ELK1 • GM12878 NGFTB2EVSZJZVR • Factorbook34755879 Motif finding GM12878 TFBS Show metadata Download track Track metadata identifier NGFTB2EVSZJZVR data_source Factorbook Download track Download number_of_intervals 312 bp_covered 7,800 output_type transcription factor binding sites significant genome_build hg38 cell_type GM12878 biosample_type Cell line biosample_term_id EFO:0002784 tissue_category Blood encode_experiment_id ENCSR000DZB biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ELK1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 6,297 downloaded_date 07/10/2024 release_date 05/14/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF164MPE_CGGRGCMTKCTGGGARTTGTAGTYC_filtered.bed.gz processed_file_md5 77ba3351d67def66421e5acaae6c7ac1 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF164MPE_CGGRGCMTKCTGGGARTTGTAGTYC_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF164MPE_CGGRGCMTKCTGGGARTTGTAGTYC_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF164MPE_CGGRGCMTKCTGGGARTTGTAGTYC.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF164MPE_CGGRGCMTKCTGGGARTTGTAGTYC.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 52b413195c57f4a1318df6a6c3f03f8a data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens GM12878;Original_cell_type=GM12878;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF164MPE;ENCODE_bigBed_id=ENCFF807NFQ;PMID=34755879;Motif_sequence=CGGRGCMTKCTGGGARTTGTAGTYC;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002784;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name Factorbook GM12878 (repl. 1, 2) Motif finding ELK1 transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR000DZB] [TFBS]
ELK1 • HeLa-S3 NGFTB3PGL5CSPG • Factorbook34755879 Motif finding HeLa-S3 TFBS Show metadata Download track Track metadata identifier NGFTB3PGL5CSPG data_source Factorbook Download track Download number_of_intervals 5,581 bp_covered 78,134 output_type transcription factor binding sites all genome_build hg38 cell_type HeLa-S3 biosample_type Cell line biosample_term_id EFO:0002791 tissue_category Female Reproductive encode_experiment_id ENCSR000ECI biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ELK1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 94,161 downloaded_date 07/10/2024 release_date 05/14/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF279OML_VRCCGGAAGTGVSS_sorted.bed.gz processed_file_md5 51abb1436e2209c1936769f3607265fc wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF279OML_VRCCGGAAGTGVSS_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF279OML_VRCCGGAAGTGVSS_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF279OML_VRCCGGAAGTGVSS.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF279OML_VRCCGGAAGTGVSS.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 876a7dfba79622fe4d811c09bffde956 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens HeLa-S3;Original_cell_type=HeLa-S3;Lab=Michael Snyder, Stanford;System=reproductive system;ENCODE_BED_id=ENCFF279OML;ENCODE_bigBed_id=ENCFF608AEL;PMID=34755879;Motif_sequence=VRCCGGAAGTGVSS;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002791;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook HeLa-S3 (repl. 1, 2) Motif finding ELK1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000ECI] [Life stage: Adult] [TFBS]
ELK1 • HeLa-S3 NGFTB5CYXBQUFL • Factorbook34755879 Motif finding HeLa-S3 TFBS Show metadata Download track Track metadata identifier NGFTB5CYXBQUFL data_source Factorbook Download track Download number_of_intervals 4,200 bp_covered 33,600 output_type transcription factor binding sites all genome_build hg38 cell_type HeLa-S3 biosample_type Cell line biosample_term_id EFO:0002791 tissue_category Female Reproductive encode_experiment_id ENCSR000ECI biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ELK1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 46,555 downloaded_date 07/10/2024 release_date 05/14/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF279OML_CCGGAAGY_sorted.bed.gz processed_file_md5 14e041f90a44240add86585fae4e963d wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF279OML_CCGGAAGY_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF279OML_CCGGAAGY_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF279OML_CCGGAAGY.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF279OML_CCGGAAGY.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 e45676b4ae9c75107df1922d76cfba1d data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens HeLa-S3;Original_cell_type=HeLa-S3;Lab=Michael Snyder, Stanford;System=reproductive system;ENCODE_BED_id=ENCFF279OML;ENCODE_bigBed_id=ENCFF608AEL;PMID=34755879;Motif_sequence=CCGGAAGY;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002791;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook HeLa-S3 (repl. 1, 2) Motif finding ELK1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000ECI] [Life stage: Adult] [TFBS]
ELK1 • K562 NGFTBB3OYPJ5WT • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBB3OYPJ5WT data_source Factorbook Download track Download number_of_intervals 3,407 bp_covered 37,477 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR000EFU biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ELK1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 51,370 downloaded_date 07/10/2024 release_date 08/20/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF715WGN_VRCCGGAAGTG_sorted.bed.gz processed_file_md5 8edbf72249ba1b26722bbe2574355854 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF715WGN_VRCCGGAAGTG_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF715WGN_VRCCGGAAGTG_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF715WGN_VRCCGGAAGTG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF715WGN_VRCCGGAAGTG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 52bd98f6eab64b705a1d8f8c152f5932 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF715WGN;ENCODE_bigBed_id=ENCFF913QBM;PMID=34755879;Motif_sequence=VRCCGGAAGTG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding ELK1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000EFU] [Life stage: Adult] [TFBS]
ELK1 • K562 NGFTBBTSY22OSE • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBBTSY22OSE data_source Factorbook Download track Download number_of_intervals 118 bp_covered 2,950 output_type transcription factor binding sites significant genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR000EFU biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ELK1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 2,345 downloaded_date 07/10/2024 release_date 08/20/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF715WGN_CCCTATATGGTCTAAAAAGGGGAGG_filtered.bed.gz processed_file_md5 43faef3fe5a7d95d63d8496f890b52d3 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF715WGN_CCCTATATGGTCTAAAAAGGGGAGG_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF715WGN_CCCTATATGGTCTAAAAAGGGGAGG_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF715WGN_CCCTATATGGTCTAAAAAGGGGAGG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF715WGN_CCCTATATGGTCTAAAAAGGGGAGG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 c8cfc07121f17765975c2a496c8e4861 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF715WGN;ENCODE_bigBed_id=ENCFF913QBM;PMID=34755879;Motif_sequence=CCCTATATGGTCTAAAAAGGGGAGG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding ELK1 transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR000EFU] [Life stage: Adult] [TFBS]
ELK1 • GM12878 NGFTBF2P74NTO4 • Factorbook34755879 Motif finding GM12878 TFBS Show metadata Download track Track metadata identifier NGFTBF2P74NTO4 data_source Factorbook Download track Download number_of_intervals 4,916 bp_covered 39,328 output_type transcription factor binding sites all genome_build hg38 cell_type GM12878 biosample_type Cell line biosample_term_id EFO:0002784 tissue_category Blood encode_experiment_id ENCSR000DZB biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ELK1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 53,981 downloaded_date 07/10/2024 release_date 05/14/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF164MPE_CCGGAAGT_sorted.bed.gz processed_file_md5 cbd3dad0fa22de4053b0e2d759f6f1fe wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF164MPE_CCGGAAGT_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF164MPE_CCGGAAGT_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF164MPE_CCGGAAGT.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF164MPE_CCGGAAGT.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 139d7f40f88ca5cb87b3864ab46404c4 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens GM12878;Original_cell_type=GM12878;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF164MPE;ENCODE_bigBed_id=ENCFF807NFQ;PMID=34755879;Motif_sequence=CCGGAAGT;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002784;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name Factorbook GM12878 (repl. 1, 2) Motif finding ELK1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000DZB] [TFBS]
ELK1 • MCF-7 NGFTBFPO3TQ4WH • Factorbook34755879 Motif finding MCF-7 TFBS Show metadata Download track Track metadata identifier NGFTBFPO3TQ4WH data_source Factorbook Download track Download number_of_intervals 5,139 bp_covered 41,112 output_type transcription factor binding sites all genome_build hg38 cell_type MCF-7 biosample_type Cell line biosample_term_id EFO:0001203 tissue_category Breast encode_experiment_id ENCSR382WLL biological_replicate 1, 3 technical_replicate 1_1, 3_1 antibody ELK1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 54,051 downloaded_date 07/10/2024 release_date 02/16/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF427XNV_RCTTCCGG_sorted.bed.gz processed_file_md5 aecad23fe08e4e657b7547508fb64f47 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF427XNV_RCTTCCGG_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF427XNV_RCTTCCGG_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF427XNV_RCTTCCGG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF427XNV_RCTTCCGG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 c310621d8c108321dd858665e2f7d783 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens MCF-7;Original_cell_type=MCF-7;Lab=Michael Snyder, Stanford;System=exocrine system,integumental system;ENCODE_BED_id=ENCFF427XNV;ENCODE_bigBed_id=ENCFF013WSV;PMID=34755879;Motif_sequence=RCTTCCGG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001203;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook MCF-7 (repl. 1, 3) Motif finding ELK1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR382WLL] [Life stage: Adult] [TFBS]
ELK1 • GM12878 NGFTBFUTB44DIT • Factorbook34755879 Motif finding GM12878 TFBS Show metadata Download track Track metadata identifier NGFTBFUTB44DIT data_source Factorbook Download track Download number_of_intervals 6,252 bp_covered 68,772 output_type transcription factor binding sites all genome_build hg38 cell_type GM12878 biosample_type Cell line biosample_term_id EFO:0002784 tissue_category Blood encode_experiment_id ENCSR000DZB biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ELK1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 91,129 downloaded_date 07/10/2024 release_date 05/14/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF164MPE_BCACTTCCGGY_sorted.bed.gz processed_file_md5 b2b17e3d381f65785f8843b357db6f7b wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF164MPE_BCACTTCCGGY_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF164MPE_BCACTTCCGGY_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF164MPE_BCACTTCCGGY.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF164MPE_BCACTTCCGGY.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 c5129c45e97a060d37f92448dd9ad6c2 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens GM12878;Original_cell_type=GM12878;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF164MPE;ENCODE_bigBed_id=ENCFF807NFQ;PMID=34755879;Motif_sequence=BCACTTCCGGY;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002784;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name Factorbook GM12878 (repl. 1, 2) Motif finding ELK1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000DZB] [TFBS]
ELK1 • MCF-7 NGFTBH56P6EM2J • Factorbook34755879 Motif finding MCF-7 TFBS Show metadata Download track Track metadata identifier NGFTBH56P6EM2J data_source Factorbook Download track Download number_of_intervals 828 bp_covered 12,420 output_type transcription factor binding sites all genome_build hg38 cell_type MCF-7 biosample_type Cell line biosample_term_id EFO:0001203 tissue_category Breast encode_experiment_id ENCSR382WLL biological_replicate 1, 3 technical_replicate 1_1, 3_1 antibody ELK1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 13,879 downloaded_date 07/10/2024 release_date 02/16/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF427XNV_YHTGMCCATATAWGG_sorted.bed.gz processed_file_md5 19444c89057b64ba07fd9bc3fd90134b wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF427XNV_YHTGMCCATATAWGG_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF427XNV_YHTGMCCATATAWGG_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF427XNV_YHTGMCCATATAWGG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF427XNV_YHTGMCCATATAWGG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 0434581d8233c2a5fda182894f0ce0e0 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens MCF-7;Original_cell_type=MCF-7;Lab=Michael Snyder, Stanford;System=exocrine system,integumental system;ENCODE_BED_id=ENCFF427XNV;ENCODE_bigBed_id=ENCFF013WSV;PMID=34755879;Motif_sequence=YHTGMCCATATAWGG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001203;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook MCF-7 (repl. 1, 3) Motif finding ELK1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR382WLL] [Life stage: Adult] [TFBS]
ELK1 • K562 NGFTBIQGMET364 • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBIQGMET364 data_source Factorbook Download track Download number_of_intervals 111 bp_covered 3,330 output_type transcription factor binding sites significant genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR000EFU biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ELK1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 2,488 downloaded_date 07/10/2024 release_date 08/20/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF715WGN_GCCATGACAGTTTACAAATGCCATGGCAAC_filtered.bed.gz processed_file_md5 d6beea748c307b918012903ee79c8515 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF715WGN_GCCATGACAGTTTACAAATGCCATGGCAAC_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF715WGN_GCCATGACAGTTTACAAATGCCATGGCAAC_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF715WGN_GCCATGACAGTTTACAAATGCCATGGCAAC.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF715WGN_GCCATGACAGTTTACAAATGCCATGGCAAC.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 6546093e8807961d2e7b3351518aca73 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF715WGN;ENCODE_bigBed_id=ENCFF913QBM;PMID=34755879;Motif_sequence=GCCATGACAGTTTACAAATGCCATGGCAAC;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding ELK1 transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR000EFU] [Life stage: Adult] [TFBS]
ELK1 • K562 NGFTBJ2MR2YAM4 • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBJ2MR2YAM4 data_source Factorbook Download track Download number_of_intervals 489 bp_covered 6,357 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR000EFU biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ELK1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 7,635 downloaded_date 07/10/2024 release_date 08/20/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF715WGN_TGMCCWTATWWGG_sorted.bed.gz processed_file_md5 1e475f25d1c27119e1634b9394996a75 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF715WGN_TGMCCWTATWWGG_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF715WGN_TGMCCWTATWWGG_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF715WGN_TGMCCWTATWWGG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF715WGN_TGMCCWTATWWGG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 75b29bcf9579a81358857b994e211cd6 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF715WGN;ENCODE_bigBed_id=ENCFF913QBM;PMID=34755879;Motif_sequence=TGMCCWTATWWGG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding ELK1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000EFU] [Life stage: Adult] [TFBS]
ELK1 • HeLa-S3 NGFTBJZIP3FBHO • Factorbook34755879 Motif finding HeLa-S3 TFBS Show metadata Download track Track metadata identifier NGFTBJZIP3FBHO data_source Factorbook Download track Download number_of_intervals 577 bp_covered 5,770 output_type transcription factor binding sites all genome_build hg38 cell_type HeLa-S3 biosample_type Cell line biosample_term_id EFO:0002791 tissue_category Female Reproductive encode_experiment_id ENCSR000ECI biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ELK1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 7,490 downloaded_date 07/10/2024 release_date 05/14/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF279OML_CCATAWAAGG_sorted.bed.gz processed_file_md5 bfa67abbe4897c0cdc957596d6556d06 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF279OML_CCATAWAAGG_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF279OML_CCATAWAAGG_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF279OML_CCATAWAAGG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF279OML_CCATAWAAGG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 0f443f091fe4e2c3382d36476d13c50f data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens HeLa-S3;Original_cell_type=HeLa-S3;Lab=Michael Snyder, Stanford;System=reproductive system;ENCODE_BED_id=ENCFF279OML;ENCODE_bigBed_id=ENCFF608AEL;PMID=34755879;Motif_sequence=CCATAWAAGG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002791;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook HeLa-S3 (repl. 1, 2) Motif finding ELK1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000ECI] [Life stage: Adult] [TFBS]
ELK1 • K562 NGFTBOI72MBSUR • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBOI72MBSUR data_source Factorbook Download track Download number_of_intervals 63 bp_covered 1,323 output_type transcription factor binding sites significant genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR000EFU biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ELK1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 1,393 downloaded_date 07/10/2024 release_date 08/20/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF715WGN_CAATTCCYRGAACTGAGGGTT_filtered.bed.gz processed_file_md5 f5690df68533629ff7620d7b9dec628e wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF715WGN_CAATTCCYRGAACTGAGGGTT_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF715WGN_CAATTCCYRGAACTGAGGGTT_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF715WGN_CAATTCCYRGAACTGAGGGTT.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF715WGN_CAATTCCYRGAACTGAGGGTT.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 8f367cbbc28a035cf4169df0db4b46f8 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF715WGN;ENCODE_bigBed_id=ENCFF913QBM;PMID=34755879;Motif_sequence=CAATTCCYRGAACTGAGGGTT;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding ELK1 transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR000EFU] [Life stage: Adult] [TFBS]
ELK1 • GM12878 NGFTBPCCBGTIZC • Factorbook34755879 Motif finding GM12878 TFBS Show metadata Download track Track metadata identifier NGFTBPCCBGTIZC data_source Factorbook Download track Download number_of_intervals 2,089 bp_covered 52,225 output_type transcription factor binding sites all genome_build hg38 cell_type GM12878 biosample_type Cell line biosample_term_id EFO:0002784 tissue_category Blood encode_experiment_id ENCSR000DZB biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ELK1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 46,286 downloaded_date 07/10/2024 release_date 05/14/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF164MPE_CGGRGCMTKCTGGGARTTGTAGTYC_sorted.bed.gz processed_file_md5 3525a645a805649e7bceb595828b141c wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF164MPE_CGGRGCMTKCTGGGARTTGTAGTYC_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF164MPE_CGGRGCMTKCTGGGARTTGTAGTYC_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF164MPE_CGGRGCMTKCTGGGARTTGTAGTYC.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF164MPE_CGGRGCMTKCTGGGARTTGTAGTYC.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 52b413195c57f4a1318df6a6c3f03f8a data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens GM12878;Original_cell_type=GM12878;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF164MPE;ENCODE_bigBed_id=ENCFF807NFQ;PMID=34755879;Motif_sequence=CGGRGCMTKCTGGGARTTGTAGTYC;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002784;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name Factorbook GM12878 (repl. 1, 2) Motif finding ELK1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000DZB] [TFBS]
ELK1 • K562 NGFTBU5RQO75ZX • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBU5RQO75ZX data_source Factorbook Download track Download number_of_intervals 393 bp_covered 9,825 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR000EFU biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ELK1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 9,036 downloaded_date 07/10/2024 release_date 08/20/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF715WGN_CCCTATATGGTCTAAAAAGGGGAGG_sorted.bed.gz processed_file_md5 56b12d812a6f8bc1da6e841ffd40c0b6 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF715WGN_CCCTATATGGTCTAAAAAGGGGAGG_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF715WGN_CCCTATATGGTCTAAAAAGGGGAGG_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF715WGN_CCCTATATGGTCTAAAAAGGGGAGG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF715WGN_CCCTATATGGTCTAAAAAGGGGAGG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 c8cfc07121f17765975c2a496c8e4861 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF715WGN;ENCODE_bigBed_id=ENCFF913QBM;PMID=34755879;Motif_sequence=CCCTATATGGTCTAAAAAGGGGAGG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding ELK1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000EFU] [Life stage: Adult] [TFBS]
ELK1 • K562 NGFTBXK4UMPPNH • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBXK4UMPPNH data_source Factorbook Download track Download number_of_intervals 368 bp_covered 11,040 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR000EFU biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ELK1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 8,342 downloaded_date 07/10/2024 release_date 08/20/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF715WGN_GCCATGACAGTTTACAAATGCCATGGCAAC_sorted.bed.gz processed_file_md5 bc344c4f7340779fa30bf103a0924e9f wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF715WGN_GCCATGACAGTTTACAAATGCCATGGCAAC_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF715WGN_GCCATGACAGTTTACAAATGCCATGGCAAC_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF715WGN_GCCATGACAGTTTACAAATGCCATGGCAAC.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF715WGN_GCCATGACAGTTTACAAATGCCATGGCAAC.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 6546093e8807961d2e7b3351518aca73 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF715WGN;ENCODE_bigBed_id=ENCFF913QBM;PMID=34755879;Motif_sequence=GCCATGACAGTTTACAAATGCCATGGCAAC;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding ELK1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000EFU] [Life stage: Adult] [TFBS]
ELK1 • MCF-7 NGFTBYAZOQC2R6 • Factorbook34755879 Motif finding MCF-7 TFBS Show metadata Download track Track metadata identifier NGFTBYAZOQC2R6 data_source Factorbook Download track Download number_of_intervals 6,057 bp_covered 66,627 output_type transcription factor binding sites all genome_build hg38 cell_type MCF-7 biosample_type Cell line biosample_term_id EFO:0001203 tissue_category Breast encode_experiment_id ENCSR382WLL biological_replicate 1, 3 technical_replicate 1_1, 3_1 antibody ELK1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 83,979 downloaded_date 07/10/2024 release_date 02/16/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF427XNV_RCCGGAAGTGV_sorted.bed.gz processed_file_md5 2bb3333af0568e65ecaeac8c6335862b wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF427XNV_RCCGGAAGTGV_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF427XNV_RCCGGAAGTGV_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF427XNV_RCCGGAAGTGV.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF427XNV_RCCGGAAGTGV.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 38a19541fa0faecfd3d4782b95a5fc05 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens MCF-7;Original_cell_type=MCF-7;Lab=Michael Snyder, Stanford;System=exocrine system,integumental system;ENCODE_BED_id=ENCFF427XNV;ENCODE_bigBed_id=ENCFF013WSV;PMID=34755879;Motif_sequence=RCCGGAAGTGV;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001203;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook MCF-7 (repl. 1, 3) Motif finding ELK1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR382WLL] [Life stage: Adult] [TFBS]
Reference annotation (ELK1) NGHOM3KJBC4HDN • HOMER20513432 Motif finding Reference annotation (ELK1) TFBS Show metadata Download track Track metadata identifier NGHOM3KJBC4HDN data_source HOMER Download track Download number_of_intervals 413,918 bp_covered 4,139,180 output_type transcription factor binding sites genome_build hg38 cell_type Not applicable biosample_type Not applicable biosample_term_id Not applicable tissue_category Not applicable encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody ELK1 assay Motif finding file_format bed bed6+5 Homer file_size 4,148,932 downloaded_date 08/12/2023 release_date 10/19/2020 date_added_to_filer 12/19/2025 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Homer/bed11/hg38/Elk1_ETS.hg38.processed.bed.gz processed_file_md5 ad6dd20b625aaba4f6a4ffb31aa7aa7e wget_command wget https://filer2.niagads.org/Annotationtracks/Homer/bed11/hg38/Elk1_ETS.hg38.processed.bed.gz -P GADB/Annotationtracks/Homer/bed11/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Homer/bed11/hg38/Elk1_ETS.hg38.processed.bed.gz.tbi -P GADB/Annotationtracks/Homer/bed11/hg38/ link_out_url https://homer.ucsd.edu/homer/ raw_file_url https://homer.ucsd.edu/homer/data/motifs/homer.KnownMotifs.hg38.191020.bed.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/Homer/homer.KnownMotifs.hg38.191020.bed.gz -P GADB/Annotationtracks/Downloads/Homer/ raw_file_md5 7f59c5d4bbf50fea7476a173961ea174 data_category TFBS [Transcription Factor Binding Site] Genomic feature type HOMER transcription factor binding sites track_description version=191020;TF_name=Elk1;DNA_binding_domain=ETS;Cell_type=Hela;Assay=ChIP-Seq;Origin=GSE31477;schema=BED6+5;dataSource_pubmed_id=20513432;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/HOMER.html;original_biosample_term_id=Not applicable;is_hg38_lifted=no system_category Not applicable life_stage Not applicable track_name HOMER Motif finding ELK1 transcription factor binding sites (bed6+5 Homer) [TFBS]
ELK3 • K562 NGENCKJVJHDXM6 • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq K562 TF Show metadata Download track Track metadata identifier NGENCKJVJHDXM6 data_source ENCODE Download track Download number_of_intervals 674 bp_covered 200,890 output_type IDR thresholded peaks genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR972CVS biological_replicate 1 technical_replicate 1_1 antibody ELK3 assay TF ChIP-seq file_format bed narrowPeak file_size 13,999 downloaded_date 06/12/2022 release_date 07/01/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF746SJL.bed.gz processed_file_md5 27ddc7e8777814975aa054128fa8de4e wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF746SJL.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF746SJL.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF746SJL/@@download/ENCFF746SJL.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF746SJL.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 e045863748c1a7040bc1c1cab6a6a391 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens K562 genetically modified (insertion) using CRISPR targeting H. sapiens ELK3;Lab=Michael Snyder, Stanford;ENCODE_internal_tags=RegulomeDB_2_2,RegulomeDB_2_1;Life_stage_age=adult 53 years;Reference=NR;External_resources=GEO:GSE170827;Project=ENCODE;Award=UM1HG009442;Experiment_date_released=2020-08-03,2021-07-14,2020-06-30;Submitted_track_name=rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=hematopoietic cell,leukocyte,cancer cell;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=K562 cell,K-562 cell,K-562;Analysis_title=ENCODE4 v1.4.0 GRCh38;GM=[Method:CRISPR|Category:insertion];schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name ENCODE K562 (repl. 1) TF ChIP-seq ELK3 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR972CVS] [Life stage: Adult] [TF ChIP-seq peaks]
ELK3 • K562 NGENCO6H67QWFC • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq K562 TF Show metadata Download track Track metadata identifier NGENCO6H67QWFC data_source ENCODE Download track Download number_of_intervals 420 bp_covered 135,823 output_type IDR thresholded peaks genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR972CVS biological_replicate 2 technical_replicate 2_1 antibody ELK3 assay TF ChIP-seq file_format bed narrowPeak file_size 8,628 downloaded_date 06/12/2022 release_date 07/01/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF615QTU.bed.gz processed_file_md5 2fcaf9c171c4caed532081e86b82b741 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF615QTU.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF615QTU.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF615QTU/@@download/ENCFF615QTU.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF615QTU.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 1c1c0fe1088d2f4e5015bcd07c8882dd data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens K562 genetically modified (insertion) using CRISPR targeting H. sapiens ELK3;Lab=Michael Snyder, Stanford;ENCODE_internal_tags=RegulomeDB_2_2,RegulomeDB_2_1;Life_stage_age=adult 53 years;Reference=NR;External_resources=GEO:GSE170827;Project=ENCODE;Award=UM1HG009442;Experiment_date_released=2020-08-03,2021-07-14,2020-06-30;Submitted_track_name=rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=hematopoietic cell,leukocyte,cancer cell;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=K562 cell,K-562 cell,K-562;Analysis_title=ENCODE4 v1.4.0 GRCh38;GM=[Method:CRISPR|Category:insertion];schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name ENCODE K562 (repl. 2) TF ChIP-seq ELK3 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR972CVS] [Life stage: Adult] [TF ChIP-seq peaks]