H3K4me1 • Thyroid NGCEEZFW3TRMKG • CEEHRC ChIP-seq Thyroid Histone Show metadata identifier NGCEEZFW3TRMKG data_source CEEHRC Download track Download number_of_intervals 151,739 bp_covered 151,227,605 output_type peaks genome_build hg38 cell_type Thyroid biosample_type Primary tissue biosample_term_id UBERON:0002046 tissue_category Endocrine encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed bed3 file_size 1,258,211 downloaded_date 03/12/2021 release_date 10/12/2018 date_added_to_filer 01/19/2023 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/98734.CEEHRC.CEMT0132.H3K4me1.peak_calls.bed.gz processed_file_md5 afdae70a56ab1097ff1ae4eae4b135f9 wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/98734.CEEHRC.CEMT0132.H3K4me1.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/98734.CEEHRC.CEMT0132.H3K4me1.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/98734.CEEHRC.CEMT0132.H3K4me1.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/98734.CEEHRC.CEMT0132.H3K4me1.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 1aeb4d05cbdf5641bae9468b5587c7eb data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=build 2020-10;Original_cell_type=Thyroid;ID=CEMT0132;disease=None;donor_id=SW-TTP-164;donor_age=37;donor_sex=Female;sample_ontology=https://purl.obolibrary.org/obo/UBERON_0002046;schema=BED3;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org system_category Endocrine life_stage Adult track_name CEEHRC Thyroid ChIP-seq H3K4me1-histone-mark peaks (bed3) [Life stage: Adult] [Histone ChIP-seq peaks]
H3K27ac • Thyroid NGCEEZJUE66WAA • CEEHRC ChIP-seq Thyroid Histone Show metadata identifier NGCEEZJUE66WAA data_source CEEHRC Download track Download number_of_intervals 87,214 bp_covered 51,497,184 output_type peaks genome_build hg38 cell_type Thyroid biosample_type Primary tissue biosample_term_id UBERON:0002046 tissue_category Endocrine encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27ac assay ChIP-seq file_format bed bed3 file_size 638,749 downloaded_date 03/12/2021 release_date 10/11/2018 date_added_to_filer 01/19/2023 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/97998.CEEHRC.CEMT0086.H3K27ac.peak_calls.bed.gz processed_file_md5 7e2de6ee0bbc8e98c8185a60845f52e5 wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/97998.CEEHRC.CEMT0086.H3K27ac.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/97998.CEEHRC.CEMT0086.H3K27ac.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/97998.CEEHRC.CEMT0086.H3K27ac.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/97998.CEEHRC.CEMT0086.H3K27ac.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 1e8f32b850a96c58de2651e10209884e data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27ac peaks track_description version=build 2020-10;Original_cell_type=Thyroid;ID=CEMT0086;disease=None;donor_id=SW-TTP-141;donor_age=44;donor_sex=Female;sample_ontology=https://purl.obolibrary.org/obo/UBERON_0002046;schema=BED3;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org system_category Endocrine life_stage Adult track_name CEEHRC Thyroid ChIP-seq H3K27ac-histone-mark peaks (bed3) [Life stage: Adult] [Histone ChIP-seq peaks]
H3K4me3 • Luminal epithelial cell NGCEEZKSYITZMD • CEEHRC ChIP-seq Luminal epithelial cell Histone Show metadata identifier NGCEEZKSYITZMD data_source CEEHRC Download track Download number_of_intervals 23,216 bp_covered 33,441,128 output_type peaks genome_build hg38 cell_type Luminal epithelial cell biosample_type Primary cell biosample_term_id CL:0002326 tissue_category Female Reproductive encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me3 assay ChIP-seq file_format bed bed3 file_size 200,902 downloaded_date 03/12/2021 release_date 10/11/2018 date_added_to_filer 01/19/2023 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/97212.CEEHRC.CEMT0037.H3K4me3.peak_calls.bed.gz processed_file_md5 860416958958b16a1bfa3c6b37feec6e wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/97212.CEEHRC.CEMT0037.H3K4me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/97212.CEEHRC.CEMT0037.H3K4me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/97212.CEEHRC.CEMT0037.H3K4me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/97212.CEEHRC.CEMT0037.H3K4me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 b091e0e775ea020976f29b80eb5cd30e data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me3 peaks track_description version=build 2020-10;Original_cell_type=Luminal cells-mature;ID=CEMT0037;disease=None;donor_id=CEMT_35-38_pool;donor_age=NA;donor_sex=Female;sample_ontology=https://purl.obolibrary.org/obo/UBERON_0000310;schema=BED3;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=https://t system_category Reproductive life_stage Adult track_name CEEHRC Luminal epithelial cell ChIP-seq H3K4me3-histone-mark peaks (bed3) [Life stage: Adult] [Histone ChIP-seq peaks]
H3K4me1 • Kidney NGCEEZLYP5Q6N4 • CEEHRC ChIP-seq Kidney Histone Show metadata identifier NGCEEZLYP5Q6N4 data_source CEEHRC Download track Download number_of_intervals 266,633 bp_covered 266,318,458 output_type peaks genome_build hg38 cell_type Kidney biosample_type Primary tissue biosample_term_id UBERON:0002113 tissue_category Urinary encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed bed5 file_size 3,277,776 downloaded_date 03/12/2021 release_date 10/19/2020 date_added_to_filer 03/06/2025 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/83052.CEEHRC.MS002201.H3K4me1.peak_calls.bed.gz processed_file_md5 8d533241184315e6bdbbc2a41861e847 wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/83052.CEEHRC.MS002201.H3K4me1.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/83052.CEEHRC.MS002201.H3K4me1.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/83052.CEEHRC.MS002201.H3K4me1.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/83052.CEEHRC.MS002201.H3K4me1.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 be79047160611cc580e8725f26b8dac8 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=build 2020-10;Original_cell_type=Kidney;ID=MS002201;disease=Renal Cancer;donor_id=McGill0022;donor_age=54;donor_sex=Female;sample_ontology=https://purl.obolibrary.org/obo/UBERON_0002113;schema=BED5;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwang system_category Renal life_stage Adult track_name CEEHRC Kidney ChIP-seq H3K4me1-histone-mark peaks (bed5) [Life stage: Adult] [Histone ChIP-seq peaks]
H3K9me3 • Luminal epithelial cell NGCEEZM4YG2BQR • CEEHRC ChIP-seq Luminal epithelial cell Histone Show metadata identifier NGCEEZM4YG2BQR data_source CEEHRC Download track Download number_of_intervals 320,382 bp_covered 303,052,981 output_type peaks genome_build hg38 cell_type Luminal epithelial cell biosample_type Primary cell biosample_term_id CL:0002326 tissue_category Female Reproductive encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K9me3 assay ChIP-seq file_format bed bed3 file_size 2,544,937 downloaded_date 03/12/2021 release_date 10/31/2019 date_added_to_filer 01/19/2023 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/99384.CEEHRC.CEMT0200.H3K9me3.peak_calls.bed.gz processed_file_md5 2eeffc93302445574797d4b8867caf32 wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/99384.CEEHRC.CEMT0200.H3K9me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/99384.CEEHRC.CEMT0200.H3K9me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/99384.CEEHRC.CEMT0200.H3K9me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/99384.CEEHRC.CEMT0200.H3K9me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 2ad06f75e62f43e1e2c7e35e34920894 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K9me3 peaks track_description version=build 2020-10;Original_cell_type=Luminal cell;ID=CEMT0200;disease=None;donor_id=15-18;donor_age=48;donor_sex=Female;sample_ontology=https://purl.obolibrary.org/obo/CL_0002326;schema=BED3;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GAD system_category Reproductive life_stage Adult track_name CEEHRC Luminal epithelial cell ChIP-seq H3K9me3-histone-mark peaks (bed3) [Life stage: Adult] [Histone ChIP-seq peaks]
H3K36me3 • Skeletal muscle tissue NGCEEZNAMIHPP3 • CEEHRC ChIP-seq Skeletal muscle tissue Histone Show metadata identifier NGCEEZNAMIHPP3 data_source CEEHRC Download track Download number_of_intervals 110,476 bp_covered 218,167,695 output_type peaks genome_build hg38 cell_type Skeletal muscle tissue biosample_type Primary tissue biosample_term_id UBERON:0001134 tissue_category Skeletal Muscle encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K36me3 assay ChIP-seq file_format bed bed5 file_size 1,306,526 downloaded_date 03/12/2021 release_date 10/19/2020 date_added_to_filer 03/06/2025 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/82959.CEEHRC.MS001201.H3K36me3.peak_calls.bed.gz processed_file_md5 c6b57501aaa3288056ce54c3335def94 wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/82959.CEEHRC.MS001201.H3K36me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/82959.CEEHRC.MS001201.H3K36me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/82959.CEEHRC.MS001201.H3K36me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/82959.CEEHRC.MS001201.H3K36me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 10d18aa857ba80960a7676f686ce4fb3 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K36me3 peaks track_description version=build 2020-10;Original_cell_type=Skeletal muscle tissue;ID=MS001201;disease=Leigh Disease;donor_id=McGill0012;donor_age=NA;donor_sex=Female;sample_ontology=https://purl.obolibrary.org/obo/UBERON_0001134;schema=BED5;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=htt system_category Muscular life_stage Adult track_name CEEHRC Skeletal muscle tissue ChIP-seq H3K36me3-histone-mark peaks (bed5) [Life stage: Adult] [Histone ChIP-seq peaks]
H3K36me3 • Frontal lobe NGCEEZPBUJHQ73 • CEEHRC ChIP-seq Frontal lobe Histone Show metadata identifier NGCEEZPBUJHQ73 data_source CEEHRC Download track Download number_of_intervals 184,875 bp_covered 196,713,805 output_type peaks genome_build hg38 cell_type Frontal lobe biosample_type Primary tissue biosample_term_id UBERON:0016525 tissue_category Brain encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K36me3 assay ChIP-seq file_format bed bed3 file_size 1,472,444 downloaded_date 03/12/2021 release_date 10/12/2018 date_added_to_filer 01/19/2023 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/98498.CEEHRC.CEMT0075.H3K36me3.peak_calls.bed.gz processed_file_md5 8ea4de79ca0d2e32bbbca94726c62a8e wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/98498.CEEHRC.CEMT0075.H3K36me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/98498.CEEHRC.CEMT0075.H3K36me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/98498.CEEHRC.CEMT0075.H3K36me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/98498.CEEHRC.CEMT0075.H3K36me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 60edc615e95e193c7a2d20dc9df8eb8e data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K36me3 peaks track_description version=build 2020-10;Original_cell_type=Brain-Frontal Lobe-Left;ID=CEMT0075;disease=Brain Oligodendroglioma-Anaplastic;donor_id=VNA169;donor_age=44;donor_sex=Male;sample_ontology=https://purl.obolibrary.org/obo/CL_0000128;schema=BED3;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowle system_category Nervous life_stage Adult track_name CEEHRC Frontal lobe ChIP-seq H3K36me3-histone-mark peaks (bed3) [Life stage: Adult] [Histone ChIP-seq peaks]
H3K36me3 • Basal cell NGCEEZPJTGWA6Q • CEEHRC ChIP-seq Basal cell Histone Show metadata identifier NGCEEZPJTGWA6Q data_source CEEHRC Download track Download number_of_intervals 283,557 bp_covered 120,614,061 output_type peaks genome_build hg38 cell_type Basal cell biosample_type Primary cell biosample_term_id CL:0000646 tissue_category Skin encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K36me3 assay ChIP-seq file_format bed bed3 file_size 2,181,422 downloaded_date 03/12/2021 release_date 10/31/2019 date_added_to_filer 01/19/2023 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/99352.CEEHRC.CEMT0198.H3K36me3.peak_calls.bed.gz processed_file_md5 a187b3ced229fe2326cbf5416166be7b wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/99352.CEEHRC.CEMT0198.H3K36me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/99352.CEEHRC.CEMT0198.H3K36me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/99352.CEEHRC.CEMT0198.H3K36me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/99352.CEEHRC.CEMT0198.H3K36me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 20f21a2b4ec808f5f7c770a574240d9d data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K36me3 peaks track_description version=build 2020-10;Original_cell_type=Basal cells;ID=CEMT0198;disease=None;donor_id=15-18;donor_age=48;donor_sex=Female;sample_ontology=https://purl.obolibrary.org/obo/CL_0002324;schema=BED3;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB system_category Integumentary life_stage Fetal track_name CEEHRC Basal cell ChIP-seq H3K36me3-histone-mark peaks (bed3) [Life stage: Fetal] [Histone ChIP-seq peaks]
H3K27ac • Frontal lobe NGCEEZQTMMZ5XX • CEEHRC ChIP-seq Frontal lobe Histone Show metadata identifier NGCEEZQTMMZ5XX data_source CEEHRC Download track Download number_of_intervals 60,848 bp_covered 84,077,883 output_type peaks genome_build hg38 cell_type Frontal lobe biosample_type Primary tissue biosample_term_id UBERON:0016525 tissue_category Brain encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27ac assay ChIP-seq file_format bed bed3 file_size 519,598 downloaded_date 03/12/2021 release_date 10/12/2018 date_added_to_filer 01/19/2023 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/98579.CEEHRC.CEMT0081.H3K27ac.peak_calls.bed.gz processed_file_md5 a2059c0a4976be0dba76a76b4ce34bd0 wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/98579.CEEHRC.CEMT0081.H3K27ac.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/98579.CEEHRC.CEMT0081.H3K27ac.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/98579.CEEHRC.CEMT0081.H3K27ac.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/98579.CEEHRC.CEMT0081.H3K27ac.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 d14db7a9bae670420227372422deb906 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27ac peaks track_description version=build 2020-10;Original_cell_type=Brain-Frontal Lobe-Right;ID=CEMT0081;disease=Brain Oligodendroglioma-Anaplastic;donor_id=VNA118;donor_age=58;donor_sex=Female;sample_ontology=https://purl.obolibrary.org/obo/CL_0000128;schema=BED3;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_ackno system_category Nervous life_stage Adult track_name CEEHRC Frontal lobe ChIP-seq H3K27ac-histone-mark peaks (bed3) [Life stage: Adult] [Histone ChIP-seq peaks]
H3K36me3 • Skeletal muscle tissue NGCEEZSPI2JZGI • CEEHRC ChIP-seq Skeletal muscle tissue Histone Show metadata identifier NGCEEZSPI2JZGI data_source CEEHRC Download track Download number_of_intervals 164,984 bp_covered 251,286,259 output_type peaks genome_build hg38 cell_type Skeletal muscle tissue biosample_type Primary tissue biosample_term_id UBERON:0001134 tissue_category Skeletal Muscle encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K36me3 assay ChIP-seq file_format bed bed5 file_size 1,930,522 downloaded_date 03/12/2021 release_date 10/19/2020 date_added_to_filer 03/06/2025 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/82991.CEEHRC.MS001501.H3K36me3.peak_calls.bed.gz processed_file_md5 d1fd141ec635291d67f9d2042a589dbd wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/82991.CEEHRC.MS001501.H3K36me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/82991.CEEHRC.MS001501.H3K36me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/82991.CEEHRC.MS001501.H3K36me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/82991.CEEHRC.MS001501.H3K36me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 ab762d53a2477cc371ce2f3023fae3b4 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K36me3 peaks track_description version=build 2020-10;Original_cell_type=Skeletal muscle tissue;ID=MS001501;disease=Leigh Disease;donor_id=McGill0015;donor_age=7;donor_sex=Unknown;sample_ontology=https://purl.obolibrary.org/obo/UBERON_0001134;schema=BED5;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=htt system_category Muscular life_stage Child track_name CEEHRC Skeletal muscle tissue ChIP-seq H3K36me3-histone-mark peaks (bed5) [Life stage: Child] [Histone ChIP-seq peaks]
H3K9me3 • CD4+ naive NGCEEZT77AZQNT • CEEHRC ChIP-seq CD4+ naive Histone Show metadata identifier NGCEEZT77AZQNT data_source CEEHRC Download track Download number_of_intervals 112,967 bp_covered 129,021,659 output_type peaks genome_build hg38 cell_type CD4+ naive biosample_type Primary cell biosample_term_id CL:0000895 tissue_category Blood encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K9me3 assay ChIP-seq file_format bed bed3 file_size 924,787 downloaded_date 03/12/2021 release_date 10/12/2018 date_added_to_filer 01/19/2023 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/98683.CEEHRC.CEMT0147.H3K9me3.peak_calls.bed.gz processed_file_md5 5807a869d019a5e9c445d00775a71ad2 wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/98683.CEEHRC.CEMT0147.H3K9me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/98683.CEEHRC.CEMT0147.H3K9me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/98683.CEEHRC.CEMT0147.H3K9me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/98683.CEEHRC.CEMT0147.H3K9me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 83d550c0a8efb0029e61d47f8d4b04f2 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K9me3 peaks track_description version=build 2020-10;Original_cell_type=CD4 Naive;ID=CEMT0147;disease=None;donor_id=000N1;donor_age=0-1;donor_sex=Male;sample_ontology=https://purl.obolibrary.org/obo/UBERON_0010393;schema=BED3;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GAD system_category Cardiovascular life_stage Newborn track_name CEEHRC CD4+ naive ChIP-seq H3K9me3-histone-mark peaks (bed3) [Life stage: Newborn] [Histone ChIP-seq peaks]
H3K4me3 • Kidney NGCEEZUM2XVNRH • CEEHRC ChIP-seq Kidney Histone Show metadata identifier NGCEEZUM2XVNRH data_source CEEHRC Download track Download number_of_intervals 52,934 bp_covered 47,560,475 output_type peaks genome_build hg38 cell_type Kidney biosample_type Primary tissue biosample_term_id UBERON:0002113 tissue_category Urinary encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me3 assay ChIP-seq file_format bed bed5 file_size 707,816 downloaded_date 03/12/2021 release_date 10/19/2020 date_added_to_filer 03/06/2025 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/84199.CEEHRC.MS040101.H3K4me3.peak_calls.bed.gz processed_file_md5 2a5d68b29a5fba82d93edbb4e50ddf48 wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/84199.CEEHRC.MS040101.H3K4me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/84199.CEEHRC.MS040101.H3K4me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/84199.CEEHRC.MS040101.H3K4me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/84199.CEEHRC.MS040101.H3K4me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 0b32e194e3921ea2e86fb42f87aeca35 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me3 peaks track_description version=build 2020-10;Original_cell_type=Kidney;ID=MS040101;disease=Renal Cancer;donor_id=McGill0401;donor_age=50;donor_sex=Male;sample_ontology=https://purl.obolibrary.org/obo/UBERON_0002113;schema=BED5;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwangla system_category Renal life_stage Adult track_name CEEHRC Kidney ChIP-seq H3K4me3-histone-mark peaks (bed5) [Life stage: Adult] [Histone ChIP-seq peaks]
H3K4me3 • Luminal epithelial cell NGCEEZVCKZH2QX • CEEHRC ChIP-seq Luminal epithelial cell Histone Show metadata identifier NGCEEZVCKZH2QX data_source CEEHRC Download track Download number_of_intervals 33,959 bp_covered 50,376,229 output_type peaks genome_build hg38 cell_type Luminal epithelial cell biosample_type Primary cell biosample_term_id CL:0002326 tissue_category Female Reproductive encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me3 assay ChIP-seq file_format bed bed3 file_size 273,948 downloaded_date 03/12/2021 release_date 10/31/2019 date_added_to_filer 01/19/2023 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/99381.CEEHRC.CEMT0200.H3K4me3.peak_calls.bed.gz processed_file_md5 6580373e9db9d6c3b27d36e790b103e8 wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/99381.CEEHRC.CEMT0200.H3K4me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/99381.CEEHRC.CEMT0200.H3K4me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/99381.CEEHRC.CEMT0200.H3K4me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/99381.CEEHRC.CEMT0200.H3K4me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 dda6072bf01a9117d0628bdf90bbe7a1 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me3 peaks track_description version=build 2020-10;Original_cell_type=Luminal cell;ID=CEMT0200;disease=None;donor_id=15-18;donor_age=48;donor_sex=Female;sample_ontology=https://purl.obolibrary.org/obo/CL_0002326;schema=BED3;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GAD system_category Reproductive life_stage Adult track_name CEEHRC Luminal epithelial cell ChIP-seq H3K4me3-histone-mark peaks (bed3) [Life stage: Adult] [Histone ChIP-seq peaks]
H3K9me3 • Kidney NGCEEZVNCKMUUK • CEEHRC ChIP-seq Kidney Histone Show metadata identifier NGCEEZVNCKMUUK data_source CEEHRC Download track Download number_of_intervals 467 bp_covered 440,192 output_type peaks genome_build hg38 cell_type Kidney biosample_type Primary tissue biosample_term_id UBERON:0002113 tissue_category Urinary encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K9me3 assay ChIP-seq file_format bed bed5 file_size 6,240 downloaded_date 03/12/2021 release_date 10/19/2020 date_added_to_filer 03/06/2025 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/84274.CEEHRC.MS040301.H3K9me3.peak_calls.bed.gz processed_file_md5 2de50f906bba05bfab6904aec7aba8d4 wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/84274.CEEHRC.MS040301.H3K9me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/84274.CEEHRC.MS040301.H3K9me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/84274.CEEHRC.MS040301.H3K9me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/84274.CEEHRC.MS040301.H3K9me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 94036fcbabab3068397c0f96c2e8e699 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K9me3 peaks track_description version=build 2020-10;Original_cell_type=Kidney;ID=MS040301;disease=Normal;donor_id=McGill0403;donor_age=78;donor_sex=Male;sample_ontology=https://purl.obolibrary.org/obo/UBERON_0002113;schema=BED5;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/ system_category Renal life_stage Adult track_name CEEHRC Kidney ChIP-seq H3K9me3-histone-mark peaks (bed5) [Life stage: Adult] [Histone ChIP-seq peaks]
H3K4me1 • Basal cell NGCEEZWEUV4UEQ • CEEHRC ChIP-seq Basal cell Histone Show metadata identifier NGCEEZWEUV4UEQ data_source CEEHRC Download track Download number_of_intervals 186,957 bp_covered 152,749,135 output_type peaks genome_build hg38 cell_type Basal cell biosample_type Primary cell biosample_term_id CL:0000646 tissue_category Skin encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed bed3 file_size 1,514,355 downloaded_date 03/12/2021 release_date 10/11/2018 date_added_to_filer 01/19/2023 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/97171.CEEHRC.CEMT0035.H3K4me1.peak_calls.bed.gz processed_file_md5 2ba850967f6959a92da96b3250551de6 wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/97171.CEEHRC.CEMT0035.H3K4me1.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/97171.CEEHRC.CEMT0035.H3K4me1.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/97171.CEEHRC.CEMT0035.H3K4me1.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/97171.CEEHRC.CEMT0035.H3K4me1.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 5c820a75050bcb453bdabe7246c5e5e2 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=build 2020-10;Original_cell_type=Basal cells;ID=CEMT0035;disease=None;donor_id=CEMT_35-38_pool;donor_age=NA;donor_sex=Female;sample_ontology=https://purl.obolibrary.org/obo/UBERON_0000310;schema=BED3;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwa system_category Integumentary life_stage Adult track_name CEEHRC Basal cell ChIP-seq H3K4me1-histone-mark peaks (bed3) [Life stage: Adult] [Histone ChIP-seq peaks]
H3K9me3 • B cell NGCEEZWTFHQLSW • CEEHRC ChIP-seq B cell Histone Show metadata identifier NGCEEZWTFHQLSW data_source CEEHRC Download track Download number_of_intervals 3,853 bp_covered 1,005,074 output_type peaks genome_build hg38 cell_type B cell biosample_type Primary cell biosample_term_id CL:0000236 tissue_category Immune encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K9me3 assay ChIP-seq file_format bed bed5 file_size 49,926 downloaded_date 03/12/2021 release_date 10/19/2020 date_added_to_filer 03/06/2025 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/83876.CEEHRC.MS026701.H3K9me3.peak_calls.bed.gz processed_file_md5 1fe6f66f0149377b428b46cc78c529cc wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/83876.CEEHRC.MS026701.H3K9me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/83876.CEEHRC.MS026701.H3K9me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/83876.CEEHRC.MS026701.H3K9me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/83876.CEEHRC.MS026701.H3K9me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 20d95fa95d8dd414677272c596d19055 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K9me3 peaks track_description version=build 2020-10;Original_cell_type=B cell;ID=MS026701;disease=Pre B-cell acute lymphoblastic leukemia;donor_id=McGill0267;donor_age=NA;donor_sex=Female;sample_ontology=https://purl.obolibrary.org/obo/CL_0000236;schema=BED5;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgemen system_category Lymphatic life_stage Unknown track_name CEEHRC B cell ChIP-seq H3K9me3-histone-mark peaks (bed5) [Histone ChIP-seq peaks]
H3K9me3 • Thyroid NGCEEZY4LXZ6OM • CEEHRC ChIP-seq Thyroid Histone Show metadata identifier NGCEEZY4LXZ6OM data_source CEEHRC Download track Download number_of_intervals 138,631 bp_covered 148,894,681 output_type peaks genome_build hg38 cell_type Thyroid biosample_type Primary tissue biosample_term_id UBERON:0002046 tissue_category Endocrine encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K9me3 assay ChIP-seq file_format bed bed3 file_size 1,038,725 downloaded_date 03/12/2021 release_date 10/12/2018 date_added_to_filer 01/19/2023 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/98740.CEEHRC.CEMT0132.H3K9me3.peak_calls.bed.gz processed_file_md5 84541c0049b1d3be54c97edbe09611e3 wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/98740.CEEHRC.CEMT0132.H3K9me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/98740.CEEHRC.CEMT0132.H3K9me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/98740.CEEHRC.CEMT0132.H3K9me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/98740.CEEHRC.CEMT0132.H3K9me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 b0c3672c3027a359acd02ffacc785a1d data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K9me3 peaks track_description version=build 2020-10;Original_cell_type=Thyroid;ID=CEMT0132;disease=None;donor_id=SW-TTP-164;donor_age=37;donor_sex=Female;sample_ontology=https://purl.obolibrary.org/obo/UBERON_0002046;schema=BED3;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org system_category Endocrine life_stage Adult track_name CEEHRC Thyroid ChIP-seq H3K9me3-histone-mark peaks (bed3) [Life stage: Adult] [Histone ChIP-seq peaks]
H3K27ac • Stromal cell NGCEEZZVKBNHCQ • CEEHRC ChIP-seq Stromal cell Histone Show metadata identifier NGCEEZZVKBNHCQ data_source CEEHRC Download track Download number_of_intervals 35,029 bp_covered 45,292,681 output_type peaks genome_build hg38 cell_type Stromal cell biosample_type Primary cell biosample_term_id CL:0000499 tissue_category Connective Tissue encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27ac assay ChIP-seq file_format bed bed3 file_size 303,038 downloaded_date 03/12/2021 release_date 10/31/2019 date_added_to_filer 01/19/2023 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/99409.CEEHRC.CEMT0201.H3K27ac.peak_calls.bed.gz processed_file_md5 e67a7984215152aa0833c40d1090632e wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/99409.CEEHRC.CEMT0201.H3K27ac.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/99409.CEEHRC.CEMT0201.H3K27ac.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/99409.CEEHRC.CEMT0201.H3K27ac.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/99409.CEEHRC.CEMT0201.H3K27ac.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 fd251aca85427797a37a2ccdbe9d01ea data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27ac peaks track_description version=build 2020-10;Original_cell_type=Stromal cells;ID=CEMT0201;disease=None;donor_id=15-18;donor_age=48;donor_sex=Female;sample_ontology=https://purl.obolibrary.org/obo/CL_0002555;schema=BED3;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GA system_category Skeletal life_stage Fetal track_name CEEHRC Stromal cell ChIP-seq H3K27ac-histone-mark peaks (bed3) [Life stage: Fetal] [Histone ChIP-seq peaks]
Reference annotation NGCNTCKQ3SDDPI • Centromeres Annotation Reference annotation Genome annotations Show metadata identifier NGCNTCKQ3SDDPI data_source Centromeres Download track Download number_of_intervals 109 bp_covered 59,546,786 output_type genome annotation genome_build hg38 cell_type Not applicable biosample_type Not applicable biosample_term_id Not applicable tissue_category Not applicable encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody Not applicable assay Annotation file_format bed bed4 file_size 1,428 downloaded_date 03/09/2022 release_date 09/01/2014 date_added_to_filer 01/18/2023 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Centromeres/bed4/hg38/tb_centromere.sorted.bed.gz processed_file_md5 36e1271625bc8de3a6fb7476087cd67c wget_command wget https://filer2.niagads.org/Annotationtracks/Centromeres/bed4/hg38/tb_centromere.sorted.bed.gz -P FILER2/Annotationtracks/Centromeres/bed4/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Centromeres/bed4/hg38/tb_centromere.sorted.bed.gz.tbi -P FILER2/Annotationtracks/Centromeres/bed4/hg38/ link_out_url https://genome.ucsc.edu/index.html raw_file_url https://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg38&g=centromeres raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/Centromeres/hg38/tb_centromere.bed -P FILER2/Annotationtracks/Downloads/Centromeres/hg38/ raw_file_md5 58ec3c7bb04c6a4057428ab0d193590b data_category Genome annotations Genomic feature type Annotation genome annotation track_description version=2014;schema=BED4;dataSource_pubmed_id=24501022|34718705;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Centromeres.html;original_biosample_term_id=Not applicable;is_hg38_lifted=no system_category Not applicable life_stage Not applicable track_name Centromeres Annotation genome annotation (bed4) [Genome annotations]
Brain NGCRP224YCX3UR • NIAGADS NG00102 Cruchaga pQTLs pQTL Brain QTL Show metadata identifier NGCRP224YCX3UR data_source NIAGADS_NG00102_Cruchaga_pQTLs Download track Download number_of_intervals 19,641 bp_covered 19,641 output_type pQTL INDEL nominally significant associations genome_build hg38 cell_type Brain biosample_type Tissue biosample_term_id UBERON:0000955 tissue_category Brain encode_experiment_id Not applicable biological_replicate Not reported technical_replicate Not applicable antibody Not applicable assay pQTL file_format bed bed6+14 qtl file_size 1,186,564 downloaded_date 04/23/2024 release_date 12/21/2020 date_added_to_filer 07/14/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/NG00102/Brain/pQTL/nominally_significant/bed3plus17_qtl/hg38/formatted_output_X4889.82_Brain_OTHER_nominally_significant.bed.gz processed_file_md5 9ac047ee2715c4baaa97c1b8ba463f07 wget_command wget https://filer2.niagads.org/Annotationtracks/NG00102/Brain/pQTL/nominally_significant/bed3plus17_qtl/hg38/formatted_output_X4889.82_Brain_OTHER_nominally_significant.bed.gz -P FILER2/Annotationtracks/NG00102/Brain/pQTL/nominally_significant/bed3plus17_qtl/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/NG00102/Brain/pQTL/nominally_significant/bed3plus17_qtl/hg38/formatted_output_X4889.82_Brain_OTHER_nominally_significant.bed.gz.tbi -P FILER2/Annotationtracks/NG00102/Brain/pQTL/nominally_significant/bed3plus17_qtl/hg38/ link_out_url https://dss.niagads.org/open-access-data-portal/ raw_file_url https://st1.niagads.org/portal/v1/download-public/NG00102/fileset/32379 raw_file_download wget https://st1.niagads.org/portal/v1/download-public/NG00102/fileset/32379 -P FILER2/Annotationtracks/Downloads/NIAGADS/NG00102/ raw_file_md5 c3cf1b956a4381cfb1aea4d374436304 data_category QTL [Quantitative Trait Loci] Genomic feature type pQTL INDEL nominally significant associations track_description version=2024;Original_cell_type=Brain;doi=https://doi.org/10.1038/s41593-021-00886-6;pubmed_id=39528825;probe_ID=X4889.82;schema=BED6+14;dataSource_pubmed_id=39528825;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/NIAGADS_NG00102_Cruchaga_pQTLs.ht system_category Nervous life_stage Adult track_name NIAGADS_NG00102_Cruchaga_pQTLs Brain pQTL INDEL nominally significant associations (bed6+14 qtl) [Life stage: Adult] [QTL]