EGR1 • Liver NGFTBJMTYX3WUS • Factorbook34755879 Motif finding Liver TFBS Show metadata Download track Track metadata identifier NGFTBJMTYX3WUS data_source Factorbook Download track Download number_of_intervals 2,282 bp_covered 18,256 output_type transcription factor binding sites all genome_build hg38 cell_type Liver biosample_type Tissue biosample_term_id UBERON:0002107 tissue_category Liver encode_experiment_id ENCSR290ZOS biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EGR1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 25,452 downloaded_date 07/10/2024 release_date 02/08/2018 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF768POQ_CCGGAAGT_sorted.bed.gz processed_file_md5 23fa809d86c56e8d088b93e10a77efe9 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF768POQ_CCGGAAGT_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF768POQ_CCGGAAGT_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF768POQ_CCGGAAGT.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF768POQ_CCGGAAGT.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 2ed046b80ebdae1f95b7fdb0fa89d668 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens liver tissue female child (4 years);Original_cell_type=liver;Lab=Richard Myers, HAIB;System=exocrine system,endocrine system,digestive system;ENCODE_BED_id=ENCFF768POQ;ENCODE_bigBed_id=ENCFF911LGW;PMID=34755879;Motif_sequence=CCGGAAGT;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=UBERON:0002107;is_hg38_lifted=no system_category Digestive life_stage Child track_name Factorbook Liver (repl. 1, 2) Motif finding EGR1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR290ZOS] [Life stage: Child] [TFBS]
EGR1 • H1-hESC NGFTBJX5BXN24D • Factorbook34755879 Motif finding H1-hESC TFBS Show metadata Download track Track metadata identifier NGFTBJX5BXN24D data_source Factorbook Download track Download number_of_intervals 1,231 bp_covered 24,620 output_type transcription factor binding sites all genome_build hg38 cell_type H1-hESC biosample_type Cell line biosample_term_id EFO:0003042 tissue_category Embryo encode_experiment_id ENCSR000BJA biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EGR1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 24,658 downloaded_date 07/10/2024 release_date 07/18/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF100KKH_TCCTAGAGAGGACACGGAAG_sorted.bed.gz processed_file_md5 83cc151c9521a352bb2e8743d6b618f7 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF100KKH_TCCTAGAGAGGACACGGAAG_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF100KKH_TCCTAGAGAGGACACGGAAG_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF100KKH_TCCTAGAGAGGACACGGAAG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF100KKH_TCCTAGAGAGGACACGGAAG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 6eee356bffe0f2178adaf6a8a78f1c05 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens H1;Original_cell_type=H1;Lab=Richard Myers, HAIB;System=NR;ENCODE_BED_id=ENCFF100KKH;ENCODE_bigBed_id=ENCFF451BLH;PMID=34755879;Motif_sequence=TCCTAGAGAGGACACGGAAG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0003042;is_hg38_lifted=no system_category Embryo life_stage Unknown track_name Factorbook H1-hESC (repl. 1, 2) Motif finding EGR1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BJA] [TFBS]
EGR1 • K562 NGFTBJYHXNNJSN • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBJYHXNNJSN data_source Factorbook Download track Download number_of_intervals 22,252 bp_covered 667,560 output_type transcription factor binding sites significant genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR211LTF biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EGR1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 290,395 downloaded_date 07/10/2024 release_date 05/17/2017 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF108MQY_CACACACACACACACACWCACACMCVCMCA_filtered.bed.gz processed_file_md5 d0aa0278529d82ac607379a53cd3e4d4 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF108MQY_CACACACACACACACACWCACACMCVCMCA_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF108MQY_CACACACACACACACACWCACACMCVCMCA_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF108MQY_CACACACACACACACACWCACACMCVCMCA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF108MQY_CACACACACACACACACWCACACMCVCMCA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 4b34d0e62d56c13449c2e275da0e530f data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF108MQY;ENCODE_bigBed_id=ENCFF602XPI;PMID=34755879;Motif_sequence=CACACACACACACACACWCACACMCVCMCA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding EGR1 transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR211LTF] [Life stage: Adult] [TFBS]
EGR1 • GM12878 NGFTBKIFKUY7VX • Factorbook34755879 Motif finding GM12878 TFBS Show metadata Download track Track metadata identifier NGFTBKIFKUY7VX data_source Factorbook Download track Download number_of_intervals 2,703 bp_covered 54,060 output_type transcription factor binding sites significant genome_build hg38 cell_type GM12878 biosample_type Cell line biosample_term_id EFO:0002784 tissue_category Blood encode_experiment_id ENCSR000BMQ biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EGR1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 46,877 downloaded_date 07/10/2024 release_date 07/18/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF637UJN_SSCSCCYCCGCCCMCGCMSB_filtered.bed.gz processed_file_md5 606736d0a3392c3aaf77b02ed6812467 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF637UJN_SSCSCCYCCGCCCMCGCMSB_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF637UJN_SSCSCCYCCGCCCMCGCMSB_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF637UJN_SSCSCCYCCGCCCMCGCMSB.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF637UJN_SSCSCCYCCGCCCMCGCMSB.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 1b85b042b8e7827471b9ea53a49543f1 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens GM12878;Original_cell_type=GM12878;Lab=Richard Myers, HAIB;System=immune system;ENCODE_BED_id=ENCFF637UJN;ENCODE_bigBed_id=ENCFF092DJY;PMID=34755879;Motif_sequence=SSCSCCYCCGCCCMCGCMSB;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002784;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name Factorbook GM12878 (repl. 1, 2) Motif finding EGR1 transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR000BMQ] [TFBS]
EGR1 • GM12878 NGFTBKZBSZYXFT • Factorbook34755879 Motif finding GM12878 TFBS Show metadata Download track Track metadata identifier NGFTBKZBSZYXFT data_source Factorbook Download track Download number_of_intervals 2,698 bp_covered 78,242 output_type transcription factor binding sites significant genome_build hg38 cell_type GM12878 biosample_type Cell line biosample_term_id EFO:0002784 tissue_category Blood encode_experiment_id ENCSR000BMQ biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EGR1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 39,481 downloaded_date 07/10/2024 release_date 07/18/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF637UJN_ACACACWCDCACWCACMCACACWCHCMCA_filtered.bed.gz processed_file_md5 6d94aa764b1fdd34f26cf78ff0a5a529 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF637UJN_ACACACWCDCACWCACMCACACWCHCMCA_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF637UJN_ACACACWCDCACWCACMCACACWCHCMCA_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF637UJN_ACACACWCDCACWCACMCACACWCHCMCA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF637UJN_ACACACWCDCACWCACMCACACWCHCMCA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 9cc8f33ef67688f75421643f47b206d5 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens GM12878;Original_cell_type=GM12878;Lab=Richard Myers, HAIB;System=immune system;ENCODE_BED_id=ENCFF637UJN;ENCODE_bigBed_id=ENCFF092DJY;PMID=34755879;Motif_sequence=ACACACWCDCACWCACMCACACWCHCMCA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002784;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name Factorbook GM12878 (repl. 1, 2) Motif finding EGR1 transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR000BMQ] [TFBS]
EGR1 • Liver NGFTBLQQZ2UEFC • Factorbook34755879 Motif finding Liver TFBS Show metadata Download track Track metadata identifier NGFTBLQQZ2UEFC data_source Factorbook Download track Download number_of_intervals 15,976 bp_covered 239,640 output_type transcription factor binding sites all genome_build hg38 cell_type Liver biosample_type Tissue biosample_term_id UBERON:0002107 tissue_category Liver encode_experiment_id ENCSR736BUG biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EGR1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 258,890 downloaded_date 07/10/2024 release_date 06/30/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF268GPU_BCCGCCCMCGCMBBS_sorted.bed.gz processed_file_md5 c4e39eefe7496212d9ff06d2db6b19d0 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF268GPU_BCCGCCCMCGCMBBS_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF268GPU_BCCGCCCMCGCMBBS_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF268GPU_BCCGCCCMCGCMBBS.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF268GPU_BCCGCCCMCGCMBBS.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 ae4d30d115bb3a228c701ceff7910f93 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens with nonobstructive coronary artery disease| liver tissue male adult (32 years);Original_cell_type=liver;Lab=Richard Myers, HAIB;System=exocrine system,endocrine system,digestive system;ENCODE_BED_id=ENCFF268GPU;ENCODE_bigBed_id=ENCFF130MBW;PMID=34755879;Motif_sequence=BCCGCCCMCGCMBBS;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=UBERON:0002107;is_hg38_lifted=no system_category Digestive life_stage Adult track_name Factorbook Liver (repl. 1, 2) Motif finding EGR1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR736BUG] [Life stage: Adult] [TFBS]
EGR1 • K562 NGFTBM5UAS4F4B • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBM5UAS4F4B data_source Factorbook Download track Download number_of_intervals 54,917 bp_covered 823,755 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR211LTF biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EGR1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 741,785 downloaded_date 07/10/2024 release_date 05/17/2017 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF108MQY_TYYCYCYTYCTCTYC_sorted.bed.gz processed_file_md5 042a26158f73167b40a9702ea53fa9d3 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF108MQY_TYYCYCYTYCTCTYC_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF108MQY_TYYCYCYTYCTCTYC_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF108MQY_TYYCYCYTYCTCTYC.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF108MQY_TYYCYCYTYCTCTYC.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 cf15cbcb6c5f4fbf468c1c6ebeed2279 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF108MQY;ENCODE_bigBed_id=ENCFF602XPI;PMID=34755879;Motif_sequence=TYYCYCYTYCTCTYC;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding EGR1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR211LTF] [Life stage: Adult] [TFBS]
EGR1 • K562 NGFTBMUVX22KHB • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBMUVX22KHB data_source Factorbook Download track Download number_of_intervals 46,970 bp_covered 704,550 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR211LTF biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EGR1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 696,400 downloaded_date 07/10/2024 release_date 05/17/2017 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF108MQY_YCCGCCCMCGCMCYC_sorted.bed.gz processed_file_md5 38631fd0ed531453956b91be5f69c319 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF108MQY_YCCGCCCMCGCMCYC_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF108MQY_YCCGCCCMCGCMCYC_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF108MQY_YCCGCCCMCGCMCYC.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF108MQY_YCCGCCCMCGCMCYC.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 ca2936151aa14a950bef977dd391d44f data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF108MQY;ENCODE_bigBed_id=ENCFF602XPI;PMID=34755879;Motif_sequence=YCCGCCCMCGCMCYC;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding EGR1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR211LTF] [Life stage: Adult] [TFBS]
EGR1 • K562 NGFTBNFYNVZILZ • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBNFYNVZILZ data_source Factorbook Download track Download number_of_intervals 41,932 bp_covered 587,048 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR000BNE biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EGR1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 630,557 downloaded_date 07/10/2024 release_date 07/18/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF566PRZ_YTYCCTCCTCCTCC_sorted.bed.gz processed_file_md5 9c4ac00fc4cb35dc4df739574ae06a30 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF566PRZ_YTYCCTCCTCCTCC_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF566PRZ_YTYCCTCCTCCTCC_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF566PRZ_YTYCCTCCTCCTCC.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF566PRZ_YTYCCTCCTCCTCC.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 de3b15ac360ed65b12993bacd4b293c9 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Richard Myers, HAIB;System=immune system;ENCODE_BED_id=ENCFF566PRZ;ENCODE_bigBed_id=ENCFF006PJY;PMID=34755879;Motif_sequence=YTYCCTCCTCCTCC;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding EGR1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BNE] [Life stage: Adult] [TFBS]
EGR1 • H1-hESC NGFTBNO2I6PYFN • Factorbook34755879 Motif finding H1-hESC TFBS Show metadata Download track Track metadata identifier NGFTBNO2I6PYFN data_source Factorbook Download track Download number_of_intervals 4 bp_covered 80 output_type transcription factor binding sites significant genome_build hg38 cell_type H1-hESC biosample_type Cell line biosample_term_id EFO:0003042 tissue_category Embryo encode_experiment_id ENCSR000BJA biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EGR1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 408 downloaded_date 07/10/2024 release_date 07/18/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF100KKH_TCCTAGAGAGGACACGGAAG_filtered.bed.gz processed_file_md5 93ac5d0b18c59f116c4a1a4619842b9b wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF100KKH_TCCTAGAGAGGACACGGAAG_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF100KKH_TCCTAGAGAGGACACGGAAG_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF100KKH_TCCTAGAGAGGACACGGAAG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF100KKH_TCCTAGAGAGGACACGGAAG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 6eee356bffe0f2178adaf6a8a78f1c05 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens H1;Original_cell_type=H1;Lab=Richard Myers, HAIB;System=NR;ENCODE_BED_id=ENCFF100KKH;ENCODE_bigBed_id=ENCFF451BLH;PMID=34755879;Motif_sequence=TCCTAGAGAGGACACGGAAG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0003042;is_hg38_lifted=no system_category Embryo life_stage Unknown track_name Factorbook H1-hESC (repl. 1, 2) Motif finding EGR1 transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR000BJA] [TFBS]
EGR1 • H1-hESC NGFTBOBE22MASR • Factorbook34755879 Motif finding H1-hESC TFBS Show metadata Download track Track metadata identifier NGFTBOBE22MASR data_source Factorbook Download track Download number_of_intervals 77,934 bp_covered 2,338,020 output_type transcription factor binding sites all genome_build hg38 cell_type H1-hESC biosample_type Cell line biosample_term_id EFO:0003042 tissue_category Embryo encode_experiment_id ENCSR000BJA biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EGR1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 1,220,509 downloaded_date 07/10/2024 release_date 07/18/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF100KKH_GRGRRAGRGARRGRRRGMRGGRGRRAGRRR_sorted.bed.gz processed_file_md5 2ab0d229edfbc65b324c8e99f4c0287d wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF100KKH_GRGRRAGRGARRGRRRGMRGGRGRRAGRRR_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF100KKH_GRGRRAGRGARRGRRRGMRGGRGRRAGRRR_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF100KKH_GRGRRAGRGARRGRRRGMRGGRGRRAGRRR.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF100KKH_GRGRRAGRGARRGRRRGMRGGRGRRAGRRR.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 d1910a04b3634b0fcd09bb47dc9765a8 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens H1;Original_cell_type=H1;Lab=Richard Myers, HAIB;System=NR;ENCODE_BED_id=ENCFF100KKH;ENCODE_bigBed_id=ENCFF451BLH;PMID=34755879;Motif_sequence=GRGRRAGRGARRGRRRGMRGGRGRRAGRRR;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0003042;is_hg38_lifted=no system_category Embryo life_stage Unknown track_name Factorbook H1-hESC (repl. 1, 2) Motif finding EGR1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BJA] [TFBS]
EGR1 • Liver NGFTBOHH3FHZKW • Factorbook34755879 Motif finding Liver TFBS Show metadata Download track Track metadata identifier NGFTBOHH3FHZKW data_source Factorbook Download track Download number_of_intervals 207 bp_covered 3,933 output_type transcription factor binding sites significant genome_build hg38 cell_type Liver biosample_type Tissue biosample_term_id UBERON:0002107 tissue_category Liver encode_experiment_id ENCSR290ZOS biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EGR1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 3,491 downloaded_date 07/10/2024 release_date 02/08/2018 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF768POQ_VKGCGKGGGCGGVRVNGSS_filtered.bed.gz processed_file_md5 22ab88b15964ef0ad9e7a56b2bdf5221 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF768POQ_VKGCGKGGGCGGVRVNGSS_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF768POQ_VKGCGKGGGCGGVRVNGSS_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF768POQ_VKGCGKGGGCGGVRVNGSS.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF768POQ_VKGCGKGGGCGGVRVNGSS.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 1568ec93454c158a54ead9a9cf01c899 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens liver tissue female child (4 years);Original_cell_type=liver;Lab=Richard Myers, HAIB;System=exocrine system,endocrine system,digestive system;ENCODE_BED_id=ENCFF768POQ;ENCODE_bigBed_id=ENCFF911LGW;PMID=34755879;Motif_sequence=VKGCGKGGGCGGVRVNGSS;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=UBERON:0002107;is_hg38_lifted=no system_category Digestive life_stage Child track_name Factorbook Liver (repl. 1, 2) Motif finding EGR1 transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR290ZOS] [Life stage: Child] [TFBS]
EGR1 • HCT116 NGFTBPA57GYLHS • Factorbook34755879 Motif finding HCT116 TFBS Show metadata Download track Track metadata identifier NGFTBPA57GYLHS data_source Factorbook Download track Download number_of_intervals 325 bp_covered 4,875 output_type transcription factor binding sites significant genome_build hg38 cell_type HCT116 biosample_type Cell line biosample_term_id EFO:0002824 tissue_category Digestive encode_experiment_id ENCSR000BRZ biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EGR1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 3,294 downloaded_date 07/10/2024 release_date 09/10/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF822VKJ_VSKGCGKGGGCGGVG_filtered.bed.gz processed_file_md5 ea50470837c1f8ff6dac5861dabbc0f8 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF822VKJ_VSKGCGKGGGCGGVG_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF822VKJ_VSKGCGKGGGCGGVG_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF822VKJ_VSKGCGKGGGCGGVG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF822VKJ_VSKGCGKGGGCGGVG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 bbbd694f697887e20c2b606ad631f4bc data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens HCT116;Original_cell_type=HCT116;Lab=Richard Myers, HAIB;System=digestive system;ENCODE_BED_id=ENCFF822VKJ;ENCODE_bigBed_id=ENCFF456NPQ;PMID=34755879;Motif_sequence=VSKGCGKGGGCGGVG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002824;is_hg38_lifted=no system_category Digestive life_stage Adult track_name Factorbook HCT116 (repl. 1, 2) Motif finding EGR1 transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR000BRZ] [Life stage: Adult] [TFBS]
EGR1 • K562 NGFTBQBIUKD2ON • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBQBIUKD2ON data_source Factorbook Download track Download number_of_intervals 81,170 bp_covered 1,704,570 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR000BNE biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EGR1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 1,502,953 downloaded_date 07/10/2024 release_date 07/18/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF566PRZ_SKGCGKGGGCGGVGSSGSSGS_sorted.bed.gz processed_file_md5 0084553a6f704614adfbe613c7d86aa1 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF566PRZ_SKGCGKGGGCGGVGSSGSSGS_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF566PRZ_SKGCGKGGGCGGVGSSGSSGS_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF566PRZ_SKGCGKGGGCGGVGSSGSSGS.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF566PRZ_SKGCGKGGGCGGVGSSGSSGS.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 fa1a5e6eb6662c89299815026bfd2bb1 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Richard Myers, HAIB;System=immune system;ENCODE_BED_id=ENCFF566PRZ;ENCODE_bigBed_id=ENCFF006PJY;PMID=34755879;Motif_sequence=SKGCGKGGGCGGVGSSGSSGS;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding EGR1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BNE] [Life stage: Adult] [TFBS]
EGR1 • H1-hESC NGFTBQCDKDZ6VF • Factorbook34755879 Motif finding H1-hESC TFBS Show metadata Download track Track metadata identifier NGFTBQCDKDZ6VF data_source Factorbook Download track Download number_of_intervals 15,302 bp_covered 459,060 output_type transcription factor binding sites significant genome_build hg38 cell_type H1-hESC biosample_type Cell line biosample_term_id EFO:0003042 tissue_category Embryo encode_experiment_id ENCSR000BJA biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EGR1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 233,821 downloaded_date 07/10/2024 release_date 07/18/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF100KKH_GRGRRAGRGARRGRRRGMRGGRGRRAGRRR_filtered.bed.gz processed_file_md5 5a863e853d0f07cd23a4ad625b877f20 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF100KKH_GRGRRAGRGARRGRRRGMRGGRGRRAGRRR_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF100KKH_GRGRRAGRGARRGRRRGMRGGRGRRAGRRR_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF100KKH_GRGRRAGRGARRGRRRGMRGGRGRRAGRRR.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF100KKH_GRGRRAGRGARRGRRRGMRGGRGRRAGRRR.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 d1910a04b3634b0fcd09bb47dc9765a8 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens H1;Original_cell_type=H1;Lab=Richard Myers, HAIB;System=NR;ENCODE_BED_id=ENCFF100KKH;ENCODE_bigBed_id=ENCFF451BLH;PMID=34755879;Motif_sequence=GRGRRAGRGARRGRRRGMRGGRGRRAGRRR;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0003042;is_hg38_lifted=no system_category Embryo life_stage Unknown track_name Factorbook H1-hESC (repl. 1, 2) Motif finding EGR1 transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR000BJA] [TFBS]
EGR1 • Liver NGFTBRNXN23LS7 • Factorbook34755879 Motif finding Liver TFBS Show metadata Download track Track metadata identifier NGFTBRNXN23LS7 data_source Factorbook Download track Download number_of_intervals 158 bp_covered 4,740 output_type transcription factor binding sites significant genome_build hg38 cell_type Liver biosample_type Tissue biosample_term_id UBERON:0002107 tissue_category Liver encode_experiment_id ENCSR290ZOS biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EGR1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 3,090 downloaded_date 07/10/2024 release_date 02/08/2018 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF768POQ_KBCCTYYYTCYBYCTYCNCTTYCYBTYYYB_filtered.bed.gz processed_file_md5 718e3a2a7e4fdd8b74039005cb83b52e wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF768POQ_KBCCTYYYTCYBYCTYCNCTTYCYBTYYYB_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF768POQ_KBCCTYYYTCYBYCTYCNCTTYCYBTYYYB_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF768POQ_KBCCTYYYTCYBYCTYCNCTTYCYBTYYYB.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF768POQ_KBCCTYYYTCYBYCTYCNCTTYCYBTYYYB.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 67698ad0b6a0a4fff6f90c1227f30016 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens liver tissue female child (4 years);Original_cell_type=liver;Lab=Richard Myers, HAIB;System=exocrine system,endocrine system,digestive system;ENCODE_BED_id=ENCFF768POQ;ENCODE_bigBed_id=ENCFF911LGW;PMID=34755879;Motif_sequence=KBCCTYYYTCYBYCTYCNCTTYCYBTYYYB;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=UBERON:0002107;is_hg38_lifted=no system_category Digestive life_stage Child track_name Factorbook Liver (repl. 1, 2) Motif finding EGR1 transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR290ZOS] [Life stage: Child] [TFBS]
EGR1 • Ishikawa NGFTBROAL44S5Y • Factorbook34755879 Motif finding Ishikawa TFBS Show metadata Download track Track metadata identifier NGFTBROAL44S5Y data_source Factorbook Download track Download number_of_intervals 19,336 bp_covered 290,040 output_type transcription factor binding sites all genome_build hg38 cell_type Ishikawa biosample_type Cell line biosample_term_id EFO:0005718 tissue_category Female Reproductive encode_experiment_id ENCSR000BSQ biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EGR1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 319,750 downloaded_date 07/10/2024 release_date 09/10/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF943XDP_VSKGCGKGGGCGGVG_sorted.bed.gz processed_file_md5 37b0de20a109fccfbd97b6dc8abd4f0c wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF943XDP_VSKGCGKGGGCGGVG_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF943XDP_VSKGCGKGGGCGGVG_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF943XDP_VSKGCGKGGGCGGVG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF943XDP_VSKGCGKGGGCGGVG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 b744a969742597d8b348af1f6a1189d3 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens Ishikawa;Original_cell_type=Ishikawa;Lab=Richard Myers, HAIB;System=reproductive system;ENCODE_BED_id=ENCFF943XDP;ENCODE_bigBed_id=ENCFF550FKT;PMID=34755879;Motif_sequence=VSKGCGKGGGCGGVG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0005718;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook Ishikawa (repl. 1, 2) Motif finding EGR1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BSQ] [Life stage: Adult] [TFBS]
EGR1 • Liver NGFTBSV3P6V62X • Factorbook34755879 Motif finding Liver TFBS Show metadata Download track Track metadata identifier NGFTBSV3P6V62X data_source Factorbook Download track Download number_of_intervals 3,118 bp_covered 90,422 output_type transcription factor binding sites all genome_build hg38 cell_type Liver biosample_type Tissue biosample_term_id UBERON:0002107 tissue_category Liver encode_experiment_id ENCSR736BUG biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EGR1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 73,338 downloaded_date 07/10/2024 release_date 06/30/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF268GPU_HTKACTNATHWTTTCCAYYNBBNWDVAMW_sorted.bed.gz processed_file_md5 f6e984c6199075881098db3bc841bc95 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF268GPU_HTKACTNATHWTTTCCAYYNBBNWDVAMW_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF268GPU_HTKACTNATHWTTTCCAYYNBBNWDVAMW_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF268GPU_HTKACTNATHWTTTCCAYYNBBNWDVAMW.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF268GPU_HTKACTNATHWTTTCCAYYNBBNWDVAMW.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 ddeb4f1b444cc68d1d9e970cad77f4f8 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens with nonobstructive coronary artery disease| liver tissue male adult (32 years);Original_cell_type=liver;Lab=Richard Myers, HAIB;System=exocrine system,endocrine system,digestive system;ENCODE_BED_id=ENCFF268GPU;ENCODE_bigBed_id=ENCFF130MBW;PMID=34755879;Motif_sequence=HTKACTNATHWTTTCCAYYNBBNWDVAMW;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=UBERON:0002107;is_hg38_lifted=no system_category Digestive life_stage Adult track_name Factorbook Liver (repl. 1, 2) Motif finding EGR1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR736BUG] [Life stage: Adult] [TFBS]
EGR1 • GM12878 NGFTBT7RM7LFBG • Factorbook34755879 Motif finding GM12878 TFBS Show metadata Download track Track metadata identifier NGFTBT7RM7LFBG data_source Factorbook Download track Download number_of_intervals 1,269 bp_covered 13,959 output_type transcription factor binding sites all genome_build hg38 cell_type GM12878 biosample_type Cell line biosample_term_id EFO:0002784 tissue_category Blood encode_experiment_id ENCSR000BRG biological_replicate 3 technical_replicate 3_1 antibody EGR1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 18,966 downloaded_date 07/10/2024 release_date 02/29/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF612EIU_CACTTCCGGBB_sorted.bed.gz processed_file_md5 0fbbe6f8b4a1ba76b1f13a1570a50633 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF612EIU_CACTTCCGGBB_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF612EIU_CACTTCCGGBB_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF612EIU_CACTTCCGGBB.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF612EIU_CACTTCCGGBB.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 69a6504892958b76be177e2b6056a09a data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens GM12878;Original_cell_type=GM12878;Lab=Richard Myers, HAIB;System=immune system;ENCODE_BED_id=ENCFF612EIU;ENCODE_bigBed_id=ENCFF784ATC;PMID=34755879;Motif_sequence=CACTTCCGGBB;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002784;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name Factorbook GM12878 (repl. 3) Motif finding EGR1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BRG] [TFBS]
EGR1 • MCF-7 NGFTBTU6GBOQF2 • Factorbook34755879 Motif finding MCF-7 TFBS Show metadata Download track Track metadata identifier NGFTBTU6GBOQF2 data_source Factorbook Download track Download number_of_intervals 1 bp_covered 20 output_type transcription factor binding sites significant genome_build hg38 cell_type MCF-7 biosample_type Cell line biosample_term_id EFO:0001203 tissue_category Breast encode_experiment_id ENCSR000BUX biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EGR1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 359 downloaded_date 07/10/2024 release_date 09/10/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF427RSA_YSGCCATCTTKGKARGGBSY_filtered.bed.gz processed_file_md5 5eda54d1ca8724483d94da593b0d2ea4 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF427RSA_YSGCCATCTTKGKARGGBSY_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF427RSA_YSGCCATCTTKGKARGGBSY_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF427RSA_YSGCCATCTTKGKARGGBSY.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF427RSA_YSGCCATCTTKGKARGGBSY.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 489b98a3ee45e1d1ac35f3cc2491eb80 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens MCF-7;Original_cell_type=MCF-7;Lab=Richard Myers, HAIB;System=exocrine system,integumental system;ENCODE_BED_id=ENCFF427RSA;ENCODE_bigBed_id=ENCFF679ZBN;PMID=34755879;Motif_sequence=YSGCCATCTTKGKARGGBSY;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001203;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook MCF-7 (repl. 1, 2) Motif finding EGR1 transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR000BUX] [Life stage: Adult] [TFBS]