E2F6 • K562 NGFTBLIC3SGDVY • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBLIC3SGDVY data_source Factorbook Download track Download number_of_intervals 5,315 bp_covered 79,725 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR000BLI biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody E2F6 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 88,666 downloaded_date 07/10/2024 release_date 07/18/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF831NDQ_CAGCCAATCRGMGCG_sorted.bed.gz processed_file_md5 fca19493ad5e0ad3b41b255102395a36 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF831NDQ_CAGCCAATCRGMGCG_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF831NDQ_CAGCCAATCRGMGCG_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF831NDQ_CAGCCAATCRGMGCG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF831NDQ_CAGCCAATCRGMGCG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 59b490fc3aebc42a20269cd52a804e8c data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Richard Myers, HAIB;System=immune system;ENCODE_BED_id=ENCFF831NDQ;ENCODE_bigBed_id=ENCFF136LTS;PMID=34755879;Motif_sequence=CAGCCAATCRGMGCG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding E2F6 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BLI] [Life stage: Adult] [TFBS]
E2F6 • HeLa-S3 NGFTBLII3AUIYI • Factorbook34755879 Motif finding HeLa-S3 TFBS Show metadata Download track Track metadata identifier NGFTBLII3AUIYI data_source Factorbook Download track Download number_of_intervals 7,048 bp_covered 77,528 output_type transcription factor binding sites all genome_build hg38 cell_type HeLa-S3 biosample_type Cell line biosample_term_id EFO:0002791 tissue_category Female Reproductive encode_experiment_id ENCSR000EVK biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody E2F6 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 89,464 downloaded_date 07/10/2024 release_date 10/29/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF160MCO_RGGCGGGARVN_sorted.bed.gz processed_file_md5 d8b66fe295a76574ff0de4cbf596f9fb wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF160MCO_RGGCGGGARVN_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF160MCO_RGGCGGGARVN_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF160MCO_RGGCGGGARVN.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF160MCO_RGGCGGGARVN.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 64214d8a2fe4530644fa350ab0bcaedc data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens HeLa-S3;Original_cell_type=HeLa-S3;Lab=Peggy Farnham, USC;System=reproductive system;ENCODE_BED_id=ENCFF160MCO;ENCODE_bigBed_id=ENCFF766OCY;PMID=34755879;Motif_sequence=RGGCGGGARVN;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002791;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook HeLa-S3 (repl. 1, 2) Motif finding E2F6 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000EVK] [Life stage: Adult] [TFBS]
E2F6 • HeLa-S3 NGFTBLNM7MJAEW • Factorbook34755879 Motif finding HeLa-S3 TFBS Show metadata Download track Track metadata identifier NGFTBLNM7MJAEW data_source Factorbook Download track Download number_of_intervals 6,822 bp_covered 75,042 output_type transcription factor binding sites all genome_build hg38 cell_type HeLa-S3 biosample_type Cell line biosample_term_id EFO:0002791 tissue_category Female Reproductive encode_experiment_id ENCSR000EVK biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody E2F6 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 82,696 downloaded_date 07/10/2024 release_date 10/29/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF160MCO_TGCGCATGCGC_sorted.bed.gz processed_file_md5 edf3bca410cf082bbaecdb342154e39e wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF160MCO_TGCGCATGCGC_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF160MCO_TGCGCATGCGC_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF160MCO_TGCGCATGCGC.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF160MCO_TGCGCATGCGC.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 01977d1f3616b041c8b707c331db5ca4 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens HeLa-S3;Original_cell_type=HeLa-S3;Lab=Peggy Farnham, USC;System=reproductive system;ENCODE_BED_id=ENCFF160MCO;ENCODE_bigBed_id=ENCFF766OCY;PMID=34755879;Motif_sequence=TGCGCATGCGC;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002791;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook HeLa-S3 (repl. 1, 2) Motif finding E2F6 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000EVK] [Life stage: Adult] [TFBS]
E2F6 • HeLa-S3 NGFTBNG4LR56A3 • Factorbook34755879 Motif finding HeLa-S3 TFBS Show metadata Download track Track metadata identifier NGFTBNG4LR56A3 data_source Factorbook Download track Download number_of_intervals 2,657 bp_covered 21,256 output_type transcription factor binding sites all genome_build hg38 cell_type HeLa-S3 biosample_type Cell line biosample_term_id EFO:0002791 tissue_category Female Reproductive encode_experiment_id ENCSR000EVK biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody E2F6 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 23,780 downloaded_date 07/10/2024 release_date 10/29/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF160MCO_CACGTGVY_sorted.bed.gz processed_file_md5 6cea7d19c66252feb2e0a6fa00928994 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF160MCO_CACGTGVY_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF160MCO_CACGTGVY_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF160MCO_CACGTGVY.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF160MCO_CACGTGVY.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 4a2fc4c30081167e1391e8645baf88cf data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens HeLa-S3;Original_cell_type=HeLa-S3;Lab=Peggy Farnham, USC;System=reproductive system;ENCODE_BED_id=ENCFF160MCO;ENCODE_bigBed_id=ENCFF766OCY;PMID=34755879;Motif_sequence=CACGTGVY;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002791;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook HeLa-S3 (repl. 1, 2) Motif finding E2F6 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000EVK] [Life stage: Adult] [TFBS]
E2F6 • H1-hESC NGFTBPL7KZ37MC • Factorbook34755879 Motif finding H1-hESC TFBS Show metadata Download track Track metadata identifier NGFTBPL7KZ37MC data_source Factorbook Download track Download number_of_intervals 29,965 bp_covered 449,475 output_type transcription factor binding sites all genome_build hg38 cell_type H1-hESC biosample_type Cell line biosample_term_id EFO:0003042 tissue_category Embryo encode_experiment_id ENCSR000BSI biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody E2F6 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 480,898 downloaded_date 07/10/2024 release_date 09/10/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF174AVU_BYTTCCCGCCYHBNB_sorted.bed.gz processed_file_md5 71ffd41ff70510fb7ff0e795c95264b1 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF174AVU_BYTTCCCGCCYHBNB_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF174AVU_BYTTCCCGCCYHBNB_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF174AVU_BYTTCCCGCCYHBNB.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF174AVU_BYTTCCCGCCYHBNB.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 0c27a2ec504750cbabcf6b9c782a37d6 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens H1;Original_cell_type=H1;Lab=Richard Myers, HAIB;System=NR;ENCODE_BED_id=ENCFF174AVU;ENCODE_bigBed_id=ENCFF785DWK;PMID=34755879;Motif_sequence=BYTTCCCGCCYHBNB;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0003042;is_hg38_lifted=no system_category Embryo life_stage Unknown track_name Factorbook H1-hESC (repl. 1, 2) Motif finding E2F6 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BSI] [TFBS]
E2F6 • K562 NGFTBR35Q43QMI • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBR35Q43QMI data_source Factorbook Download track Download number_of_intervals 44,511 bp_covered 667,665 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR000BLI biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody E2F6 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 644,453 downloaded_date 07/10/2024 release_date 07/18/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF831NDQ_YTCTGCGCATGCGCG_sorted.bed.gz processed_file_md5 bc484195432293a2b892a378712e3e42 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF831NDQ_YTCTGCGCATGCGCG_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF831NDQ_YTCTGCGCATGCGCG_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF831NDQ_YTCTGCGCATGCGCG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF831NDQ_YTCTGCGCATGCGCG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 e3486874dcb842fcb2ed1ad22c095b78 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Richard Myers, HAIB;System=immune system;ENCODE_BED_id=ENCFF831NDQ;ENCODE_bigBed_id=ENCFF136LTS;PMID=34755879;Motif_sequence=YTCTGCGCATGCGCG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding E2F6 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BLI] [Life stage: Adult] [TFBS]
E2F6 • H1-hESC NGFTBRNUKDKGXU • Factorbook34755879 Motif finding H1-hESC TFBS Show metadata Download track Track metadata identifier NGFTBRNUKDKGXU data_source Factorbook Download track Download number_of_intervals 9,468 bp_covered 75,744 output_type transcription factor binding sites all genome_build hg38 cell_type H1-hESC biosample_type Cell line biosample_term_id EFO:0003042 tissue_category Embryo encode_experiment_id ENCSR000BSI biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody E2F6 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 93,817 downloaded_date 07/10/2024 release_date 09/10/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF174AVU_CACGTGCY_sorted.bed.gz processed_file_md5 c1ff44ce88330631670ec6144e7ce151 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF174AVU_CACGTGCY_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF174AVU_CACGTGCY_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF174AVU_CACGTGCY.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF174AVU_CACGTGCY.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 58a57f217545e7c04888d115460a318d data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens H1;Original_cell_type=H1;Lab=Richard Myers, HAIB;System=NR;ENCODE_BED_id=ENCFF174AVU;ENCODE_bigBed_id=ENCFF785DWK;PMID=34755879;Motif_sequence=CACGTGCY;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0003042;is_hg38_lifted=no system_category Embryo life_stage Unknown track_name Factorbook H1-hESC (repl. 1, 2) Motif finding E2F6 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BSI] [TFBS]
E2F6 • K562 NGFTBTN6467SIE • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBTN6467SIE data_source Factorbook Download track Download number_of_intervals 12,759 bp_covered 140,349 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR000EWJ biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody E2F6 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 173,540 downloaded_date 07/10/2024 release_date 10/29/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF085GHX_BYTCCCGCCYN_sorted.bed.gz processed_file_md5 868009087ce5225513c43618f6949791 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF085GHX_BYTCCCGCCYN_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF085GHX_BYTCCCGCCYN_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF085GHX_BYTCCCGCCYN.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF085GHX_BYTCCCGCCYN.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 be546aa436cdc5b7cfe9e31f17baec5a data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Peggy Farnham, USC;System=immune system;ENCODE_BED_id=ENCFF085GHX;ENCODE_bigBed_id=ENCFF163WMT;PMID=34755879;Motif_sequence=BYTCCCGCCYN;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding E2F6 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000EWJ] [Life stage: Adult] [TFBS]
E2F6 • HeLa-S3 NGFTBVECJ6YZOJ • Factorbook34755879 Motif finding HeLa-S3 TFBS Show metadata Download track Track metadata identifier NGFTBVECJ6YZOJ data_source Factorbook Download track Download number_of_intervals 18,782 bp_covered 563,460 output_type transcription factor binding sites all genome_build hg38 cell_type HeLa-S3 biosample_type Cell line biosample_term_id EFO:0002791 tissue_category Female Reproductive encode_experiment_id ENCSR000EVK biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody E2F6 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 348,718 downloaded_date 07/10/2024 release_date 10/29/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF160MCO_GAGSSGGGHGKGRGGTGGRRGSRGGBGGAG_sorted.bed.gz processed_file_md5 78f045ccf9b8989e76a7097164f5b63d wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF160MCO_GAGSSGGGHGKGRGGTGGRRGSRGGBGGAG_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF160MCO_GAGSSGGGHGKGRGGTGGRRGSRGGBGGAG_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF160MCO_GAGSSGGGHGKGRGGTGGRRGSRGGBGGAG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF160MCO_GAGSSGGGHGKGRGGTGGRRGSRGGBGGAG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 8b971713ba5a05aebf4c23ad7937265a data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens HeLa-S3;Original_cell_type=HeLa-S3;Lab=Peggy Farnham, USC;System=reproductive system;ENCODE_BED_id=ENCFF160MCO;ENCODE_bigBed_id=ENCFF766OCY;PMID=34755879;Motif_sequence=GAGSSGGGHGKGRGGTGGRRGSRGGBGGAG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002791;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook HeLa-S3 (repl. 1, 2) Motif finding E2F6 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000EVK] [Life stage: Adult] [TFBS]
E2F6 • A549 NGFTBVFIA4MPUT • Factorbook34755879 Motif finding A549 TFBS Show metadata Download track Track metadata identifier NGFTBVFIA4MPUT data_source Factorbook Download track Download number_of_intervals 14,279 bp_covered 214,185 output_type transcription factor binding sites all genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR000BTC biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody E2F6 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 211,772 downloaded_date 07/10/2024 release_date 09/10/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF786NAO_YWCTGCGCMTGCGCR_sorted.bed.gz processed_file_md5 b47678dfc32b155f1fd43de0deaa3124 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF786NAO_YWCTGCGCMTGCGCR_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF786NAO_YWCTGCGCMTGCGCR_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF786NAO_YWCTGCGCMTGCGCR.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF786NAO_YWCTGCGCMTGCGCR.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 8bee4d1169901bb6b8542ac79d9a1e11 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens A549;Original_cell_type=A549;Lab=Richard Myers, HAIB;System=respiratory system;ENCODE_BED_id=ENCFF786NAO;ENCODE_bigBed_id=ENCFF550XVR;PMID=34755879;Motif_sequence=YWCTGCGCMTGCGCR;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name Factorbook A549 (repl. 1, 2) Motif finding E2F6 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BTC] [Life stage: Adult] [TFBS]
E2F6 • K562 NGFTBWVUZUAJ3R • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBWVUZUAJ3R data_source Factorbook Download track Download number_of_intervals 5,336 bp_covered 42,688 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR000EWJ biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody E2F6 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 48,956 downloaded_date 07/10/2024 release_date 10/29/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF085GHX_GCACGTGG_sorted.bed.gz processed_file_md5 f406d3c19fefb8f354e78c300cbc95d3 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF085GHX_GCACGTGG_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF085GHX_GCACGTGG_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF085GHX_GCACGTGG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF085GHX_GCACGTGG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 86548749d9c1efbb2b85b416778ba921 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Peggy Farnham, USC;System=immune system;ENCODE_BED_id=ENCFF085GHX;ENCODE_bigBed_id=ENCFF163WMT;PMID=34755879;Motif_sequence=GCACGTGG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding E2F6 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000EWJ] [Life stage: Adult] [TFBS]
Reference annotation (E2F6) NGHOMLTGCBO2XT • HOMER20513432 Motif finding Reference annotation (E2F6) TFBS Show metadata Download track Track metadata identifier NGHOMLTGCBO2XT data_source HOMER Download track Download number_of_intervals 330,396 bp_covered 3,303,960 output_type transcription factor binding sites genome_build hg38 cell_type Not applicable biosample_type Not applicable biosample_term_id Not applicable tissue_category Not applicable encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody E2F6 assay Motif finding file_format bed bed6+5 Homer file_size 3,124,345 downloaded_date 08/12/2023 release_date 10/19/2020 date_added_to_filer 12/19/2025 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Homer/bed11/hg38/E2F6_E2F.hg38.processed.bed.gz processed_file_md5 8ee4475e5cfb4f95bca3fa21743cdc11 wget_command wget https://filer2.niagads.org/Annotationtracks/Homer/bed11/hg38/E2F6_E2F.hg38.processed.bed.gz -P GADB/Annotationtracks/Homer/bed11/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Homer/bed11/hg38/E2F6_E2F.hg38.processed.bed.gz.tbi -P GADB/Annotationtracks/Homer/bed11/hg38/ link_out_url https://homer.ucsd.edu/homer/ raw_file_url https://homer.ucsd.edu/homer/data/motifs/homer.KnownMotifs.hg38.191020.bed.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/Homer/homer.KnownMotifs.hg38.191020.bed.gz -P GADB/Annotationtracks/Downloads/Homer/ raw_file_md5 7f59c5d4bbf50fea7476a173961ea174 data_category TFBS [Transcription Factor Binding Site] Genomic feature type HOMER transcription factor binding sites track_description version=191020;TF_name=E2F6;DNA_binding_domain=E2F;Cell_type=Hela;Assay=ChIP-Seq;Origin=GSE31477;schema=BED6+5;dataSource_pubmed_id=20513432;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/HOMER.html;original_biosample_term_id=Not applicable;is_hg38_lifted=no system_category Not applicable life_stage Not applicable track_name HOMER Motif finding E2F6 transcription factor binding sites (bed6+5 Homer) [TFBS]
E2F7 • K562 NGENC3CIJ2EDIW • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq K562 TF Show metadata Download track Track metadata identifier NGENC3CIJ2EDIW data_source ENCODE Download track Download number_of_intervals 1,257 bp_covered 369,605 output_type IDR thresholded peaks genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR171CAY biological_replicate 1 technical_replicate 1_1 antibody E2F7 assay TF ChIP-seq file_format bed narrowPeak file_size 24,296 downloaded_date 06/12/2022 release_date 12/30/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF327QAS.bed.gz processed_file_md5 962568d3046652401ff6a5b0718b94e1 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF327QAS.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF327QAS.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF327QAS/@@download/ENCFF327QAS.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF327QAS.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 cc8df5eade8ee360b2e32f7940690172 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens K562;Lab=Michael Snyder, Stanford;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,ENCYCLOPEDIAv2,RegulomeDB_2_1,RegulomeDB_2_2;Life_stage_age=adult 53 years;Reference=PMCID:PMC6724667;External_resources=FactorBook:ENCSR171CAY,GEO:GSE105353;Project=ENCODE;Award=U54HG006996;Experiment_date_released=2017-05-17,2016-11-01;Submitted_track_name=rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=hematopoietic cell,leukocyte,cancer cell;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=K562 cell,K-562 cell,K-562;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name ENCODE K562 (repl. 1) TF ChIP-seq E2F7 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR171CAY] [Life stage: Adult] [TF ChIP-seq peaks]
E2F7 • K562 NGENCIFFM3H42D • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq K562 TF Show metadata Download track Track metadata identifier NGENCIFFM3H42D data_source ENCODE Download track Download number_of_intervals 2,452 bp_covered 769,887 output_type conservative IDR thresholded peaks genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR171CAY biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody E2F7 assay TF ChIP-seq file_format bed narrowPeak file_size 48,327 downloaded_date 06/12/2022 release_date 12/30/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF793HNH.bed.gz processed_file_md5 6f49a05201a3d45e9931757212322747 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF793HNH.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF793HNH.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF793HNH/@@download/ENCFF793HNH.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF793HNH.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 d169c104088ce23cb9a53af16527ece9 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq conservative IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens K562;Lab=Michael Snyder, Stanford;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,ENCYCLOPEDIAv2,RegulomeDB_2_1,RegulomeDB_2_2;Life_stage_age=adult 53 years;Reference=PMCID:PMC6724667;External_resources=FactorBook:ENCSR171CAY,GEO:GSE105353;Project=ENCODE;Award=U54HG006996;Experiment_date_released=2017-05-17,2016-11-01;Submitted_track_name=rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=hematopoietic cell,leukocyte,cancer cell;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=K562 cell,K-562 cell,K-562;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name ENCODE K562 (repl. 1, 2) TF ChIP-seq E2F7 conservative IDR thresholded peaks (narrowPeak) [Experiment: ENCSR171CAY] [Life stage: Adult] [TF ChIP-seq peaks]
E2F7 • K562 NGENCISM76ETPF • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq K562 TF Show metadata Download track Track metadata identifier NGENCISM76ETPF data_source ENCODE Download track Download number_of_intervals 1,864 bp_covered 570,374 output_type IDR thresholded peaks genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR171CAY biological_replicate 2 technical_replicate 2_1 antibody E2F7 assay TF ChIP-seq file_format bed narrowPeak file_size 35,925 downloaded_date 06/12/2022 release_date 12/30/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF114GQS.bed.gz processed_file_md5 320752184c6ea51e6d417b535749ec99 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF114GQS.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF114GQS.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF114GQS/@@download/ENCFF114GQS.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF114GQS.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 b1cc48ec4d48b57d73e157260e8623a0 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens K562;Lab=Michael Snyder, Stanford;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,ENCYCLOPEDIAv2,RegulomeDB_2_1,RegulomeDB_2_2;Life_stage_age=adult 53 years;Reference=PMCID:PMC6724667;External_resources=FactorBook:ENCSR171CAY,GEO:GSE105353;Project=ENCODE;Award=U54HG006996;Experiment_date_released=2017-05-17,2016-11-01;Submitted_track_name=rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=hematopoietic cell,leukocyte,cancer cell;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=K562 cell,K-562 cell,K-562;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name ENCODE K562 (repl. 2) TF ChIP-seq E2F7 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR171CAY] [Life stage: Adult] [TF ChIP-seq peaks]
E2F7 • K562 NGENCXDTJWPON7 • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq K562 TF Show metadata Download track Track metadata identifier NGENCXDTJWPON7 data_source ENCODE Download track Download number_of_intervals 2,624 bp_covered 825,520 output_type IDR thresholded peaks genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR171CAY biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody E2F7 assay TF ChIP-seq file_format bed narrowPeak file_size 51,805 downloaded_date 06/12/2022 release_date 12/30/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF212JSU.bed.gz processed_file_md5 616001d70f8a8ad0130baaabf63736ab wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF212JSU.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF212JSU.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF212JSU/@@download/ENCFF212JSU.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF212JSU.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 dd6bf4909149c5354566950d7951c29f data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens K562;Lab=Michael Snyder, Stanford;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,ENCYCLOPEDIAv2,RegulomeDB_2_1,RegulomeDB_2_2;Life_stage_age=adult 53 years;Reference=PMCID:PMC6724667;External_resources=FactorBook:ENCSR171CAY,GEO:GSE105353;Project=ENCODE;Award=U54HG006996;Experiment_date_released=2017-05-17,2016-11-01;Submitted_track_name=pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=hematopoietic cell,leukocyte,cancer cell;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=K562 cell,K-562 cell,K-562;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name ENCODE K562 (repl. 1, 2) TF ChIP-seq E2F7 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR171CAY] [Life stage: Adult] [TF ChIP-seq peaks]
E2F7 • K562 NGFTB2D542J55V • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTB2D542J55V data_source Factorbook Download track Download number_of_intervals 1,843 bp_covered 20,273 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR171CAY biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody E2F7 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 27,684 downloaded_date 07/10/2024 release_date 05/17/2017 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF938ZPZ_TGGCGGGAAAN_sorted.bed.gz processed_file_md5 7507c7d591b4a40f6a1f544861df2ed2 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF938ZPZ_TGGCGGGAAAN_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF938ZPZ_TGGCGGGAAAN_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF938ZPZ_TGGCGGGAAAN.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF938ZPZ_TGGCGGGAAAN.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 b15cb9bc534a7086fa7e9d9f75f2f73e data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF938ZPZ;ENCODE_bigBed_id=ENCFF212JSU;PMID=34755879;Motif_sequence=TGGCGGGAAAN;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding E2F7 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR171CAY] [Life stage: Adult] [TFBS]
E2F7 • K562 NGFTBVDORGX4EL • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBVDORGX4EL data_source Factorbook Download track Download number_of_intervals 580 bp_covered 12,180 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR171CAY biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody E2F7 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 12,196 downloaded_date 07/10/2024 release_date 05/17/2017 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF938ZPZ_TTATCTCYBYHVHMCAGAYKB_sorted.bed.gz processed_file_md5 5b04835913801fff1dfa167ccc7869d7 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF938ZPZ_TTATCTCYBYHVHMCAGAYKB_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF938ZPZ_TTATCTCYBYHVHMCAGAYKB_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF938ZPZ_TTATCTCYBYHVHMCAGAYKB.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF938ZPZ_TTATCTCYBYHVHMCAGAYKB.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 7943b43e2ffedcba8b13a17984015041 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF938ZPZ;ENCODE_bigBed_id=ENCFF212JSU;PMID=34755879;Motif_sequence=TTATCTCYBYHVHMCAGAYKB;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding E2F7 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR171CAY] [Life stage: Adult] [TFBS]
Reference annotation (E2F7) NGHOMYPIWL5PG2 • HOMER20513432 Motif finding Reference annotation (E2F7) TFBS Show metadata Download track Track metadata identifier NGHOMYPIWL5PG2 data_source HOMER Download track Download number_of_intervals 48,235 bp_covered 578,820 output_type transcription factor binding sites genome_build hg38 cell_type Not applicable biosample_type Not applicable biosample_term_id Not applicable tissue_category Not applicable encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody E2F7 assay Motif finding file_format bed bed6+5 Homer file_size 512,707 downloaded_date 08/12/2023 release_date 10/19/2020 date_added_to_filer 12/19/2025 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Homer/bed11/hg38/E2F7_E2F.hg38.processed.bed.gz processed_file_md5 c3a1229b15a12f39bfe5af62ccf1a482 wget_command wget https://filer2.niagads.org/Annotationtracks/Homer/bed11/hg38/E2F7_E2F.hg38.processed.bed.gz -P GADB/Annotationtracks/Homer/bed11/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Homer/bed11/hg38/E2F7_E2F.hg38.processed.bed.gz.tbi -P GADB/Annotationtracks/Homer/bed11/hg38/ link_out_url https://homer.ucsd.edu/homer/ raw_file_url https://homer.ucsd.edu/homer/data/motifs/homer.KnownMotifs.hg38.191020.bed.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/Homer/homer.KnownMotifs.hg38.191020.bed.gz -P GADB/Annotationtracks/Downloads/Homer/ raw_file_md5 7f59c5d4bbf50fea7476a173961ea174 data_category TFBS [Transcription Factor Binding Site] Genomic feature type HOMER transcription factor binding sites track_description version=191020;TF_name=E2F7;DNA_binding_domain=E2F;Cell_type=Hela;Assay=ChIP-Seq;Origin=GSE32673;schema=BED6+5;dataSource_pubmed_id=20513432;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/HOMER.html;original_biosample_term_id=Not applicable;is_hg38_lifted=no system_category Not applicable life_stage Not applicable track_name HOMER Motif finding E2F7 transcription factor binding sites (bed6+5 Homer) [TFBS]
E2F8 • MCF-7 NGENC2CLUZ3ZUR • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq MCF-7 TF Show metadata Download track Track metadata identifier NGENC2CLUZ3ZUR data_source ENCODE Download track Download number_of_intervals 594 bp_covered 206,215 output_type IDR thresholded peaks genome_build hg38 cell_type MCF-7 biosample_type Cell line biosample_term_id EFO:0001203 tissue_category Breast encode_experiment_id ENCSR897ZXU biological_replicate 2 technical_replicate 2_1 antibody E2F8 assay TF ChIP-seq file_format bed narrowPeak file_size 11,875 downloaded_date 06/12/2022 release_date 12/03/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF512AJF.bed.gz processed_file_md5 56eacabdbda81bfac6971c4b1bc611e3 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF512AJF.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF512AJF.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF512AJF/@@download/ENCFF512AJF.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF512AJF.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 10270cbda9923d504afad8f53adcb2b8 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens MCF-7;Lab=Michael Snyder, Stanford;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,ENCYCLOPEDIAv2,RegulomeDB_2_1,RegulomeDB_2_2;Life_stage_age=adult 69 years;Reference=NR;External_resources=GEO:GSE127615,FactorBook:ENCSR897ZXU;Project=ENCODE;Award=U54HG006996;Experiment_date_released=2018-01-26,2014-07-07;Submitted_track_name=rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=MCF-7;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_system_slims=integumental system,exocrine system;ENCODE_biosample_term_synonyms=MCF7 cell,MCF-7 cell,MCF7;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001203;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name ENCODE MCF-7 (repl. 2) TF ChIP-seq E2F8 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR897ZXU] [Life stage: Adult] [TF ChIP-seq peaks]