CTCF • GM13977 NGENCXHWH3UFLN • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq GM13977 TF Show metadata Download track Track metadata identifier NGENCXHWH3UFLN data_source ENCODE Download track Download number_of_intervals 31,532 bp_covered 4,516,156 output_type IDR thresholded peaks genome_build hg38 cell_type GM13977 biosample_type Cell line biosample_term_id EFO:0005346 tissue_category Blood encode_experiment_id ENCSR000DLB biological_replicate 1 technical_replicate 1_1 antibody CTCF assay TF ChIP-seq file_format bed narrowPeak file_size 519,295 downloaded_date 06/12/2022 release_date 09/26/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF148III.bed.gz processed_file_md5 1613e1ff12d3c572b6eb5621741ba02d wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF148III.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF148III.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF148III/@@download/ENCFF148III.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF148III.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 4d8abe0a0096dcaa1e353591c895a2ba data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq CTCF IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens GM13977;Lab=Vishwanath Iyer, UTA;ENCODE_internal_tags=RegulomeDB_1_0,ccre_inputv2,RegulomeDB_2_0,RegulomeDB_2_1,ccre_inputv1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=unknown 20 years;Reference=NR;External_resources=FactorBook:ENCSR000DLB,GEO:GSM1006869,SCREEN-GRCh38:GM13977,UCSC-ENCODE-hg19:wgEncodeEH003456;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2012-08-27;Submitted_track_name=rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=GM13977;ENCODE_cell_slims=hematopoietic cell,leukocyte,B cell;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0005346;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name ENCODE GM13977 (repl. 1) TF ChIP-seq CTCF IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000DLB] [TF ChIP-seq peaks]
CTCF • Spleen NGENCXIL2MI7LZ • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq Spleen TF Show metadata Download track Track metadata identifier NGENCXIL2MI7LZ data_source ENCODE Download track Download number_of_intervals 31,729 bp_covered 12,234,410 output_type IDR thresholded peaks genome_build hg38 cell_type Spleen biosample_type Tissue biosample_term_id UBERON:0002106 tissue_category Immune Organ encode_experiment_id ENCSR595BPR biological_replicate 2 technical_replicate 2_1, 2_2 antibody CTCF assay TF ChIP-seq file_format bed narrowPeak file_size 558,885 downloaded_date 06/12/2022 release_date 09/23/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF480HYZ.bed.gz processed_file_md5 c2a2d43fe3f10b8d46eb0a91ff93177f wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF480HYZ.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF480HYZ.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF480HYZ/@@download/ENCFF480HYZ.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF480HYZ.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 ce1566e6333f0bfc696684f1189191ab data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq CTCF IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens spleen tissue female adult (51 years);Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_2_2,ENTEx,RegulomeDB_2_1;Life_stage_age=adult 51 years;Reference=NR;External_resources=GEO:GSE143021,FactorBook:ENCSR595BPR;Project=ENCODE;Award=UM1HG009390;Experiment_date_released=2019-09-11,2019-02-11;Submitted_track_name=rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=spleen;ENCODE_cell_slims=NR;ENCODE_system_slims=digestive system,immune system;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=UBERON:0002106;is_hg38_lifted=no system_category Lymphatic life_stage Adult track_name ENCODE Spleen (repl. 2) TF ChIP-seq CTCF IDR thresholded peaks (narrowPeak) [Experiment: ENCSR595BPR] [Life stage: Adult] [TF ChIP-seq peaks]
CTCF • Tibial nerve NGENCXIW5I56CW • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq Tibial nerve TF Show metadata Download track Track metadata identifier NGENCXIW5I56CW data_source ENCODE Download track Download number_of_intervals 36,259 bp_covered 14,186,304 output_type IDR thresholded peaks genome_build hg38 cell_type Tibial nerve biosample_type Tissue biosample_term_id UBERON:0001323 tissue_category Nervous encode_experiment_id ENCSR434XLP biological_replicate 2 technical_replicate 2_1 antibody CTCF assay TF ChIP-seq file_format bed narrowPeak file_size 716,970 downloaded_date 06/12/2022 release_date 09/01/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF857SLT.bed.gz processed_file_md5 391137da41c744b7cdafa3e7cdbf67eb wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF857SLT.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF857SLT.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF857SLT/@@download/ENCFF857SLT.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF857SLT.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 7ee3f30f83b8c4d0b97c02595cc77035 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq CTCF IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens tibial nerve tissue male adult (37 years);Lab=Michael Snyder, Stanford;ENCODE_internal_tags=ccre_inputv2,ENTEx,ENCYCLOPEDIAv2,RegulomeDB_2_1,RegulomeDB_2_2;Life_stage_age=adult 37 years;Reference=NR;External_resources=SCREEN-GRCh38:tibial_nerve_male_adult_37_years,GEO:GSE105554,FactorBook:ENCSR434XLP;Project=ENCODE;Award=U54HG006996;Experiment_date_released=2016-12-13;Submitted_track_name=rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=tibial nerve;ENCODE_cell_slims=NR;ENCODE_system_slims=peripheral nervous system;ENCODE_biosample_term_synonyms=medial popliteal nerve;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=UBERON:0001323;is_hg38_lifted=no system_category Nervous life_stage Adult track_name ENCODE Tibial nerve (repl. 2) TF ChIP-seq CTCF IDR thresholded peaks (narrowPeak) [Experiment: ENCSR434XLP] [Life stage: Adult] [TF ChIP-seq peaks]
CTCF • WI38 NGENCXK4PBRPEJ • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq WI38 TF Show metadata Download track Track metadata identifier NGENCXK4PBRPEJ data_source ENCODE Download track Download number_of_intervals 31,456 bp_covered 9,147,747 output_type IDR thresholded peaks genome_build hg38 cell_type WI38 biosample_type Cell line biosample_term_id EFO:0001260 tissue_category Lung encode_experiment_id ENCSR000DYB biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CTCF assay TF ChIP-seq file_format bed narrowPeak file_size 524,722 downloaded_date 06/12/2022 release_date 09/25/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF841AXJ.bed.gz processed_file_md5 4c008926fd049d9e808fdf1b2b3b9718 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF841AXJ.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF841AXJ.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF841AXJ/@@download/ENCFF841AXJ.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF841AXJ.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 b998ece1802e2147dea632933be5a924 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq CTCF IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens WI38;Lab=John Stamatoyannopoulos, UW;ENCODE_internal_tags=RegulomeDB_1_0,ccre_inputv2,RegulomeDB_2_0,RegulomeDB_2_1,ccre_inputv1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=NR;Reference=PMID:32728046;External_resources=GEO:GSM1022637,FactorBook:ENCSR000DYB,UCSC-ENCODE-hg19:wgEncodeEH001902,SCREEN-GRCh38:WI38;Project=ENCODE;Award=U54HG004592;Experiment_date_released=2012-01-17;Submitted_track_name=pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=WI38;ENCODE_cell_slims=connective tissue cell,fibroblast;ENCODE_system_slims=respiratory system;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001260;is_hg38_lifted=no system_category Respiratory life_stage Unknown track_name ENCODE WI38 (repl. 1, 2) TF ChIP-seq CTCF IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000DYB] [TF ChIP-seq peaks]
CTCF • HepG2 NGENCXK5EX3R4G • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq HepG2 TF Show metadata Download track Track metadata identifier NGENCXK5EX3R4G data_source ENCODE Download track Download number_of_intervals 53,100 bp_covered 10,995,179 output_type IDR thresholded peaks genome_build hg38 cell_type HepG2 biosample_type Cell line biosample_term_id EFO:0001187 tissue_category Liver encode_experiment_id ENCSR000DUG biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CTCF assay TF ChIP-seq file_format bed narrowPeak file_size 868,634 downloaded_date 06/12/2022 release_date 09/25/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF127KUP.bed.gz processed_file_md5 b7303f519958570e058e6b8562245021 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF127KUP.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF127KUP.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF127KUP/@@download/ENCFF127KUP.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF127KUP.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 1b2618654c036313c9ddfe81caf2c562 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq CTCF IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens HepG2;Lab=John Stamatoyannopoulos, UW;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=child 15 years;Reference=PMID:32728046;External_resources=FactorBook:ENCSR000DUG,UCSC-ENCODE-hg19:wgEncodeEH000401,GEO:GSM749715;Project=ENCODE;Award=U54HG004592;Experiment_date_released=2011-03-17,2011-02-11;Submitted_track_name=pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=HepG2;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_system_slims=exocrine system,endocrine system,digestive system;ENCODE_biosample_term_synonyms=Hep-G2,HepG2 cell;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001187;is_hg38_lifted=no system_category Digestive life_stage Child track_name ENCODE HepG2 (repl. 1, 2) TF ChIP-seq CTCF IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000DUG] [Life stage: Child] [TF ChIP-seq peaks]
CTCF • Epithelial cell NGENCXKL3A4NGH • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq Epithelial cell TF Show metadata Download track Track metadata identifier NGENCXKL3A4NGH data_source ENCODE Download track Download number_of_intervals 89,232 bp_covered 57,908,171 output_type IDR thresholded peaks genome_build hg38 cell_type Epithelial cell biosample_type Primary cell biosample_term_id CL:0000066 tissue_category Male Reproductive encode_experiment_id ENCSR196HOM biological_replicate 1 technical_replicate 1_1 antibody CTCF assay TF ChIP-seq file_format bed narrowPeak file_size 1,412,708 downloaded_date 06/12/2022 release_date 09/01/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF484JLJ.bed.gz processed_file_md5 e82618997bd58303beda50f27d3391ca wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF484JLJ.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF484JLJ.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF484JLJ/@@download/ENCFF484JLJ.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF484JLJ.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 352dbce63128b97808d519ee416858d0 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq CTCF IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens epithelial cell of prostate male;Lab=Michael Snyder, Stanford;ENCODE_internal_tags=RegulomeDB_1_0,ccre_inputv2,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,RegulomeDB_2_2;Life_stage_age=NR;Reference=NR;External_resources=GEO:GSE105383,FactorBook:ENCSR196HOM,SCREEN-GRCh38:epithelial_cell_of_prostate_male;Project=ENCODE;Award=U54HG006996;Experiment_date_released=2017-06-23,2017-01-31;Submitted_track_name=rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=epithelial cell of prostate;ENCODE_cell_slims=epithelial cell;ENCODE_system_slims=reproductive system;ENCODE_biosample_term_synonyms=prostate epithelial cell;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=CL:0002231;is_hg38_lifted=no system_category Reproductive life_stage Unknown track_name ENCODE Epithelial cell (repl. 1) TF ChIP-seq CTCF IDR thresholded peaks (narrowPeak) [Experiment: ENCSR196HOM] [TF ChIP-seq peaks]
CTCF • Middle frontal area BA46 NGENCXKTPFCWK4 • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq Middle frontal area BA46 TF Show metadata Download track Track metadata identifier NGENCXKTPFCWK4 data_source ENCODE Download track Download number_of_intervals 38,575 bp_covered 13,292,448 output_type IDR thresholded peaks genome_build hg38 cell_type Middle frontal area BA46 biosample_type Tissue biosample_term_id UBERON:0006483 tissue_category Brain encode_experiment_id ENCSR575WYM biological_replicate 1 technical_replicate 1_1, 1_2 antibody CTCF assay TF ChIP-seq file_format bed narrowPeak file_size 675,124 downloaded_date 06/12/2022 release_date 06/23/2021 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF478RRB.bed.gz processed_file_md5 25e3cef5ca831059443be9c0441bddd6 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF478RRB.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF478RRB.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF478RRB/@@download/ENCFF478RRB.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF478RRB.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 b35e1d8a3e587ef3b8384865cc6906df data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq CTCF IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens dorsolateral prefrontal cortex tissue female adult (87 years);Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RushAD,RegulomeDB_2_2,RegulomeDB_2_1;Life_stage_age=adult 87 years;Reference=NR;External_resources=GEO:GSE187824;Project=ENCODE;Award=UM1HG009390;Experiment_date_released=2021-07-23,2021-06-21;Submitted_track_name=rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=dorsolateral prefrontal cortex;ENCODE_cell_slims=NR;ENCODE_system_slims=central nervous system;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.8.0 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=UBERON:0006483;is_hg38_lifted=no system_category Nervous life_stage Adult track_name ENCODE Middle frontal area BA46 (repl. 1) TF ChIP-seq CTCF IDR thresholded peaks (narrowPeak) [Experiment: ENCSR575WYM] [Life stage: Adult] [TF ChIP-seq peaks]
CTCF • A549 NGENCXLGYUWYVX • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq A549 TF Show metadata Download track Track metadata identifier NGENCXLGYUWYVX data_source ENCODE Download track Download number_of_intervals 44,364 bp_covered 17,097,201 output_type conservative IDR thresholded peaks genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR035OXA biological_replicate 1, 2, 3 technical_replicate 1_1, 2_1, 3_1 antibody CTCF assay TF ChIP-seq file_format bed narrowPeak file_size 812,405 downloaded_date 06/12/2022 release_date 10/02/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF390CYG.bed.gz processed_file_md5 9b7ae36b23632aa7921668f5c5beaf7f wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF390CYG.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF390CYG.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF390CYG/@@download/ENCFF390CYG.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF390CYG.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 16afc290a533dd0de8b9686a117c0ac1 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq CTCF conservative IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens A549;Lab=Tim Reddy, Duke;ENCODE_internal_tags=RegulomeDB_2_2,RegulomeDB_2_1;Life_stage_age=adult 58 years;Reference=NR;External_resources=FactorBook:ENCSR035OXA,GEO:GSE92782;Project=GGR;Award=U01HG007900;Experiment_date_released=2016-12-20;Submitted_track_name=rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=A549;ENCODE_cell_slims=cancer cell;ENCODE_system_slims=respiratory system;ENCODE_biosample_term_synonyms=A-549,A549 cell;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name ENCODE A549 (repl. 1, 2, 3) TF ChIP-seq CTCF conservative IDR thresholded peaks (narrowPeak) [Experiment: ENCSR035OXA] [Life stage: Adult] [TF ChIP-seq peaks]
CTCF • BJ NGENCXLXZFYM56 • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq BJ TF Show metadata Download track Track metadata identifier NGENCXLXZFYM56 data_source ENCODE Download track Download number_of_intervals 47,526 bp_covered 12,569,610 output_type IDR thresholded peaks genome_build hg38 cell_type BJ biosample_type Cell line biosample_term_id EFO:0002779 tissue_category Connective Tissue encode_experiment_id ENCSR000DQI biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CTCF assay TF ChIP-seq file_format bed narrowPeak file_size 814,796 downloaded_date 06/12/2022 release_date 09/26/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF434HEC.bed.gz processed_file_md5 8e022933c74ded7064a8f35957ba6678 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF434HEC.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF434HEC.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF434HEC/@@download/ENCFF434HEC.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF434HEC.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 7e33c676a8e6ae5071c4b017362771e6 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq CTCF IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens BJ;Lab=John Stamatoyannopoulos, UW;ENCODE_internal_tags=RegulomeDB_1_0,ccre_inputv2,RegulomeDB_2_0,RegulomeDB_2_1,ccre_inputv1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=NR;Reference=PMID:32728046;External_resources=SCREEN-GRCh38:foreskin_fibroblast_male_newborn_group_1,FactorBook:ENCSR000DQI,UCSC-ENCODE-hg19:wgEncodeEH000403,GEO:GSM749752;Project=ENCODE;Award=U54HG004592;Experiment_date_released=2011-03-17;Submitted_track_name=pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=BJ;ENCODE_cell_slims=fibroblast,connective tissue cell;ENCODE_system_slims=reproductive system;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002779;is_hg38_lifted=no system_category Skeletal life_stage Newborn track_name ENCODE BJ (repl. 1, 2) TF ChIP-seq CTCF IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000DQI] [Life stage: Newborn] [TF ChIP-seq peaks]
CTCF • Middle frontal area BA46 NGENCXMSOCARXM • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq Middle frontal area BA46 TF Show metadata Download track Track metadata identifier NGENCXMSOCARXM data_source ENCODE Download track Download number_of_intervals 33,495 bp_covered 11,433,529 output_type IDR thresholded peaks genome_build hg38 cell_type Middle frontal area BA46 biosample_type Tissue biosample_term_id UBERON:0006483 tissue_category Brain encode_experiment_id ENCSR525VXD biological_replicate 1 technical_replicate 1_1, 1_2 antibody CTCF assay TF ChIP-seq file_format bed narrowPeak file_size 585,569 downloaded_date 06/12/2022 release_date 06/23/2021 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF784LWO.bed.gz processed_file_md5 09cbd323c9d2b5414f43c5140c079f58 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF784LWO.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF784LWO.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF784LWO/@@download/ENCFF784LWO.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF784LWO.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 b3a0bd7b311433a0deb3d15a1bf2276c data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq CTCF IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens dorsolateral prefrontal cortex tissue female adult (90 or above years);Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RushAD,RegulomeDB_2_2,RegulomeDB_2_1;Life_stage_age=adult 90 or above years;Reference=NR;External_resources=GEO:GSE187566;Project=ENCODE;Award=UM1HG009390;Experiment_date_released=2021-07-23,2021-06-21;Submitted_track_name=rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=dorsolateral prefrontal cortex;ENCODE_cell_slims=NR;ENCODE_system_slims=central nervous system;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.8.0 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=UBERON:0006483;is_hg38_lifted=no system_category Nervous life_stage Adult track_name ENCODE Middle frontal area BA46 (repl. 1) TF ChIP-seq CTCF IDR thresholded peaks (narrowPeak) [Experiment: ENCSR525VXD] [Life stage: Adult] [TF ChIP-seq peaks]
CTCF • OCI-LY3 NGENCXNVHQI56M • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq OCI-LY3 TF Show metadata Download track Track metadata identifier NGENCXNVHQI56M data_source ENCODE Download track Download number_of_intervals 44,947 bp_covered 12,022,227 output_type IDR thresholded peaks genome_build hg38 cell_type OCI-LY3 biosample_type Cell line biosample_term_id EFO:0006710 tissue_category Blood encode_experiment_id ENCSR756ZKG biological_replicate 2 technical_replicate 2_1 antibody CTCF assay TF ChIP-seq file_format bed narrowPeak file_size 766,507 downloaded_date 06/12/2022 release_date 10/10/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF607GKE.bed.gz processed_file_md5 135e64eb70266de073db713a9a4ff5e0 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF607GKE.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF607GKE.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF607GKE/@@download/ENCFF607GKE.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF607GKE.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 59e89f398ecdc1a0da4786e70c017c1e data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq CTCF IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens OCI-LY3;Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_1_0,ccre_inputv2,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,RegulomeDB_2_2;Life_stage_age=adult 52 years;Reference=NR;External_resources=GEO:GSE123225,FactorBook:ENCSR756ZKG,SCREEN-GRCh38:OCI-LY3;Project=ENCODE;Award=U54HG006991;Experiment_date_released=2014-07-11;Submitted_track_name=rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=OCI-LY3;ENCODE_cell_slims=cancer cell;ENCODE_system_slims=skeletal system,immune system;ENCODE_biosample_term_synonyms=Oci-Ly-3,Oci-Ly-3 cell;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0006710;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name ENCODE OCI-LY3 (repl. 2) TF ChIP-seq CTCF IDR thresholded peaks (narrowPeak) [Experiment: ENCSR756ZKG] [Life stage: Adult] [TF ChIP-seq peaks]
CTCF • HEK293 NGENCXO5KFM6I2 • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq HEK293 TF Show metadata Download track Track metadata identifier NGENCXO5KFM6I2 data_source ENCODE Download track Download number_of_intervals 36,373 bp_covered 13,110,657 output_type IDR thresholded peaks genome_build hg38 cell_type HEK293 biosample_type Cell line biosample_term_id EFO:0001182 tissue_category Kidney encode_experiment_id ENCSR617IFZ biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CTCF assay TF ChIP-seq file_format bed narrowPeak file_size 726,045 downloaded_date 06/12/2022 release_date 08/07/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF821TIC.bed.gz processed_file_md5 48e0936843ef45e392cc572975965d2f wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF821TIC.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF821TIC.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF821TIC/@@download/ENCFF821TIC.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF821TIC.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 e73154cb4745594a581f0b15beba7976 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq CTCF IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens HEK293 genetically modified (insertion) using site-specific recombination targeting H. sapiens CTCF;Lab=Michael Snyder, Stanford;ENCODE_internal_tags=RegulomeDB_1_0,ccre_inputv2,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,RegulomeDB_2_2;Life_stage_age=NR;Reference=PMID:32728046;External_resources=FactorBook:ENCSR617IFZ,GEO:GSE91917,SCREEN-GRCh38:HEK293_genetically_modified_using_site-specific_recombination_originated_from_HEK293;Project=ENCODE;Award=U54HG006996;Experiment_date_released=2016-10-07;Submitted_track_name=pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=HEK293;ENCODE_cell_slims=epithelial cell;ENCODE_system_slims=excretory system;ENCODE_biosample_term_synonyms=human embryonic kidney cell;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=[Method:site-specific recombination|Category:insertion];schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001182;is_hg38_lifted=no system_category Renal life_stage Embryonic track_name ENCODE HEK293 (repl. 1, 2) TF ChIP-seq CTCF IDR thresholded peaks (narrowPeak) [Experiment: ENCSR617IFZ] [Life stage: Embryonic] [TF ChIP-seq peaks]
CTCF • CD8+ alpha-beta T cell NGENCXOFSBRTJR • ENCODE22955616 | 41168159 | 31713622 ChIA-PET CD8+ alpha-beta T cell Chromatin interactions Show metadata Download track Track metadata identifier NGENCXOFSBRTJR data_source ENCODE Download track Download number_of_intervals 46,302 bp_covered 33,139,011 output_type peaks genome_build hg38 cell_type CD8+ alpha-beta T cell biosample_type Primary cell biosample_term_id CL:0000625 tissue_category Blood encode_experiment_id ENCSR408MRB biological_replicate 1 technical_replicate 1_1 antibody CTCF assay ChIA-PET file_format bed broadPeak file_size 729,499 downloaded_date 06/12/2022 release_date 07/23/2021 date_added_to_filer 11/07/2022 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/ChIA-PET/broadPeak/hg38/ENCFF269RAY.bed.gz processed_file_md5 f00f5a970167af5c96a2f43ad86d3b2c wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/ChIA-PET/broadPeak/hg38/ENCFF269RAY.bed.gz -P GADB/Annotationtracks/ENCODE/data/ChIA-PET/broadPeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/ChIA-PET/broadPeak/hg38/ENCFF269RAY.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/ChIA-PET/broadPeak/hg38/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF269RAY/@@download/ENCFF269RAY.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF269RAY.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 336cf3f204b81558626bcc0403227c3b data_category Chromatin interactions Genomic feature type ChIA-PET CTCF peaks track_description version=2024;Biosample_summary=Homo sapiens activated CD8-positive, alpha-beta T cell male adult (21 years) treated with anti-CD3 and anti-CD28 coated beads for 36 hours;Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=adult 21 years;Reference=NR;External_resources=GEO:GSE187506;Project=ENCODE;Award=UM1HG009409;Experiment_date_released=2021-10-06;Submitted_track_name=LHT0044H.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=activated CD8-positive, alpha-beta T cell;ENCODE_cell_slims=T cell,leukocyte,hematopoietic cell;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=activated CD8-positive, alpha-beta T-lymphocyte,activated CD8-positive, alpha-beta T lymphocyte,activated CD8-positive, alpha-beta T-cell;Analysis_title=Lab custom GRCh38;GM=NR;schema=BED6+3;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=CL:0000906;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name ENCODE CD8+ alpha-beta T cell (repl. 1) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR408MRB] [Life stage: Adult] [Chromatin interactions]
CTCF • Osteoblast NGENCXOXPXPME4 • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq Osteoblast TF Show metadata Download track Track metadata identifier NGENCXOXPXPME4 data_source ENCODE Download track Download number_of_intervals 48,719 bp_covered 16,807,528 output_type IDR thresholded peaks genome_build hg38 cell_type Osteoblast biosample_type Primary cell biosample_term_id CL:0000062 tissue_category Bone encode_experiment_id ENCSR000APF biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CTCF assay TF ChIP-seq file_format bed narrowPeak file_size 851,923 downloaded_date 06/12/2022 release_date 09/26/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF491ZJZ.bed.gz processed_file_md5 1d056eef1b89d78273b6dfeec5b5495b wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF491ZJZ.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF491ZJZ.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF491ZJZ/@@download/ENCFF491ZJZ.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF491ZJZ.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 24809ccbe42f409158672a8dffdda595 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq CTCF IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens osteoblast;Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_1_0,ccre_inputv2,RegulomeDB_2_0,RegulomeDB_2_1,ccre_inputv1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=NR;Reference=PMID:32728046;External_resources=GEO:GSM733784,SCREEN-GRCh38:osteoblast,UCSC-ENCODE-hg19:wgEncodeEH001041,FactorBook:ENCSR000APF;Project=ENCODE;Award=U54HG004570;Experiment_date_released=2011-02-10;Submitted_track_name=pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=osteoblast;ENCODE_cell_slims=connective tissue cell;ENCODE_system_slims=skeletal system;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=CL:0000062;is_hg38_lifted=no system_category Skeletal life_stage Unknown track_name ENCODE Osteoblast (repl. 1, 2) TF ChIP-seq CTCF IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000APF] [TF ChIP-seq peaks]
CTCF • GM12873 NGENCXP5PMT3LU • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq GM12873 TF Show metadata Download track Track metadata identifier NGENCXP5PMT3LU data_source ENCODE Download track Download number_of_intervals 44,259 bp_covered 11,242,186 output_type IDR thresholded peaks genome_build hg38 cell_type GM12873 biosample_type Cell line biosample_term_id EFO:0001160 tissue_category Blood encode_experiment_id ENCSR000DRP biological_replicate 3 technical_replicate 3_1 antibody CTCF assay TF ChIP-seq file_format bed narrowPeak file_size 831,482 downloaded_date 06/12/2022 release_date 09/26/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF815DHU.bed.gz processed_file_md5 95920ac6764eba7c0d38b61be9988c92 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF815DHU.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF815DHU.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF815DHU/@@download/ENCFF815DHU.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF815DHU.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 4005500f28c4e8742a2a3435a94e1420 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq CTCF IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens GM12873;Lab=John Stamatoyannopoulos, UW;ENCODE_internal_tags=RegulomeDB_1_0,ccre_inputv2,RegulomeDB_2_0,RegulomeDB_2_1,ccre_inputv1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=NR;Reference=PMID:32728046;External_resources=UCSC-ENCODE-hg19:wgEncodeEH000450,FactorBook:ENCSR000DRP,GEO:GSM749730,SCREEN-GRCh38:GM12873;Project=ENCODE;Award=U54HG004592;Experiment_date_released=2012-01-17,2011-03-17;Submitted_track_name=rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=GM12873;ENCODE_cell_slims=hematopoietic cell,leukocyte,B cell;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001160;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name ENCODE GM12873 (repl. 3) TF ChIP-seq CTCF IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000DRP] [TF ChIP-seq peaks]
CTCF • CD14+ monocyte NGENCXPZXCOOJU • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq CD14+ monocyte TF Show metadata Download track Track metadata identifier NGENCXPZXCOOJU data_source ENCODE Download track Download number_of_intervals 57,313 bp_covered 33,859,279 output_type IDR thresholded peaks genome_build hg38 cell_type CD14+ monocyte biosample_type Primary cell biosample_term_id CL:0001054 tissue_category Blood encode_experiment_id ENCSR162KZY biological_replicate 1 technical_replicate 1_1, 1_2, 1_3 antibody CTCF assay TF ChIP-seq file_format bed narrowPeak file_size 959,281 downloaded_date 06/12/2022 release_date 06/06/2022 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF087XLR.bed.gz processed_file_md5 f933efb5f5df02325ec3f73ad0353f94 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF087XLR.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF087XLR.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF087XLR/@@download/ENCFF087XLR.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF087XLR.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 9c62c0c24c385595d09f83d0ce8ddae2 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq CTCF IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens CD14-positive monocyte male adult (30 years);Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_2_2,RegulomeDB_2_1;Life_stage_age=adult 30 years;Reference=NR;External_resources=GEO:GSE209089;Project=ENCODE;Award=UM1HG009390;Experiment_date_released=2022-06-09,2022-06-07;Submitted_track_name=rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=CD14-positive monocyte;ENCODE_cell_slims=hematopoietic cell,leukocyte,monocyte,myeloid cell;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.8.0 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=CL:0001054;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name ENCODE CD14+ monocyte (repl. 1) TF ChIP-seq CTCF IDR thresholded peaks (narrowPeak) [Experiment: ENCSR162KZY] [Life stage: Adult] [TF ChIP-seq peaks]
CTCF • RWPE2 NGENCXQ7ANURDL • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq RWPE2 TF Show metadata Download track Track metadata identifier NGENCXQ7ANURDL data_source ENCODE Download track Download number_of_intervals 101,494 bp_covered 75,982,366 output_type IDR thresholded peaks genome_build hg38 cell_type RWPE2 biosample_type Cell line biosample_term_id EFO:0007610 tissue_category Male Reproductive encode_experiment_id ENCSR856JJB biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CTCF assay TF ChIP-seq file_format bed narrowPeak file_size 1,627,103 downloaded_date 06/12/2022 release_date 09/01/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF604JNO.bed.gz processed_file_md5 8ac68108ef893e25d1a8acb7e6fdc2c8 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF604JNO.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF604JNO.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF604JNO/@@download/ENCFF604JNO.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF604JNO.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 f26ca29aaa877f55d8f8fc1305367ebc data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq CTCF IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens RWPE2;Lab=Michael Snyder, Stanford;ENCODE_internal_tags=RegulomeDB_1_0,ccre_inputv2,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,RegulomeDB_2_2;Life_stage_age=adult 54 years;Reference=NR;External_resources=SCREEN-GRCh38:RWPE2,FactorBook:ENCSR856JJB,GEO:GSE127595;Project=ENCODE;Award=U54HG006996;Experiment_date_released=2017-07-21,2017-01-31;Submitted_track_name=pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=RWPE2;ENCODE_cell_slims=epithelial cell;ENCODE_system_slims=reproductive system;ENCODE_biosample_term_synonyms=RWPE 2,CRL-11610,RWPE_2;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0007610;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name ENCODE RWPE2 (repl. 1, 2) TF ChIP-seq CTCF IDR thresholded peaks (narrowPeak) [Experiment: ENCSR856JJB] [Life stage: Adult] [TF ChIP-seq peaks]
CTCF • Fibroblast NGENCXRCWAR7CJ • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq Fibroblast TF Show metadata Download track Track metadata identifier NGENCXRCWAR7CJ data_source ENCODE Download track Download number_of_intervals 49,949 bp_covered 12,340,386 output_type IDR thresholded peaks genome_build hg38 cell_type Fibroblast biosample_type Primary cell biosample_term_id CL:0000057 tissue_category Skin encode_experiment_id ENCSR000APM biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CTCF assay TF ChIP-seq file_format bed narrowPeak file_size 844,412 downloaded_date 06/12/2022 release_date 09/26/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF986DNJ.bed.gz processed_file_md5 702b2b0c4c751a60d763e8fa3e465fab wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF986DNJ.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF986DNJ.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF986DNJ/@@download/ENCFF986DNJ.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF986DNJ.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 d44311c0d51c199c1787de87625fdb91 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq CTCF IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens fibroblast of dermis;Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_1_0,ccre_inputv2,RegulomeDB_2_0,RegulomeDB_2_1,ccre_inputv1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=NR;Reference=PMID:32728046;External_resources=FactorBook:ENCSR000APM,GEO:GSM733744,UCSC-ENCODE-hg19:wgEncodeEH001048,SCREEN-GRCh38:fibroblast_of_dermis;Project=ENCODE;Award=U54HG004570;Experiment_date_released=2011-02-10;Submitted_track_name=pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=fibroblast of dermis;ENCODE_cell_slims=fibroblast,connective tissue cell;ENCODE_system_slims=integumental system;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=CL:0002551;is_hg38_lifted=no system_category Integumentary life_stage Unknown track_name ENCODE Fibroblast (repl. 1, 2) TF ChIP-seq CTCF IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000APM] [TF ChIP-seq peaks]
CTCF • A549 NGENCXRP736FWJ • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq A549 TF Show metadata Download track Track metadata identifier NGENCXRP736FWJ data_source ENCODE Download track Download number_of_intervals 36,384 bp_covered 7,641,407 output_type conservative IDR thresholded peaks genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR000BHW biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CTCF assay TF ChIP-seq file_format bed narrowPeak file_size 594,231 downloaded_date 07/10/2025 release_date 09/26/2020 date_added_to_filer 07/30/2025 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF922DCK.bed.gz processed_file_md5 39a79ad142e8b13b99f5fbd6de686785 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF922DCK.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF922DCK.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF922DCK/@@download/ENCFF922DCK.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF922DCK.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 332711404419ab59ef59c18ca7605bdf data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq CTCF conservative IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens A549 treated with 0.02% ethanol for 1 hour;Lab=Richard Myers, HAIB;ENCODE_internal_tags=RegulomeDB_2_2,RegulomeDB_2_1,RegulomeDB_1_0,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_0;Life_stage_age=adult 58 years;Reference=PMID:32728046;External_resources=GEO:GSM803456,FactorBook:ENCSR000BHW,UCSC-ENCODE-hg19:wgEncodeEH001508;Project=ENCODE;Award=U54HG004576;Experiment_date_released=2011-07-18;Submitted_track_name=rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=A549;ENCODE_cell_slims=cancer cell;ENCODE_system_slims=respiratory system;ENCODE_biosample_term_synonyms=A-549,A549 cell;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name ENCODE A549 (repl. 1, 2) TF ChIP-seq CTCF conservative IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000BHW] [Life stage: Adult] [TF ChIP-seq peaks]
CTCF • Calu3 NGENCXTMEHXMOF • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq Calu3 TF Show metadata Download track Track metadata identifier NGENCXTMEHXMOF data_source ENCODE Download track Download number_of_intervals 34,578 bp_covered 14,205,975 output_type IDR thresholded peaks genome_build hg38 cell_type Calu3 biosample_type Cell line biosample_term_id EFO:0002819 tissue_category Lung encode_experiment_id ENCSR921ERP biological_replicate 1 technical_replicate 1_1, 1_2 antibody CTCF assay TF ChIP-seq file_format bed narrowPeak file_size 619,712 downloaded_date 06/12/2022 release_date 06/06/2022 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF526MDS.bed.gz processed_file_md5 b573410dcf5bc6049487b4e84236a599 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF526MDS.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF526MDS.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF526MDS/@@download/ENCFF526MDS.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF526MDS.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 3552f3168e7755a2a9b3889107a958b9 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq CTCF IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens Calu3;Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_2_2,RegulomeDB_2_1;Life_stage_age=adult 25 years;Reference=NR;External_resources=GEO:GSE208849;Project=ENCODE;Award=UM1HG009390;Experiment_date_released=2022-06-09,2022-06-07;Submitted_track_name=rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=Calu3;ENCODE_cell_slims=cancer cell;ENCODE_system_slims=NR;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.8.0 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002819;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name ENCODE Calu3 (repl. 1) TF ChIP-seq CTCF IDR thresholded peaks (narrowPeak) [Experiment: ENCSR921ERP] [Life stage: Adult] [TF ChIP-seq peaks]