ATF3 • K562 NGFTBJUUD2NAGM • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBJUUD2NAGM data_source Factorbook Download track Download number_of_intervals 24,032 bp_covered 264,352 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR632DCH biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ATF3 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 266,452 downloaded_date 07/10/2024 release_date 08/24/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF274SLL_GATGAYGYMAY_sorted.bed.gz processed_file_md5 c0f963b13da38511734017ac92f8e782 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF274SLL_GATGAYGYMAY_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF274SLL_GATGAYGYMAY_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF274SLL_GATGAYGYMAY.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF274SLL_GATGAYGYMAY.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 b2aa94b5b6af61e30feb4f4d4011abe5 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562 stably expressing ATF3;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF274SLL;ENCODE_bigBed_id=ENCFF564FSG;PMID=34755879;Motif_sequence=GATGAYGYMAY;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding ATF3 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR632DCH] [Life stage: Adult] [TFBS]
ATF3 • GM12878 NGFTBJVBBBHRTM • Factorbook34755879 Motif finding GM12878 TFBS Show metadata Download track Track metadata identifier NGFTBJVBBBHRTM data_source Factorbook Download track Download number_of_intervals 2,507 bp_covered 27,577 output_type transcription factor binding sites all genome_build hg38 cell_type GM12878 biosample_type Cell line biosample_term_id EFO:0002784 tissue_category Blood encode_experiment_id ENCSR000BJY biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ATF3 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 33,868 downloaded_date 07/10/2024 release_date 07/18/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF882AEU_TGCGCMTGCGC_sorted.bed.gz processed_file_md5 3eae8138487aed1558e44d9bd9c67ac6 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF882AEU_TGCGCMTGCGC_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF882AEU_TGCGCMTGCGC_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF882AEU_TGCGCMTGCGC.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF882AEU_TGCGCMTGCGC.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 71b0c74d5cd6bf891c7922b870415f42 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens GM12878;Original_cell_type=GM12878;Lab=Richard Myers, HAIB;System=immune system;ENCODE_BED_id=ENCFF882AEU;ENCODE_bigBed_id=ENCFF358BXK;PMID=34755879;Motif_sequence=TGCGCMTGCGC;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002784;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name Factorbook GM12878 (repl. 1, 2) Motif finding ATF3 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BJY] [TFBS]
ATF3 • K562 NGFTBKTIJF3YNM • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBKTIJF3YNM data_source Factorbook Download track Download number_of_intervals 31,151 bp_covered 436,114 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR028UIU biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ATF3 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 433,651 downloaded_date 07/10/2024 release_date 07/08/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF556SMM_NNKRTKRCRTCATC_sorted.bed.gz processed_file_md5 366cd6d733dcf889ad1b9c53c05dfe13 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF556SMM_NNKRTKRCRTCATC_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF556SMM_NNKRTKRCRTCATC_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF556SMM_NNKRTKRCRTCATC.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF556SMM_NNKRTKRCRTCATC.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 e1d7a9e521bccc9e4fb69482d8e5b918 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF556SMM;ENCODE_bigBed_id=ENCFF604FPV;PMID=34755879;Motif_sequence=NNKRTKRCRTCATC;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding ATF3 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR028UIU] [Life stage: Adult] [TFBS]
ATF3 • HepG2 NGFTBM6F4WVGNY • Factorbook34755879 Motif finding HepG2 TFBS Show metadata Download track Track metadata identifier NGFTBM6F4WVGNY data_source Factorbook Download track Download number_of_intervals 1,335 bp_covered 26,700 output_type transcription factor binding sites all genome_build hg38 cell_type HepG2 biosample_type Cell line biosample_term_id EFO:0001187 tissue_category Liver encode_experiment_id ENCSR000BKE biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ATF3 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 26,839 downloaded_date 07/10/2024 release_date 07/18/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF440JOS_CGGCGCBSVSHGATGACGYM_sorted.bed.gz processed_file_md5 21ad0833edc92e630942470bdc045cd2 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF440JOS_CGGCGCBSVSHGATGACGYM_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF440JOS_CGGCGCBSVSHGATGACGYM_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF440JOS_CGGCGCBSVSHGATGACGYM.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF440JOS_CGGCGCBSVSHGATGACGYM.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 e88886b81e9876b4f5acb661f0f5d888 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens HepG2;Original_cell_type=HepG2;Lab=Richard Myers, HAIB;System=exocrine system,endocrine system,digestive system;ENCODE_BED_id=ENCFF440JOS;ENCODE_bigBed_id=ENCFF928LDD;PMID=34755879;Motif_sequence=CGGCGCBSVSHGATGACGYM;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001187;is_hg38_lifted=no system_category Digestive life_stage Child track_name Factorbook HepG2 (repl. 1, 2) Motif finding ATF3 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BKE] [Life stage: Child] [TFBS]
ATF3 • HCT116 NGFTBM7GOPXP7J • Factorbook34755879 Motif finding HCT116 TFBS Show metadata Download track Track metadata identifier NGFTBM7GOPXP7J data_source Factorbook Download track Download number_of_intervals 461 bp_covered 6,915 output_type transcription factor binding sites all genome_build hg38 cell_type HCT116 biosample_type Cell line biosample_term_id EFO:0002824 tissue_category Digestive encode_experiment_id ENCSR000BUG biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ATF3 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 7,465 downloaded_date 07/10/2024 release_date 09/10/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF868BGR_SYGGGTTCGAWTCCC_sorted.bed.gz processed_file_md5 9f03723e81d4468054db050cc2fe298e wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF868BGR_SYGGGTTCGAWTCCC_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF868BGR_SYGGGTTCGAWTCCC_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF868BGR_SYGGGTTCGAWTCCC.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF868BGR_SYGGGTTCGAWTCCC.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 ab8511889f7331a5b7bd7bd8fe287f53 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens HCT116;Original_cell_type=HCT116;Lab=Richard Myers, HAIB;System=digestive system;ENCODE_BED_id=ENCFF868BGR;ENCODE_bigBed_id=ENCFF088WVX;PMID=34755879;Motif_sequence=SYGGGTTCGAWTCCC;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002824;is_hg38_lifted=no system_category Digestive life_stage Adult track_name Factorbook HCT116 (repl. 1, 2) Motif finding ATF3 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BUG] [Life stage: Adult] [TFBS]
ATF3 • HCT116 NGFTBN3ZL7ZFRV • Factorbook34755879 Motif finding HCT116 TFBS Show metadata Download track Track metadata identifier NGFTBN3ZL7ZFRV data_source Factorbook Download track Download number_of_intervals 467 bp_covered 8,873 output_type transcription factor binding sites all genome_build hg38 cell_type HCT116 biosample_type Cell line biosample_term_id EFO:0002824 tissue_category Digestive encode_experiment_id ENCSR000BUG biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ATF3 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 8,446 downloaded_date 07/10/2024 release_date 09/10/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF868BGR_RKGGKTAGVGCGYYBGMCT_sorted.bed.gz processed_file_md5 eddac44dbf6f68777365dd4569bd6acb wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF868BGR_RKGGKTAGVGCGYYBGMCT_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF868BGR_RKGGKTAGVGCGYYBGMCT_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF868BGR_RKGGKTAGVGCGYYBGMCT.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF868BGR_RKGGKTAGVGCGYYBGMCT.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 44559421b773042a2c24ea3abe864283 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens HCT116;Original_cell_type=HCT116;Lab=Richard Myers, HAIB;System=digestive system;ENCODE_BED_id=ENCFF868BGR;ENCODE_bigBed_id=ENCFF088WVX;PMID=34755879;Motif_sequence=RKGGKTAGVGCGYYBGMCT;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002824;is_hg38_lifted=no system_category Digestive life_stage Adult track_name Factorbook HCT116 (repl. 1, 2) Motif finding ATF3 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BUG] [Life stage: Adult] [TFBS]
ATF3 • H1-hESC NGFTBNFAAUAWQU • Factorbook34755879 Motif finding H1-hESC TFBS Show metadata Download track Track metadata identifier NGFTBNFAAUAWQU data_source Factorbook Download track Download number_of_intervals 5,784 bp_covered 55,554 output_type transcription factor binding sites all genome_build hg38 cell_type H1-hESC biosample_type Cell line biosample_term_id EFO:0003042 tissue_category Embryo encode_experiment_id ENCSR000BKC biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ATF3 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 66,689 downloaded_date 07/10/2024 release_date 07/18/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF440FTA_GTCACGTG_sorted.bed.gz processed_file_md5 abdc45ec5805c65a5f556af08a75b877 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF440FTA_GTCACGTG_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF440FTA_GTCACGTG_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF440FTA_GTCACGTG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF440FTA_GTCACGTG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 48103c3441fe4a49c99122b78fb141e1 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens H1;Original_cell_type=H1;Lab=Richard Myers, HAIB;System=NR;ENCODE_BED_id=ENCFF440FTA;ENCODE_bigBed_id=ENCFF852GZY;PMID=34755879;Motif_sequence=GTCACGTG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0003042;is_hg38_lifted=no system_category Embryo life_stage Unknown track_name Factorbook H1-hESC (repl. 1, 2) Motif finding ATF3 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BKC] [TFBS]
ATF3 • GM12878 NGFTBNVPNR3EV2 • Factorbook34755879 Motif finding GM12878 TFBS Show metadata Download track Track metadata identifier NGFTBNVPNR3EV2 data_source Factorbook Download track Download number_of_intervals 217 bp_covered 3,255 output_type transcription factor binding sites significant genome_build hg38 cell_type GM12878 biosample_type Cell line biosample_term_id EFO:0002784 tissue_category Blood encode_experiment_id ENCSR000BJY biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ATF3 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 2,710 downloaded_date 07/10/2024 release_date 07/18/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF882AEU_KCTGGGAAWTGTAGT_filtered.bed.gz processed_file_md5 4d01effe3aaa72645eab0ea2ff57b035 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF882AEU_KCTGGGAAWTGTAGT_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF882AEU_KCTGGGAAWTGTAGT_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF882AEU_KCTGGGAAWTGTAGT.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF882AEU_KCTGGGAAWTGTAGT.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 e79bd57ffb6f5f5d6ae8cf9980dcbcf3 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens GM12878;Original_cell_type=GM12878;Lab=Richard Myers, HAIB;System=immune system;ENCODE_BED_id=ENCFF882AEU;ENCODE_bigBed_id=ENCFF358BXK;PMID=34755879;Motif_sequence=KCTGGGAAWTGTAGT;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002784;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name Factorbook GM12878 (repl. 1, 2) Motif finding ATF3 transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR000BJY] [TFBS]
ATF3 • HepG2 NGFTBO4NIA6QSW • Factorbook34755879 Motif finding HepG2 TFBS Show metadata Download track Track metadata identifier NGFTBO4NIA6QSW data_source Factorbook Download track Download number_of_intervals 402 bp_covered 11,256 output_type transcription factor binding sites significant genome_build hg38 cell_type HepG2 biosample_type Cell line biosample_term_id EFO:0001187 tissue_category Liver encode_experiment_id ENCSR000BKE biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ATF3 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 9,017 downloaded_date 07/10/2024 release_date 07/18/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF440JOS_CGCRRGGSMYKCTGGGARWTGTAGTYCY_filtered.bed.gz processed_file_md5 8b157e281e911311118712d42dcc8215 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF440JOS_CGCRRGGSMYKCTGGGARWTGTAGTYCY_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF440JOS_CGCRRGGSMYKCTGGGARWTGTAGTYCY_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF440JOS_CGCRRGGSMYKCTGGGARWTGTAGTYCY.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF440JOS_CGCRRGGSMYKCTGGGARWTGTAGTYCY.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 7a80d161f9511b6a6e5a6b2063473f65 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens HepG2;Original_cell_type=HepG2;Lab=Richard Myers, HAIB;System=exocrine system,endocrine system,digestive system;ENCODE_BED_id=ENCFF440JOS;ENCODE_bigBed_id=ENCFF928LDD;PMID=34755879;Motif_sequence=CGCRRGGSMYKCTGGGARWTGTAGTYCY;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001187;is_hg38_lifted=no system_category Digestive life_stage Child track_name Factorbook HepG2 (repl. 1, 2) Motif finding ATF3 transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR000BKE] [Life stage: Child] [TFBS]
ATF3 • K562 NGFTBP2YOG75KM • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBP2YOG75KM data_source Factorbook Download track Download number_of_intervals 4,833 bp_covered 135,324 output_type transcription factor binding sites significant genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR632DCH biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ATF3 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 76,773 downloaded_date 07/10/2024 release_date 08/24/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF274SLL_TCTCRCTCTGTYDCCCAGGCTGGAGTGC_filtered.bed.gz processed_file_md5 01c40e0df66fea86fc60cdb3599437c2 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF274SLL_TCTCRCTCTGTYDCCCAGGCTGGAGTGC_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF274SLL_TCTCRCTCTGTYDCCCAGGCTGGAGTGC_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF274SLL_TCTCRCTCTGTYDCCCAGGCTGGAGTGC.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF274SLL_TCTCRCTCTGTYDCCCAGGCTGGAGTGC.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 b42c5c6b874229d6a65dc1e4ad4498dd data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562 stably expressing ATF3;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF274SLL;ENCODE_bigBed_id=ENCFF564FSG;PMID=34755879;Motif_sequence=TCTCRCTCTGTYDCCCAGGCTGGAGTGC;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding ATF3 transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR632DCH] [Life stage: Adult] [TFBS]
ATF3 • K562 NGFTBPJJEZVFAW • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBPJJEZVFAW data_source Factorbook Download track Download number_of_intervals 134 bp_covered 2,814 output_type transcription factor binding sites significant genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR000BNU biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ATF3 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 2,010 downloaded_date 07/10/2024 release_date 07/18/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF718VHT_YGGGATTCGAACCCRSGACCY_filtered.bed.gz processed_file_md5 cce940b10634d48e3e090a414183e632 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF718VHT_YGGGATTCGAACCCRSGACCY_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF718VHT_YGGGATTCGAACCCRSGACCY_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF718VHT_YGGGATTCGAACCCRSGACCY.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF718VHT_YGGGATTCGAACCCRSGACCY.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 ffa2b92c47dfb71c3e30380eb5e4495d data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Richard Myers, HAIB;System=immune system;ENCODE_BED_id=ENCFF718VHT;ENCODE_bigBed_id=ENCFF965VXT;PMID=34755879;Motif_sequence=YGGGATTCGAACCCRSGACCY;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding ATF3 transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR000BNU] [Life stage: Adult] [TFBS]
ATF3 • K562 NGFTBQFLYJJ43R • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBQFLYJJ43R data_source Factorbook Download track Download number_of_intervals 1,583 bp_covered 31,660 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR000DOG biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ATF3 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 30,267 downloaded_date 07/10/2024 release_date 10/29/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF895RNS_GGCGCSSSSBGRTSACGTSA_sorted.bed.gz processed_file_md5 9afe01831b82dd6ce1274b20c367bd60 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF895RNS_GGCGCSSSSBGRTSACGTSA_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF895RNS_GGCGCSSSSBGRTSACGTSA_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF895RNS_GGCGCSSSSBGRTSACGTSA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF895RNS_GGCGCSSSSBGRTSACGTSA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 3d565da2c5ea36ba31b58cbbdb60e6fd data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Kevin Struhl, HMS;System=immune system;ENCODE_BED_id=ENCFF895RNS;ENCODE_bigBed_id=ENCFF611FFO;PMID=34755879;Motif_sequence=GGCGCSSSSBGRTSACGTSA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding ATF3 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000DOG] [Life stage: Adult] [TFBS]
ATF3 • Liver NGFTBQLCBB34SE • Factorbook34755879 Motif finding Liver TFBS Show metadata Download track Track metadata identifier NGFTBQLCBB34SE data_source Factorbook Download track Download number_of_intervals 68 bp_covered 1,972 output_type transcription factor binding sites significant genome_build hg38 cell_type Liver biosample_type Tissue biosample_term_id UBERON:0002107 tissue_category Liver encode_experiment_id ENCSR205FOW biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ATF3 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 1,190 downloaded_date 07/10/2024 release_date 03/31/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF425EIC_GACCTYYNGMTTVDDAGKCNRRCGCBCTA_filtered.bed.gz processed_file_md5 3797167155a40cda86ad7b2f7d5b2cd2 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF425EIC_GACCTYYNGMTTVDDAGKCNRRCGCBCTA_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF425EIC_GACCTYYNGMTTVDDAGKCNRRCGCBCTA_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF425EIC_GACCTYYNGMTTVDDAGKCNRRCGCBCTA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF425EIC_GACCTYYNGMTTVDDAGKCNRRCGCBCTA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 d5fd448f6f0e5d3f532e69ce66c63f17 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens liver tissue female child (4 years);Original_cell_type=liver;Lab=Richard Myers, HAIB;System=exocrine system,endocrine system,digestive system;ENCODE_BED_id=ENCFF425EIC;ENCODE_bigBed_id=ENCFF867MFZ;PMID=34755879;Motif_sequence=GACCTYYNGMTTVDDAGKCNRRCGCBCTA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=UBERON:0002107;is_hg38_lifted=no system_category Digestive life_stage Child track_name Factorbook Liver (repl. 1, 2) Motif finding ATF3 transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR205FOW] [Life stage: Child] [TFBS]
ATF3 • K562 NGFTBQRWVPX3VL • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBQRWVPX3VL data_source Factorbook Download track Download number_of_intervals 23,012 bp_covered 184,096 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR632DCH biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ATF3 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 180,997 downloaded_date 07/10/2024 release_date 08/24/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF274SLL_VTGACTCA_sorted.bed.gz processed_file_md5 88f09b0c536f2c84309b24171287cffa wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF274SLL_VTGACTCA_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF274SLL_VTGACTCA_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF274SLL_VTGACTCA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF274SLL_VTGACTCA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 32dd3e992fdc5a70f9549677dcce23e3 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562 stably expressing ATF3;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF274SLL;ENCODE_bigBed_id=ENCFF564FSG;PMID=34755879;Motif_sequence=VTGACTCA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding ATF3 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR632DCH] [Life stage: Adult] [TFBS]
ATF3 • A549 NGFTBRJG6GUSTQ • Factorbook34755879 Motif finding A549 TFBS Show metadata Download track Track metadata identifier NGFTBRJG6GUSTQ data_source Factorbook Download track Download number_of_intervals 1,370 bp_covered 30,140 output_type transcription factor binding sites all genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR000BPS biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ATF3 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 25,770 downloaded_date 07/10/2024 release_date 02/29/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF946JXX_TTDNNAGKCVRRCGCBCTAMCC_sorted.bed.gz processed_file_md5 fe98afe1e56052baa0f1bcbb5afc8a4d wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF946JXX_TTDNNAGKCVRRCGCBCTAMCC_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF946JXX_TTDNNAGKCVRRCGCBCTAMCC_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF946JXX_TTDNNAGKCVRRCGCBCTAMCC.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF946JXX_TTDNNAGKCVRRCGCBCTAMCC.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 bdca12656d00e464dbeae692a0d1f62b data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens A549 treated with 0.02% ethanol for 1 hour;Original_cell_type=A549;Lab=Richard Myers, HAIB;System=respiratory system;ENCODE_BED_id=ENCFF946JXX;ENCODE_bigBed_id=ENCFF835RMG;PMID=34755879;Motif_sequence=TTDNNAGKCVRRCGCBCTAMCC;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name Factorbook A549 (repl. 1, 2) Motif finding ATF3 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BPS] [Life stage: Adult] [TFBS]
ATF3 • K562 NGFTBSKHXE22CG • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBSKHXE22CG data_source Factorbook Download track Download number_of_intervals 5,532 bp_covered 60,852 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR000BNU biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ATF3 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 77,416 downloaded_date 07/10/2024 release_date 07/18/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF718VHT_GGTCACGTGRS_sorted.bed.gz processed_file_md5 ed31a8c1b9ccd0327d4c8f2da3bcdb47 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF718VHT_GGTCACGTGRS_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF718VHT_GGTCACGTGRS_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF718VHT_GGTCACGTGRS.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF718VHT_GGTCACGTGRS.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 9037c7b526aa959691a51802f0270b7c data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Richard Myers, HAIB;System=immune system;ENCODE_BED_id=ENCFF718VHT;ENCODE_bigBed_id=ENCFF965VXT;PMID=34755879;Motif_sequence=GGTCACGTGRS;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding ATF3 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BNU] [Life stage: Adult] [TFBS]
ATF3 • K562 NGFTBSOTZNWA7B • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBSOTZNWA7B data_source Factorbook Download track Download number_of_intervals 6,990 bp_covered 76,890 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR000BNU biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ATF3 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 95,219 downloaded_date 07/10/2024 release_date 07/18/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF718VHT_VDTGMGTCAYC_sorted.bed.gz processed_file_md5 d0add29dd310c74e04defc7c520b9cdb wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF718VHT_VDTGMGTCAYC_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF718VHT_VDTGMGTCAYC_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF718VHT_VDTGMGTCAYC.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF718VHT_VDTGMGTCAYC.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 62f6bc42c942417940f7edbe312908bd data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Richard Myers, HAIB;System=immune system;ENCODE_BED_id=ENCFF718VHT;ENCODE_bigBed_id=ENCFF965VXT;PMID=34755879;Motif_sequence=VDTGMGTCAYC;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding ATF3 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BNU] [Life stage: Adult] [TFBS]
ATF3 • Liver NGFTBUG66G2UGU • Factorbook34755879 Motif finding Liver TFBS Show metadata Download track Track metadata identifier NGFTBUG66G2UGU data_source Factorbook Download track Download number_of_intervals 7,034 bp_covered 77,374 output_type transcription factor binding sites all genome_build hg38 cell_type Liver biosample_type Tissue biosample_term_id UBERON:0002107 tissue_category Liver encode_experiment_id ENCSR480LIS biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ATF3 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 95,739 downloaded_date 07/10/2024 release_date 03/31/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF722BFP_RTGATGWMAYH_sorted.bed.gz processed_file_md5 a0bdb71c9ed555aaae6e9fc5edb18c89 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF722BFP_RTGATGWMAYH_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF722BFP_RTGATGWMAYH_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF722BFP_RTGATGWMAYH.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF722BFP_RTGATGWMAYH.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 742d76ac35cceb34e6951c0989bf4df4 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens with nonobstructive coronary artery disease| liver tissue male adult (32 years);Original_cell_type=liver;Lab=Richard Myers, HAIB;System=exocrine system,endocrine system,digestive system;ENCODE_BED_id=ENCFF722BFP;ENCODE_bigBed_id=ENCFF375GID;PMID=34755879;Motif_sequence=RTGATGWMAYH;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=UBERON:0002107;is_hg38_lifted=no system_category Digestive life_stage Adult track_name Factorbook Liver (repl. 1, 2) Motif finding ATF3 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR480LIS] [Life stage: Adult] [TFBS]
ATF3 • GM12878 NGFTBUPOTOVUAN • Factorbook34755879 Motif finding GM12878 TFBS Show metadata Download track Track metadata identifier NGFTBUPOTOVUAN data_source Factorbook Download track Download number_of_intervals 1,073 bp_covered 22,533 output_type transcription factor binding sites all genome_build hg38 cell_type GM12878 biosample_type Cell line biosample_term_id EFO:0002784 tissue_category Blood encode_experiment_id ENCSR000BJY biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ATF3 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 22,198 downloaded_date 07/10/2024 release_date 07/18/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF882AEU_TKRCGTCATCASBSNGCGCCG_sorted.bed.gz processed_file_md5 93ea3ee14bdb16264bbfd998de4a91a0 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF882AEU_TKRCGTCATCASBSNGCGCCG_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF882AEU_TKRCGTCATCASBSNGCGCCG_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF882AEU_TKRCGTCATCASBSNGCGCCG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF882AEU_TKRCGTCATCASBSNGCGCCG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 f93728f66959abfb42c108928ff2ecda data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens GM12878;Original_cell_type=GM12878;Lab=Richard Myers, HAIB;System=immune system;ENCODE_BED_id=ENCFF882AEU;ENCODE_bigBed_id=ENCFF358BXK;PMID=34755879;Motif_sequence=TKRCGTCATCASBSNGCGCCG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002784;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name Factorbook GM12878 (repl. 1, 2) Motif finding ATF3 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BJY] [TFBS]
ATF3 • HCT116 NGFTBUZZDDQ24T • Factorbook34755879 Motif finding HCT116 TFBS Show metadata Download track Track metadata identifier NGFTBUZZDDQ24T data_source Factorbook Download track Download number_of_intervals 4,183 bp_covered 46,013 output_type transcription factor binding sites all genome_build hg38 cell_type HCT116 biosample_type Cell line biosample_term_id EFO:0002824 tissue_category Digestive encode_experiment_id ENCSR000BUG biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ATF3 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 54,272 downloaded_date 07/10/2024 release_date 09/10/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF868BGR_DRRTGASTCAT_sorted.bed.gz processed_file_md5 5499f91d59bcfcc4ed62a68350fc7bd9 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF868BGR_DRRTGASTCAT_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF868BGR_DRRTGASTCAT_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF868BGR_DRRTGASTCAT.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF868BGR_DRRTGASTCAT.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 bfa03d786488b5bde422c522c8fd16b1 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens HCT116;Original_cell_type=HCT116;Lab=Richard Myers, HAIB;System=digestive system;ENCODE_BED_id=ENCFF868BGR;ENCODE_bigBed_id=ENCFF088WVX;PMID=34755879;Motif_sequence=DRRTGASTCAT;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002824;is_hg38_lifted=no system_category Digestive life_stage Adult track_name Factorbook HCT116 (repl. 1, 2) Motif finding ATF3 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BUG] [Life stage: Adult] [TFBS]