DDX20 • K562 NGENCBCAP2WI6R • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq K562 TF Show metadata Download track Track metadata identifier NGENCBCAP2WI6R data_source ENCODE Download track Download number_of_intervals 2,360 bp_covered 780,036 output_type IDR thresholded peaks genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR382AIB biological_replicate 1 technical_replicate 1_1 antibody DDX20 assay TF ChIP-seq file_format bed narrowPeak file_size 47,352 downloaded_date 06/12/2022 release_date 11/27/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF621BIK.bed.gz processed_file_md5 4c776ec5ef0aa32402418152b9755999 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF621BIK.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF621BIK.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF621BIK/@@download/ENCFF621BIK.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF621BIK.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 48c430fccf9ae7a6e4600cd5ea628b17 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens K562 stably expressing DDX20;Lab=Michael Snyder, Stanford;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,ENCYCLOPEDIAv2,RegulomeDB_2_1,RegulomeDB_2_2;Life_stage_age=adult 53 years;Reference=PMID:32728046;External_resources=GEO:GSE91711;Project=ENCODE;Award=U54HG006996;Experiment_date_released=2016-02-16;Submitted_track_name=rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=hematopoietic cell,cancer cell,leukocyte;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=K-562, K562 cell,K-562 cell;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name ENCODE K562 (repl. 1) TF ChIP-seq DDX20 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR382AIB] [Life stage: Adult] [TF ChIP-seq peaks]
DDX20 • K562 NGENCHRJJYYNQG • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq K562 TF Show metadata Download track Track metadata identifier NGENCHRJJYYNQG data_source ENCODE Download track Download number_of_intervals 2,150 bp_covered 722,806 output_type IDR thresholded peaks genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR382AIB biological_replicate 2 technical_replicate 2_1 antibody DDX20 assay TF ChIP-seq file_format bed narrowPeak file_size 42,291 downloaded_date 06/12/2022 release_date 11/27/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF449IHW.bed.gz processed_file_md5 4019370f0e3fdec47d20247bfbdbfe5d wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF449IHW.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF449IHW.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF449IHW/@@download/ENCFF449IHW.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF449IHW.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 8ff3f9d24705ace00fbcdc26d4cd2acb data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens K562 stably expressing DDX20;Lab=Michael Snyder, Stanford;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,ENCYCLOPEDIAv2,RegulomeDB_2_1,RegulomeDB_2_2;Life_stage_age=adult 53 years;Reference=PMID:32728046;External_resources=GEO:GSE91711;Project=ENCODE;Award=U54HG006996;Experiment_date_released=2016-02-16;Submitted_track_name=rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=hematopoietic cell,cancer cell,leukocyte;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=K-562, K562 cell,K-562 cell;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name ENCODE K562 (repl. 2) TF ChIP-seq DDX20 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR382AIB] [Life stage: Adult] [TF ChIP-seq peaks]
DDX20 • MCF-7 NGENCK32J7QOPJ • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq MCF-7 TF Show metadata Download track Track metadata identifier NGENCK32J7QOPJ data_source ENCODE Download track Download number_of_intervals 1,692 bp_covered 379,699 output_type conservative IDR thresholded peaks genome_build hg38 cell_type MCF-7 biosample_type Cell line biosample_term_id EFO:0001203 tissue_category Breast encode_experiment_id ENCSR330ADN biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody DDX20 assay TF ChIP-seq file_format bed narrowPeak file_size 34,565 downloaded_date 06/12/2022 release_date 02/04/2021 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF144QBA.bed.gz processed_file_md5 8791e76a4ba2d12296dd71aa8dd99f71 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF144QBA.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF144QBA.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF144QBA/@@download/ENCFF144QBA.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF144QBA.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 700e2e95c0a9f733e39d59f0168f3423 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq conservative IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens MCF-7;Lab=Michael Snyder, Stanford;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,ENCYCLOPEDIAv2,RegulomeDB_2_1,RegulomeDB_2_2;Life_stage_age=adult 69 years;Reference=NR;External_resources=GEO:GSE105517;Project=ENCODE;Award=U54HG006996;Experiment_date_released=2017-06-29,2016-09-20;Submitted_track_name=rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=MCF-7;ENCODE_cell_slims=epithelial cell,cancer cell;ENCODE_system_slims=integumental system,exocrine system;ENCODE_biosample_term_synonyms=MCF7 cell,MCF7,MCF-7 cell;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001203;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name ENCODE MCF-7 (repl. 1, 2) TF ChIP-seq DDX20 conservative IDR thresholded peaks (narrowPeak) [Experiment: ENCSR330ADN] [Life stage: Adult] [TF ChIP-seq peaks]
DDX20 • K562 NGENCK4ZCAI7PF • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq K562 TF Show metadata Download track Track metadata identifier NGENCK4ZCAI7PF data_source ENCODE Download track Download number_of_intervals 4,600 bp_covered 1,499,991 output_type IDR thresholded peaks genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR446LAV biological_replicate 2 technical_replicate 2_1 antibody DDX20 assay TF ChIP-seq file_format bed narrowPeak file_size 90,920 downloaded_date 06/12/2022 release_date 12/08/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF665MFN.bed.gz processed_file_md5 f81cc42014c65595c8f5dd1e603a60f6 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF665MFN.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF665MFN.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF665MFN/@@download/ENCFF665MFN.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF665MFN.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 2c02ea25fdacc1e592db6d4d290033d3 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens K562;Lab=Michael Snyder, Stanford;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,ENCYCLOPEDIAv2,RegulomeDB_2_1,RegulomeDB_2_2;Life_stage_age=adult 53 years;Reference=PMID:32728046;External_resources=GEO:GSE91767;Project=ENCODE;Award=U54HG006996;Experiment_date_released=2016-04-22,2014-07-07;Submitted_track_name=rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=hematopoietic cell,cancer cell,leukocyte;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=K-562, K562 cell,K-562 cell;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name ENCODE K562 (repl. 2) TF ChIP-seq DDX20 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR446LAV] [Life stage: Adult] [TF ChIP-seq peaks]
DDX20 • MCF-7 NGENCKHDTFIDPI • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq MCF-7 TF Show metadata Download track Track metadata identifier NGENCKHDTFIDPI data_source ENCODE Download track Download number_of_intervals 848 bp_covered 195,897 output_type IDR thresholded peaks genome_build hg38 cell_type MCF-7 biosample_type Cell line biosample_term_id EFO:0001203 tissue_category Breast encode_experiment_id ENCSR330ADN biological_replicate 1 technical_replicate 1_1 antibody DDX20 assay TF ChIP-seq file_format bed narrowPeak file_size 17,193 downloaded_date 06/12/2022 release_date 02/04/2021 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF155ECR.bed.gz processed_file_md5 0b83d8d27807617d6d937e71bdda4c87 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF155ECR.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF155ECR.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF155ECR/@@download/ENCFF155ECR.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF155ECR.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 bfc35ca569b2bda3830bea10694eaf5a data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens MCF-7;Lab=Michael Snyder, Stanford;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,ENCYCLOPEDIAv2,RegulomeDB_2_1,RegulomeDB_2_2;Life_stage_age=adult 69 years;Reference=NR;External_resources=GEO:GSE105517;Project=ENCODE;Award=U54HG006996;Experiment_date_released=2017-06-29,2016-09-20;Submitted_track_name=rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=MCF-7;ENCODE_cell_slims=epithelial cell,cancer cell;ENCODE_system_slims=integumental system,exocrine system;ENCODE_biosample_term_synonyms=MCF7 cell,MCF7,MCF-7 cell;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001203;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name ENCODE MCF-7 (repl. 1) TF ChIP-seq DDX20 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR330ADN] [Life stage: Adult] [TF ChIP-seq peaks]
DDX20 • MCF-7 NGENCR4B5QVTYA • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq MCF-7 TF Show metadata Download track Track metadata identifier NGENCR4B5QVTYA data_source ENCODE Download track Download number_of_intervals 2,122 bp_covered 480,494 output_type IDR thresholded peaks genome_build hg38 cell_type MCF-7 biosample_type Cell line biosample_term_id EFO:0001203 tissue_category Breast encode_experiment_id ENCSR330ADN biological_replicate 2 technical_replicate 2_1 antibody DDX20 assay TF ChIP-seq file_format bed narrowPeak file_size 42,055 downloaded_date 06/12/2022 release_date 02/04/2021 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF326VOC.bed.gz processed_file_md5 c393ac231f3f277da24d49caf11584a9 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF326VOC.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF326VOC.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF326VOC/@@download/ENCFF326VOC.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF326VOC.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 f960a3d41b5ab24bbc96e74db2862c5f data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens MCF-7;Lab=Michael Snyder, Stanford;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,ENCYCLOPEDIAv2,RegulomeDB_2_1,RegulomeDB_2_2;Life_stage_age=adult 69 years;Reference=NR;External_resources=GEO:GSE105517;Project=ENCODE;Award=U54HG006996;Experiment_date_released=2017-06-29,2016-09-20;Submitted_track_name=rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=MCF-7;ENCODE_cell_slims=epithelial cell,cancer cell;ENCODE_system_slims=integumental system,exocrine system;ENCODE_biosample_term_synonyms=MCF7 cell,MCF7,MCF-7 cell;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001203;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name ENCODE MCF-7 (repl. 2) TF ChIP-seq DDX20 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR330ADN] [Life stage: Adult] [TF ChIP-seq peaks]
DDX20 • K562 NGENCRV4S2EYON • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq K562 TF Show metadata Download track Track metadata identifier NGENCRV4S2EYON data_source ENCODE Download track Download number_of_intervals 6,766 bp_covered 2,867,321 output_type IDR thresholded peaks genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR446LAV biological_replicate 1 technical_replicate 1_1 antibody DDX20 assay TF ChIP-seq file_format bed narrowPeak file_size 133,479 downloaded_date 06/12/2022 release_date 12/08/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF077LLT.bed.gz processed_file_md5 42f4c13067d5521a9bdff7dc8df6ced2 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF077LLT.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF077LLT.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF077LLT/@@download/ENCFF077LLT.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF077LLT.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 f69adc5439f7c690be9b93de64c263c3 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens K562;Lab=Michael Snyder, Stanford;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,ENCYCLOPEDIAv2,RegulomeDB_2_1,RegulomeDB_2_2;Life_stage_age=adult 53 years;Reference=PMID:32728046;External_resources=GEO:GSE91767;Project=ENCODE;Award=U54HG006996;Experiment_date_released=2016-04-22,2014-07-07;Submitted_track_name=rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=hematopoietic cell,cancer cell,leukocyte;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=K-562, K562 cell,K-562 cell;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name ENCODE K562 (repl. 1) TF ChIP-seq DDX20 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR446LAV] [Life stage: Adult] [TF ChIP-seq peaks]
DDX20 • K562 NGENCVV4ICQAVJ • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq K562 TF Show metadata Download track Track metadata identifier NGENCVV4ICQAVJ data_source ENCODE Download track Download number_of_intervals 9,274 bp_covered 3,891,448 output_type IDR thresholded peaks genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR446LAV biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody DDX20 assay TF ChIP-seq file_format bed narrowPeak file_size 185,939 downloaded_date 06/12/2022 release_date 12/08/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF205RDN.bed.gz processed_file_md5 28f2a63d0bc2abbcee468e715335ad7c wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF205RDN.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF205RDN.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF205RDN/@@download/ENCFF205RDN.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF205RDN.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 54ade9d71b1a53096a52ca994d73054f data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens K562;Lab=Michael Snyder, Stanford;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,ENCYCLOPEDIAv2,RegulomeDB_2_1,RegulomeDB_2_2;Life_stage_age=adult 53 years;Reference=PMID:32728046;External_resources=GEO:GSE91767;Project=ENCODE;Award=U54HG006996;Experiment_date_released=2016-04-22,2014-07-07;Submitted_track_name=pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=hematopoietic cell,cancer cell,leukocyte;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=K-562, K562 cell,K-562 cell;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name ENCODE K562 (repl. 1, 2) TF ChIP-seq DDX20 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR446LAV] [Life stage: Adult] [TF ChIP-seq peaks]
DDX20 • K562 NGFTB23QPESN62 • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTB23QPESN62 data_source Factorbook Download track Download number_of_intervals 1,351 bp_covered 31,073 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR446LAV biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody DDX20 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 27,239 downloaded_date 07/10/2024 release_date 04/22/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF746TUQ_TATTCATGAGTTTTCYRGGAAAG_sorted.bed.gz processed_file_md5 e586c07caf2468804927d3269560760c wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF746TUQ_TATTCATGAGTTTTCYRGGAAAG_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF746TUQ_TATTCATGAGTTTTCYRGGAAAG_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF746TUQ_TATTCATGAGTTTTCYRGGAAAG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF746TUQ_TATTCATGAGTTTTCYRGGAAAG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 69c0a6518b28523cae73db5a2fd04a6f data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF746TUQ;ENCODE_bigBed_id=ENCFF205RDN;PMID=34755879;Motif_sequence=TATTCATGAGTTTTCYRGGAAAG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding DDX20 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR446LAV] [Life stage: Adult] [TFBS]
DDX20 • K562 NGFTB3WSVSYYNK • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTB3WSVSYYNK data_source Factorbook Download track Download number_of_intervals 1,597 bp_covered 41,522 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR446LAV biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody DDX20 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 34,747 downloaded_date 07/10/2024 release_date 04/22/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF746TUQ_GGTGGGCAATTCCCRGAACTGAGGGT_sorted.bed.gz processed_file_md5 3f07fb67237501d5203b6fa01261fba5 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF746TUQ_GGTGGGCAATTCCCRGAACTGAGGGT_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF746TUQ_GGTGGGCAATTCCCRGAACTGAGGGT_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF746TUQ_GGTGGGCAATTCCCRGAACTGAGGGT.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF746TUQ_GGTGGGCAATTCCCRGAACTGAGGGT.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 e133f3ccf9e5890b30201ba285d19b9b data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF746TUQ;ENCODE_bigBed_id=ENCFF205RDN;PMID=34755879;Motif_sequence=GGTGGGCAATTCCCRGAACTGAGGGT;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding DDX20 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR446LAV] [Life stage: Adult] [TFBS]
DDX20 • K562 NGFTB3ZLBAZ6RS • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTB3ZLBAZ6RS data_source Factorbook Download track Download number_of_intervals 335 bp_covered 8,710 output_type transcription factor binding sites significant genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR446LAV biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody DDX20 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 5,939 downloaded_date 07/10/2024 release_date 04/22/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF746TUQ_GGTGGGCAATTCCCRGAACTGAGGGT_filtered.bed.gz processed_file_md5 2e8c5f0a604e518e1c8111d803a1afe3 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF746TUQ_GGTGGGCAATTCCCRGAACTGAGGGT_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF746TUQ_GGTGGGCAATTCCCRGAACTGAGGGT_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF746TUQ_GGTGGGCAATTCCCRGAACTGAGGGT.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF746TUQ_GGTGGGCAATTCCCRGAACTGAGGGT.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 e133f3ccf9e5890b30201ba285d19b9b data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF746TUQ;ENCODE_bigBed_id=ENCFF205RDN;PMID=34755879;Motif_sequence=GGTGGGCAATTCCCRGAACTGAGGGT;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding DDX20 transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR446LAV] [Life stage: Adult] [TFBS]
DDX20 • K562 NGFTB4Q443RJH4 • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTB4Q443RJH4 data_source Factorbook Download track Download number_of_intervals 299 bp_covered 4,784 output_type transcription factor binding sites significant genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR382AIB biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody DDX20 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 3,886 downloaded_date 07/10/2024 release_date 02/16/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF748EAO_GAGGCRTTTGAACCAG_filtered.bed.gz processed_file_md5 ce98d761c70d5e52ae53a15bce9317d9 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF748EAO_GAGGCRTTTGAACCAG_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF748EAO_GAGGCRTTTGAACCAG_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF748EAO_GAGGCRTTTGAACCAG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF748EAO_GAGGCRTTTGAACCAG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 8d4ebd9a632ec8cec5d4d0ac3c14d8b6 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562 stably expressing DDX20;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF748EAO;ENCODE_bigBed_id=ENCFF373BEC;PMID=34755879;Motif_sequence=GAGGCRTTTGAACCAG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding DDX20 transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR382AIB] [Life stage: Adult] [TFBS]
DDX20 • MCF-7 NGFTB4YHRXIOKV • Factorbook34755879 Motif finding MCF-7 TFBS Show metadata Download track Track metadata identifier NGFTB4YHRXIOKV data_source Factorbook Download track Download number_of_intervals 1,596 bp_covered 17,556 output_type transcription factor binding sites all genome_build hg38 cell_type MCF-7 biosample_type Cell line biosample_term_id EFO:0001203 tissue_category Breast encode_experiment_id ENCSR330ADN biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody DDX20 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 23,756 downloaded_date 07/10/2024 release_date 06/29/2017 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF565XMS_RCCAATSRGAR_sorted.bed.gz processed_file_md5 da31d9995cbb93be6cd092d30228cc70 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF565XMS_RCCAATSRGAR_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF565XMS_RCCAATSRGAR_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF565XMS_RCCAATSRGAR.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF565XMS_RCCAATSRGAR.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 0372497525be7ca1d06283f27cd214f4 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens MCF-7;Original_cell_type=MCF-7;Lab=Michael Snyder, Stanford;System=exocrine system,integumental system;ENCODE_BED_id=ENCFF565XMS;ENCODE_bigBed_id=ENCFF142TOQ;PMID=34755879;Motif_sequence=RCCAATSRGAR;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001203;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook MCF-7 (repl. 1, 2) Motif finding DDX20 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR330ADN] [Life stage: Adult] [TFBS]
DDX20 • MCF-7 NGFTB64VUIAGWI • Factorbook34755879 Motif finding MCF-7 TFBS Show metadata Download track Track metadata identifier NGFTB64VUIAGWI data_source Factorbook Download track Download number_of_intervals 565 bp_covered 5,650 output_type transcription factor binding sites all genome_build hg38 cell_type MCF-7 biosample_type Cell line biosample_term_id EFO:0001203 tissue_category Breast encode_experiment_id ENCSR330ADN biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody DDX20 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 8,108 downloaded_date 07/10/2024 release_date 06/29/2017 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF565XMS_TGAKKGACAG_sorted.bed.gz processed_file_md5 be58f527433d252981080362e3ec8412 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF565XMS_TGAKKGACAG_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF565XMS_TGAKKGACAG_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF565XMS_TGAKKGACAG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF565XMS_TGAKKGACAG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 1b6a0b4d27643148c01636e1b33059db data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens MCF-7;Original_cell_type=MCF-7;Lab=Michael Snyder, Stanford;System=exocrine system,integumental system;ENCODE_BED_id=ENCFF565XMS;ENCODE_bigBed_id=ENCFF142TOQ;PMID=34755879;Motif_sequence=TGAKKGACAG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001203;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook MCF-7 (repl. 1, 2) Motif finding DDX20 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR330ADN] [Life stage: Adult] [TFBS]
DDX20 • K562 NGFTBCUCZID3FG • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBCUCZID3FG data_source Factorbook Download track Download number_of_intervals 857 bp_covered 12,855 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR382AIB biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody DDX20 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 14,288 downloaded_date 07/10/2024 release_date 02/16/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF748EAO_GCCCAGTAGGTCTCA_sorted.bed.gz processed_file_md5 ffe3d2015f25ab56c698e8f17fa2aeff wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF748EAO_GCCCAGTAGGTCTCA_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF748EAO_GCCCAGTAGGTCTCA_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF748EAO_GCCCAGTAGGTCTCA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF748EAO_GCCCAGTAGGTCTCA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 9872dcba1012411db2534f4e1f052646 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562 stably expressing DDX20;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF748EAO;ENCODE_bigBed_id=ENCFF373BEC;PMID=34755879;Motif_sequence=GCCCAGTAGGTCTCA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding DDX20 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR382AIB] [Life stage: Adult] [TFBS]
DDX20 • K562 NGFTBGYUVMBXRU • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBGYUVMBXRU data_source Factorbook Download track Download number_of_intervals 11,936 bp_covered 131,296 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR446LAV biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody DDX20 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 152,374 downloaded_date 07/10/2024 release_date 04/22/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF746TUQ_RARGRGGCGGG_sorted.bed.gz processed_file_md5 ff45ab19ed8df67eebf9ce26da558849 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF746TUQ_RARGRGGCGGG_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF746TUQ_RARGRGGCGGG_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF746TUQ_RARGRGGCGGG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF746TUQ_RARGRGGCGGG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 a8884933d9f5a7a737ab2bbdebdf4df4 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF746TUQ;ENCODE_bigBed_id=ENCFF205RDN;PMID=34755879;Motif_sequence=RARGRGGCGGG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding DDX20 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR446LAV] [Life stage: Adult] [TFBS]
DDX20 • K562 NGFTBI3V5VQD2M • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBI3V5VQD2M data_source Factorbook Download track Download number_of_intervals 899 bp_covered 14,384 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR382AIB biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody DDX20 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 15,558 downloaded_date 07/10/2024 release_date 02/16/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF748EAO_GAGGCRTTTGAACCAG_sorted.bed.gz processed_file_md5 838fb380049bc97db03440660832e606 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF748EAO_GAGGCRTTTGAACCAG_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF748EAO_GAGGCRTTTGAACCAG_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF748EAO_GAGGCRTTTGAACCAG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF748EAO_GAGGCRTTTGAACCAG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 8d4ebd9a632ec8cec5d4d0ac3c14d8b6 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562 stably expressing DDX20;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF748EAO;ENCODE_bigBed_id=ENCFF373BEC;PMID=34755879;Motif_sequence=GAGGCRTTTGAACCAG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding DDX20 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR382AIB] [Life stage: Adult] [TFBS]
DDX20 • K562 NGFTBI4VAYNYVZ • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBI4VAYNYVZ data_source Factorbook Download track Download number_of_intervals 344 bp_covered 7,912 output_type transcription factor binding sites significant genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR446LAV biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody DDX20 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 5,299 downloaded_date 07/10/2024 release_date 04/22/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF746TUQ_TATTCATGAGTTTTCYRGGAAAG_filtered.bed.gz processed_file_md5 c00f55f39d959108471d849ed4320844 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF746TUQ_TATTCATGAGTTTTCYRGGAAAG_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF746TUQ_TATTCATGAGTTTTCYRGGAAAG_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF746TUQ_TATTCATGAGTTTTCYRGGAAAG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF746TUQ_TATTCATGAGTTTTCYRGGAAAG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 69c0a6518b28523cae73db5a2fd04a6f data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF746TUQ;ENCODE_bigBed_id=ENCFF205RDN;PMID=34755879;Motif_sequence=TATTCATGAGTTTTCYRGGAAAG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding DDX20 transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR446LAV] [Life stage: Adult] [TFBS]
DDX20 • K562 NGFTBMWQ7W2DUY • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBMWQ7W2DUY data_source Factorbook Download track Download number_of_intervals 260 bp_covered 3,900 output_type transcription factor binding sites significant genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR382AIB biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody DDX20 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 3,004 downloaded_date 07/10/2024 release_date 02/16/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF748EAO_GCCCAGTAGGTCTCA_filtered.bed.gz processed_file_md5 a8c5b9cb485a35ecd2f5feb648a71a7c wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF748EAO_GCCCAGTAGGTCTCA_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF748EAO_GCCCAGTAGGTCTCA_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF748EAO_GCCCAGTAGGTCTCA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF748EAO_GCCCAGTAGGTCTCA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 9872dcba1012411db2534f4e1f052646 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562 stably expressing DDX20;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF748EAO;ENCODE_bigBed_id=ENCFF373BEC;PMID=34755879;Motif_sequence=GCCCAGTAGGTCTCA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding DDX20 transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR382AIB] [Life stage: Adult] [TFBS]
DDX20 • K562 NGFTBPKKOCCPIX • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBPKKOCCPIX data_source Factorbook Download track Download number_of_intervals 1,097 bp_covered 23,037 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR382AIB biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody DDX20 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 21,378 downloaded_date 07/10/2024 release_date 02/16/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF748EAO_GACAGTRARAGAGATCTGACY_sorted.bed.gz processed_file_md5 b3ba8d0073416cb7abc87dac296d3ac6 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF748EAO_GACAGTRARAGAGATCTGACY_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF748EAO_GACAGTRARAGAGATCTGACY_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF748EAO_GACAGTRARAGAGATCTGACY.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF748EAO_GACAGTRARAGAGATCTGACY.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 2e3bce6b59d7cdbf1118c7483d38e7fc data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562 stably expressing DDX20;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF748EAO;ENCODE_bigBed_id=ENCFF373BEC;PMID=34755879;Motif_sequence=GACAGTRARAGAGATCTGACY;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding DDX20 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR382AIB] [Life stage: Adult] [TFBS]