EP300 • Ishikawa NGFTBH656FI7T3 • Factorbook34755879 Motif finding Ishikawa TFBS Show metadata Download track Track metadata identifier NGFTBH656FI7T3 data_source Factorbook Download track Download number_of_intervals 5,519 bp_covered 44,152 output_type transcription factor binding sites all genome_build hg38 cell_type Ishikawa biosample_type Cell line biosample_term_id EFO:0005718 tissue_category Female Reproductive encode_experiment_id ENCSR000BUE biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EP300 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 55,257 downloaded_date 07/10/2024 release_date 09/10/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF191GQE_RCATTCCW_sorted.bed.gz processed_file_md5 0ff37ecada97e7d966c447273637222d wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF191GQE_RCATTCCW_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF191GQE_RCATTCCW_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF191GQE_RCATTCCW.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF191GQE_RCATTCCW.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 daa3670eb930bf9bb91f52840b660733 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens Ishikawa;Original_cell_type=Ishikawa;Lab=Richard Myers, HAIB;System=reproductive system;ENCODE_BED_id=ENCFF191GQE;ENCODE_bigBed_id=ENCFF364ZWT;PMID=34755879;Motif_sequence=RCATTCCW;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0005718;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook Ishikawa (repl. 1, 2) Motif finding EP300 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BUE] [Life stage: Adult] [TFBS]
EP300 • Stomach NGFTBH7GOXK4KT • Factorbook34755879 Motif finding Stomach TFBS Show metadata Download track Track metadata identifier NGFTBH7GOXK4KT data_source Factorbook Download track Download number_of_intervals 1,250 bp_covered 13,750 output_type transcription factor binding sites all genome_build hg38 cell_type Stomach biosample_type Tissue biosample_term_id UBERON:0000945 tissue_category Digestive encode_experiment_id ENCSR684NJD biological_replicate 1 technical_replicate 1_1 antibody EP300 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 18,102 downloaded_date 07/10/2024 release_date 06/15/2017 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF099PQM_BTTCCCRGAAV_sorted.bed.gz processed_file_md5 55f7f338ef51012bcd37f2674da5ae11 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF099PQM_BTTCCCRGAAV_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF099PQM_BTTCCCRGAAV_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF099PQM_BTTCCCRGAAV.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF099PQM_BTTCCCRGAAV.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 81a0c6b71ce1df13932a1637e1dad1cc data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens stomach tissue male adult (54 years);Original_cell_type=stomach;Lab=Richard Myers, HAIB;System=digestive system;ENCODE_BED_id=ENCFF099PQM;ENCODE_bigBed_id=ENCFF818VAB;PMID=34755879;Motif_sequence=BTTCCCRGAAV;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=UBERON:0000945;is_hg38_lifted=no system_category Digestive life_stage Adult track_name Factorbook Stomach (repl. 1) Motif finding EP300 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR684NJD] [Life stage: Adult] [TFBS]
EP300 • Gastroesophageal sphincter NGFTBHC3DJO2V6 • Factorbook34755879 Motif finding Gastroesophageal sphincter TFBS Show metadata Download track Track metadata identifier NGFTBHC3DJO2V6 data_source Factorbook Download track Download number_of_intervals 2,781 bp_covered 22,248 output_type transcription factor binding sites all genome_build hg38 cell_type Gastroesophageal sphincter biosample_type Tissue biosample_term_id UBERON:0004550 tissue_category Digestive encode_experiment_id ENCSR551MLB biological_replicate 1 technical_replicate 1_1 antibody EP300 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 29,949 downloaded_date 07/10/2024 release_date 06/15/2017 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF645JET_TGACKCAB_sorted.bed.gz processed_file_md5 5c7eed6a4350c7578cfc60392622e77c wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF645JET_TGACKCAB_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF645JET_TGACKCAB_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF645JET_TGACKCAB.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF645JET_TGACKCAB.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 865633d17a0d142096a69d9cccc5bab1 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens gastroesophageal sphincter tissue male adult (37 years);Original_cell_type=gastroesophageal sphincter;Lab=Richard Myers, HAIB;System=digestive system,musculature;ENCODE_BED_id=ENCFF645JET;ENCODE_bigBed_id=ENCFF211FPL;PMID=34755879;Motif_sequence=TGACKCAB;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=UBERON:0004550;is_hg38_lifted=no system_category Digestive life_stage Adult track_name Factorbook Gastroesophageal sphincter (repl. 1) Motif finding EP300 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR551MLB] [Life stage: Adult] [TFBS]
EP300 • Neural cell NGFTBHDXWCF32E • Factorbook34755879 Motif finding Neural cell TFBS Show metadata Download track Track metadata identifier NGFTBHDXWCF32E data_source Factorbook Download track Download number_of_intervals 19,037 bp_covered 190,370 output_type transcription factor binding sites all genome_build hg38 cell_type Neural cell biosample_type In vitro differentiated cells biosample_term_id CL:0002319 tissue_category Brain encode_experiment_id ENCSR843ZUP biological_replicate 1, 2 technical_replicate 1_1, 1_2, 2_1 antibody EP300 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 227,262 downloaded_date 07/10/2024 release_date 07/07/2014 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF364NDJ_BTGACAGSTD_sorted.bed.gz processed_file_md5 b8c581624345ac7279270b34c978a660 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF364NDJ_BTGACAGSTD_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF364NDJ_BTGACAGSTD_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF364NDJ_BTGACAGSTD.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF364NDJ_BTGACAGSTD.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 32022630f07d51a5bd70c49f7b5e9098 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens neural cell originated from H1;Original_cell_type=neural cell;Lab=Michael Snyder, Stanford;System=peripheral nervous system,central nervous system;ENCODE_BED_id=ENCFF364NDJ;ENCODE_bigBed_id=ENCFF830ROR;PMID=34755879;Motif_sequence=BTGACAGSTD;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=CL:0002319;is_hg38_lifted=no system_category Nervous life_stage Unknown track_name Factorbook Neural cell (repl. 1, 2) Motif finding EP300 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR843ZUP] [TFBS]
EP300 • A549 NGFTBHHSDBJPD5 • Factorbook34755879 Motif finding A549 TFBS Show metadata Download track Track metadata identifier NGFTBHHSDBJPD5 data_source Factorbook Download track Download number_of_intervals 3,349 bp_covered 50,235 output_type transcription factor binding sites all genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR124VXG biological_replicate 1, 2, 3 technical_replicate 1_1, 2_1, 3_1 antibody EP300 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 53,254 downloaded_date 07/10/2024 release_date 10/27/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF758FGU_RGMACAGAVTGTWCH_sorted.bed.gz processed_file_md5 40f80446892fa470146f95c105da1cac wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF758FGU_RGMACAGAVTGTWCH_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF758FGU_RGMACAGAVTGTWCH_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF758FGU_RGMACAGAVTGTWCH.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF758FGU_RGMACAGAVTGTWCH.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 aca7fd2ee9ecc0a64f951ae0638c116d data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens A549 treated with 100 nM dexamethasone (agonist) for 12 hours;Original_cell_type=A549;Lab=Tim Reddy, Duke;System=respiratory system;ENCODE_BED_id=ENCFF758FGU;ENCODE_bigBed_id=ENCFF415SPE;PMID=34755879;Motif_sequence=RGMACAGAVTGTWCH;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name Factorbook A549 (repl. 1, 2, 3) Motif finding EP300 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR124VXG] [Life stage: Adult] [TFBS]
EP300 • A549 NGFTBHNHRBHLYU • Factorbook34755879 Motif finding A549 TFBS Show metadata Download track Track metadata identifier NGFTBHNHRBHLYU data_source Factorbook Download track Download number_of_intervals 11,051 bp_covered 165,765 output_type transcription factor binding sites all genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR602BTS biological_replicate 1, 2, 3 technical_replicate 1_1, 2_1, 3_1 antibody EP300 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 161,561 downloaded_date 07/10/2024 release_date 10/19/2017 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF250DXN_WGNACABYCTGTBCY_sorted.bed.gz processed_file_md5 bede48c96275f44e8c7047a44b6eee0f wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF250DXN_WGNACABYCTGTBCY_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF250DXN_WGNACABYCTGTBCY_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF250DXN_WGNACABYCTGTBCY.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF250DXN_WGNACABYCTGTBCY.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 c8692810deebce14cef0e89c3e4af8c9 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens A549 treated with 100 nM dexamethasone (agonist) for 5 minutes;Original_cell_type=A549;Lab=Tim Reddy, Duke;System=respiratory system;ENCODE_BED_id=ENCFF250DXN;ENCODE_bigBed_id=ENCFF266AVR;PMID=34755879;Motif_sequence=WGNACABYCTGTBCY;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name Factorbook A549 (repl. 1, 2, 3) Motif finding EP300 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR602BTS] [Life stage: Adult] [TFBS]
EP300 • HeLa-S3 NGFTBHSXXSRYQM • Factorbook34755879 Motif finding HeLa-S3 TFBS Show metadata Download track Track metadata identifier NGFTBHSXXSRYQM data_source Factorbook Download track Download number_of_intervals 13,931 bp_covered 111,448 output_type transcription factor binding sites all genome_build hg38 cell_type HeLa-S3 biosample_type Cell line biosample_term_id EFO:0002791 tissue_category Female Reproductive encode_experiment_id ENCSR000ECV biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EP300 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 136,150 downloaded_date 07/10/2024 release_date 10/29/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF631WOD_TGAGTCAY_sorted.bed.gz processed_file_md5 94dbd06f56dbd81c961ba59f07507130 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF631WOD_TGAGTCAY_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF631WOD_TGAGTCAY_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF631WOD_TGAGTCAY.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF631WOD_TGAGTCAY.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 253af5060b5a878285e5f656003a99b5 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens HeLa-S3;Original_cell_type=HeLa-S3;Lab=Michael Snyder, Stanford;System=reproductive system;ENCODE_BED_id=ENCFF631WOD;ENCODE_bigBed_id=ENCFF089VPQ;PMID=34755879;Motif_sequence=TGAGTCAY;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002791;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook HeLa-S3 (repl. 1, 2) Motif finding EP300 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000ECV] [Life stage: Adult] [TFBS]
EP300 • Sigmoid colon NGFTBHUQZ5KR4R • Factorbook34755879 Motif finding Sigmoid colon TFBS Show metadata Download track Track metadata identifier NGFTBHUQZ5KR4R data_source Factorbook Download track Download number_of_intervals 504 bp_covered 7,056 output_type transcription factor binding sites all genome_build hg38 cell_type Sigmoid colon biosample_type Tissue biosample_term_id UBERON:0001159 tissue_category Digestive encode_experiment_id ENCSR313BMV biological_replicate 1 technical_replicate 1_1 antibody EP300 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 9,125 downloaded_date 07/10/2024 release_date 06/15/2017 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF758MFR_SCBTGCGTCABBGC_sorted.bed.gz processed_file_md5 862a9727464c462ee018d6867706864b wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF758MFR_SCBTGCGTCABBGC_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF758MFR_SCBTGCGTCABBGC_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF758MFR_SCBTGCGTCABBGC.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF758MFR_SCBTGCGTCABBGC.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 2775dc70ad353e4f0246ef7bd012f8f5 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens sigmoid colon tissue female adult (53 years);Original_cell_type=sigmoid colon;Lab=Richard Myers, HAIB;System=digestive system;ENCODE_BED_id=ENCFF758MFR;ENCODE_bigBed_id=ENCFF890VSY;PMID=34755879;Motif_sequence=SCBTGCGTCABBGC;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=UBERON:0001159;is_hg38_lifted=no system_category Digestive life_stage Adult track_name Factorbook Sigmoid colon (repl. 1) Motif finding EP300 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR313BMV] [Life stage: Adult] [TFBS]
EP300 • A549 NGFTBI3MA3J763 • Factorbook34755879 Motif finding A549 TFBS Show metadata Download track Track metadata identifier NGFTBI3MA3J763 data_source Factorbook Download track Download number_of_intervals 4,631 bp_covered 64,834 output_type transcription factor binding sites all genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR047EVQ biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EP300 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 70,233 downloaded_date 07/10/2024 release_date 10/27/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF115NXR_WYTGTTTRCWYWRB_sorted.bed.gz processed_file_md5 c65dfbedc7fd92bb75287292929cccfc wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF115NXR_WYTGTTTRCWYWRB_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF115NXR_WYTGTTTRCWYWRB_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF115NXR_WYTGTTTRCWYWRB.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF115NXR_WYTGTTTRCWYWRB.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 54e405d4fefdc7676b514d8c9097a8ff data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens A549 treated with 100 nM dexamethasone (agonist) for 3 hours;Original_cell_type=A549;Lab=Tim Reddy, Duke;System=respiratory system;ENCODE_BED_id=ENCFF115NXR;ENCODE_bigBed_id=ENCFF076BDU;PMID=34755879;Motif_sequence=WYTGTTTRCWYWRB;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name Factorbook A549 (repl. 1, 2) Motif finding EP300 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR047EVQ] [Life stage: Adult] [TFBS]
EP300 • GM12878 NGFTBIA6LRYDPH • Factorbook34755879 Motif finding GM12878 TFBS Show metadata Download track Track metadata identifier NGFTBIA6LRYDPH data_source Factorbook Download track Download number_of_intervals 5,851 bp_covered 46,808 output_type transcription factor binding sites all genome_build hg38 cell_type GM12878 biosample_type Cell line biosample_term_id EFO:0002784 tissue_category Blood encode_experiment_id ENCSR000DZG biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EP300 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 60,781 downloaded_date 07/10/2024 release_date 10/29/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF926AKK_YTGTGGTT_sorted.bed.gz processed_file_md5 94fb7eb08e257db95ce29a2144fdd2ed wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF926AKK_YTGTGGTT_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF926AKK_YTGTGGTT_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF926AKK_YTGTGGTT.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF926AKK_YTGTGGTT.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 9a338993fa8288a5d42a0e2c9e4c841b data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens GM12878;Original_cell_type=GM12878;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF926AKK;ENCODE_bigBed_id=ENCFF039QRE;PMID=34755879;Motif_sequence=YTGTGGTT;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002784;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name Factorbook GM12878 (repl. 1, 2) Motif finding EP300 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000DZG] [TFBS]
EP300 • Tibial nerve NGFTBIAOCKL465 • Factorbook34755879 Motif finding Tibial nerve TFBS Show metadata Download track Track metadata identifier NGFTBIAOCKL465 data_source Factorbook Download track Download number_of_intervals 3,795 bp_covered 75,900 output_type transcription factor binding sites all genome_build hg38 cell_type Tibial nerve biosample_type Tissue biosample_term_id UBERON:0001323 tissue_category Nervous encode_experiment_id ENCSR569SZK biological_replicate 1 technical_replicate 1_1 antibody EP300 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 73,188 downloaded_date 07/10/2024 release_date 06/15/2017 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF052QED_NRGRACAKHNTGTTCYYWBH_sorted.bed.gz processed_file_md5 bfbaf0b416227b0cfb0014e55da2eaf2 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF052QED_NRGRACAKHNTGTTCYYWBH_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF052QED_NRGRACAKHNTGTTCYYWBH_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF052QED_NRGRACAKHNTGTTCYYWBH.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF052QED_NRGRACAKHNTGTTCYYWBH.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 4612f328c35dfecabc6f4eaa2d35a851 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens tibial nerve tissue female adult (51 years);Original_cell_type=tibial nerve;Lab=Richard Myers, HAIB;System=peripheral nervous system;ENCODE_BED_id=ENCFF052QED;ENCODE_bigBed_id=ENCFF952OPK;PMID=34755879;Motif_sequence=NRGRACAKHNTGTTCYYWBH;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=UBERON:0001323;is_hg38_lifted=no system_category Nervous life_stage Adult track_name Factorbook Tibial nerve (repl. 1) Motif finding EP300 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR569SZK] [Life stage: Adult] [TFBS]
EP300 • A549 NGFTBICWY6MK3S • Factorbook34755879 Motif finding A549 TFBS Show metadata Download track Track metadata identifier NGFTBICWY6MK3S data_source Factorbook Download track Download number_of_intervals 3,684 bp_covered 29,472 output_type transcription factor binding sites all genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR358ELZ biological_replicate 1, 3 technical_replicate 1_1, 3_1 antibody EP300 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 37,887 downloaded_date 07/10/2024 release_date 10/27/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF839FGF_RTGACTCA_sorted.bed.gz processed_file_md5 080db77d086d6a02b00715114af2ff1d wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF839FGF_RTGACTCA_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF839FGF_RTGACTCA_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF839FGF_RTGACTCA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF839FGF_RTGACTCA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 ebc7d58b8a8084920bc3b0b0bda54c48 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens A549 treated with 100 nM dexamethasone (agonist) for 1 hour;Original_cell_type=A549;Lab=Tim Reddy, Duke;System=respiratory system;ENCODE_BED_id=ENCFF839FGF;ENCODE_bigBed_id=ENCFF860GWB;PMID=34755879;Motif_sequence=RTGACTCA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name Factorbook A549 (repl. 1, 3) Motif finding EP300 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR358ELZ] [Life stage: Adult] [TFBS]
EP300 • A549 NGFTBIGTD7SO4V • Factorbook34755879 Motif finding A549 TFBS Show metadata Download track Track metadata identifier NGFTBIGTD7SO4V data_source Factorbook Download track Download number_of_intervals 4,190 bp_covered 62,850 output_type transcription factor binding sites all genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR561ZRE biological_replicate 1, 2, 3 technical_replicate 1_1, 2_1, 3_1 antibody EP300 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 66,376 downloaded_date 07/10/2024 release_date 10/27/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF471SZS_GNACABTBTGTHCTB_sorted.bed.gz processed_file_md5 54f839d2beac3d5608232a81b56b0f98 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF471SZS_GNACABTBTGTHCTB_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF471SZS_GNACABTBTGTHCTB_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF471SZS_GNACABTBTGTHCTB.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF471SZS_GNACABTBTGTHCTB.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 282167069bc6b09fc3c4ae4f0b0ba679 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens A549 treated with 100 nM dexamethasone (agonist) for 8 hours;Original_cell_type=A549;Lab=Tim Reddy, Duke;System=respiratory system;ENCODE_BED_id=ENCFF471SZS;ENCODE_bigBed_id=ENCFF834FJS;PMID=34755879;Motif_sequence=GNACABTBTGTHCTB;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name Factorbook A549 (repl. 1, 2, 3) Motif finding EP300 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR561ZRE] [Life stage: Adult] [TFBS]
EP300 • A549 NGFTBIP4XLYEP2 • Factorbook34755879 Motif finding A549 TFBS Show metadata Download track Track metadata identifier NGFTBIP4XLYEP2 data_source Factorbook Download track Download number_of_intervals 3,944 bp_covered 51,272 output_type transcription factor binding sites all genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR792VMN biological_replicate 1, 3 technical_replicate 1_1, 3_1 antibody EP300 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 55,379 downloaded_date 07/10/2024 release_date 10/27/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF797NVI_RTTDTGMAAYMDB_sorted.bed.gz processed_file_md5 ec61b47ed7b12dc65237449e787f8b77 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF797NVI_RTTDTGMAAYMDB_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF797NVI_RTTDTGMAAYMDB_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF797NVI_RTTDTGMAAYMDB.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF797NVI_RTTDTGMAAYMDB.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 8c0f5bb7f8d0c2087c35cbc6c54ce505 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens A549 treated with 100 nM dexamethasone (agonist) for 10 hours;Original_cell_type=A549;Lab=Tim Reddy, Duke;System=respiratory system;ENCODE_BED_id=ENCFF797NVI;ENCODE_bigBed_id=ENCFF666GRL;PMID=34755879;Motif_sequence=RTTDTGMAAYMDB;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name Factorbook A549 (repl. 1, 3) Motif finding EP300 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR792VMN] [Life stage: Adult] [TFBS]
EP300 • H1-hESC NGFTBIP7I427TZ • Factorbook34755879 Motif finding H1-hESC TFBS Show metadata Download track Track metadata identifier NGFTBIP7I427TZ data_source Factorbook Download track Download number_of_intervals 1,217 bp_covered 17,038 output_type transcription factor binding sites all genome_build hg38 cell_type H1-hESC biosample_type Cell line biosample_term_id EFO:0003042 tissue_category Embryo encode_experiment_id ENCSR000BKK biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EP300 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 20,790 downloaded_date 07/10/2024 release_date 07/18/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF244VKF_YGGRMBRDACCAYY_sorted.bed.gz processed_file_md5 d61036fcb135cc0a2692d2deb30835e7 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF244VKF_YGGRMBRDACCAYY_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF244VKF_YGGRMBRDACCAYY_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF244VKF_YGGRMBRDACCAYY.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF244VKF_YGGRMBRDACCAYY.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 53fd145420d99a48f520a72f29c392b6 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens H1;Original_cell_type=H1;Lab=Richard Myers, HAIB;System=NR;ENCODE_BED_id=ENCFF244VKF;ENCODE_bigBed_id=ENCFF927IYK;PMID=34755879;Motif_sequence=YGGRMBRDACCAYY;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0003042;is_hg38_lifted=no system_category Embryo life_stage Unknown track_name Factorbook H1-hESC (repl. 1, 2) Motif finding EP300 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BKK] [TFBS]
EP300 • Transverse colon NGFTBIQCIKXRJL • Factorbook34755879 Motif finding Transverse colon TFBS Show metadata Download track Track metadata identifier NGFTBIQCIKXRJL data_source Factorbook Download track Download number_of_intervals 1,737 bp_covered 24,318 output_type transcription factor binding sites all genome_build hg38 cell_type Transverse colon biosample_type Tissue biosample_term_id UBERON:0001157 tissue_category Digestive encode_experiment_id ENCSR429JTR biological_replicate 1 technical_replicate 1_1 antibody EP300 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 29,681 downloaded_date 07/10/2024 release_date 06/15/2017 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF754LGO_VCTTCYAGGAAMWG_sorted.bed.gz processed_file_md5 505cebeae8345d0c204176043d9f2a36 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF754LGO_VCTTCYAGGAAMWG_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF754LGO_VCTTCYAGGAAMWG_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF754LGO_VCTTCYAGGAAMWG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF754LGO_VCTTCYAGGAAMWG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 55cb37eb3f7ba773c9d3801e43f2361f data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens transverse colon tissue male adult (37 years);Original_cell_type=transverse colon;Lab=Richard Myers, HAIB;System=digestive system;ENCODE_BED_id=ENCFF754LGO;ENCODE_bigBed_id=ENCFF258CAS;PMID=34755879;Motif_sequence=VCTTCYAGGAAMWG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=UBERON:0001157;is_hg38_lifted=no system_category Digestive life_stage Adult track_name Factorbook Transverse colon (repl. 1) Motif finding EP300 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR429JTR] [Life stage: Adult] [TFBS]
EP300 • A549 NGFTBIQDRUKYEM • Factorbook34755879 Motif finding A549 TFBS Show metadata Download track Track metadata identifier NGFTBIQDRUKYEM data_source Factorbook Download track Download number_of_intervals 10,640 bp_covered 85,120 output_type transcription factor binding sites all genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR000BPW biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EP300 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 93,414 downloaded_date 07/10/2024 release_date 02/29/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF739WIF_TGACTCAB_sorted.bed.gz processed_file_md5 4ad2057607ba3a073342409327d97366 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF739WIF_TGACTCAB_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF739WIF_TGACTCAB_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF739WIF_TGACTCAB.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF739WIF_TGACTCAB.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 6c285e542fe6ddc49f44537f0fdb5293 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens A549 treated with 0.02% ethanol for 1 hour;Original_cell_type=A549;Lab=Richard Myers, HAIB;System=respiratory system;ENCODE_BED_id=ENCFF739WIF;ENCODE_bigBed_id=ENCFF228VWC;PMID=34755879;Motif_sequence=TGACTCAB;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name Factorbook A549 (repl. 1, 2) Motif finding EP300 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BPW] [Life stage: Adult] [TFBS]
EP300 • Ovary NGFTBJAO6EJ4BN • Factorbook34755879 Motif finding Ovary TFBS Show metadata Download track Track metadata identifier NGFTBJAO6EJ4BN data_source Factorbook Download track Download number_of_intervals 562 bp_covered 5,058 output_type transcription factor binding sites all genome_build hg38 cell_type Ovary biosample_type Tissue biosample_term_id NCIT:C12404 tissue_category Female Reproductive encode_experiment_id ENCSR696LQU biological_replicate 1 technical_replicate 1_1 antibody EP300 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 7,751 downloaded_date 07/10/2024 release_date 06/15/2017 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF917NDE_ATTGCWYAA_sorted.bed.gz processed_file_md5 594bfbd7e980a0df128a45d35a016814 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF917NDE_ATTGCWYAA_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF917NDE_ATTGCWYAA_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF917NDE_ATTGCWYAA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF917NDE_ATTGCWYAA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 8ea707ad4c033613313bbfc1ced7bf0d data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens ovary tissue female adult (53 years);Original_cell_type=ovary;Lab=Richard Myers, HAIB;System=reproductive system;ENCODE_BED_id=ENCFF917NDE;ENCODE_bigBed_id=ENCFF767VVG;PMID=34755879;Motif_sequence=ATTGCWYAA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=UBERON:0000992;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook Ovary (repl. 1) Motif finding EP300 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR696LQU] [Life stage: Adult] [TFBS]
EP300 • A549 NGFTBJBGKXZKQO • Factorbook34755879 Motif finding A549 TFBS Show metadata Download track Track metadata identifier NGFTBJBGKXZKQO data_source Factorbook Download track Download number_of_intervals 6,290 bp_covered 50,320 output_type transcription factor binding sites all genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR610RKF biological_replicate 1, 2, 3 technical_replicate 1_1, 2_1, 3_1 antibody EP300 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 56,880 downloaded_date 07/10/2024 release_date 10/27/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF176DIO_VTGACTCA_sorted.bed.gz processed_file_md5 fb375b990edd4c6e8c86b79465c9c33d wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF176DIO_VTGACTCA_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF176DIO_VTGACTCA_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF176DIO_VTGACTCA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF176DIO_VTGACTCA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 7106719de83d4be408b5c4e2108b29b1 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens A549 treated with 100 nM dexamethasone (agonist) for 5 hours;Original_cell_type=A549;Lab=Tim Reddy, Duke;System=respiratory system;ENCODE_BED_id=ENCFF176DIO;ENCODE_bigBed_id=ENCFF987JCN;PMID=34755879;Motif_sequence=VTGACTCA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name Factorbook A549 (repl. 1, 2, 3) Motif finding EP300 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR610RKF] [Life stage: Adult] [TFBS]
EP300 • A549 NGFTBJGHSUPRXU • Factorbook34755879 Motif finding A549 TFBS Show metadata Download track Track metadata identifier NGFTBJGHSUPRXU data_source Factorbook Download track Download number_of_intervals 10,733 bp_covered 160,995 output_type transcription factor binding sites all genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR044IFH biological_replicate 1, 2, 3 technical_replicate 1_1, 2_1, 3_1 antibody EP300 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 157,708 downloaded_date 07/10/2024 release_date 10/19/2017 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF437MOR_RGMACAGHVTGTYCT_sorted.bed.gz processed_file_md5 5e1b60c04be0ab4a5047310af7e2d851 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF437MOR_RGMACAGHVTGTYCT_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF437MOR_RGMACAGHVTGTYCT_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF437MOR_RGMACAGHVTGTYCT.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF437MOR_RGMACAGHVTGTYCT.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 0987834221d345b0effb70e249382bc1 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens A549 treated with 100 nM dexamethasone (agonist) for 25 minutes;Original_cell_type=A549;Lab=Tim Reddy, Duke;System=respiratory system;ENCODE_BED_id=ENCFF437MOR;ENCODE_bigBed_id=ENCFF642COK;PMID=34755879;Motif_sequence=RGMACAGHVTGTYCT;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name Factorbook A549 (repl. 1, 2, 3) Motif finding EP300 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR044IFH] [Life stage: Adult] [TFBS]