BACH1 • K562 NGFTBDHR5GKYNT • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBDHR5GKYNT data_source Factorbook Download track Download number_of_intervals 489 bp_covered 14,181 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR000EGD biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody BACH1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 12,544 downloaded_date 07/10/2024 release_date 05/14/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF026BDA_AACAGTYTGGCAGTTCCTCAAAARRTTAA_sorted.bed.gz processed_file_md5 bc42d6f63fd87a1c567f5805829e10f1 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF026BDA_AACAGTYTGGCAGTTCCTCAAAARRTTAA_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF026BDA_AACAGTYTGGCAGTTCCTCAAAARRTTAA_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF026BDA_AACAGTYTGGCAGTTCCTCAAAARRTTAA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF026BDA_AACAGTYTGGCAGTTCCTCAAAARRTTAA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 9d02662a4451c8f0acdcc19ae2afb4b2 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF026BDA;ENCODE_bigBed_id=ENCFF990JHI;PMID=34755879;Motif_sequence=AACAGTYTGGCAGTTCCTCAAAARRTTAA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding BACH1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000EGD] [Life stage: Adult] [TFBS]
BACH1 • K562 NGFTBHPLJJPY47 • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBHPLJJPY47 data_source Factorbook Download track Download number_of_intervals 115 bp_covered 3,335 output_type transcription factor binding sites significant genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR000EGD biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody BACH1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 2,845 downloaded_date 07/10/2024 release_date 05/14/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF026BDA_ACTCCTAGGTATATAYCCAAGAGAAATGA_filtered.bed.gz processed_file_md5 d31bf6ed10592bce97924f6c0135fc6e wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF026BDA_ACTCCTAGGTATATAYCCAAGAGAAATGA_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF026BDA_ACTCCTAGGTATATAYCCAAGAGAAATGA_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF026BDA_ACTCCTAGGTATATAYCCAAGAGAAATGA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF026BDA_ACTCCTAGGTATATAYCCAAGAGAAATGA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 c8599203e40b06328c2227d5ed828ef4 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF026BDA;ENCODE_bigBed_id=ENCFF990JHI;PMID=34755879;Motif_sequence=ACTCCTAGGTATATAYCCAAGAGAAATGA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding BACH1 transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR000EGD] [Life stage: Adult] [TFBS]
BACH1 • H1-hESC NGFTBISIP7WVTG • Factorbook34755879 Motif finding H1-hESC TFBS Show metadata Download track Track metadata identifier NGFTBISIP7WVTG data_source Factorbook Download track Download number_of_intervals 8,042 bp_covered 104,546 output_type transcription factor binding sites all genome_build hg38 cell_type H1-hESC biosample_type Cell line biosample_term_id EFO:0003042 tissue_category Embryo encode_experiment_id ENCSR000EBQ biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody BACH1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 119,424 downloaded_date 07/10/2024 release_date 05/14/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF749UPP_WNTGCTGASTCAB_sorted.bed.gz processed_file_md5 a1d62736d02492d5b8660b98153082a3 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF749UPP_WNTGCTGASTCAB_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF749UPP_WNTGCTGASTCAB_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF749UPP_WNTGCTGASTCAB.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF749UPP_WNTGCTGASTCAB.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 e47ca26e2e62534b7e5dd753e9cc78e1 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens H1;Original_cell_type=H1;Lab=Michael Snyder, Stanford;System=NR;ENCODE_BED_id=ENCFF749UPP;ENCODE_bigBed_id=ENCFF282VDB;PMID=34755879;Motif_sequence=WNTGCTGASTCAB;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0003042;is_hg38_lifted=no system_category Embryo life_stage Unknown track_name Factorbook H1-hESC (repl. 1, 2) Motif finding BACH1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000EBQ] [TFBS]
BACH1 • K562 NGFTBJTBMWA4FK • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBJTBMWA4FK data_source Factorbook Download track Download number_of_intervals 4,358 bp_covered 65,370 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR740NPG biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody BACH1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 61,583 downloaded_date 07/10/2024 release_date 06/13/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF678TXX_ATGGAGTYRCTCTGG_sorted.bed.gz processed_file_md5 41f82ca8cabfdef3c4cb19e23d7bde71 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF678TXX_ATGGAGTYRCTCTGG_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF678TXX_ATGGAGTYRCTCTGG_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF678TXX_ATGGAGTYRCTCTGG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF678TXX_ATGGAGTYRCTCTGG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 44b32bc6ad2ad8eb6dce44b6e8c82695 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562 stably expressing BACH1;Original_cell_type=K562;Lab=Kevin White, UChicago;System=immune system;ENCODE_BED_id=ENCFF678TXX;ENCODE_bigBed_id=ENCFF419VIM;PMID=34755879;Motif_sequence=ATGGAGTYRCTCTGG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding BACH1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR740NPG] [Life stage: Adult] [TFBS]
BACH1 • K562 NGFTBJTFZ7ZQSV • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBJTFZ7ZQSV data_source Factorbook Download track Download number_of_intervals 245 bp_covered 4,165 output_type transcription factor binding sites significant genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR740NPG biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody BACH1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 2,424 downloaded_date 07/10/2024 release_date 06/13/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF678TXX_TGTCAGAGGCRTTTGAA_filtered.bed.gz processed_file_md5 afbeb4c58b3706010632bd68a2a9a6e6 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF678TXX_TGTCAGAGGCRTTTGAA_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF678TXX_TGTCAGAGGCRTTTGAA_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF678TXX_TGTCAGAGGCRTTTGAA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF678TXX_TGTCAGAGGCRTTTGAA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 95d762711e553d244d3c158f0abe19be data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562 stably expressing BACH1;Original_cell_type=K562;Lab=Kevin White, UChicago;System=immune system;ENCODE_BED_id=ENCFF678TXX;ENCODE_bigBed_id=ENCFF419VIM;PMID=34755879;Motif_sequence=TGTCAGAGGCRTTTGAA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding BACH1 transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR740NPG] [Life stage: Adult] [TFBS]
BACH1 • K562 NGFTBLCXE7U6NE • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBLCXE7U6NE data_source Factorbook Download track Download number_of_intervals 5,179 bp_covered 56,969 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR000EGD biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody BACH1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 67,730 downloaded_date 07/10/2024 release_date 05/14/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF026BDA_TGCTGAGTCAB_sorted.bed.gz processed_file_md5 e9b335a73b5118e5fd25dc05555941ba wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF026BDA_TGCTGAGTCAB_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF026BDA_TGCTGAGTCAB_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF026BDA_TGCTGAGTCAB.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF026BDA_TGCTGAGTCAB.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 b325d3441d94b02bd7abfc4c7dff4406 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF026BDA;ENCODE_bigBed_id=ENCFF990JHI;PMID=34755879;Motif_sequence=TGCTGAGTCAB;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding BACH1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000EGD] [Life stage: Adult] [TFBS]
BACH1 • GM12878 NGFTBLWO4D4IOE • Factorbook34755879 Motif finding GM12878 TFBS Show metadata Download track Track metadata identifier NGFTBLWO4D4IOE data_source Factorbook Download track Download number_of_intervals 4,069 bp_covered 32,552 output_type transcription factor binding sites all genome_build hg38 cell_type GM12878 biosample_type Cell line biosample_term_id EFO:0002784 tissue_category Blood encode_experiment_id ENCSR636MKU biological_replicate 3, 4 technical_replicate 3_1, 4_1 antibody BACH1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 41,946 downloaded_date 07/10/2024 release_date 01/31/2017 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF631RZH_MTGACTCA_sorted.bed.gz processed_file_md5 509a1149e39ceed4029281abc70c3dd2 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF631RZH_MTGACTCA_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF631RZH_MTGACTCA_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF631RZH_MTGACTCA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF631RZH_MTGACTCA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 5d62feadda8e036807e2f65fc85f1e77 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens GM12878;Original_cell_type=GM12878;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF631RZH;ENCODE_bigBed_id=ENCFF576UEQ;PMID=34755879;Motif_sequence=MTGACTCA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002784;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name Factorbook GM12878 (repl. 3, 4) Motif finding BACH1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR636MKU] [TFBS]
BACH1 • H1-hESC NGFTBMMTMWHBEC • Factorbook34755879 Motif finding H1-hESC TFBS Show metadata Download track Track metadata identifier NGFTBMMTMWHBEC data_source Factorbook Download track Download number_of_intervals 7,428 bp_covered 111,420 output_type transcription factor binding sites all genome_build hg38 cell_type H1-hESC biosample_type Cell line biosample_term_id EFO:0003042 tissue_category Embryo encode_experiment_id ENCSR000EBQ biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody BACH1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 121,442 downloaded_date 07/10/2024 release_date 05/14/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF749UPP_DAWNTGCTGAGTCAY_sorted.bed.gz processed_file_md5 724ebb0d37b024d9ce3c7e68072ead01 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF749UPP_DAWNTGCTGAGTCAY_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF749UPP_DAWNTGCTGAGTCAY_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF749UPP_DAWNTGCTGAGTCAY.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF749UPP_DAWNTGCTGAGTCAY.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 c80cb84b70c1ebfafc7aedd88c75375d data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens H1;Original_cell_type=H1;Lab=Michael Snyder, Stanford;System=NR;ENCODE_BED_id=ENCFF749UPP;ENCODE_bigBed_id=ENCFF282VDB;PMID=34755879;Motif_sequence=DAWNTGCTGAGTCAY;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0003042;is_hg38_lifted=no system_category Embryo life_stage Unknown track_name Factorbook H1-hESC (repl. 1, 2) Motif finding BACH1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000EBQ] [TFBS]
BACH1 • K562 NGFTBQPZAFA4Q4 • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBQPZAFA4Q4 data_source Factorbook Download track Download number_of_intervals 10,613 bp_covered 137,969 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR740NPG biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody BACH1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 142,434 downloaded_date 07/10/2024 release_date 06/13/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF678TXX_ATGACTCAGCANW_sorted.bed.gz processed_file_md5 e8643e06906a6f482701ad369765ce48 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF678TXX_ATGACTCAGCANW_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF678TXX_ATGACTCAGCANW_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF678TXX_ATGACTCAGCANW.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF678TXX_ATGACTCAGCANW.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 96eeab091b0ce634af7d619966afb05d data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562 stably expressing BACH1;Original_cell_type=K562;Lab=Kevin White, UChicago;System=immune system;ENCODE_BED_id=ENCFF678TXX;ENCODE_bigBed_id=ENCFF419VIM;PMID=34755879;Motif_sequence=ATGACTCAGCANW;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding BACH1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR740NPG] [Life stage: Adult] [TFBS]
BACH1 • GM12878 NGFTBTCNTTZ7AR • Factorbook34755879 Motif finding GM12878 TFBS Show metadata Download track Track metadata identifier NGFTBTCNTTZ7AR data_source Factorbook Download track Download number_of_intervals 4,692 bp_covered 70,380 output_type transcription factor binding sites all genome_build hg38 cell_type GM12878 biosample_type Cell line biosample_term_id EFO:0002784 tissue_category Blood encode_experiment_id ENCSR636MKU biological_replicate 3, 4 technical_replicate 3_1, 4_1 antibody BACH1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 79,137 downloaded_date 07/10/2024 release_date 01/31/2017 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF631RZH_WWNTGCTGAGTCATN_sorted.bed.gz processed_file_md5 c64cafa9ce032c2448305d5ee65f2dab wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF631RZH_WWNTGCTGAGTCATN_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF631RZH_WWNTGCTGAGTCATN_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF631RZH_WWNTGCTGAGTCATN.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF631RZH_WWNTGCTGAGTCATN.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 2dd6b1a0e181ebee3ee44f105b7ac0d6 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens GM12878;Original_cell_type=GM12878;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF631RZH;ENCODE_bigBed_id=ENCFF576UEQ;PMID=34755879;Motif_sequence=WWNTGCTGAGTCATN;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002784;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name Factorbook GM12878 (repl. 3, 4) Motif finding BACH1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR636MKU] [TFBS]
BACH1 • K562 NGFTBTG5QK2744 • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBTG5QK2744 data_source Factorbook Download track Download number_of_intervals 4,385 bp_covered 65,775 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR000EGD biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody BACH1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 77,495 downloaded_date 07/10/2024 release_date 05/14/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF026BDA_ATGACTCAGCANWTY_sorted.bed.gz processed_file_md5 bd6cf350a90dd62c06bf78836ebddaa5 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF026BDA_ATGACTCAGCANWTY_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF026BDA_ATGACTCAGCANWTY_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF026BDA_ATGACTCAGCANWTY.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF026BDA_ATGACTCAGCANWTY.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 a8af8dad1503d9bcab6ccb877839938b data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF026BDA;ENCODE_bigBed_id=ENCFF990JHI;PMID=34755879;Motif_sequence=ATGACTCAGCANWTY;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding BACH1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000EGD] [Life stage: Adult] [TFBS]
BACH1 • K562 NGFTBVTXEBSIM5 • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBVTXEBSIM5 data_source Factorbook Download track Download number_of_intervals 3,607 bp_covered 61,319 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR740NPG biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody BACH1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 55,484 downloaded_date 07/10/2024 release_date 06/13/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF678TXX_TGTCAGAGGCRTTTGAA_sorted.bed.gz processed_file_md5 87126fa0ff7b9451b5296721c9d27dc3 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF678TXX_TGTCAGAGGCRTTTGAA_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF678TXX_TGTCAGAGGCRTTTGAA_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF678TXX_TGTCAGAGGCRTTTGAA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF678TXX_TGTCAGAGGCRTTTGAA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 95d762711e553d244d3c158f0abe19be data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562 stably expressing BACH1;Original_cell_type=K562;Lab=Kevin White, UChicago;System=immune system;ENCODE_BED_id=ENCFF678TXX;ENCODE_bigBed_id=ENCFF419VIM;PMID=34755879;Motif_sequence=TGTCAGAGGCRTTTGAA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding BACH1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR740NPG] [Life stage: Adult] [TFBS]
BACH1 • K562 NGFTBVWL7X4DHB • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBVWL7X4DHB data_source Factorbook Download track Download number_of_intervals 650 bp_covered 18,850 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR000EGD biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody BACH1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 16,005 downloaded_date 07/10/2024 release_date 05/14/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF026BDA_ACTCCTAGGTATATAYCCAAGAGAAATGA_sorted.bed.gz processed_file_md5 e4ced294ead0e1402701002cdfb775f2 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF026BDA_ACTCCTAGGTATATAYCCAAGAGAAATGA_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF026BDA_ACTCCTAGGTATATAYCCAAGAGAAATGA_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF026BDA_ACTCCTAGGTATATAYCCAAGAGAAATGA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF026BDA_ACTCCTAGGTATATAYCCAAGAGAAATGA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 c8599203e40b06328c2227d5ed828ef4 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF026BDA;ENCODE_bigBed_id=ENCFF990JHI;PMID=34755879;Motif_sequence=ACTCCTAGGTATATAYCCAAGAGAAATGA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding BACH1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000EGD] [Life stage: Adult] [TFBS]
BACH1 • K562 NGFTBX7GFHFVJI • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBX7GFHFVJI data_source Factorbook Download track Download number_of_intervals 3,985 bp_covered 119,550 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR740NPG biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody BACH1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 80,321 downloaded_date 07/10/2024 release_date 06/13/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF678TXX_CAGCCTYATTTTACCCAGCCCCTATTCAAG_sorted.bed.gz processed_file_md5 234c82559b8bdc0ee92f2b65a035b124 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF678TXX_CAGCCTYATTTTACCCAGCCCCTATTCAAG_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF678TXX_CAGCCTYATTTTACCCAGCCCCTATTCAAG_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF678TXX_CAGCCTYATTTTACCCAGCCCCTATTCAAG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF678TXX_CAGCCTYATTTTACCCAGCCCCTATTCAAG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 0e99008cdd8e3cc34c650e2232413551 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562 stably expressing BACH1;Original_cell_type=K562;Lab=Kevin White, UChicago;System=immune system;ENCODE_BED_id=ENCFF678TXX;ENCODE_bigBed_id=ENCFF419VIM;PMID=34755879;Motif_sequence=CAGCCTYATTTTACCCAGCCCCTATTCAAG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding BACH1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR740NPG] [Life stage: Adult] [TFBS]
BACH1 • K562 NGFTBYDTKIARKR • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBYDTKIARKR data_source Factorbook Download track Download number_of_intervals 586 bp_covered 17,580 output_type transcription factor binding sites significant genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR740NPG biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody BACH1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 8,395 downloaded_date 07/10/2024 release_date 06/13/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF678TXX_CAGCCTYATTTTACCCAGCCCCTATTCAAG_filtered.bed.gz processed_file_md5 46d3a75772186ba0d6a52ca52162f84f wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF678TXX_CAGCCTYATTTTACCCAGCCCCTATTCAAG_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF678TXX_CAGCCTYATTTTACCCAGCCCCTATTCAAG_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF678TXX_CAGCCTYATTTTACCCAGCCCCTATTCAAG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF678TXX_CAGCCTYATTTTACCCAGCCCCTATTCAAG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 0e99008cdd8e3cc34c650e2232413551 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562 stably expressing BACH1;Original_cell_type=K562;Lab=Kevin White, UChicago;System=immune system;ENCODE_BED_id=ENCFF678TXX;ENCODE_bigBed_id=ENCFF419VIM;PMID=34755879;Motif_sequence=CAGCCTYATTTTACCCAGCCCCTATTCAAG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding BACH1 transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR740NPG] [Life stage: Adult] [TFBS]
Reference annotation (BACH1) NGHOMG7BZD5PSK • HOMER20513432 Motif finding Reference annotation (BACH1) TFBS Show metadata Download track Track metadata identifier NGHOMG7BZD5PSK data_source HOMER Download track Download number_of_intervals 60,505 bp_covered 907,575 output_type transcription factor binding sites genome_build hg38 cell_type Not applicable biosample_type Not applicable biosample_term_id Not applicable tissue_category Not applicable encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody BACH1 assay Motif finding file_format bed bed6+5 Homer file_size 763,513 downloaded_date 08/12/2023 release_date 10/19/2020 date_added_to_filer 12/19/2025 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Homer/bed11/hg38/Bach1_bZIP.hg38.processed.bed.gz processed_file_md5 571afc993001ce6fb3ae777d6661a26b wget_command wget https://filer2.niagads.org/Annotationtracks/Homer/bed11/hg38/Bach1_bZIP.hg38.processed.bed.gz -P GADB/Annotationtracks/Homer/bed11/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Homer/bed11/hg38/Bach1_bZIP.hg38.processed.bed.gz.tbi -P GADB/Annotationtracks/Homer/bed11/hg38/ link_out_url https://homer.ucsd.edu/homer/ raw_file_url https://homer.ucsd.edu/homer/data/motifs/homer.KnownMotifs.hg38.191020.bed.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/Homer/homer.KnownMotifs.hg38.191020.bed.gz -P GADB/Annotationtracks/Downloads/Homer/ raw_file_md5 7f59c5d4bbf50fea7476a173961ea174 data_category TFBS [Transcription Factor Binding Site] Genomic feature type HOMER transcription factor binding sites track_description version=191020;TF_name=Bach1;DNA_binding_domain=bZIP;Cell_type=K562;Assay=ChIP-Seq;Origin=GSE31477;schema=BED6+5;dataSource_pubmed_id=20513432;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/HOMER.html;original_biosample_term_id=Not applicable;is_hg38_lifted=no system_category Not applicable life_stage Not applicable track_name HOMER Motif finding BACH1 transcription factor binding sites (bed6+5 Homer) [TFBS]
BACH2 • SK-N-SH NGENCMGAI25W3I • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq SK-N-SH TF Show metadata Download track Track metadata identifier NGENCMGAI25W3I data_source ENCODE Download track Download number_of_intervals 929 bp_covered 278,715 output_type IDR thresholded peaks genome_build hg38 cell_type SK-N-SH biosample_type Cell line biosample_term_id EFO:0003072 tissue_category Brain encode_experiment_id ENCSR036THH biological_replicate 1 technical_replicate 1_1 antibody BACH2 assay TF ChIP-seq file_format bed narrowPeak file_size 18,117 downloaded_date 06/12/2022 release_date 06/04/2021 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF457UMK.bed.gz processed_file_md5 9b3155043f457d1d521158236e5cbc6a wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF457UMK.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF457UMK.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF457UMK/@@download/ENCFF457UMK.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF457UMK.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 a98120d36a78f0c4a221438403a49317 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens SK-N-SH genetically modified (insertion) using CRISPR targeting H. sapiens BACH2 treated with 6 _M all-trans-retinoic acid for 48 hours;Lab=Michael Snyder, Stanford;ENCODE_internal_tags=RegulomeDB_2_2,RegulomeDB_2_1;Life_stage_age=child 4 years;Reference=NR;External_resources=GEO:GSE187158;Project=ENCODE;Award=UM1HG009442;Experiment_date_released=2021-06-10,2021-05-18,2020-10-16;Submitted_track_name=rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=SK-N-SH;ENCODE_cell_slims=neuroblastoma cell,cancer cell;ENCODE_system_slims=central nervous system;ENCODE_biosample_term_synonyms=SKNSH;Analysis_title=ENCODE4 v1.9.0 GRCh38;GM=[Method:CRISPR|Category:insertion];schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0003072;is_hg38_lifted=no system_category Nervous life_stage Child track_name ENCODE SK-N-SH (repl. 1) TF ChIP-seq BACH2 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR036THH] [Life stage: Child] [TF ChIP-seq peaks]
BACH2 • SK-N-SH NGENCP7YVONE2B • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq SK-N-SH TF Show metadata Download track Track metadata identifier NGENCP7YVONE2B data_source ENCODE Download track Download number_of_intervals 899 bp_covered 268,084 output_type conservative IDR thresholded peaks genome_build hg38 cell_type SK-N-SH biosample_type Cell line biosample_term_id EFO:0003072 tissue_category Brain encode_experiment_id ENCSR036THH biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody BACH2 assay TF ChIP-seq file_format bed narrowPeak file_size 18,885 downloaded_date 06/12/2022 release_date 06/04/2021 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF209NFP.bed.gz processed_file_md5 4cb171a9aaefbc445f35e9b55f80b0d2 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF209NFP.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF209NFP.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF209NFP/@@download/ENCFF209NFP.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF209NFP.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 0dc97138960e9377dbffd8932fdd4f3c data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq conservative IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens SK-N-SH genetically modified (insertion) using CRISPR targeting H. sapiens BACH2 treated with 6 _M all-trans-retinoic acid for 48 hours;Lab=Michael Snyder, Stanford;ENCODE_internal_tags=RegulomeDB_2_2,RegulomeDB_2_1;Life_stage_age=child 4 years;Reference=NR;External_resources=GEO:GSE187158;Project=ENCODE;Award=UM1HG009442;Experiment_date_released=2021-06-10,2021-05-18,2020-10-16;Submitted_track_name=rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=SK-N-SH;ENCODE_cell_slims=neuroblastoma cell,cancer cell;ENCODE_system_slims=central nervous system;ENCODE_biosample_term_synonyms=SKNSH;Analysis_title=ENCODE4 v1.9.0 GRCh38;GM=[Method:CRISPR|Category:insertion];schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0003072;is_hg38_lifted=no system_category Nervous life_stage Child track_name ENCODE SK-N-SH (repl. 1, 2) TF ChIP-seq BACH2 conservative IDR thresholded peaks (narrowPeak) [Experiment: ENCSR036THH] [Life stage: Child] [TF ChIP-seq peaks]
BACH2 • SK-N-SH NGENCSD4D4NL3B • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq SK-N-SH TF Show metadata Download track Track metadata identifier NGENCSD4D4NL3B data_source ENCODE Download track Download number_of_intervals 300 bp_covered 86,943 output_type IDR thresholded peaks genome_build hg38 cell_type SK-N-SH biosample_type Cell line biosample_term_id EFO:0003072 tissue_category Brain encode_experiment_id ENCSR036THH biological_replicate 2 technical_replicate 2_1 antibody BACH2 assay TF ChIP-seq file_format bed narrowPeak file_size 6,193 downloaded_date 06/12/2022 release_date 06/04/2021 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF967YUH.bed.gz processed_file_md5 9efb93a6d65e56d06345048a76e9a1da wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF967YUH.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF967YUH.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF967YUH/@@download/ENCFF967YUH.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF967YUH.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 3bd5995ff39f9a78a70e6ae11abea383 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens SK-N-SH genetically modified (insertion) using CRISPR targeting H. sapiens BACH2 treated with 6 _M all-trans-retinoic acid for 48 hours;Lab=Michael Snyder, Stanford;ENCODE_internal_tags=RegulomeDB_2_2,RegulomeDB_2_1;Life_stage_age=child 4 years;Reference=NR;External_resources=GEO:GSE187158;Project=ENCODE;Award=UM1HG009442;Experiment_date_released=2021-06-10,2021-05-18,2020-10-16;Submitted_track_name=rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=SK-N-SH;ENCODE_cell_slims=neuroblastoma cell,cancer cell;ENCODE_system_slims=central nervous system;ENCODE_biosample_term_synonyms=SKNSH;Analysis_title=ENCODE4 v1.9.0 GRCh38;GM=[Method:CRISPR|Category:insertion];schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0003072;is_hg38_lifted=no system_category Nervous life_stage Child track_name ENCODE SK-N-SH (repl. 2) TF ChIP-seq BACH2 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR036THH] [Life stage: Child] [TF ChIP-seq peaks]
BACH2 • SK-N-SH NGENCVDTQDWOVZ • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq SK-N-SH TF Show metadata Download track Track metadata identifier NGENCVDTQDWOVZ data_source ENCODE Download track Download number_of_intervals 1,274 bp_covered 380,362 output_type IDR thresholded peaks genome_build hg38 cell_type SK-N-SH biosample_type Cell line biosample_term_id EFO:0003072 tissue_category Brain encode_experiment_id ENCSR036THH biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody BACH2 assay TF ChIP-seq file_format bed narrowPeak file_size 26,329 downloaded_date 06/12/2022 release_date 06/04/2021 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF518OYX.bed.gz processed_file_md5 2df1ccc9df6c80db282275278a9da3e1 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF518OYX.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF518OYX.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF518OYX/@@download/ENCFF518OYX.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF518OYX.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 01ca5da71162740567c4495a732f624f data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens SK-N-SH genetically modified (insertion) using CRISPR targeting H. sapiens BACH2 treated with 6 _M all-trans-retinoic acid for 48 hours;Lab=Michael Snyder, Stanford;ENCODE_internal_tags=RegulomeDB_2_2,RegulomeDB_2_1;Life_stage_age=child 4 years;Reference=NR;External_resources=GEO:GSE187158;Project=ENCODE;Award=UM1HG009442;Experiment_date_released=2021-06-10,2021-05-18,2020-10-16;Submitted_track_name=pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=SK-N-SH;ENCODE_cell_slims=neuroblastoma cell,cancer cell;ENCODE_system_slims=central nervous system;ENCODE_biosample_term_synonyms=SKNSH;Analysis_title=ENCODE4 v1.9.0 GRCh38;GM=[Method:CRISPR|Category:insertion];schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0003072;is_hg38_lifted=no system_category Nervous life_stage Child track_name ENCODE SK-N-SH (repl. 1, 2) TF ChIP-seq BACH2 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR036THH] [Life stage: Child] [TF ChIP-seq peaks]