK293 genetically modified (insertion) using site-specific recombination targeting H. sapiens CTCF;Lab=Michael Snyder, Stanford;ENCODE_internal_tags=RegulomeDB_1_0,ccre_inputv2,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,RegulomeDB_2_2;Life_stage_age=NR;Reference=PMID:32728046;External_resources=FactorBook:ENCSR617IFZ,GEO:GSE91917,SCREEN-GRCh38:HEK293_genetically_modified_using_site-specific_recombination_originated_from_HEK293;Project=ENCODE;Award=U54HG006996;Experiment_date_released=2016-10-07;Submitted_track_name=rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=HEK293;ENCODE_cell_slims=epithelial cell;ENCODE_system_slims=excretory system;ENCODE_biosample_term_synonyms=human embryonic kidney cell;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=[Method:site-specific recombination|Category:insertion];schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001182;is_hg38_lifted=no system_category Renal life_stage Embryonic track_name ENCODE HEK293 (repl. 1, 2) TF ChIP-seq CTCF conservative IDR thresholded peaks (narrowPeak) [Experiment: ENCSR617IFZ] [Life stage: Embryonic] [TF ChIP-seq peaks]
CTCF • A549 NGENCQEVEIA2UW • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq A549 TF Show metadata Download track Track metadata identifier NGENCQEVEIA2UW data_source ENCODE Download track Download number_of_intervals 39,446 bp_covered 15,657,817 output_type IDR thresholded peaks genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR851SOK biological_replicate 1 technical_replicate 1_1 antibody CTCF assay TF ChIP-seq file_format bed narrowPeak file_size 679,086 downloaded_date 07/10/2025 release_date 10/01/2020 date_added_to_filer 07/30/2025 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF835JLO.bed.gz processed_file_md5 395323b920e7c01629f94c60b0106b62 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF835JLO.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF835JLO.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF835JLO/@@download/ENCFF835JLO.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF835JLO.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 bf8148493902251a79425996ff86b75a data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq CTCF IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens A549 treated with 100 nM dexamethasone (agonist) for 3 hours;Lab=Tim Reddy, Duke;ENCODE_internal_tags=RegulomeDB_2_2,RegulomeDB_2_1;Life_stage_age=adult 58 years;Reference=NR;External_resources=FactorBook:ENCSR851SOK,GEO:GSE92830;Project=GGR;Award=U01HG007900;Experiment_date_released=2016-12-20;Submitted_track_name=rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=A549;ENCODE_cell_slims=cancer cell;ENCODE_system_slims=respiratory system;ENCODE_biosample_term_synonyms=A-549,A549 cell;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name ENCODE A549 (repl. 1) TF ChIP-seq CTCF IDR thresholded peaks (narrowPeak) [Experiment: ENCSR851SOK] [Life stage: Adult] [TF ChIP-seq peaks]