EGR1 • K562 NGFTB4OQTYESYA • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTB4OQTYESYA data_source Factorbook Download track Download number_of_intervals 23,536 bp_covered 682,544 output_type transcription factor binding sites significant genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR024CNP biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EGR1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 336,370 downloaded_date 07/10/2024 release_date 05/17/2017 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF298DXR_KGDGKGNGKGHRKGKGDGKGWGDGDGDRK_filtered.bed.gz processed_file_md5 eaac03d53074282d7ad208560d78b977 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF298DXR_KGDGKGNGKGHRKGKGDGKGWGDGDGDRK_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF298DXR_KGDGKGNGKGHRKGKGDGKGWGDGDGDRK_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF298DXR_KGDGKGNGKGHRKGKGDGKGWGDGDGDRK.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF298DXR_KGDGKGNGKGHRKGKGDGKGWGDGDGDRK.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 36caea3a431d07a1176c302c7657500b data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF298DXR;ENCODE_bigBed_id=ENCFF976PLK;PMID=34755879;Motif_sequence=KGDGKGNGKGHRKGKGDGKGWGDGDGDRK;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding EGR1 transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR024CNP] [Life stage: Adult] [TFBS]
EGR1 • Liver NGFTB564GWQF4N • Factorbook34755879 Motif finding Liver TFBS Show metadata Download track Track metadata identifier NGFTB564GWQF4N data_source Factorbook Download track Download number_of_intervals 17,667 bp_covered 530,010 output_type transcription factor binding sites all genome_build hg38 cell_type Liver biosample_type Tissue biosample_term_id UBERON:0002107 tissue_category Liver encode_experiment_id ENCSR290ZOS biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EGR1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 315,790 downloaded_date 07/10/2024 release_date 02/08/2018 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF768POQ_KBCCTYYYTCYBYCTYCNCTTYCYBTYYYB_sorted.bed.gz processed_file_md5 7f79f27a2050b8679df4bca5ebcace25 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF768POQ_KBCCTYYYTCYBYCTYCNCTTYCYBTYYYB_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF768POQ_KBCCTYYYTCYBYCTYCNCTTYCYBTYYYB_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF768POQ_KBCCTYYYTCYBYCTYCNCTTYCYBTYYYB.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF768POQ_KBCCTYYYTCYBYCTYCNCTTYCYBTYYYB.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 67698ad0b6a0a4fff6f90c1227f30016 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens liver tissue female child (4 years);Original_cell_type=liver;Lab=Richard Myers, HAIB;System=exocrine system,endocrine system,digestive system;ENCODE_BED_id=ENCFF768POQ;ENCODE_bigBed_id=ENCFF911LGW;PMID=34755879;Motif_sequence=KBCCTYYYTCYBYCTYCNCTTYCYBTYYYB;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=UBERON:0002107;is_hg38_lifted=no system_category Digestive life_stage Child track_name Factorbook Liver (repl. 1, 2) Motif finding EGR1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR290ZOS] [Life stage: Child] [TFBS]
EGR1 • K562 NGFTB5CFLLBQB2 • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTB5CFLLBQB2 data_source Factorbook Download track Download number_of_intervals 81,443 bp_covered 2,443,290 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR211LTF biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EGR1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 1,225,999 downloaded_date 07/10/2024 release_date 05/17/2017 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF108MQY_CACACACACACACACACWCACACMCVCMCA_sorted.bed.gz processed_file_md5 b7c624509703eb8939a2c488fb44f131 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF108MQY_CACACACACACACACACWCACACMCVCMCA_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF108MQY_CACACACACACACACACWCACACMCVCMCA_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF108MQY_CACACACACACACACACWCACACMCVCMCA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF108MQY_CACACACACACACACACWCACACMCVCMCA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 4b34d0e62d56c13449c2e275da0e530f data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF108MQY;ENCODE_bigBed_id=ENCFF602XPI;PMID=34755879;Motif_sequence=CACACACACACACACACWCACACMCVCMCA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding EGR1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR211LTF] [Life stage: Adult] [TFBS]
EGR1 • Ishikawa NGFTB5EFQ7EO6A • Factorbook34755879 Motif finding Ishikawa TFBS Show metadata Download track Track metadata identifier NGFTB5EFQ7EO6A data_source Factorbook Download track Download number_of_intervals 1,537 bp_covered 30,740 output_type transcription factor binding sites all genome_build hg38 cell_type Ishikawa biosample_type Cell line biosample_term_id EFO:0005718 tissue_category Female Reproductive encode_experiment_id ENCSR000BSQ biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EGR1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 30,838 downloaded_date 07/10/2024 release_date 09/10/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF943XDP_CCCWYAWYHAAGATGGCGGC_sorted.bed.gz processed_file_md5 80e4dadcaacb837733d57950bb8cb08e wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF943XDP_CCCWYAWYHAAGATGGCGGC_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF943XDP_CCCWYAWYHAAGATGGCGGC_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF943XDP_CCCWYAWYHAAGATGGCGGC.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF943XDP_CCCWYAWYHAAGATGGCGGC.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 6357e38ceeabffde60d9653267314a25 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens Ishikawa;Original_cell_type=Ishikawa;Lab=Richard Myers, HAIB;System=reproductive system;ENCODE_BED_id=ENCFF943XDP;ENCODE_bigBed_id=ENCFF550FKT;PMID=34755879;Motif_sequence=CCCWYAWYHAAGATGGCGGC;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0005718;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook Ishikawa (repl. 1, 2) Motif finding EGR1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BSQ] [Life stage: Adult] [TFBS]
EGR1 • Ishikawa NGFTB5NRTCWYF5 • Factorbook34755879 Motif finding Ishikawa TFBS Show metadata Download track Track metadata identifier NGFTB5NRTCWYF5 data_source Factorbook Download track Download number_of_intervals 1 bp_covered 20 output_type transcription factor binding sites significant genome_build hg38 cell_type Ishikawa biosample_type Cell line biosample_term_id EFO:0005718 tissue_category Female Reproductive encode_experiment_id ENCSR000BSQ biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EGR1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 358 downloaded_date 07/10/2024 release_date 09/10/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF943XDP_CCCWYAWYHAAGATGGCGGC_filtered.bed.gz processed_file_md5 b3a3e1d4e5aa221d1c18b9ae472a67e6 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF943XDP_CCCWYAWYHAAGATGGCGGC_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF943XDP_CCCWYAWYHAAGATGGCGGC_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF943XDP_CCCWYAWYHAAGATGGCGGC.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF943XDP_CCCWYAWYHAAGATGGCGGC.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 6357e38ceeabffde60d9653267314a25 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens Ishikawa;Original_cell_type=Ishikawa;Lab=Richard Myers, HAIB;System=reproductive system;ENCODE_BED_id=ENCFF943XDP;ENCODE_bigBed_id=ENCFF550FKT;PMID=34755879;Motif_sequence=CCCWYAWYHAAGATGGCGGC;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0005718;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook Ishikawa (repl. 1, 2) Motif finding EGR1 transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR000BSQ] [Life stage: Adult] [TFBS]
EGR1 • Ishikawa NGFTB5S3GF7IBA • Factorbook34755879 Motif finding Ishikawa TFBS Show metadata Download track Track metadata identifier NGFTB5S3GF7IBA data_source Factorbook Download track Download number_of_intervals 173 bp_covered 2,595 output_type transcription factor binding sites significant genome_build hg38 cell_type Ishikawa biosample_type Cell line biosample_term_id EFO:0005718 tissue_category Female Reproductive encode_experiment_id ENCSR000BSQ biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EGR1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 2,047 downloaded_date 07/10/2024 release_date 09/10/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF943XDP_VSKGCGKGGGCGGVG_filtered.bed.gz processed_file_md5 113e011cb7d49b1946b756562eab263e wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF943XDP_VSKGCGKGGGCGGVG_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF943XDP_VSKGCGKGGGCGGVG_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF943XDP_VSKGCGKGGGCGGVG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF943XDP_VSKGCGKGGGCGGVG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 b744a969742597d8b348af1f6a1189d3 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens Ishikawa;Original_cell_type=Ishikawa;Lab=Richard Myers, HAIB;System=reproductive system;ENCODE_BED_id=ENCFF943XDP;ENCODE_bigBed_id=ENCFF550FKT;PMID=34755879;Motif_sequence=VSKGCGKGGGCGGVG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0005718;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook Ishikawa (repl. 1, 2) Motif finding EGR1 transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR000BSQ] [Life stage: Adult] [TFBS]
EGR1 • HCT116 NGFTB63XDQNCAS • Factorbook34755879 Motif finding HCT116 TFBS Show metadata Download track Track metadata identifier NGFTB63XDQNCAS data_source Factorbook Download track Download number_of_intervals 23,145 bp_covered 347,175 output_type transcription factor binding sites all genome_build hg38 cell_type HCT116 biosample_type Cell line biosample_term_id EFO:0002824 tissue_category Digestive encode_experiment_id ENCSR000BRZ biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EGR1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 357,654 downloaded_date 07/10/2024 release_date 09/10/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF822VKJ_VSKGCGKGGGCGGVG_sorted.bed.gz processed_file_md5 b626aaca7513b7b834fca47be55b35ec wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF822VKJ_VSKGCGKGGGCGGVG_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF822VKJ_VSKGCGKGGGCGGVG_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF822VKJ_VSKGCGKGGGCGGVG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF822VKJ_VSKGCGKGGGCGGVG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 bbbd694f697887e20c2b606ad631f4bc data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens HCT116;Original_cell_type=HCT116;Lab=Richard Myers, HAIB;System=digestive system;ENCODE_BED_id=ENCFF822VKJ;ENCODE_bigBed_id=ENCFF456NPQ;PMID=34755879;Motif_sequence=VSKGCGKGGGCGGVG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002824;is_hg38_lifted=no system_category Digestive life_stage Adult track_name Factorbook HCT116 (repl. 1, 2) Motif finding EGR1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BRZ] [Life stage: Adult] [TFBS]
EGR1 • K562 NGFTB6G65LMTJC • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTB6G65LMTJC data_source Factorbook Download track Download number_of_intervals 75,637 bp_covered 2,193,473 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR024CNP biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EGR1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 1,190,883 downloaded_date 07/10/2024 release_date 05/17/2017 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF298DXR_KGDGKGNGKGHRKGKGDGKGWGDGDGDRK_sorted.bed.gz processed_file_md5 0a0736288da3da40d0d73b13ab40f6e5 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF298DXR_KGDGKGNGKGHRKGKGDGKGWGDGDGDRK_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF298DXR_KGDGKGNGKGHRKGKGDGKGWGDGDGDRK_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF298DXR_KGDGKGNGKGHRKGKGDGKGWGDGDGDRK.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF298DXR_KGDGKGNGKGHRKGKGDGKGWGDGDGDRK.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 36caea3a431d07a1176c302c7657500b data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF298DXR;ENCODE_bigBed_id=ENCFF976PLK;PMID=34755879;Motif_sequence=KGDGKGNGKGHRKGKGDGKGWGDGDGDRK;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding EGR1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR024CNP] [Life stage: Adult] [TFBS]
EGR1 • H1-hESC NGFTB6KIUJFYFY • Factorbook34755879 Motif finding H1-hESC TFBS Show metadata Download track Track metadata identifier NGFTB6KIUJFYFY data_source Factorbook Download track Download number_of_intervals 1,505 bp_covered 30,100 output_type transcription factor binding sites significant genome_build hg38 cell_type H1-hESC biosample_type Cell line biosample_term_id EFO:0003042 tissue_category Embryo encode_experiment_id ENCSR000BJA biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EGR1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 26,106 downloaded_date 07/10/2024 release_date 07/18/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF100KKH_GBGCGKGGGCGGRRSSGSSS_filtered.bed.gz processed_file_md5 bc80936459c32ab175367f58251167c1 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF100KKH_GBGCGKGGGCGGRRSSGSSS_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF100KKH_GBGCGKGGGCGGRRSSGSSS_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF100KKH_GBGCGKGGGCGGRRSSGSSS.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF100KKH_GBGCGKGGGCGGRRSSGSSS.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 a880a559d5e5695bfaed20a5eace620f data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens H1;Original_cell_type=H1;Lab=Richard Myers, HAIB;System=NR;ENCODE_BED_id=ENCFF100KKH;ENCODE_bigBed_id=ENCFF451BLH;PMID=34755879;Motif_sequence=GBGCGKGGGCGGRRSSGSSS;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0003042;is_hg38_lifted=no system_category Embryo life_stage Unknown track_name Factorbook H1-hESC (repl. 1, 2) Motif finding EGR1 transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR000BJA] [TFBS]
EGR1 • H1-hESC NGFTBBR5KCC5DJ • Factorbook34755879 Motif finding H1-hESC TFBS Show metadata Download track Track metadata identifier NGFTBBR5KCC5DJ data_source Factorbook Download track Download number_of_intervals 26,002 bp_covered 520,040 output_type transcription factor binding sites all genome_build hg38 cell_type H1-hESC biosample_type Cell line biosample_term_id EFO:0003042 tissue_category Embryo encode_experiment_id ENCSR000BJA biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EGR1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 469,873 downloaded_date 07/10/2024 release_date 07/18/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF100KKH_GBGCGKGGGCGGRRSSGSSS_sorted.bed.gz processed_file_md5 9c51698c387688ab1229c869b888f182 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF100KKH_GBGCGKGGGCGGRRSSGSSS_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF100KKH_GBGCGKGGGCGGRRSSGSSS_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF100KKH_GBGCGKGGGCGGRRSSGSSS.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF100KKH_GBGCGKGGGCGGRRSSGSSS.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 a880a559d5e5695bfaed20a5eace620f data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens H1;Original_cell_type=H1;Lab=Richard Myers, HAIB;System=NR;ENCODE_BED_id=ENCFF100KKH;ENCODE_bigBed_id=ENCFF451BLH;PMID=34755879;Motif_sequence=GBGCGKGGGCGGRRSSGSSS;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0003042;is_hg38_lifted=no system_category Embryo life_stage Unknown track_name Factorbook H1-hESC (repl. 1, 2) Motif finding EGR1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BJA] [TFBS]
EGR1 • GM12878 NGFTBC7GP67EV7 • Factorbook34755879 Motif finding GM12878 TFBS Show metadata Download track Track metadata identifier NGFTBC7GP67EV7 data_source Factorbook Download track Download number_of_intervals 3,264 bp_covered 48,960 output_type transcription factor binding sites all genome_build hg38 cell_type GM12878 biosample_type Cell line biosample_term_id EFO:0002784 tissue_category Blood encode_experiment_id ENCSR000BRG biological_replicate 3 technical_replicate 3_1 antibody EGR1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 51,122 downloaded_date 07/10/2024 release_date 02/29/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF612EIU_STGCGTGCKBRCGTS_sorted.bed.gz processed_file_md5 1d286ca0676964b49470cda6314da215 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF612EIU_STGCGTGCKBRCGTS_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF612EIU_STGCGTGCKBRCGTS_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF612EIU_STGCGTGCKBRCGTS.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF612EIU_STGCGTGCKBRCGTS.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 ad391e8fee32d0d132ddde907ef9e4c2 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens GM12878;Original_cell_type=GM12878;Lab=Richard Myers, HAIB;System=immune system;ENCODE_BED_id=ENCFF612EIU;ENCODE_bigBed_id=ENCFF784ATC;PMID=34755879;Motif_sequence=STGCGTGCKBRCGTS;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002784;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name Factorbook GM12878 (repl. 3) Motif finding EGR1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BRG] [TFBS]
EGR1 • K562 NGFTBEJOUWXDGM • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBEJOUWXDGM data_source Factorbook Download track Download number_of_intervals 2,877 bp_covered 60,417 output_type transcription factor binding sites significant genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR000BNE biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EGR1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 49,763 downloaded_date 07/10/2024 release_date 07/18/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF566PRZ_SKGCGKGGGCGGVGSSGSSGS_filtered.bed.gz processed_file_md5 541411c4ada8d898e80b32ac6d0007ee wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF566PRZ_SKGCGKGGGCGGVGSSGSSGS_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF566PRZ_SKGCGKGGGCGGVGSSGSSGS_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF566PRZ_SKGCGKGGGCGGVGSSGSSGS.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF566PRZ_SKGCGKGGGCGGVGSSGSSGS.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 fa1a5e6eb6662c89299815026bfd2bb1 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Richard Myers, HAIB;System=immune system;ENCODE_BED_id=ENCFF566PRZ;ENCODE_bigBed_id=ENCFF006PJY;PMID=34755879;Motif_sequence=SKGCGKGGGCGGVGSSGSSGS;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding EGR1 transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR000BNE] [Life stage: Adult] [TFBS]
EGR1 • K562 NGFTBFDAWCL76A • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBFDAWCL76A data_source Factorbook Download track Download number_of_intervals 4,428 bp_covered 35,424 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR000BNE biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EGR1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 45,705 downloaded_date 07/10/2024 release_date 07/18/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF566PRZ_TGACTCAB_sorted.bed.gz processed_file_md5 007745251ab06d8a7cd8b7c5f599cee6 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF566PRZ_TGACTCAB_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF566PRZ_TGACTCAB_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF566PRZ_TGACTCAB.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF566PRZ_TGACTCAB.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 18547e75ca3417c3764b5afbd5a5ba32 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Richard Myers, HAIB;System=immune system;ENCODE_BED_id=ENCFF566PRZ;ENCODE_bigBed_id=ENCFF006PJY;PMID=34755879;Motif_sequence=TGACTCAB;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding EGR1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BNE] [Life stage: Adult] [TFBS]
EGR1 • MCF-7 NGFTBHG4ZGDMBX • Factorbook34755879 Motif finding MCF-7 TFBS Show metadata Download track Track metadata identifier NGFTBHG4ZGDMBX data_source Factorbook Download track Download number_of_intervals 1,263 bp_covered 25,260 output_type transcription factor binding sites all genome_build hg38 cell_type MCF-7 biosample_type Cell line biosample_term_id EFO:0001203 tissue_category Breast encode_experiment_id ENCSR000BUX biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EGR1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 25,193 downloaded_date 07/10/2024 release_date 09/10/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF427RSA_YSGCCATCTTKGKARGGBSY_sorted.bed.gz processed_file_md5 28510defcf3499eafb6c5c0a00289a86 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF427RSA_YSGCCATCTTKGKARGGBSY_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF427RSA_YSGCCATCTTKGKARGGBSY_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF427RSA_YSGCCATCTTKGKARGGBSY.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF427RSA_YSGCCATCTTKGKARGGBSY.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 489b98a3ee45e1d1ac35f3cc2491eb80 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens MCF-7;Original_cell_type=MCF-7;Lab=Richard Myers, HAIB;System=exocrine system,integumental system;ENCODE_BED_id=ENCFF427RSA;ENCODE_bigBed_id=ENCFF679ZBN;PMID=34755879;Motif_sequence=YSGCCATCTTKGKARGGBSY;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001203;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook MCF-7 (repl. 1, 2) Motif finding EGR1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BUX] [Life stage: Adult] [TFBS]
EGR1 • K562 NGFTBHT2H5YLC2 • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBHT2H5YLC2 data_source Factorbook Download track Download number_of_intervals 34,172 bp_covered 375,892 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR024CNP biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EGR1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 359,618 downloaded_date 07/10/2024 release_date 05/17/2017 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF298DXR_ACACMCACACA_sorted.bed.gz processed_file_md5 83eb411c3a9e67330a473f481fe7221e wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF298DXR_ACACMCACACA_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF298DXR_ACACMCACACA_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF298DXR_ACACMCACACA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF298DXR_ACACMCACACA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 1eeedd70d9301705a9e5f6de76bf6791 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF298DXR;ENCODE_bigBed_id=ENCFF976PLK;PMID=34755879;Motif_sequence=ACACMCACACA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding EGR1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR024CNP] [Life stage: Adult] [TFBS]
EGR1 • GM12878 NGFTBIBNDHISOY • Factorbook34755879 Motif finding GM12878 TFBS Show metadata Download track Track metadata identifier NGFTBIBNDHISOY data_source Factorbook Download track Download number_of_intervals 2,374 bp_covered 26,114 output_type transcription factor binding sites all genome_build hg38 cell_type GM12878 biosample_type Cell line biosample_term_id EFO:0002784 tissue_category Blood encode_experiment_id ENCSR000BRG biological_replicate 3 technical_replicate 3_1 antibody EGR1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 29,491 downloaded_date 07/10/2024 release_date 02/29/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF612EIU_GTGCGTGSGCG_sorted.bed.gz processed_file_md5 6aafee5efa6fadbdab3199c2ddc281e1 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF612EIU_GTGCGTGSGCG_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF612EIU_GTGCGTGSGCG_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF612EIU_GTGCGTGSGCG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF612EIU_GTGCGTGSGCG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 a56600706dc7ff5d4007c9f635a700d6 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens GM12878;Original_cell_type=GM12878;Lab=Richard Myers, HAIB;System=immune system;ENCODE_BED_id=ENCFF612EIU;ENCODE_bigBed_id=ENCFF784ATC;PMID=34755879;Motif_sequence=GTGCGTGSGCG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002784;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name Factorbook GM12878 (repl. 3) Motif finding EGR1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BRG] [TFBS]
EGR1 • MCF-7 NGFTBIKZQX2YE2 • Factorbook34755879 Motif finding MCF-7 TFBS Show metadata Download track Track metadata identifier NGFTBIKZQX2YE2 data_source Factorbook Download track Download number_of_intervals 16,887 bp_covered 270,192 output_type transcription factor binding sites all genome_build hg38 cell_type MCF-7 biosample_type Cell line biosample_term_id EFO:0001203 tissue_category Breast encode_experiment_id ENCSR000BUX biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EGR1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 285,478 downloaded_date 07/10/2024 release_date 09/10/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF427RSA_BYBCCGCCCMCGCMSN_sorted.bed.gz processed_file_md5 855437fb64bc32e50b5a11453a92e68f wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF427RSA_BYBCCGCCCMCGCMSN_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF427RSA_BYBCCGCCCMCGCMSN_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF427RSA_BYBCCGCCCMCGCMSN.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF427RSA_BYBCCGCCCMCGCMSN.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 6ec03a8d0c90cc21d496421e5d555fe3 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens MCF-7;Original_cell_type=MCF-7;Lab=Richard Myers, HAIB;System=exocrine system,integumental system;ENCODE_BED_id=ENCFF427RSA;ENCODE_bigBed_id=ENCFF679ZBN;PMID=34755879;Motif_sequence=BYBCCGCCCMCGCMSN;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001203;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook MCF-7 (repl. 1, 2) Motif finding EGR1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BUX] [Life stage: Adult] [TFBS]
EGR1 • MCF-7 NGFTBIN3QSPS2X • Factorbook34755879 Motif finding MCF-7 TFBS Show metadata Download track Track metadata identifier NGFTBIN3QSPS2X data_source Factorbook Download track Download number_of_intervals 14 bp_covered 364 output_type transcription factor binding sites significant genome_build hg38 cell_type MCF-7 biosample_type Cell line biosample_term_id EFO:0001203 tissue_category Breast encode_experiment_id ENCSR000BUX biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EGR1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 647 downloaded_date 07/10/2024 release_date 09/10/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF427RSA_CTGCCCTTMWYHAAGATGGCGGCYRC_filtered.bed.gz processed_file_md5 c86ae3bb70095bac597ffdc969642702 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF427RSA_CTGCCCTTMWYHAAGATGGCGGCYRC_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF427RSA_CTGCCCTTMWYHAAGATGGCGGCYRC_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF427RSA_CTGCCCTTMWYHAAGATGGCGGCYRC.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF427RSA_CTGCCCTTMWYHAAGATGGCGGCYRC.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 1a6c0ed30c65b115ced8cb729c8dae94 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens MCF-7;Original_cell_type=MCF-7;Lab=Richard Myers, HAIB;System=exocrine system,integumental system;ENCODE_BED_id=ENCFF427RSA;ENCODE_bigBed_id=ENCFF679ZBN;PMID=34755879;Motif_sequence=CTGCCCTTMWYHAAGATGGCGGCYRC;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001203;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook MCF-7 (repl. 1, 2) Motif finding EGR1 transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR000BUX] [Life stage: Adult] [TFBS]
EGR1 • K562 NGFTBITRMIITDW • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBITRMIITDW data_source Factorbook Download track Download number_of_intervals 96 bp_covered 1,440 output_type transcription factor binding sites significant genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR211LTF biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EGR1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 1,164 downloaded_date 07/10/2024 release_date 05/17/2017 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF108MQY_YCCGCCCMCGCMCYC_filtered.bed.gz processed_file_md5 7b46e51fb8fb707125b575bd36c2612d wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF108MQY_YCCGCCCMCGCMCYC_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF108MQY_YCCGCCCMCGCMCYC_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF108MQY_YCCGCCCMCGCMCYC.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF108MQY_YCCGCCCMCGCMCYC.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 ca2936151aa14a950bef977dd391d44f data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF108MQY;ENCODE_bigBed_id=ENCFF602XPI;PMID=34755879;Motif_sequence=YCCGCCCMCGCMCYC;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding EGR1 transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR211LTF] [Life stage: Adult] [TFBS]
EGR1 • MCF-7 NGFTBJDENMPABF • Factorbook34755879 Motif finding MCF-7 TFBS Show metadata Download track Track metadata identifier NGFTBJDENMPABF data_source Factorbook Download track Download number_of_intervals 1,367 bp_covered 35,542 output_type transcription factor binding sites all genome_build hg38 cell_type MCF-7 biosample_type Cell line biosample_term_id EFO:0001203 tissue_category Breast encode_experiment_id ENCSR000BUX biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EGR1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 31,326 downloaded_date 07/10/2024 release_date 09/10/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF427RSA_CTGCCCTTMWYHAAGATGGCGGCYRC_sorted.bed.gz processed_file_md5 559f14641bb53a51202c30c7b2f5ac43 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF427RSA_CTGCCCTTMWYHAAGATGGCGGCYRC_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF427RSA_CTGCCCTTMWYHAAGATGGCGGCYRC_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF427RSA_CTGCCCTTMWYHAAGATGGCGGCYRC.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF427RSA_CTGCCCTTMWYHAAGATGGCGGCYRC.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 1a6c0ed30c65b115ced8cb729c8dae94 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens MCF-7;Original_cell_type=MCF-7;Lab=Richard Myers, HAIB;System=exocrine system,integumental system;ENCODE_BED_id=ENCFF427RSA;ENCODE_bigBed_id=ENCFF679ZBN;PMID=34755879;Motif_sequence=CTGCCCTTMWYHAAGATGGCGGCYRC;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001203;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook MCF-7 (repl. 1, 2) Motif finding EGR1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BUX] [Life stage: Adult] [TFBS]