E2F6 • K562 NGENCKPMEIXYAB • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq K562 TF Show metadata Download track Track metadata identifier NGENCKPMEIXYAB data_source ENCODE Download track Download number_of_intervals 28,735 bp_covered 8,259,555 output_type IDR thresholded peaks genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR000BLI biological_replicate 2 technical_replicate 2_1 antibody E2F6 assay TF ChIP-seq file_format bed narrowPeak file_size 534,022 downloaded_date 06/12/2022 release_date 12/26/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF706ZYH.bed.gz processed_file_md5 e67d393d3eda52f6eb2b5b1789c6477c wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF706ZYH.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF706ZYH.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF706ZYH/@@download/ENCFF706ZYH.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF706ZYH.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 f7d099ebc102de3e1ee26519142807f4 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens K562;Lab=Richard Myers, HAIB;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=adult 53 years;Reference=PMID:32728046;External_resources=FactorBook:ENCSR000BLI,UCSC-ENCODE-hg19:wgEncodeEH001598,GEO:GSM803469;Project=ENCODE;Award=U54HG004576;Experiment_date_released=2011-07-18;Submitted_track_name=rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=hematopoietic cell,leukocyte,cancer cell;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=K562 cell,K-562 cell,K-562;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name ENCODE K562 (repl. 2) TF ChIP-seq E2F6 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000BLI] [Life stage: Adult] [TF ChIP-seq peaks]
E2F6 • K562 NGENCLQX6DTXK7 • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq K562 TF Show metadata Download track Track metadata identifier NGENCLQX6DTXK7 data_source ENCODE Download track Download number_of_intervals 5,612 bp_covered 1,292,941 output_type IDR thresholded peaks genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR000BLI biological_replicate 1 technical_replicate 1_1 antibody E2F6 assay TF ChIP-seq file_format bed narrowPeak file_size 96,927 downloaded_date 06/12/2022 release_date 12/26/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF929LWI.bed.gz processed_file_md5 6d6a6bbdb2299373d167f33de46374f3 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF929LWI.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF929LWI.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF929LWI/@@download/ENCFF929LWI.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF929LWI.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 cdb413e3ffa99da038b1c1bc679d60e0 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens K562;Lab=Richard Myers, HAIB;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=adult 53 years;Reference=PMID:32728046;External_resources=FactorBook:ENCSR000BLI,UCSC-ENCODE-hg19:wgEncodeEH001598,GEO:GSM803469;Project=ENCODE;Award=U54HG004576;Experiment_date_released=2011-07-18;Submitted_track_name=rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=hematopoietic cell,leukocyte,cancer cell;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=K562 cell,K-562 cell,K-562;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name ENCODE K562 (repl. 1) TF ChIP-seq E2F6 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000BLI] [Life stage: Adult] [TF ChIP-seq peaks]
E2F6 • HeLa-S3 NGENCMW22XJJVP • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq HeLa-S3 TF Show metadata Download track Track metadata identifier NGENCMW22XJJVP data_source ENCODE Download track Download number_of_intervals 6,649 bp_covered 3,189,523 output_type IDR thresholded peaks genome_build hg38 cell_type HeLa-S3 biosample_type Cell line biosample_term_id EFO:0002791 tissue_category Female Reproductive encode_experiment_id ENCSR000EVK biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody E2F6 assay TF ChIP-seq file_format bed narrowPeak file_size 126,899 downloaded_date 06/12/2022 release_date 12/11/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF766OCY.bed.gz processed_file_md5 62dc2850c4f1f7bd71eafedb0ae33530 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF766OCY.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF766OCY.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF766OCY/@@download/ENCFF766OCY.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF766OCY.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 69663be0f38f557c7245d2f3b719555f data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens HeLa-S3;Lab=Peggy Farnham, USC;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=adult 31 years;Reference=PMID:32728046;External_resources=FactorBook:ENCSR000EVK,UCSC-ENCODE-hg19:wgEncodeEH000692,GEO:GSM935476;Project=ENCODE;Award=U54HG004558;Experiment_date_released=2011-10-29;Submitted_track_name=pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=HeLa-S3;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_system_slims=reproductive system;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002791;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name ENCODE HeLa-S3 (repl. 1, 2) TF ChIP-seq E2F6 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000EVK] [Life stage: Adult] [TF ChIP-seq peaks]
E2F6 • HeLa-S3 NGENCMY6WR7LH4 • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq HeLa-S3 TF Show metadata Download track Track metadata identifier NGENCMY6WR7LH4 data_source ENCODE Download track Download number_of_intervals 1,630 bp_covered 677,336 output_type IDR thresholded peaks genome_build hg38 cell_type HeLa-S3 biosample_type Cell line biosample_term_id EFO:0002791 tissue_category Female Reproductive encode_experiment_id ENCSR000EVK biological_replicate 1 technical_replicate 1_1 antibody E2F6 assay TF ChIP-seq file_format bed narrowPeak file_size 28,974 downloaded_date 06/12/2022 release_date 12/11/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF284CWG.bed.gz processed_file_md5 a79028969207ee658b371533f84b1563 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF284CWG.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF284CWG.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF284CWG/@@download/ENCFF284CWG.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF284CWG.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 9b87af02ae2b0b108545b96b122a5f15 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens HeLa-S3;Lab=Peggy Farnham, USC;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=adult 31 years;Reference=PMID:32728046;External_resources=FactorBook:ENCSR000EVK,UCSC-ENCODE-hg19:wgEncodeEH000692,GEO:GSM935476;Project=ENCODE;Award=U54HG004558;Experiment_date_released=2011-10-29;Submitted_track_name=rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=HeLa-S3;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_system_slims=reproductive system;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002791;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name ENCODE HeLa-S3 (repl. 1) TF ChIP-seq E2F6 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000EVK] [Life stage: Adult] [TF ChIP-seq peaks]
E2F6 • K562 NGENCNBACH5E5T • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq K562 TF Show metadata Download track Track metadata identifier NGENCNBACH5E5T data_source ENCODE Download track Download number_of_intervals 20,104 bp_covered 5,726,535 output_type conservative IDR thresholded peaks genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR000BLI biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody E2F6 assay TF ChIP-seq file_format bed narrowPeak file_size 361,327 downloaded_date 06/12/2022 release_date 12/26/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF085UDV.bed.gz processed_file_md5 91fbb88f7d182817edf3923b328c61df wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF085UDV.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF085UDV.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF085UDV/@@download/ENCFF085UDV.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF085UDV.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 eb714faf53cf66999d3f89fa54317c96 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq conservative IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens K562;Lab=Richard Myers, HAIB;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=adult 53 years;Reference=PMID:32728046;External_resources=FactorBook:ENCSR000BLI,UCSC-ENCODE-hg19:wgEncodeEH001598,GEO:GSM803469;Project=ENCODE;Award=U54HG004576;Experiment_date_released=2011-07-18;Submitted_track_name=rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=hematopoietic cell,leukocyte,cancer cell;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=K562 cell,K-562 cell,K-562;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name ENCODE K562 (repl. 1, 2) TF ChIP-seq E2F6 conservative IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000BLI] [Life stage: Adult] [TF ChIP-seq peaks]
E2F6 • H1-hESC NGENCPBCGA5NNM • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq H1-hESC TF Show metadata Download track Track metadata identifier NGENCPBCGA5NNM data_source ENCODE Download track Download number_of_intervals 31,311 bp_covered 12,454,352 output_type IDR thresholded peaks genome_build hg38 cell_type H1-hESC biosample_type Stem cell biosample_term_id EFO:0003042 tissue_category Embryo encode_experiment_id ENCSR000BSI biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody E2F6 assay TF ChIP-seq file_format bed narrowPeak file_size 548,143 downloaded_date 06/12/2022 release_date 12/27/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF785DWK.bed.gz processed_file_md5 07efe942c4461d8a3b133d4b666cf42a wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF785DWK.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF785DWK.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF785DWK/@@download/ENCFF785DWK.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF785DWK.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 b60008c1cd9c3f4589665282b6c858e0 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens H1;Lab=Richard Myers, HAIB;ENCODE_internal_tags=ENCYCLOPEDIAv1,RegulomeDB_2_2,ENCYCLOPEDIAv2,RegulomeDB_2_1;Life_stage_age=NR;Reference=PMID:32737473;External_resources=GEO:GSM1010899,FactorBook:ENCSR000BSI,UCSC-ENCODE-hg19:wgEncodeEH003224;Project=ENCODE;Award=U54HG004576;Experiment_date_released=2012-09-10,2012-02-29;Submitted_track_name=pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=H1;ENCODE_cell_slims=embryonic cell,stem cell;ENCODE_system_slims=NR;ENCODE_biosample_term_synonyms=H1;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0003042;is_hg38_lifted=no system_category Embryo life_stage Embryonic track_name ENCODE H1-hESC (repl. 1, 2) TF ChIP-seq E2F6 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000BSI] [Life stage: Embryonic] [TF ChIP-seq peaks]
E2F6 • H1-hESC NGENCQ6JTA35ZF • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq H1-hESC TF Show metadata Download track Track metadata identifier NGENCQ6JTA35ZF data_source ENCODE Download track Download number_of_intervals 18,274 bp_covered 5,393,349 output_type IDR thresholded peaks genome_build hg38 cell_type H1-hESC biosample_type Stem cell biosample_term_id EFO:0003042 tissue_category Embryo encode_experiment_id ENCSR000BSI biological_replicate 1 technical_replicate 1_1 antibody E2F6 assay TF ChIP-seq file_format bed narrowPeak file_size 328,716 downloaded_date 06/12/2022 release_date 12/27/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF232JIG.bed.gz processed_file_md5 09eb210ad00415b96a560524c6ab7007 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF232JIG.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF232JIG.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF232JIG/@@download/ENCFF232JIG.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF232JIG.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 0efeb7da19aa03ea1134b907d8880089 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens H1;Lab=Richard Myers, HAIB;ENCODE_internal_tags=ENCYCLOPEDIAv1,RegulomeDB_2_2,ENCYCLOPEDIAv2,RegulomeDB_2_1;Life_stage_age=NR;Reference=PMID:32737473;External_resources=GEO:GSM1010899,FactorBook:ENCSR000BSI,UCSC-ENCODE-hg19:wgEncodeEH003224;Project=ENCODE;Award=U54HG004576;Experiment_date_released=2012-09-10,2012-02-29;Submitted_track_name=rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=H1;ENCODE_cell_slims=embryonic cell,stem cell;ENCODE_system_slims=NR;ENCODE_biosample_term_synonyms=H1;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0003042;is_hg38_lifted=no system_category Embryo life_stage Embryonic track_name ENCODE H1-hESC (repl. 1) TF ChIP-seq E2F6 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000BSI] [Life stage: Embryonic] [TF ChIP-seq peaks]
E2F6 • H1-hESC NGENCQV2TH6TEC • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq H1-hESC TF Show metadata Download track Track metadata identifier NGENCQV2TH6TEC data_source ENCODE Download track Download number_of_intervals 27,616 bp_covered 12,921,449 output_type IDR thresholded peaks genome_build hg38 cell_type H1-hESC biosample_type Stem cell biosample_term_id EFO:0003042 tissue_category Embryo encode_experiment_id ENCSR000BSI biological_replicate 2 technical_replicate 2_1 antibody E2F6 assay TF ChIP-seq file_format bed narrowPeak file_size 485,653 downloaded_date 06/12/2022 release_date 12/27/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF158DTD.bed.gz processed_file_md5 3e76c7a1c49742a37b098526bd105346 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF158DTD.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF158DTD.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF158DTD/@@download/ENCFF158DTD.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF158DTD.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 5ffdfc3d2456280a68997f26363db117 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens H1;Lab=Richard Myers, HAIB;ENCODE_internal_tags=ENCYCLOPEDIAv1,RegulomeDB_2_2,ENCYCLOPEDIAv2,RegulomeDB_2_1;Life_stage_age=NR;Reference=PMID:32737473;External_resources=GEO:GSM1010899,FactorBook:ENCSR000BSI,UCSC-ENCODE-hg19:wgEncodeEH003224;Project=ENCODE;Award=U54HG004576;Experiment_date_released=2012-09-10,2012-02-29;Submitted_track_name=rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=H1;ENCODE_cell_slims=embryonic cell,stem cell;ENCODE_system_slims=NR;ENCODE_biosample_term_synonyms=H1;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0003042;is_hg38_lifted=no system_category Embryo life_stage Embryonic track_name ENCODE H1-hESC (repl. 2) TF ChIP-seq E2F6 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000BSI] [Life stage: Embryonic] [TF ChIP-seq peaks]
E2F6 • A549 NGENCWDOFQ2NZA • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq A549 TF Show metadata Download track Track metadata identifier NGENCWDOFQ2NZA data_source ENCODE Download track Download number_of_intervals 18,252 bp_covered 8,081,468 output_type IDR thresholded peaks genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR000BTC biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody E2F6 assay TF ChIP-seq file_format bed narrowPeak file_size 353,169 downloaded_date 06/12/2022 release_date 12/27/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF550XVR.bed.gz processed_file_md5 eeeb3d5ebf101d5ace83c40bf48753d6 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF550XVR.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF550XVR.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF550XVR/@@download/ENCFF550XVR.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF550XVR.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 947fa14951cccb07b02bec1fbd92c52b data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens A549;Lab=Richard Myers, HAIB;ENCODE_internal_tags=ENCYCLOPEDIAv1,RegulomeDB_2_2,ENCYCLOPEDIAv2,RegulomeDB_2_1;Life_stage_age=adult 58 years;Reference=NR;External_resources=GEO:GSM1010766,FactorBook:ENCSR000BTC,UCSC-ENCODE-hg19:wgEncodeEH003244;Project=ENCODE;Award=U54HG004576;Experiment_date_released=2012-09-10;Submitted_track_name=pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=A549;ENCODE_cell_slims=cancer cell;ENCODE_system_slims=respiratory system;ENCODE_biosample_term_synonyms=A-549,A549 cell;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name ENCODE A549 (repl. 1, 2) TF ChIP-seq E2F6 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000BTC] [Life stage: Adult] [TF ChIP-seq peaks]
E2F6 • A549 NGENCY7NWSZIGQ • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq A549 TF Show metadata Download track Track metadata identifier NGENCY7NWSZIGQ data_source ENCODE Download track Download number_of_intervals 16,452 bp_covered 8,088,927 output_type IDR thresholded peaks genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR000BTC biological_replicate 1 technical_replicate 1_1 antibody E2F6 assay TF ChIP-seq file_format bed narrowPeak file_size 304,643 downloaded_date 06/12/2022 release_date 12/27/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF246XEG.bed.gz processed_file_md5 5ecc90837fff962347aa373b14177900 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF246XEG.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF246XEG.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF246XEG/@@download/ENCFF246XEG.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF246XEG.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 424105073b12c52ca1609b2850934596 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens A549;Lab=Richard Myers, HAIB;ENCODE_internal_tags=ENCYCLOPEDIAv1,RegulomeDB_2_2,ENCYCLOPEDIAv2,RegulomeDB_2_1;Life_stage_age=adult 58 years;Reference=NR;External_resources=GEO:GSM1010766,FactorBook:ENCSR000BTC,UCSC-ENCODE-hg19:wgEncodeEH003244;Project=ENCODE;Award=U54HG004576;Experiment_date_released=2012-09-10;Submitted_track_name=rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=A549;ENCODE_cell_slims=cancer cell;ENCODE_system_slims=respiratory system;ENCODE_biosample_term_synonyms=A-549,A549 cell;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name ENCODE A549 (repl. 1) TF ChIP-seq E2F6 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000BTC] [Life stage: Adult] [TF ChIP-seq peaks]
E2F6 • K562 NGENCYEQMZAI7M • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq K562 TF Show metadata Download track Track metadata identifier NGENCYEQMZAI7M data_source ENCODE Download track Download number_of_intervals 8,444 bp_covered 3,117,002 output_type IDR thresholded peaks genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR000EWJ biological_replicate 2 technical_replicate 2_1 antibody E2F6 assay TF ChIP-seq file_format bed narrowPeak file_size 147,626 downloaded_date 06/12/2022 release_date 12/26/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF743NVN.bed.gz processed_file_md5 7ddcfc9633e8f0d011cd1117c05dc93a wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF743NVN.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF743NVN.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF743NVN/@@download/ENCFF743NVN.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF743NVN.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 b13557a227b435438c847bb190a7ef67 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens K562;Lab=Peggy Farnham, USC;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=adult 53 years;Reference=PMID:32728046;External_resources=FactorBook:ENCSR000EWJ,UCSC-ENCODE-hg19:wgEncodeEH000676,GEO:GSM935597;Project=ENCODE;Award=U54HG004558;Experiment_date_released=2011-10-29,2011-10-07;Submitted_track_name=rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=hematopoietic cell,leukocyte,cancer cell;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=K562 cell,K-562 cell,K-562;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name ENCODE K562 (repl. 2) TF ChIP-seq E2F6 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000EWJ] [Life stage: Adult] [TF ChIP-seq peaks]
E2F6 • A549 NGFTB4CRTFQDU5 • Factorbook34755879 Motif finding A549 TFBS Show metadata Download track Track metadata identifier NGFTB4CRTFQDU5 data_source Factorbook Download track Download number_of_intervals 15,232 bp_covered 167,552 output_type transcription factor binding sites all genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR000BTC biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody E2F6 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 201,166 downloaded_date 07/10/2024 release_date 09/10/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF786NAO_YTTCCCGCCYN_sorted.bed.gz processed_file_md5 9934cfe9280eda14041b20b387a4ee8a wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF786NAO_YTTCCCGCCYN_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF786NAO_YTTCCCGCCYN_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF786NAO_YTTCCCGCCYN.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF786NAO_YTTCCCGCCYN.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 05a1d7fc2af246971b633676da02f2cd data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens A549;Original_cell_type=A549;Lab=Richard Myers, HAIB;System=respiratory system;ENCODE_BED_id=ENCFF786NAO;ENCODE_bigBed_id=ENCFF550XVR;PMID=34755879;Motif_sequence=YTTCCCGCCYN;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name Factorbook A549 (repl. 1, 2) Motif finding E2F6 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BTC] [Life stage: Adult] [TFBS]
E2F6 • K562 NGFTB4TNGZW2SS • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTB4TNGZW2SS data_source Factorbook Download track Download number_of_intervals 12,862 bp_covered 141,482 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR000EWJ biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody E2F6 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 163,457 downloaded_date 07/10/2024 release_date 10/29/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF085GHX_GCGCATGCGCA_sorted.bed.gz processed_file_md5 f36c4b07ab93b7603032884a2e494db8 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF085GHX_GCGCATGCGCA_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF085GHX_GCGCATGCGCA_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF085GHX_GCGCATGCGCA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF085GHX_GCGCATGCGCA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 db9f6508580c4257a0cf3bb9b313c874 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Peggy Farnham, USC;System=immune system;ENCODE_BED_id=ENCFF085GHX;ENCODE_bigBed_id=ENCFF163WMT;PMID=34755879;Motif_sequence=GCGCATGCGCA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding E2F6 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000EWJ] [Life stage: Adult] [TFBS]
E2F6 • H1-hESC NGFTBAOSGM6NL2 • Factorbook34755879 Motif finding H1-hESC TFBS Show metadata Download track Track metadata identifier NGFTBAOSGM6NL2 data_source Factorbook Download track Download number_of_intervals 6,144 bp_covered 67,584 output_type transcription factor binding sites all genome_build hg38 cell_type H1-hESC biosample_type Cell line biosample_term_id EFO:0003042 tissue_category Embryo encode_experiment_id ENCSR000BSI biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody E2F6 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 84,423 downloaded_date 07/10/2024 release_date 09/10/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF174AVU_CTGATTGGCTG_sorted.bed.gz processed_file_md5 1c8175ad8b3889a8b72cad7ca247bb23 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF174AVU_CTGATTGGCTG_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF174AVU_CTGATTGGCTG_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF174AVU_CTGATTGGCTG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF174AVU_CTGATTGGCTG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 5f6030ef45176586d8c4c13a1c871113 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens H1;Original_cell_type=H1;Lab=Richard Myers, HAIB;System=NR;ENCODE_BED_id=ENCFF174AVU;ENCODE_bigBed_id=ENCFF785DWK;PMID=34755879;Motif_sequence=CTGATTGGCTG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0003042;is_hg38_lifted=no system_category Embryo life_stage Unknown track_name Factorbook H1-hESC (repl. 1, 2) Motif finding E2F6 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BSI] [TFBS]
E2F6 • A549 NGFTBBX24GQ5PM • Factorbook34755879 Motif finding A549 TFBS Show metadata Download track Track metadata identifier NGFTBBX24GQ5PM data_source Factorbook Download track Download number_of_intervals 6,043 bp_covered 60,430 output_type transcription factor binding sites all genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR000BTC biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody E2F6 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 71,138 downloaded_date 07/10/2024 release_date 09/10/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF786NAO_CCACGTGCBS_sorted.bed.gz processed_file_md5 c0d57bf9b5574b13c0bb7975956bc2cd wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF786NAO_CCACGTGCBS_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF786NAO_CCACGTGCBS_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF786NAO_CCACGTGCBS.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF786NAO_CCACGTGCBS.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 927043b84f6536c99e433556266b2f3e data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens A549;Original_cell_type=A549;Lab=Richard Myers, HAIB;System=respiratory system;ENCODE_BED_id=ENCFF786NAO;ENCODE_bigBed_id=ENCFF550XVR;PMID=34755879;Motif_sequence=CCACGTGCBS;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name Factorbook A549 (repl. 1, 2) Motif finding E2F6 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BTC] [Life stage: Adult] [TFBS]
E2F6 • K562 NGFTBBZXIGBC7R • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBBZXIGBC7R data_source Factorbook Download track Download number_of_intervals 6,600 bp_covered 132,000 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR000EWJ biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody E2F6 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 125,880 downloaded_date 07/10/2024 release_date 10/29/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF085GHX_MGSCGCVYBCTSATTGGCTG_sorted.bed.gz processed_file_md5 181ac40018fe4283be0a253a4021b310 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF085GHX_MGSCGCVYBCTSATTGGCTG_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF085GHX_MGSCGCVYBCTSATTGGCTG_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF085GHX_MGSCGCVYBCTSATTGGCTG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF085GHX_MGSCGCVYBCTSATTGGCTG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 556b14100ce35c73f3f28210c7b8aeb5 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Peggy Farnham, USC;System=immune system;ENCODE_BED_id=ENCFF085GHX;ENCODE_bigBed_id=ENCFF163WMT;PMID=34755879;Motif_sequence=MGSCGCVYBCTSATTGGCTG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding E2F6 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000EWJ] [Life stage: Adult] [TFBS]
E2F6 • K562 NGFTBDKX4K3PGJ • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBDKX4K3PGJ data_source Factorbook Download track Download number_of_intervals 23,590 bp_covered 259,490 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR000BLI biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody E2F6 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 323,241 downloaded_date 07/10/2024 release_date 07/18/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF831NDQ_NGGGCGGGARV_sorted.bed.gz processed_file_md5 469eb1f8971267bc3ee4e659b4b8312b wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF831NDQ_NGGGCGGGARV_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF831NDQ_NGGGCGGGARV_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF831NDQ_NGGGCGGGARV.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF831NDQ_NGGGCGGGARV.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 153dcb2b05be35f25d34b2afb84c4a6c data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Richard Myers, HAIB;System=immune system;ENCODE_BED_id=ENCFF831NDQ;ENCODE_bigBed_id=ENCFF136LTS;PMID=34755879;Motif_sequence=NGGGCGGGARV;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding E2F6 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BLI] [Life stage: Adult] [TFBS]
E2F6 • K562 NGFTBETGAUH6KI • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBETGAUH6KI data_source Factorbook Download track Download number_of_intervals 11,558 bp_covered 127,138 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR000BLI biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody E2F6 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 152,716 downloaded_date 07/10/2024 release_date 07/18/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF831NDQ_GSCACGTGNBC_sorted.bed.gz processed_file_md5 0ccce910ee1717e05c352252adbe56a5 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF831NDQ_GSCACGTGNBC_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF831NDQ_GSCACGTGNBC_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF831NDQ_GSCACGTGNBC.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF831NDQ_GSCACGTGNBC.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 7a5a99168bb554c0bac30f14b4f2a072 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Richard Myers, HAIB;System=immune system;ENCODE_BED_id=ENCFF831NDQ;ENCODE_bigBed_id=ENCFF136LTS;PMID=34755879;Motif_sequence=GSCACGTGNBC;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding E2F6 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BLI] [Life stage: Adult] [TFBS]
E2F6 • HeLa-S3 NGFTBFW643BDD4 • Factorbook34755879 Motif finding HeLa-S3 TFBS Show metadata Download track Track metadata identifier NGFTBFW643BDD4 data_source Factorbook Download track Download number_of_intervals 26 bp_covered 780 output_type transcription factor binding sites significant genome_build hg38 cell_type HeLa-S3 biosample_type Cell line biosample_term_id EFO:0002791 tissue_category Female Reproductive encode_experiment_id ENCSR000EVK biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody E2F6 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 899 downloaded_date 07/10/2024 release_date 10/29/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF160MCO_GAGSSGGGHGKGRGGTGGRRGSRGGBGGAG_filtered.bed.gz processed_file_md5 7a7d237aa7c354bc228047c516338aff wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF160MCO_GAGSSGGGHGKGRGGTGGRRGSRGGBGGAG_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF160MCO_GAGSSGGGHGKGRGGTGGRRGSRGGBGGAG_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF160MCO_GAGSSGGGHGKGRGGTGGRRGSRGGBGGAG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF160MCO_GAGSSGGGHGKGRGGTGGRRGSRGGBGGAG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 8b971713ba5a05aebf4c23ad7937265a data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens HeLa-S3;Original_cell_type=HeLa-S3;Lab=Peggy Farnham, USC;System=reproductive system;ENCODE_BED_id=ENCFF160MCO;ENCODE_bigBed_id=ENCFF766OCY;PMID=34755879;Motif_sequence=GAGSSGGGHGKGRGGTGGRRGSRGGBGGAG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002791;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook HeLa-S3 (repl. 1, 2) Motif finding E2F6 transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR000EVK] [Life stage: Adult] [TFBS]
E2F6 • H1-hESC NGFTBHBT4I5KQX • Factorbook34755879 Motif finding H1-hESC TFBS Show metadata Download track Track metadata identifier NGFTBHBT4I5KQX data_source Factorbook Download track Download number_of_intervals 17,262 bp_covered 189,882 output_type transcription factor binding sites all genome_build hg38 cell_type H1-hESC biosample_type Cell line biosample_term_id EFO:0003042 tissue_category Embryo encode_experiment_id ENCSR000BSI biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody E2F6 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 221,714 downloaded_date 07/10/2024 release_date 09/10/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF174AVU_GCGCATGCGCA_sorted.bed.gz processed_file_md5 9dc116814bec2c332d5f543a73b18201 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF174AVU_GCGCATGCGCA_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF174AVU_GCGCATGCGCA_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF174AVU_GCGCATGCGCA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF174AVU_GCGCATGCGCA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 b1f01ce6f585b63975361c0df9fb19a1 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens H1;Original_cell_type=H1;Lab=Richard Myers, HAIB;System=NR;ENCODE_BED_id=ENCFF174AVU;ENCODE_bigBed_id=ENCFF785DWK;PMID=34755879;Motif_sequence=GCGCATGCGCA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0003042;is_hg38_lifted=no system_category Embryo life_stage Unknown track_name Factorbook H1-hESC (repl. 1, 2) Motif finding E2F6 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BSI] [TFBS]