EP300 • A549 NGENCSPLWPVP3X • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq A549 TF Show metadata Download track Track metadata identifier NGENCSPLWPVP3X data_source ENCODE Download track Download number_of_intervals 41,677 bp_covered 20,300,013 output_type IDR thresholded peaks genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR602BTS biological_replicate 1, 2, 3 technical_replicate 1_1, 2_1, 3_1 antibody EP300 assay TF ChIP-seq file_format bed narrowPeak file_size 733,569 downloaded_date 09/10/2024 release_date 01/02/2021 date_added_to_filer 10/01/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF266AVR.bed.gz processed_file_md5 8d70788975a1314e2e01ba3cd6c5510a wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF266AVR.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF266AVR.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF266AVR/@@download/ENCFF266AVR.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF266AVR.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 21284fdf1536ad8c6248ddbce6a5adcd data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens A549 treated with 100 nM dexamethasone (agonist) for 5 minutes;Lab=Tim Reddy, Duke;ENCODE_internal_tags=RegulomeDB_2_2,RegulomeDB_2_1;Life_stage_age=adult 58 years;Reference=NR;External_resources=GEO:GSE174931,FactorBook:ENCSR602BTS;Project=GGR;Award=U01HG007900;Experiment_date_released=2017-10-19;Submitted_track_name=pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=A549;ENCODE_cell_slims=cancer cell;ENCODE_system_slims=respiratory system;ENCODE_biosample_term_synonyms=A-549,A549 cell;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name ENCODE A549 (repl. 1, 2, 3) TF ChIP-seq EP300 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR602BTS] [Life stage: Adult] [TF ChIP-seq peaks]
EP300 • GM12878 NGENCSQKVKLED5 • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq GM12878 TF Show metadata Download track Track metadata identifier NGENCSQKVKLED5 data_source ENCODE Download track Download number_of_intervals 4,700 bp_covered 1,225,249 output_type IDR thresholded peaks genome_build hg38 cell_type GM12878 biosample_type Cell line biosample_term_id EFO:0002784 tissue_category Blood encode_experiment_id ENCSR000BHB biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EP300 assay TF ChIP-seq file_format bed narrowPeak file_size 78,139 downloaded_date 06/12/2022 release_date 12/27/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF347NRI.bed.gz processed_file_md5 c385c81f3edf3dd84c748bd48f72663b wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF347NRI.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF347NRI.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF347NRI/@@download/ENCFF347NRI.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF347NRI.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 6e9882acf815249f74980dbe38dcf76a data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens GM12878;Lab=Richard Myers, HAIB;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=NR;Reference=PMID:31969180;External_resources=FactorBook:ENCSR000BHB,GEO:GSM803387,UCSC-ENCODE-hg19:wgEncodeEH001487;Project=ENCODE;Award=U54HG004576;Experiment_date_released=2011-07-18;Submitted_track_name=pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=GM12878;ENCODE_cell_slims=hematopoietic cell,leukocyte,B cell;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002784;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name ENCODE GM12878 (repl. 1, 2) TF ChIP-seq EP300 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000BHB] [Life stage: Adult] [TF ChIP-seq peaks]
EP300 • Lung NGENCSRSCMFFKX • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq Lung TF Show metadata Download track Track metadata identifier NGENCSRSCMFFKX data_source ENCODE Download track Download number_of_intervals 3,049 bp_covered 1,201,399 output_type IDR thresholded peaks genome_build hg38 cell_type Lung biosample_type Tissue biosample_term_id UBERON:0002048 tissue_category Lung encode_experiment_id ENCSR290QBB biological_replicate 1 technical_replicate 1_1 antibody EP300 assay TF ChIP-seq file_format bed narrowPeak file_size 60,798 downloaded_date 06/12/2022 release_date 08/13/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF306FRW.bed.gz processed_file_md5 52d68a690b2a36993b37dfbcccfedb11 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF306FRW.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF306FRW.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF306FRW/@@download/ENCFF306FRW.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF306FRW.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 4f6e15cc51142adb3f82a97a90c808ee data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens upper lobe of left lung tissue male adult (54 years);Lab=Richard Myers, HAIB;ENCODE_internal_tags=RegulomeDB_2_2,ENTEx,ENCYCLOPEDIAv2,RegulomeDB_2_1;Life_stage_age=adult 54 years;Reference=NR;External_resources=GEO:GSE105433,FactorBook:ENCSR290QBB;Project=ENCODE;Award=U54HG006998;Experiment_date_released=2017-06-15,2017-02-02;Submitted_track_name=rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=upper lobe of left lung;ENCODE_cell_slims=NR;ENCODE_system_slims=respiratory system;ENCODE_biosample_term_synonyms=left upper lobe,left lung cranial lobe,lobus superior pulmonis sinistri,lobus superior (pulmo sinister),left upper lobe of lung,superior lobe of left lung;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=UBERON:0008952;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name ENCODE Lung (repl. 1) TF ChIP-seq EP300 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR290QBB] [Life stage: Adult] [TF ChIP-seq peaks]
EP300 • A549 NGENCSWIF2PGC6 • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq A549 TF Show metadata Download track Track metadata identifier NGENCSWIF2PGC6 data_source ENCODE Download track Download number_of_intervals 26,736 bp_covered 12,095,370 output_type IDR thresholded peaks genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR788VKG biological_replicate 1, 2, 3 technical_replicate 1_1, 2_1, 3_1 antibody EP300 assay TF ChIP-seq file_format bed narrowPeak file_size 504,753 downloaded_date 09/10/2024 release_date 01/02/2021 date_added_to_filer 10/01/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF312HBM.bed.gz processed_file_md5 5a3a480f4d50a873c76ede3666cd0ddf wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF312HBM.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF312HBM.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF312HBM/@@download/ENCFF312HBM.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF312HBM.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 e0b3160134bcbf5b17ba1d42c19c2ab8 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens A549 treated with 100 nM dexamethasone (agonist) for 15 minutes;Lab=Tim Reddy, Duke;ENCODE_internal_tags=RegulomeDB_2_2,RegulomeDB_2_1;Life_stage_age=adult 58 years;Reference=NR;External_resources=GEO:GSE175158,FactorBook:ENCSR788VKG;Project=GGR;Award=U01HG007900;Experiment_date_released=2017-10-19;Submitted_track_name=pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=A549;ENCODE_cell_slims=cancer cell;ENCODE_system_slims=respiratory system;ENCODE_biosample_term_synonyms=A-549,A549 cell;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name ENCODE A549 (repl. 1, 2, 3) TF ChIP-seq EP300 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR788VKG] [Life stage: Adult] [TF ChIP-seq peaks]
EP300 • A549 NGENCT5FVHPTQF • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq A549 TF Show metadata Download track Track metadata identifier NGENCT5FVHPTQF data_source ENCODE Download track Download number_of_intervals 4,280 bp_covered 1,860,158 output_type IDR thresholded peaks genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR047EVQ biological_replicate 1 technical_replicate 1_1 antibody EP300 assay TF ChIP-seq file_format bed narrowPeak file_size 72,177 downloaded_date 07/10/2025 release_date 01/01/2021 date_added_to_filer 07/30/2025 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF337BGP.bed.gz processed_file_md5 8d1c4b0a66c38856c425ec16f130c7e9 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF337BGP.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF337BGP.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF337BGP/@@download/ENCFF337BGP.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF337BGP.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 f6211a472ed4c1e88561347a36525f34 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens A549 treated with 100 nM dexamethasone (agonist) for 3 hours;Lab=Tim Reddy, Duke;ENCODE_internal_tags=RegulomeDB_2_2,RegulomeDB_2_1;Life_stage_age=adult 58 years;Reference=NR;External_resources=FactorBook:ENCSR047EVQ,GEO:GSE91196;Project=GGR;Award=U01HG007900;Experiment_date_released=2016-10-27;Submitted_track_name=rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=A549;ENCODE_cell_slims=cancer cell;ENCODE_system_slims=respiratory system;ENCODE_biosample_term_synonyms=A-549,A549 cell;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name ENCODE A549 (repl. 1) TF ChIP-seq EP300 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR047EVQ] [Life stage: Adult] [TF ChIP-seq peaks]
EP300 • A549 NGENCTEAFYKBO5 • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq A549 TF Show metadata Download track Track metadata identifier NGENCTEAFYKBO5 data_source ENCODE Download track Download number_of_intervals 11,711 bp_covered 5,208,849 output_type IDR thresholded peaks genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR610RKF biological_replicate 1, 3 technical_replicate 1_1, 3_1 antibody EP300 assay TF ChIP-seq file_format bed narrowPeak file_size 206,685 downloaded_date 09/10/2024 release_date 01/02/2021 date_added_to_filer 10/01/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF268DAS.bed.gz processed_file_md5 cb14ee853a727e382904c224a240b098 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF268DAS.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF268DAS.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF268DAS/@@download/ENCFF268DAS.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF268DAS.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 1253d424b3605305b9af05bfa2fc3021 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens A549 treated with 100 nM dexamethasone (agonist) for 5 hours;Lab=Tim Reddy, Duke;ENCODE_internal_tags=RegulomeDB_2_2,RegulomeDB_2_1;Life_stage_age=adult 58 years;Reference=NR;External_resources=GEO:GSE91299,FactorBook:ENCSR610RKF;Project=GGR;Award=U01HG007900;Experiment_date_released=2016-10-27;Submitted_track_name=rep1_vs_rep3.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=A549;ENCODE_cell_slims=cancer cell;ENCODE_system_slims=respiratory system;ENCODE_biosample_term_synonyms=A-549,A549 cell;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;Bio_rep=1, 2, 3;Tech_rep=1_1, 2_1, 3_1;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name ENCODE A549 (repl. 1, 3) TF ChIP-seq EP300 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR610RKF] [Life stage: Adult] [TF ChIP-seq peaks]
EP300 • A549 NGENCTG4P4Y2NK • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq A549 TF Show metadata Download track Track metadata identifier NGENCTG4P4Y2NK data_source ENCODE Download track Download number_of_intervals 7,757 bp_covered 3,489,794 output_type conservative IDR thresholded peaks genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR770OTI biological_replicate 1, 2, 3 technical_replicate 1_1, 2_1, 3_1 antibody EP300 assay TF ChIP-seq file_format bed narrowPeak file_size 149,282 downloaded_date 07/10/2025 release_date 01/03/2021 date_added_to_filer 07/30/2025 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF501HGR.bed.gz processed_file_md5 4ced1a3f0f37f3f539af898b9987faf3 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF501HGR.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF501HGR.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF501HGR/@@download/ENCFF501HGR.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF501HGR.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 712727c7fd0f597ca23658252bdc175b data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq conservative IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens A549 treated with 100 nM dexamethasone (agonist) for 2 hours;Lab=Tim Reddy, Duke;ENCODE_internal_tags=RegulomeDB_2_2,RegulomeDB_2_1;Life_stage_age=adult 58 years;Reference=NR;External_resources=GEO:GSE91332,FactorBook:ENCSR770OTI;Project=GGR;Award=U01HG007900;Experiment_date_released=2016-10-27;Submitted_track_name=rep2_vs_rep3.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=A549;ENCODE_cell_slims=cancer cell;ENCODE_system_slims=respiratory system;ENCODE_biosample_term_synonyms=A549 cell,A-549;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name ENCODE A549 (repl. 1, 2, 3) TF ChIP-seq EP300 conservative IDR thresholded peaks (narrowPeak) [Experiment: ENCSR770OTI] [Life stage: Adult] [TF ChIP-seq peaks]
EP300 • A549 NGENCTI4VGFHXD • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq A549 TF Show metadata Download track Track metadata identifier NGENCTI4VGFHXD data_source ENCODE Download track Download number_of_intervals 31,967 bp_covered 14,193,133 output_type IDR thresholded peaks genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR174FJD biological_replicate 2 technical_replicate 2_1 antibody EP300 assay TF ChIP-seq file_format bed narrowPeak file_size 545,742 downloaded_date 07/10/2025 release_date 01/01/2021 date_added_to_filer 07/30/2025 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF150XZG.bed.gz processed_file_md5 b6459b3987ab8b767377f97d5364da38 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF150XZG.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF150XZG.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF150XZG/@@download/ENCFF150XZG.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF150XZG.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 6e26d94602a0aa7061fa4af632ba9109 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens A549 treated with 100 nM dexamethasone (agonist) for 10 minutes;Lab=Tim Reddy, Duke;ENCODE_internal_tags=RegulomeDB_2_2,RegulomeDB_2_1;Life_stage_age=adult 58 years;Reference=NR;External_resources=FactorBook:ENCSR174FJD,GEO:GSE175053;Project=GGR;Award=U01HG007900;Experiment_date_released=2017-10-19;Submitted_track_name=rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=A549;ENCODE_cell_slims=cancer cell;ENCODE_system_slims=respiratory system;ENCODE_biosample_term_synonyms=A-549,A549 cell;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name ENCODE A549 (repl. 2) TF ChIP-seq EP300 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR174FJD] [Life stage: Adult] [TF ChIP-seq peaks]
EP300 • HepG2 NGENCTRIRSLA6N • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq HepG2 TF Show metadata Download track Track metadata identifier NGENCTRIRSLA6N data_source ENCODE Download track Download number_of_intervals 25,080 bp_covered 7,683,226 output_type IDR thresholded peaks genome_build hg38 cell_type HepG2 biosample_type Cell line biosample_term_id EFO:0001187 tissue_category Liver encode_experiment_id ENCSR000BLW biological_replicate 2 technical_replicate 2_1 antibody EP300 assay TF ChIP-seq file_format bed narrowPeak file_size 473,764 downloaded_date 06/12/2022 release_date 12/27/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF187GBB.bed.gz processed_file_md5 b92f049e828fa506867d02372d884464 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF187GBB.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF187GBB.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF187GBB/@@download/ENCFF187GBB.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF187GBB.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 6b19bf825af5a2dd3bce1f22fda82d01 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens HepG2;Lab=Richard Myers, HAIB;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=child 15 years;Reference=PMID:32728244;External_resources=FactorBook:ENCSR000BLW,UCSC-ENCODE-hg19:wgEncodeEH001612,GEO:GSM803499;Project=ENCODE;Award=U54HG004576;Experiment_date_released=2011-07-18;Submitted_track_name=rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=HepG2;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_system_slims=exocrine system,endocrine system,digestive system;ENCODE_biosample_term_synonyms=Hep-G2,HepG2 cell;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001187;is_hg38_lifted=no system_category Digestive life_stage Child track_name ENCODE HepG2 (repl. 2) TF ChIP-seq EP300 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000BLW] [Life stage: Child] [TF ChIP-seq peaks]
EP300 • A549 NGENCTSVXDCFLL • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq A549 TF Show metadata Download track Track metadata identifier NGENCTSVXDCFLL data_source ENCODE Download track Download number_of_intervals 16,643 bp_covered 7,377,176 output_type IDR thresholded peaks genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR841ASB biological_replicate 1, 2, 3 technical_replicate 1_1, 2_1, 3_1 antibody EP300 assay TF ChIP-seq file_format bed narrowPeak file_size 304,028 downloaded_date 09/10/2024 release_date 01/03/2021 date_added_to_filer 10/01/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF748EFU.bed.gz processed_file_md5 a6ffbeba3d47ed774663f55778c9e65f wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF748EFU.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF748EFU.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF748EFU/@@download/ENCFF748EFU.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF748EFU.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 cfb1e344eb8d0ad0be904de50ba9ea7b data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens A549 treated with 100 nM dexamethasone (agonist) for 6 hours;Lab=Tim Reddy, Duke;ENCODE_internal_tags=RegulomeDB_2_2,RegulomeDB_2_1;Life_stage_age=adult 58 years;Reference=NR;External_resources=FactorBook:ENCSR841ASB,GEO:GSE91344;Project=GGR;Award=U01HG007900;Experiment_date_released=2016-10-27;Submitted_track_name=pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=A549;ENCODE_cell_slims=cancer cell;ENCODE_system_slims=respiratory system;ENCODE_biosample_term_synonyms=A-549,A549 cell;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name ENCODE A549 (repl. 1, 2, 3) TF ChIP-seq EP300 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR841ASB] [Life stage: Adult] [TF ChIP-seq peaks]
EP300 • A549 NGENCU2ENWU5RU • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq A549 TF Show metadata Download track Track metadata identifier NGENCU2ENWU5RU data_source ENCODE Download track Download number_of_intervals 9,021 bp_covered 4,185,783 output_type IDR thresholded peaks genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR260WCE biological_replicate 1, 2, 3 technical_replicate 1_1, 2_1, 3_1 antibody EP300 assay TF ChIP-seq file_format bed narrowPeak file_size 164,422 downloaded_date 09/10/2024 release_date 12/31/2020 date_added_to_filer 10/01/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF810LCE.bed.gz processed_file_md5 e7623eb296b9354fb8ae491505d053a5 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF810LCE.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF810LCE.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF810LCE/@@download/ENCFF810LCE.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF810LCE.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 a2798ce5daa4320e04ebda7eac144b27 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens A549 treated with 100 nM dexamethasone (agonist) for 0.5 hours;Lab=Tim Reddy, Duke;ENCODE_internal_tags=RegulomeDB_2_2,RegulomeDB_2_1;Life_stage_age=adult 58 years;Reference=NR;External_resources=FactorBook:ENCSR260WCE,GEO:GSE91230;Project=GGR;Award=U01HG007900;Experiment_date_released=2016-10-27;Submitted_track_name=pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=A549;ENCODE_cell_slims=cancer cell;ENCODE_system_slims=respiratory system;ENCODE_biosample_term_synonyms=A-549,A549 cell;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name ENCODE A549 (repl. 1, 2, 3) TF ChIP-seq EP300 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR260WCE] [Life stage: Adult] [TF ChIP-seq peaks]
EP300 • Ovary NGENCUHYAGWKC6 • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq Ovary TF Show metadata Download track Track metadata identifier NGENCUHYAGWKC6 data_source ENCODE Download track Download number_of_intervals 4,864 bp_covered 1,191,024 output_type IDR thresholded peaks genome_build hg38 cell_type Ovary biosample_type Tissue biosample_term_id NCIT:C12404 tissue_category Female Reproductive encode_experiment_id ENCSR696LQU biological_replicate 1 technical_replicate 1_1 antibody EP300 assay TF ChIP-seq file_format bed narrowPeak file_size 94,925 downloaded_date 06/12/2022 release_date 12/02/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF767VVG.bed.gz processed_file_md5 33f285a7ed71b0540e0a2ba1c4888bcc wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF767VVG.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF767VVG.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF767VVG/@@download/ENCFF767VVG.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF767VVG.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 7d5c08d8118cee90eb1b1b05315b4778 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens ovary tissue female adult (53 years);Lab=Richard Myers, HAIB;ENCODE_internal_tags=RegulomeDB_2_2,ENTEx,ENCYCLOPEDIAv2,RegulomeDB_2_1;Life_stage_age=adult 53 years;Reference=NR;External_resources=FactorBook:ENCSR696LQU,GEO:GSE105704;Project=ENCODE;Award=U54HG006998;Experiment_date_released=2017-06-15,2017-02-02;Submitted_track_name=rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=ovary;ENCODE_cell_slims=NR;ENCODE_system_slims=reproductive system;ENCODE_biosample_term_synonyms=gonad of female reproductive system,gonada of genitalia of female organism,female reproductive system gonada,gonada of female reproductive system,female organism genitalia gonad,gonad of genitalia of female organism,reproductive system of female organism gonada,gonad of female organism genitalia,gonad of reproductive system of female organism,female gonad,gonada of female organism reproductive system,female organism reproductive system gonada,gonada of female organism genitalia,female organism genitalia gonada,genitalia of female organism gonad,ovum-producing ovary,animal ovary,gonad of female organism reproductive system,reproductive system of female organism gonad,genitalia of female organism gonada,female organism reproductive system gonad,gonada of reproductive system of female organism,female reproductive system gonad;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=UBERON:0000992;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name ENCODE Ovary (repl. 1) TF ChIP-seq EP300 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR696LQU] [Life stage: Adult] [TF ChIP-seq peaks]
EP300 • A549 NGENCUIHMRKKJO • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq A549 TF Show metadata Download track Track metadata identifier NGENCUIHMRKKJO data_source ENCODE Download track Download number_of_intervals 6,175 bp_covered 2,590,602 output_type IDR thresholded peaks genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR770OTI biological_replicate 2 technical_replicate 2_1 antibody EP300 assay TF ChIP-seq file_format bed narrowPeak file_size 113,604 downloaded_date 07/10/2025 release_date 01/03/2021 date_added_to_filer 07/30/2025 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF629ORW.bed.gz processed_file_md5 2cbacba92616c0a85201391e1ff72f40 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF629ORW.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF629ORW.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF629ORW/@@download/ENCFF629ORW.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF629ORW.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 8431b1f277b40ee9984bbab8eccd1f27 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens A549 treated with 100 nM dexamethasone (agonist) for 2 hours;Lab=Tim Reddy, Duke;ENCODE_internal_tags=RegulomeDB_2_2,RegulomeDB_2_1;Life_stage_age=adult 58 years;Reference=NR;External_resources=GEO:GSE91332,FactorBook:ENCSR770OTI;Project=GGR;Award=U01HG007900;Experiment_date_released=2016-10-27;Submitted_track_name=rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=A549;ENCODE_cell_slims=cancer cell;ENCODE_system_slims=respiratory system;ENCODE_biosample_term_synonyms=A549 cell,A-549;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name ENCODE A549 (repl. 2) TF ChIP-seq EP300 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR770OTI] [Life stage: Adult] [TF ChIP-seq peaks]
EP300 • GM12878 NGENCUJTMGT2CP • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq GM12878 TF Show metadata Download track Track metadata identifier NGENCUJTMGT2CP data_source ENCODE Download track Download number_of_intervals 327 bp_covered 48,823 output_type IDR thresholded peaks genome_build hg38 cell_type GM12878 biosample_type Cell line biosample_term_id EFO:0002784 tissue_category Blood encode_experiment_id ENCSR000BHB biological_replicate 2 technical_replicate 2_1 antibody EP300 assay TF ChIP-seq file_format bed narrowPeak file_size 5,752 downloaded_date 06/12/2022 release_date 12/27/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF474AMM.bed.gz processed_file_md5 cc79238d4623a617750b31e7babe9283 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF474AMM.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF474AMM.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF474AMM/@@download/ENCFF474AMM.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF474AMM.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 d3e4a5a3f38352cee9e83bb5f67d07d5 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens GM12878;Lab=Richard Myers, HAIB;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=NR;Reference=PMID:31969180;External_resources=FactorBook:ENCSR000BHB,GEO:GSM803387,UCSC-ENCODE-hg19:wgEncodeEH001487;Project=ENCODE;Award=U54HG004576;Experiment_date_released=2011-07-18;Submitted_track_name=rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=GM12878;ENCODE_cell_slims=hematopoietic cell,leukocyte,B cell;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002784;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name ENCODE GM12878 (repl. 2) TF ChIP-seq EP300 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000BHB] [Life stage: Adult] [TF ChIP-seq peaks]
EP300 • GM12878 NGENCV6V44XRP7 • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq GM12878 TF Show metadata Download track Track metadata identifier NGENCV6V44XRP7 data_source ENCODE Download track Download number_of_intervals 21,068 bp_covered 7,101,883 output_type IDR thresholded peaks genome_build hg38 cell_type GM12878 biosample_type Cell line biosample_term_id EFO:0002784 tissue_category Blood encode_experiment_id ENCSR000DZG biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EP300 assay TF ChIP-seq file_format bed narrowPeak file_size 381,011 downloaded_date 06/12/2022 release_date 01/08/2021 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF039QRE.bed.gz processed_file_md5 8bcdaea0b243fc97fd40223c7e73033a wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF039QRE.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF039QRE.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF039QRE/@@download/ENCFF039QRE.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF039QRE.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 921f4c64ff1dd0f267366a64aefc83d2 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens GM12878;Lab=Michael Snyder, Stanford;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=NR;Reference=PMID:31969180;External_resources=UCSC-ENCODE-hg19:wgEncodeEH002037,FactorBook:ENCSR000DZG,GEO:GSM935562;Project=ENCODE;Award=U54HG004558;Experiment_date_released=2011-10-29;Submitted_track_name=pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=GM12878;ENCODE_cell_slims=hematopoietic cell,leukocyte,B cell;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002784;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name ENCODE GM12878 (repl. 1, 2) TF ChIP-seq EP300 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000DZG] [Life stage: Adult] [TF ChIP-seq peaks]
EP300 • A549 NGENCVANTYHGTV • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq A549 TF Show metadata Download track Track metadata identifier NGENCVANTYHGTV data_source ENCODE Download track Download number_of_intervals 7,610 bp_covered 3,371,065 output_type IDR thresholded peaks genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR467VXG biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EP300 assay TF ChIP-seq file_format bed narrowPeak file_size 138,036 downloaded_date 09/10/2024 release_date 12/31/2020 date_added_to_filer 10/01/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF577ZRN.bed.gz processed_file_md5 af94ec708bc414c8e6cb1e833cdc1382 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF577ZRN.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF577ZRN.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF577ZRN/@@download/ENCFF577ZRN.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF577ZRN.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 16ecdb886e6557c5e37e03da71225e24 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens A549 treated with 100 nM dexamethasone (agonist) for 7 hours;Lab=Tim Reddy, Duke;ENCODE_internal_tags=RegulomeDB_2_2,RegulomeDB_2_1;Life_stage_age=adult 58 years;Reference=NR;External_resources=GEO:GSE91269,FactorBook:ENCSR467VXG;Project=GGR;Award=U01HG007900;Experiment_date_released=2016-10-27;Submitted_track_name=rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=A549;ENCODE_cell_slims=cancer cell;ENCODE_system_slims=respiratory system;ENCODE_biosample_term_synonyms=A-549,A549 cell;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;Bio_rep=1, 2, 3;Tech_rep=1_1, 2_1, 3_1;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name ENCODE A549 (repl. 1, 2) TF ChIP-seq EP300 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR467VXG] [Life stage: Adult] [TF ChIP-seq peaks]
EP300 • HepG2 NGENCVBO2A433S • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq HepG2 TF Show metadata Download track Track metadata identifier NGENCVBO2A433S data_source ENCODE Download track Download number_of_intervals 22,075 bp_covered 6,242,047 output_type IDR thresholded peaks genome_build hg38 cell_type HepG2 biosample_type Cell line biosample_term_id EFO:0001187 tissue_category Liver encode_experiment_id ENCSR000BLW biological_replicate 1 technical_replicate 1_1 antibody EP300 assay TF ChIP-seq file_format bed narrowPeak file_size 360,268 downloaded_date 06/12/2022 release_date 12/27/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF207ICH.bed.gz processed_file_md5 0024a602a8aa702a3d382da274564149 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF207ICH.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF207ICH.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF207ICH/@@download/ENCFF207ICH.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF207ICH.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 cd6c702c3b6a6b7ac5a8651ea5ba813b data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens HepG2;Lab=Richard Myers, HAIB;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=child 15 years;Reference=PMID:32728244;External_resources=FactorBook:ENCSR000BLW,UCSC-ENCODE-hg19:wgEncodeEH001612,GEO:GSM803499;Project=ENCODE;Award=U54HG004576;Experiment_date_released=2011-07-18;Submitted_track_name=rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=HepG2;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_system_slims=exocrine system,endocrine system,digestive system;ENCODE_biosample_term_synonyms=Hep-G2,HepG2 cell;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001187;is_hg38_lifted=no system_category Digestive life_stage Child track_name ENCODE HepG2 (repl. 1) TF ChIP-seq EP300 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000BLW] [Life stage: Child] [TF ChIP-seq peaks]
EP300 • A549 NGENCVDTTLFNJT • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq A549 TF Show metadata Download track Track metadata identifier NGENCVDTTLFNJT data_source ENCODE Download track Download number_of_intervals 5,945 bp_covered 2,409,354 output_type conservative IDR thresholded peaks genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR145YCX biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EP300 assay TF ChIP-seq file_format bed narrowPeak file_size 106,129 downloaded_date 07/10/2025 release_date 01/01/2021 date_added_to_filer 07/30/2025 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF061DZZ.bed.gz processed_file_md5 0428f93907f4a2fd6642194ec93389bc wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF061DZZ.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF061DZZ.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF061DZZ/@@download/ENCFF061DZZ.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF061DZZ.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 e352f857ab13f08b93f781336e85a04d data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq conservative IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens A549 treated with 100 nM dexamethasone (agonist) for 4 hours;Lab=Tim Reddy, Duke;ENCODE_internal_tags=RegulomeDB_2_2,RegulomeDB_2_1;Life_stage_age=adult 58 years;Reference=NR;External_resources=FactorBook:ENCSR145YCX,GEO:GSE91210;Project=GGR;Award=U01HG007900;Experiment_date_released=2016-10-27;Submitted_track_name=rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=A549;ENCODE_cell_slims=cancer cell;ENCODE_system_slims=respiratory system;ENCODE_biosample_term_synonyms=A-549,A549 cell;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name ENCODE A549 (repl. 1, 2) TF ChIP-seq EP300 conservative IDR thresholded peaks (narrowPeak) [Experiment: ENCSR145YCX] [Life stage: Adult] [TF ChIP-seq peaks]
EP300 • HeLa-S3 NGENCVE3JNHFC6 • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq HeLa-S3 TF Show metadata Download track Track metadata identifier NGENCVE3JNHFC6 data_source ENCODE Download track Download number_of_intervals 23,210 bp_covered 7,726,961 output_type IDR thresholded peaks genome_build hg38 cell_type HeLa-S3 biosample_type Cell line biosample_term_id EFO:0002791 tissue_category Female Reproductive encode_experiment_id ENCSR680OFU biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EP300 assay TF ChIP-seq file_format bed narrowPeak file_size 407,343 downloaded_date 06/12/2022 release_date 12/03/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF245KNK.bed.gz processed_file_md5 d8b17f6ec47344d15ff5ee0f777f9ac5 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF245KNK.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF245KNK.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF245KNK/@@download/ENCFF245KNK.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF245KNK.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 e9a2d3f0c75829bec3c69bd0d54d5f2d data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens HeLa-S3;Lab=Michael Snyder, Stanford;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,ENCYCLOPEDIAv2,RegulomeDB_2_1,RegulomeDB_2_2;Life_stage_age=adult 31 years;Reference=PMCID:PMC7343189;External_resources=GEO:GSE127427,FactorBook:ENCSR680OFU;Project=ENCODE;Award=U54HG006996;Experiment_date_released=2014-07-07;Submitted_track_name=pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=HeLa-S3;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_system_slims=reproductive system;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002791;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name ENCODE HeLa-S3 (repl. 1, 2) TF ChIP-seq EP300 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR680OFU] [Life stage: Adult] [TF ChIP-seq peaks]
EP300 • Ishikawa NGENCVFK23SY73 • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq Ishikawa TF Show metadata Download track Track metadata identifier NGENCVFK23SY73 data_source ENCODE Download track Download number_of_intervals 8,027 bp_covered 2,794,040 output_type IDR thresholded peaks genome_build hg38 cell_type Ishikawa biosample_type Cell line biosample_term_id EFO:0005718 tissue_category Female Reproductive encode_experiment_id ENCSR000BUE biological_replicate 2 technical_replicate 2_1 antibody EP300 assay TF ChIP-seq file_format bed narrowPeak file_size 150,247 downloaded_date 06/12/2022 release_date 12/26/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF964CBD.bed.gz processed_file_md5 3b168d30a6a3be94c6be58d8219d6801 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF964CBD.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF964CBD.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF964CBD/@@download/ENCFF964CBD.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF964CBD.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 d8df56a6f65f45cba6eee3742fef72d5 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens Ishikawa;Lab=Richard Myers, HAIB;ENCODE_internal_tags=ENCYCLOPEDIAv1,RegulomeDB_2_2,ENCYCLOPEDIAv2,RegulomeDB_2_1;Life_stage_age=adult 39 years;Reference=PMID:22710073;External_resources=GEO:GSM1010759,UCSC-ENCODE-hg19:wgEncodeEH003274,FactorBook:ENCSR000BUE;Project=ENCODE;Award=U54HG004576;Experiment_date_released=2012-09-10;Submitted_track_name=rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=Ishikawa;ENCODE_cell_slims=cancer cell;ENCODE_system_slims=reproductive system;ENCODE_biosample_term_synonyms=Ishikawa cell;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0005718;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name ENCODE Ishikawa (repl. 2) TF ChIP-seq EP300 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000BUE] [Life stage: Adult] [TF ChIP-seq peaks]