EHMT2 • K562 NGENCY7XLYOZBM • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq K562 TF Show metadata Download track Track metadata identifier NGENCY7XLYOZBM data_source ENCODE Download track Download number_of_intervals 14,904 bp_covered 5,354,275 output_type conservative IDR thresholded peaks genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR175EOM biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EHMT2 assay TF ChIP-seq file_format bed narrowPeak file_size 300,350 downloaded_date 06/12/2022 release_date 11/28/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF636DEG.bed.gz processed_file_md5 cb6bf7f9498ad5bfa5cd79ab68a97189 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF636DEG.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF636DEG.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF636DEG/@@download/ENCFF636DEG.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF636DEG.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 5be3da8355bdf6536c75ac8f13572435 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq conservative IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens K562;Lab=Michael Snyder, Stanford;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,ENCYCLOPEDIAv2,RegulomeDB_2_1,RegulomeDB_2_2;Life_stage_age=adult 53 years;Reference=PMCID:PMC6724667;External_resources=GEO:GSE127473;Project=ENCODE;Award=U54HG006996;Experiment_date_released=2018-02-13,2014-07-07;Submitted_track_name=rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=hematopoietic cell,cancer cell,leukocyte;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=K-562, K562 cell,K-562 cell;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name ENCODE K562 (repl. 1, 2) TF ChIP-seq EHMT2 conservative IDR thresholded peaks (narrowPeak) [Experiment: ENCSR175EOM] [Life stage: Adult] [TF ChIP-seq peaks]
EHMT2 • A549 NGENCZRPIXYOBD • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq A549 TF Show metadata Download track Track metadata identifier NGENCZRPIXYOBD data_source ENCODE Download track Download number_of_intervals 2,109 bp_covered 875,517 output_type conservative IDR thresholded peaks genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR321BJQ biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EHMT2 assay TF ChIP-seq file_format bed narrowPeak file_size 37,921 downloaded_date 06/12/2022 release_date 12/01/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF192UOQ.bed.gz processed_file_md5 648a83efbab724bb865d960b3447c273 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF192UOQ.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF192UOQ.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF192UOQ/@@download/ENCFF192UOQ.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF192UOQ.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 ce762684b0ccf98538f1a6bf0a2a6bbe data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq conservative IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens A549;Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=adult 58 years;Reference=NR;External_resources=GEO:GSE100996;Project=ENCODE;Award=U54HG006991;Experiment_date_released=2016-11-23,2016-06-30;Submitted_track_name=rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=A549;ENCODE_cell_slims=cancer cell;ENCODE_system_slims=respiratory system;ENCODE_biosample_term_synonyms=A-549,A549 cell;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name ENCODE A549 (repl. 1, 2) TF ChIP-seq EHMT2 conservative IDR thresholded peaks (narrowPeak) [Experiment: ENCSR321BJQ] [Life stage: Adult] [TF ChIP-seq peaks]
EHMT2 • K562 NGFTB22VDCI2DH • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTB22VDCI2DH data_source Factorbook Download track Download number_of_intervals 4,317 bp_covered 64,755 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR175EOM biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EHMT2 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 75,978 downloaded_date 07/10/2024 release_date 02/13/2018 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF189OHQ_CAGCACCATGGACAG_sorted.bed.gz processed_file_md5 11bc3315122135ff105118fb00b0e3ab wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF189OHQ_CAGCACCATGGACAG_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF189OHQ_CAGCACCATGGACAG_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF189OHQ_CAGCACCATGGACAG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF189OHQ_CAGCACCATGGACAG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 afb601c11c39f195e534a1c7aa6121da data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF189OHQ;ENCODE_bigBed_id=ENCFF053BWO;PMID=34755879;Motif_sequence=CAGCACCATGGACAG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding EHMT2 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR175EOM] [Life stage: Adult] [TFBS]
EHMT2 • A549 NGFTB6PWQZZYWW • Factorbook34755879 Motif finding A549 TFBS Show metadata Download track Track metadata identifier NGFTB6PWQZZYWW data_source Factorbook Download track Download number_of_intervals 1,294 bp_covered 18,116 output_type transcription factor binding sites all genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR321BJQ biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EHMT2 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 17,695 downloaded_date 07/10/2024 release_date 11/23/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF399ZUJ_TGTCCADGGTGCTG_sorted.bed.gz processed_file_md5 91604a46d062fa01c3d3f8b37a0f24cd wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF399ZUJ_TGTCCADGGTGCTG_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF399ZUJ_TGTCCADGGTGCTG_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF399ZUJ_TGTCCADGGTGCTG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF399ZUJ_TGTCCADGGTGCTG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 ccc67afc82f7f6f50713ddd0d6fbcd18 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens A549;Original_cell_type=A549;Lab=Bradley Bernstein, Broad;System=respiratory system;ENCODE_BED_id=ENCFF399ZUJ;ENCODE_bigBed_id=ENCFF026GWM;PMID=34755879;Motif_sequence=TGTCCADGGTGCTG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name Factorbook A549 (repl. 1, 2) Motif finding EHMT2 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR321BJQ] [Life stage: Adult] [TFBS]
EHMT2 • A549 NGFTB7QEVLD5ZB • Factorbook34755879 Motif finding A549 TFBS Show metadata Download track Track metadata identifier NGFTB7QEVLD5ZB data_source Factorbook Download track Download number_of_intervals 762 bp_covered 16,002 output_type transcription factor binding sites significant genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR321BJQ biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EHMT2 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 13,164 downloaded_date 07/10/2024 release_date 11/23/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF399ZUJ_TTCAGCACCAYGGACAGCDCC_filtered.bed.gz processed_file_md5 77b4355ed0d6a98717351e6fc3e15211 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF399ZUJ_TTCAGCACCAYGGACAGCDCC_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF399ZUJ_TTCAGCACCAYGGACAGCDCC_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF399ZUJ_TTCAGCACCAYGGACAGCDCC.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF399ZUJ_TTCAGCACCAYGGACAGCDCC.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 6b9d08fa517982b1f9f9430b479e3143 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens A549;Original_cell_type=A549;Lab=Bradley Bernstein, Broad;System=respiratory system;ENCODE_BED_id=ENCFF399ZUJ;ENCODE_bigBed_id=ENCFF026GWM;PMID=34755879;Motif_sequence=TTCAGCACCAYGGACAGCDCC;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name Factorbook A549 (repl. 1, 2) Motif finding EHMT2 transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR321BJQ] [Life stage: Adult] [TFBS]
EHMT2 • A549 NGFTBHUQTP5BIJ • Factorbook34755879 Motif finding A549 TFBS Show metadata Download track Track metadata identifier NGFTBHUQTP5BIJ data_source Factorbook Download track Download number_of_intervals 1,334 bp_covered 28,014 output_type transcription factor binding sites all genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR321BJQ biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EHMT2 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 25,902 downloaded_date 07/10/2024 release_date 11/23/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF399ZUJ_TTCAGCACCAYGGACAGCDCC_sorted.bed.gz processed_file_md5 eacdc991f1f6d0299d57ede92c5707f7 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF399ZUJ_TTCAGCACCAYGGACAGCDCC_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF399ZUJ_TTCAGCACCAYGGACAGCDCC_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF399ZUJ_TTCAGCACCAYGGACAGCDCC.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF399ZUJ_TTCAGCACCAYGGACAGCDCC.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 6b9d08fa517982b1f9f9430b479e3143 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens A549;Original_cell_type=A549;Lab=Bradley Bernstein, Broad;System=respiratory system;ENCODE_BED_id=ENCFF399ZUJ;ENCODE_bigBed_id=ENCFF026GWM;PMID=34755879;Motif_sequence=TTCAGCACCAYGGACAGCDCC;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name Factorbook A549 (repl. 1, 2) Motif finding EHMT2 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR321BJQ] [Life stage: Adult] [TFBS]
EHMT2 • HepG2 NGFTBLY5K4T5YW • Factorbook34755879 Motif finding HepG2 TFBS Show metadata Download track Track metadata identifier NGFTBLY5K4T5YW data_source Factorbook Download track Download number_of_intervals 1,136 bp_covered 23,856 output_type transcription factor binding sites significant genome_build hg38 cell_type HepG2 biosample_type Cell line biosample_term_id EFO:0001187 tissue_category Liver encode_experiment_id ENCSR376FMN biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EHMT2 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 14,952 downloaded_date 07/10/2024 release_date 08/12/2017 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF855VUF_KGGHGCTGTCCATGGTGCTGA_filtered.bed.gz processed_file_md5 e28f7d75a6913553addf410e43b3f119 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF855VUF_KGGHGCTGTCCATGGTGCTGA_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF855VUF_KGGHGCTGTCCATGGTGCTGA_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF855VUF_KGGHGCTGTCCATGGTGCTGA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF855VUF_KGGHGCTGTCCATGGTGCTGA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 4ddd9f8f3c435bc4d39d2a60d67c9d9d data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens HepG2;Original_cell_type=HepG2;Lab=Bradley Bernstein, Broad;System=exocrine system,endocrine system,digestive system;ENCODE_BED_id=ENCFF855VUF;ENCODE_bigBed_id=ENCFF004KYI;PMID=34755879;Motif_sequence=KGGHGCTGTCCATGGTGCTGA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001187;is_hg38_lifted=no system_category Digestive life_stage Child track_name Factorbook HepG2 (repl. 1, 2) Motif finding EHMT2 transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR376FMN] [Life stage: Child] [TFBS]
EHMT2 • HepG2 NGFTBMG5DH3ZBK • Factorbook34755879 Motif finding HepG2 TFBS Show metadata Download track Track metadata identifier NGFTBMG5DH3ZBK data_source Factorbook Download track Download number_of_intervals 5,018 bp_covered 85,306 output_type transcription factor binding sites all genome_build hg38 cell_type HepG2 biosample_type Cell line biosample_term_id EFO:0001187 tissue_category Liver encode_experiment_id ENCSR376FMN biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EHMT2 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 70,651 downloaded_date 07/10/2024 release_date 08/12/2017 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF855VUF_CTGTCCRTGGTGCTGAA_sorted.bed.gz processed_file_md5 51fb1d2ba7ebf2cbf80ac7a28c2f05b5 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF855VUF_CTGTCCRTGGTGCTGAA_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF855VUF_CTGTCCRTGGTGCTGAA_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF855VUF_CTGTCCRTGGTGCTGAA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF855VUF_CTGTCCRTGGTGCTGAA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 0e8e1777b35cd2f673d11b0e67de29f3 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens HepG2;Original_cell_type=HepG2;Lab=Bradley Bernstein, Broad;System=exocrine system,endocrine system,digestive system;ENCODE_BED_id=ENCFF855VUF;ENCODE_bigBed_id=ENCFF004KYI;PMID=34755879;Motif_sequence=CTGTCCRTGGTGCTGAA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001187;is_hg38_lifted=no system_category Digestive life_stage Child track_name Factorbook HepG2 (repl. 1, 2) Motif finding EHMT2 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR376FMN] [Life stage: Child] [TFBS]
EHMT2 • K562 NGFTBNPTJRPBV7 • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBNPTJRPBV7 data_source Factorbook Download track Download number_of_intervals 4,996 bp_covered 104,916 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR175EOM biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EHMT2 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 97,555 downloaded_date 07/10/2024 release_date 02/13/2018 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF189OHQ_MYYNRVRBBNTGGACAGCTCC_sorted.bed.gz processed_file_md5 385ced0a873d6bbf04ed791455dfc694 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF189OHQ_MYYNRVRBBNTGGACAGCTCC_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF189OHQ_MYYNRVRBBNTGGACAGCTCC_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF189OHQ_MYYNRVRBBNTGGACAGCTCC.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF189OHQ_MYYNRVRBBNTGGACAGCTCC.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 48e56ef1595496595f6dda573c6bbdf6 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF189OHQ;ENCODE_bigBed_id=ENCFF053BWO;PMID=34755879;Motif_sequence=MYYNRVRBBNTGGACAGCTCC;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding EHMT2 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR175EOM] [Life stage: Adult] [TFBS]
EHMT2 • K562 NGFTBQGSB6H6IK • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBQGSB6H6IK data_source Factorbook Download track Download number_of_intervals 293 bp_covered 4,395 output_type transcription factor binding sites significant genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR175EOM biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EHMT2 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 3,333 downloaded_date 07/10/2024 release_date 02/13/2018 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF189OHQ_CAGCACCATGGACAG_filtered.bed.gz processed_file_md5 ba21be65a54864ac5823caec2be2aa71 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF189OHQ_CAGCACCATGGACAG_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF189OHQ_CAGCACCATGGACAG_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF189OHQ_CAGCACCATGGACAG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF189OHQ_CAGCACCATGGACAG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 afb601c11c39f195e534a1c7aa6121da data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF189OHQ;ENCODE_bigBed_id=ENCFF053BWO;PMID=34755879;Motif_sequence=CAGCACCATGGACAG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding EHMT2 transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR175EOM] [Life stage: Adult] [TFBS]
EHMT2 • K562 NGFTBQINBSZRST • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBQINBSZRST data_source Factorbook Download track Download number_of_intervals 7 bp_covered 147 output_type transcription factor binding sites significant genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR175EOM biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EHMT2 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 470 downloaded_date 07/10/2024 release_date 02/13/2018 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF189OHQ_MYYNRVRBBNTGGACAGCTCC_filtered.bed.gz processed_file_md5 b7ba4f178535c6291178acffc54f8acd wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF189OHQ_MYYNRVRBBNTGGACAGCTCC_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF189OHQ_MYYNRVRBBNTGGACAGCTCC_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF189OHQ_MYYNRVRBBNTGGACAGCTCC.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF189OHQ_MYYNRVRBBNTGGACAGCTCC.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 48e56ef1595496595f6dda573c6bbdf6 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF189OHQ;ENCODE_bigBed_id=ENCFF053BWO;PMID=34755879;Motif_sequence=MYYNRVRBBNTGGACAGCTCC;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding EHMT2 transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR175EOM] [Life stage: Adult] [TFBS]
EHMT2 • A549 NGFTBQL2IHVDNL • Factorbook34755879 Motif finding A549 TFBS Show metadata Download track Track metadata identifier NGFTBQL2IHVDNL data_source Factorbook Download track Download number_of_intervals 817 bp_covered 23,693 output_type transcription factor binding sites all genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR321BJQ biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EHMT2 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 17,976 downloaded_date 07/10/2024 release_date 11/23/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF399ZUJ_YTTCAGCACYNVRGBKBTGGACAGCTCCH_sorted.bed.gz processed_file_md5 66f28e345004d842dbce762d4526ca4a wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF399ZUJ_YTTCAGCACYNVRGBKBTGGACAGCTCCH_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF399ZUJ_YTTCAGCACYNVRGBKBTGGACAGCTCCH_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF399ZUJ_YTTCAGCACYNVRGBKBTGGACAGCTCCH.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF399ZUJ_YTTCAGCACYNVRGBKBTGGACAGCTCCH.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 7050fd4cba87a66b54671e32a3dd2ff1 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens A549;Original_cell_type=A549;Lab=Bradley Bernstein, Broad;System=respiratory system;ENCODE_BED_id=ENCFF399ZUJ;ENCODE_bigBed_id=ENCFF026GWM;PMID=34755879;Motif_sequence=YTTCAGCACYNVRGBKBTGGACAGCTCCH;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name Factorbook A549 (repl. 1, 2) Motif finding EHMT2 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR321BJQ] [Life stage: Adult] [TFBS]
EHMT2 • HepG2 NGFTBRG6S6PT35 • Factorbook34755879 Motif finding HepG2 TFBS Show metadata Download track Track metadata identifier NGFTBRG6S6PT35 data_source Factorbook Download track Download number_of_intervals 3,278 bp_covered 36,058 output_type transcription factor binding sites all genome_build hg38 cell_type HepG2 biosample_type Cell line biosample_term_id EFO:0001187 tissue_category Liver encode_experiment_id ENCSR376FMN biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EHMT2 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 38,713 downloaded_date 07/10/2024 release_date 08/12/2017 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF855VUF_GGAGCTGTCCA_sorted.bed.gz processed_file_md5 9c8e6a114aaff3dd45ed1537316e06dd wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF855VUF_GGAGCTGTCCA_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF855VUF_GGAGCTGTCCA_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF855VUF_GGAGCTGTCCA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF855VUF_GGAGCTGTCCA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 e98da00ddecfda2b0e61a331119ba04c data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens HepG2;Original_cell_type=HepG2;Lab=Bradley Bernstein, Broad;System=exocrine system,endocrine system,digestive system;ENCODE_BED_id=ENCFF855VUF;ENCODE_bigBed_id=ENCFF004KYI;PMID=34755879;Motif_sequence=GGAGCTGTCCA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001187;is_hg38_lifted=no system_category Digestive life_stage Child track_name Factorbook HepG2 (repl. 1, 2) Motif finding EHMT2 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR376FMN] [Life stage: Child] [TFBS]
EHMT2 • A549 NGFTBTASTOBA22 • Factorbook34755879 Motif finding A549 TFBS Show metadata Download track Track metadata identifier NGFTBTASTOBA22 data_source Factorbook Download track Download number_of_intervals 57 bp_covered 1,653 output_type transcription factor binding sites significant genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR321BJQ biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EHMT2 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 1,469 downloaded_date 07/10/2024 release_date 11/23/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF399ZUJ_YTTCAGCACYNVRGBKBTGGACAGCTCCH_filtered.bed.gz processed_file_md5 c2880a48abf9a2cc5b740e4c2107d82a wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF399ZUJ_YTTCAGCACYNVRGBKBTGGACAGCTCCH_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF399ZUJ_YTTCAGCACYNVRGBKBTGGACAGCTCCH_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF399ZUJ_YTTCAGCACYNVRGBKBTGGACAGCTCCH.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF399ZUJ_YTTCAGCACYNVRGBKBTGGACAGCTCCH.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 7050fd4cba87a66b54671e32a3dd2ff1 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens A549;Original_cell_type=A549;Lab=Bradley Bernstein, Broad;System=respiratory system;ENCODE_BED_id=ENCFF399ZUJ;ENCODE_bigBed_id=ENCFF026GWM;PMID=34755879;Motif_sequence=YTTCAGCACYNVRGBKBTGGACAGCTCCH;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name Factorbook A549 (repl. 1, 2) Motif finding EHMT2 transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR321BJQ] [Life stage: Adult] [TFBS]
EHMT2 • A549 NGFTBTEMFQ7RBC • Factorbook34755879 Motif finding A549 TFBS Show metadata Download track Track metadata identifier NGFTBTEMFQ7RBC data_source Factorbook Download track Download number_of_intervals 969 bp_covered 14,535 output_type transcription factor binding sites all genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR321BJQ biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EHMT2 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 15,112 downloaded_date 07/10/2024 release_date 11/23/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF399ZUJ_GSYGCCATYTTGNAT_sorted.bed.gz processed_file_md5 682fed2a988941a337335baf3d7ad88f wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF399ZUJ_GSYGCCATYTTGNAT_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF399ZUJ_GSYGCCATYTTGNAT_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF399ZUJ_GSYGCCATYTTGNAT.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF399ZUJ_GSYGCCATYTTGNAT.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 4feaff05ff47832deb803476003851c5 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens A549;Original_cell_type=A549;Lab=Bradley Bernstein, Broad;System=respiratory system;ENCODE_BED_id=ENCFF399ZUJ;ENCODE_bigBed_id=ENCFF026GWM;PMID=34755879;Motif_sequence=GSYGCCATYTTGNAT;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name Factorbook A549 (repl. 1, 2) Motif finding EHMT2 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR321BJQ] [Life stage: Adult] [TFBS]
EHMT2 • HepG2 NGFTBVKJE7OTUV • Factorbook34755879 Motif finding HepG2 TFBS Show metadata Download track Track metadata identifier NGFTBVKJE7OTUV data_source Factorbook Download track Download number_of_intervals 4,377 bp_covered 91,917 output_type transcription factor binding sites all genome_build hg38 cell_type HepG2 biosample_type Cell line biosample_term_id EFO:0001187 tissue_category Liver encode_experiment_id ENCSR376FMN biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EHMT2 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 75,165 downloaded_date 07/10/2024 release_date 08/12/2017 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF855VUF_KGGHGCTGTCCATGGTGCTGA_sorted.bed.gz processed_file_md5 8716b02517e9963dabff85eade218a8a wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF855VUF_KGGHGCTGTCCATGGTGCTGA_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF855VUF_KGGHGCTGTCCATGGTGCTGA_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF855VUF_KGGHGCTGTCCATGGTGCTGA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF855VUF_KGGHGCTGTCCATGGTGCTGA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 4ddd9f8f3c435bc4d39d2a60d67c9d9d data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens HepG2;Original_cell_type=HepG2;Lab=Bradley Bernstein, Broad;System=exocrine system,endocrine system,digestive system;ENCODE_BED_id=ENCFF855VUF;ENCODE_bigBed_id=ENCFF004KYI;PMID=34755879;Motif_sequence=KGGHGCTGTCCATGGTGCTGA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001187;is_hg38_lifted=no system_category Digestive life_stage Child track_name Factorbook HepG2 (repl. 1, 2) Motif finding EHMT2 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR376FMN] [Life stage: Child] [TFBS]
EHMT2 • HepG2 NGFTBZ2KI2BBHP • Factorbook34755879 Motif finding HepG2 TFBS Show metadata Download track Track metadata identifier NGFTBZ2KI2BBHP data_source Factorbook Download track Download number_of_intervals 599 bp_covered 10,183 output_type transcription factor binding sites significant genome_build hg38 cell_type HepG2 biosample_type Cell line biosample_term_id EFO:0001187 tissue_category Liver encode_experiment_id ENCSR376FMN biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EHMT2 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 5,910 downloaded_date 07/10/2024 release_date 08/12/2017 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF855VUF_CTGTCCRTGGTGCTGAA_filtered.bed.gz processed_file_md5 5f30dcd7373cc37f59157c096384f59b wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF855VUF_CTGTCCRTGGTGCTGAA_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF855VUF_CTGTCCRTGGTGCTGAA_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF855VUF_CTGTCCRTGGTGCTGAA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF855VUF_CTGTCCRTGGTGCTGAA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 0e8e1777b35cd2f673d11b0e67de29f3 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens HepG2;Original_cell_type=HepG2;Lab=Bradley Bernstein, Broad;System=exocrine system,endocrine system,digestive system;ENCODE_BED_id=ENCFF855VUF;ENCODE_bigBed_id=ENCFF004KYI;PMID=34755879;Motif_sequence=CTGTCCRTGGTGCTGAA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001187;is_hg38_lifted=no system_category Digestive life_stage Child track_name Factorbook HepG2 (repl. 1, 2) Motif finding EHMT2 transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR376FMN] [Life stage: Child] [TFBS]
EIF3D • HepG2 NGENCK3FXIVZE7 • ENCODE22955616 | 41168159 | 31713622 eCLIP HepG2 RNA binding Show metadata Download track Track metadata identifier NGENCK3FXIVZE7 data_source ENCODE Download track Download number_of_intervals 21,569 bp_covered 1,306,786 output_type peaks genome_build hg38 cell_type HepG2 biosample_type Cell line biosample_term_id EFO:0001187 tissue_category Liver encode_experiment_id ENCSR041NUV biological_replicate 2 technical_replicate 2_1 antibody EIF3D assay eCLIP file_format bed narrowPeak file_size 406,758 downloaded_date 06/04/2018 release_date 12/03/2016 date_added_to_filer 08/22/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/eCLIP/narrowpeak/hg38/ENCFF733BQQ.bed.gz processed_file_md5 9c2ce42d83e0e3a16cc9bbd5052b7f4c wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/eCLIP/narrowpeak/hg38/ENCFF733BQQ.bed.gz -P GADB/Annotationtracks/ENCODE/data/eCLIP/narrowpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/eCLIP/narrowpeak/hg38/ENCFF733BQQ.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/eCLIP/narrowpeak/hg38/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF733BQQ/@@download/ENCFF733BQQ.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF733BQQ.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 bea0cb2e3f28982dd8e44c0be9a1fa00 data_category RNA binding Genomic feature type eCLIP peaks track_description version=2024;Biosample_summary=Homo sapiens HepG2;Lab=Gene Yeo, UCSD;ENCODE_internal_tags=ENCORE,ENCYCLOPEDIAv2;Life_stage_age=child 15 years;Reference=PMID:32252787;External_resources=RBPImage:EIF3D,GEO:GSE91432;Project=ENCODE;Award=U54HG007005;Experiment_date_released=2016-04-26;Submitted_track_name=625_02.basedon_625_02.peaks.l2inputnormnew.bed.compressed.bed.narrowPeak.bed.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=HepG2;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_system_slims=exocrine system,digestive system,endocrine system;ENCODE_biosample_term_synonyms=HepG2 cell,Hep-G2;Analysis_title=Lab custom GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001187;is_hg38_lifted=no;narrowPeak_filter=pValueLog10 system_category Digestive life_stage Child track_name ENCODE HepG2 (repl. 2) eCLIP EIF3D peaks (narrowPeak) [Experiment: ENCSR041NUV] [Life stage: Child] [RNA binding]
EIF3D • HepG2 NGENCM4FLY6ZIG • ENCODE22955616 | 41168159 | 31713622 eCLIP HepG2 RNA binding Show metadata Download track Track metadata identifier NGENCM4FLY6ZIG data_source ENCODE Download track Download number_of_intervals 18,945 bp_covered 1,083,282 output_type peaks genome_build hg38 cell_type HepG2 biosample_type Cell line biosample_term_id EFO:0001187 tissue_category Liver encode_experiment_id ENCSR041NUV biological_replicate 1 technical_replicate 1_1 antibody EIF3D assay eCLIP file_format bed narrowPeak file_size 369,169 downloaded_date 06/04/2018 release_date 12/03/2016 date_added_to_filer 08/22/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/eCLIP/narrowpeak/hg38/ENCFF104YAE.bed.gz processed_file_md5 edfcebf84decf5047a141242026eb26d wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/eCLIP/narrowpeak/hg38/ENCFF104YAE.bed.gz -P GADB/Annotationtracks/ENCODE/data/eCLIP/narrowpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/eCLIP/narrowpeak/hg38/ENCFF104YAE.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/eCLIP/narrowpeak/hg38/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF104YAE/@@download/ENCFF104YAE.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF104YAE.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 8f3e42175a3e2f699c365dc96a570156 data_category RNA binding Genomic feature type eCLIP peaks track_description version=2024;Biosample_summary=Homo sapiens HepG2;Lab=Gene Yeo, UCSD;ENCODE_internal_tags=ENCORE,ENCYCLOPEDIAv2;Life_stage_age=child 15 years;Reference=PMID:32252787;External_resources=RBPImage:EIF3D,GEO:GSE91432;Project=ENCODE;Award=U54HG007005;Experiment_date_released=2016-04-26;Submitted_track_name=625_01.basedon_625_01.peaks.l2inputnormnew.bed.compressed.bed.narrowPeak.bed.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=HepG2;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_system_slims=exocrine system,digestive system,endocrine system;ENCODE_biosample_term_synonyms=HepG2 cell,Hep-G2;Analysis_title=Lab custom GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001187;is_hg38_lifted=no;narrowPeak_filter=pValueLog10 system_category Digestive life_stage Child track_name ENCODE HepG2 (repl. 1) eCLIP EIF3D peaks (narrowPeak) [Experiment: ENCSR041NUV] [Life stage: Child] [RNA binding]
EIF3G • K562 NGENCJHOHZVABF • ENCODE22955616 | 41168159 | 31713622 eCLIP K562 RNA binding Show metadata Download track Track metadata identifier NGENCJHOHZVABF data_source ENCODE Download track Download number_of_intervals 2,256 bp_covered 126,682 output_type peaks genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR023PKW biological_replicate 1 technical_replicate 1_1 antibody EIF3G assay eCLIP file_format bed narrowPeak file_size 39,782 downloaded_date 06/10/2020 release_date 04/29/2018 date_added_to_filer 08/22/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/eCLIP/narrowpeak/hg38/ENCFF827LVH.bed.gz processed_file_md5 18caf555de0c265dd5919d3cb95bf1b1 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/eCLIP/narrowpeak/hg38/ENCFF827LVH.bed.gz -P GADB/Annotationtracks/ENCODE/data/eCLIP/narrowpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/eCLIP/narrowpeak/hg38/ENCFF827LVH.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/eCLIP/narrowpeak/hg38/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF827LVH/@@download/ENCFF827LVH.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF827LVH.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 6b5c4af5a59c20d9425cb56b572ac81a data_category RNA binding Genomic feature type eCLIP peaks track_description version=2024;Biosample_summary=Homo sapiens K562;Lab=Gene Yeo, UCSD;ENCODE_internal_tags=ENCORE;Life_stage_age=adult 53 years;Reference=PMID:32252787;External_resources=GEO:GSE176676;Project=ENCODE;Award=U41HG009889;Experiment_date_released=2018-08-30;Submitted_track_name=646_01.basedon_646_01.peaks.l2inputnormnew.bed.compressed.bed.narrowPeak.bed.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=leukocyte,cancer cell,hematopoietic cell;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=K-562, K562 cell,K-562 cell;Analysis_title=Lab custom GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no;narrowPeak_filter=pValueLog10 system_category Cardiovascular life_stage Adult track_name ENCODE K562 (repl. 1) eCLIP EIF3G peaks (narrowPeak) [Experiment: ENCSR023PKW] [Life stage: Adult] [RNA binding]