EP300 • A549 NGFTBJIQU6POLA • Factorbook34755879 Motif finding A549 TFBS Show metadata Download track Track metadata identifier NGFTBJIQU6POLA data_source Factorbook Download track Download number_of_intervals 4,831 bp_covered 43,479 output_type transcription factor binding sites all genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR124VXG biological_replicate 1, 2, 3 technical_replicate 1_1, 2_1, 3_1 antibody EP300 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 52,225 downloaded_date 07/10/2024 release_date 10/27/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF758FGU_VTGACTCAB_sorted.bed.gz processed_file_md5 f07c32c61ac6f592a6c275d7a2d7bf8b wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF758FGU_VTGACTCAB_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF758FGU_VTGACTCAB_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF758FGU_VTGACTCAB.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF758FGU_VTGACTCAB.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 1d648e1eb58ee100c5bc5eb7ddbb8958 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens A549 treated with 100 nM dexamethasone (agonist) for 12 hours;Original_cell_type=A549;Lab=Tim Reddy, Duke;System=respiratory system;ENCODE_BED_id=ENCFF758FGU;ENCODE_bigBed_id=ENCFF415SPE;PMID=34755879;Motif_sequence=VTGACTCAB;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name Factorbook A549 (repl. 1, 2, 3) Motif finding EP300 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR124VXG] [Life stage: Adult] [TFBS]
EP300 • SK-N-SH NGFTBJQHGR6YSF • Factorbook34755879 Motif finding SK-N-SH TFBS Show metadata Download track Track metadata identifier NGFTBJQHGR6YSF data_source Factorbook Download track Download number_of_intervals 13,632 bp_covered 204,480 output_type transcription factor binding sites all genome_build hg38 cell_type SK-N-SH biosample_type Cell line biosample_term_id EFO:0003072 tissue_category Brain encode_experiment_id ENCSR000EHV biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EP300 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 224,436 downloaded_date 07/10/2024 release_date 08/20/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF163XCA_HTGANARAADMCAGA_sorted.bed.gz processed_file_md5 c26ea0655051bdda74b63333d77e7af1 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF163XCA_HTGANARAADMCAGA_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF163XCA_HTGANARAADMCAGA_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF163XCA_HTGANARAADMCAGA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF163XCA_HTGANARAADMCAGA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 b0cd190df49344c1fa0be361ec3de999 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens SK-N-SH;Original_cell_type=SK-N-SH;Lab=Michael Snyder, Stanford;System=central nervous system;ENCODE_BED_id=ENCFF163XCA;ENCODE_bigBed_id=ENCFF829RWA;PMID=34755879;Motif_sequence=HTGANARAADMCAGA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0003072;is_hg38_lifted=no system_category Nervous life_stage Child track_name Factorbook SK-N-SH (repl. 1, 2) Motif finding EP300 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000EHV] [Life stage: Child] [TFBS]
EP300 • K562 NGFTBJRXDG3KHT • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBJRXDG3KHT data_source Factorbook Download track Download number_of_intervals 2,277 bp_covered 68,310 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR000EGE biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EP300 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 55,975 downloaded_date 07/10/2024 release_date 05/14/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF702XPO_CTTATCAHRGKSWCCAGACAYRGTTCCTGC_sorted.bed.gz processed_file_md5 24582bbcb770d3e5f7a10b7011e0158b wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF702XPO_CTTATCAHRGKSWCCAGACAYRGTTCCTGC_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF702XPO_CTTATCAHRGKSWCCAGACAYRGTTCCTGC_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF702XPO_CTTATCAHRGKSWCCAGACAYRGTTCCTGC.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF702XPO_CTTATCAHRGKSWCCAGACAYRGTTCCTGC.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 0cfd941a7865111f8813e3034e48d800 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF702XPO;ENCODE_bigBed_id=ENCFF226VMS;PMID=34755879;Motif_sequence=CTTATCAHRGKSWCCAGACAYRGTTCCTGC;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding EP300 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000EGE] [Life stage: Adult] [TFBS]
EP300 • Muscularis mucosa NGFTBJZU5KQBZI • Factorbook34755879 Motif finding Muscularis mucosa TFBS Show metadata Download track Track metadata identifier NGFTBJZU5KQBZI data_source Factorbook Download track Download number_of_intervals 2,525 bp_covered 50,500 output_type transcription factor binding sites all genome_build hg38 cell_type Muscularis mucosa biosample_type Tissue biosample_term_id UBERON:0006676 tissue_category Digestive encode_experiment_id ENCSR360BLQ biological_replicate 1 technical_replicate 1_1 antibody EP300 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 52,143 downloaded_date 07/10/2024 release_date 06/15/2017 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF801RXA_NRRGAACASAATGTYCYNKB_sorted.bed.gz processed_file_md5 b8cc0aba728f52e3b021bc46d16b1dcd wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF801RXA_NRRGAACASAATGTYCYNKB_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF801RXA_NRRGAACASAATGTYCYNKB_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF801RXA_NRRGAACASAATGTYCYNKB.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF801RXA_NRRGAACASAATGTYCYNKB.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 a87df719f1d1e148137261f43c1bc07e data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens esophagus muscularis mucosa tissue male adult (37 years);Original_cell_type=esophagus muscularis mucosa;Lab=Richard Myers, HAIB;System=digestive system,musculature;ENCODE_BED_id=ENCFF801RXA;ENCODE_bigBed_id=ENCFF406RGZ;PMID=34755879;Motif_sequence=NRRGAACASAATGTYCYNKB;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=UBERON:0004648;is_hg38_lifted=no system_category Digestive life_stage Adult track_name Factorbook Muscularis mucosa (repl. 1) Motif finding EP300 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR360BLQ] [Life stage: Adult] [TFBS]
EP300 • A549 NGFTBK52FF2KIZ • Factorbook34755879 Motif finding A549 TFBS Show metadata Download track Track metadata identifier NGFTBK52FF2KIZ data_source Factorbook Download track Download number_of_intervals 4,665 bp_covered 37,320 output_type transcription factor binding sites all genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR792VMN biological_replicate 1, 3 technical_replicate 1_1, 3_1 antibody EP300 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 42,500 downloaded_date 07/10/2024 release_date 10/27/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF797NVI_VTGACTCA_sorted.bed.gz processed_file_md5 4d915dbe7a86eb1cfc68228014baed13 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF797NVI_VTGACTCA_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF797NVI_VTGACTCA_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF797NVI_VTGACTCA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF797NVI_VTGACTCA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 2cb0928fe49eb19b4d37ff36fde9a322 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens A549 treated with 100 nM dexamethasone (agonist) for 10 hours;Original_cell_type=A549;Lab=Tim Reddy, Duke;System=respiratory system;ENCODE_BED_id=ENCFF797NVI;ENCODE_bigBed_id=ENCFF666GRL;PMID=34755879;Motif_sequence=VTGACTCA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name Factorbook A549 (repl. 1, 3) Motif finding EP300 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR792VMN] [Life stage: Adult] [TFBS]
EP300 • Sigmoid colon NGFTBKAFFKF2CD • Factorbook34755879 Motif finding Sigmoid colon TFBS Show metadata Download track Track metadata identifier NGFTBKAFFKF2CD data_source Factorbook Download track Download number_of_intervals 1,276 bp_covered 11,484 output_type transcription factor binding sites all genome_build hg38 cell_type Sigmoid colon biosample_type Tissue biosample_term_id UBERON:0001159 tissue_category Digestive encode_experiment_id ENCSR244ZAO biological_replicate 1 technical_replicate 1_1 antibody EP300 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 15,589 downloaded_date 07/10/2024 release_date 06/15/2017 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF992RST_TRTTTAYAK_sorted.bed.gz processed_file_md5 38bd6cda9b85b74731060bd7a6cabd73 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF992RST_TRTTTAYAK_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF992RST_TRTTTAYAK_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF992RST_TRTTTAYAK.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF992RST_TRTTTAYAK.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 5495a2732b73a6d7c4948819cfb7ca4e data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens sigmoid colon tissue female adult (51 years);Original_cell_type=sigmoid colon;Lab=Richard Myers, HAIB;System=digestive system;ENCODE_BED_id=ENCFF992RST;ENCODE_bigBed_id=ENCFF953ZIP;PMID=34755879;Motif_sequence=TRTTTAYAK;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=UBERON:0001159;is_hg38_lifted=no system_category Digestive life_stage Adult track_name Factorbook Sigmoid colon (repl. 1) Motif finding EP300 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR244ZAO] [Life stage: Adult] [TFBS]
EP300 • MCF-7 NGFTBKD4HK3JY4 • Factorbook34755879 Motif finding MCF-7 TFBS Show metadata Download track Track metadata identifier NGFTBKD4HK3JY4 data_source Factorbook Download track Download number_of_intervals 3,626 bp_covered 29,008 output_type transcription factor binding sites all genome_build hg38 cell_type MCF-7 biosample_type Cell line biosample_term_id EFO:0001203 tissue_category Breast encode_experiment_id ENCSR000BTR biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EP300 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 38,482 downloaded_date 07/10/2024 release_date 09/10/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF290DJX_CTGRGTCA_sorted.bed.gz processed_file_md5 bbd7dc1a88ef66b7c1a1b377c8944b8d wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF290DJX_CTGRGTCA_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF290DJX_CTGRGTCA_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF290DJX_CTGRGTCA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF290DJX_CTGRGTCA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 22a80288a549ab232ca25656e248734d data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens MCF-7;Original_cell_type=MCF-7;Lab=Richard Myers, HAIB;System=exocrine system,integumental system;ENCODE_BED_id=ENCFF290DJX;ENCODE_bigBed_id=ENCFF508OAU;PMID=34755879;Motif_sequence=CTGRGTCA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001203;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook MCF-7 (repl. 1, 2) Motif finding EP300 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BTR] [Life stage: Adult] [TFBS]
EP300 • Lung NGFTBKHHIKEZTF • Factorbook34755879 Motif finding Lung TFBS Show metadata Download track Track metadata identifier NGFTBKHHIKEZTF data_source Factorbook Download track Download number_of_intervals 1,372 bp_covered 20,580 output_type transcription factor binding sites all genome_build hg38 cell_type Lung biosample_type Tissue biosample_term_id UBERON:0002048 tissue_category Lung encode_experiment_id ENCSR290QBB biological_replicate 1 technical_replicate 1_1 antibody EP300 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 22,140 downloaded_date 07/10/2024 release_date 06/15/2017 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF576FCY_RGRACAGRATGTYCY_sorted.bed.gz processed_file_md5 803141210c58ae84fcdb3eb992817c60 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF576FCY_RGRACAGRATGTYCY_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF576FCY_RGRACAGRATGTYCY_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF576FCY_RGRACAGRATGTYCY.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF576FCY_RGRACAGRATGTYCY.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 c2c9e443472de3f5c74369a56fffaa75 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens upper lobe of left lung tissue male adult (54 years);Original_cell_type=upper lobe of left lung;Lab=Richard Myers, HAIB;System=respiratory system;ENCODE_BED_id=ENCFF576FCY;ENCODE_bigBed_id=ENCFF306FRW;PMID=34755879;Motif_sequence=RGRACAGRATGTYCY;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=UBERON:0008952;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name Factorbook Lung (repl. 1) Motif finding EP300 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR290QBB] [Life stage: Adult] [TFBS]
EP300 • H1-hESC NGFTBKOTJM6ABZ • Factorbook34755879 Motif finding H1-hESC TFBS Show metadata Download track Track metadata identifier NGFTBKOTJM6ABZ data_source Factorbook Download track Download number_of_intervals 697 bp_covered 9,061 output_type transcription factor binding sites all genome_build hg38 cell_type H1-hESC biosample_type Cell line biosample_term_id EFO:0003042 tissue_category Embryo encode_experiment_id ENCSR000AUQ biological_replicate 1 technical_replicate 1_1 antibody EP300 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 10,523 downloaded_date 07/10/2024 release_date 08/06/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF583FUX_TCTTATGCRGTTG_sorted.bed.gz processed_file_md5 fa6321eea641c235ebe367583ad51849 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF583FUX_TCTTATGCRGTTG_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF583FUX_TCTTATGCRGTTG_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF583FUX_TCTTATGCRGTTG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF583FUX_TCTTATGCRGTTG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 c9842fa07513f3211729445ba0de3c9d data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens H1;Original_cell_type=H1;Lab=Bradley Bernstein, Broad;System=NR;ENCODE_BED_id=ENCFF583FUX;ENCODE_bigBed_id=ENCFF937OPV;PMID=34755879;Motif_sequence=TCTTATGCRGTTG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0003042;is_hg38_lifted=no system_category Embryo life_stage Unknown track_name Factorbook H1-hESC (repl. 1) Motif finding EP300 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000AUQ] [TFBS]
EP300 • A549 NGFTBKTMUZCSI5 • Factorbook34755879 Motif finding A549 TFBS Show metadata Download track Track metadata identifier NGFTBKTMUZCSI5 data_source Factorbook Download track Download number_of_intervals 2,872 bp_covered 31,592 output_type transcription factor binding sites all genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR467VXG biological_replicate 1, 2, 3 technical_replicate 1_1, 2_1, 3_1 antibody EP300 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 35,402 downloaded_date 07/10/2024 release_date 10/27/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF167GZE_VTTRTGMAAYH_sorted.bed.gz processed_file_md5 4e6548f9b2e0340db4eb92ffe8d1f498 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF167GZE_VTTRTGMAAYH_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF167GZE_VTTRTGMAAYH_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF167GZE_VTTRTGMAAYH.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF167GZE_VTTRTGMAAYH.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 113dcacfa5bff533e21ef7972b9153b7 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens A549 treated with 100 nM dexamethasone (agonist) for 7 hours;Original_cell_type=A549;Lab=Tim Reddy, Duke;System=respiratory system;ENCODE_BED_id=ENCFF167GZE;ENCODE_bigBed_id=ENCFF577ZRN;PMID=34755879;Motif_sequence=VTTRTGMAAYH;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name Factorbook A549 (repl. 1, 2, 3) Motif finding EP300 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR467VXG] [Life stage: Adult] [TFBS]
EP300 • Ishikawa NGFTBKVUSI7XRZ • Factorbook34755879 Motif finding Ishikawa TFBS Show metadata Download track Track metadata identifier NGFTBKVUSI7XRZ data_source Factorbook Download track Download number_of_intervals 13,891 bp_covered 125,019 output_type transcription factor binding sites all genome_build hg38 cell_type Ishikawa biosample_type Cell line biosample_term_id EFO:0005718 tissue_category Female Reproductive encode_experiment_id ENCSR000BUE biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EP300 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 157,794 downloaded_date 07/10/2024 release_date 09/10/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF191GQE_CCTGCTGDG_sorted.bed.gz processed_file_md5 286d1b4cf9d5e53a256855f9562e45f5 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF191GQE_CCTGCTGDG_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF191GQE_CCTGCTGDG_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF191GQE_CCTGCTGDG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF191GQE_CCTGCTGDG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 197088c785d28e10a66ab983f9eeb141 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens Ishikawa;Original_cell_type=Ishikawa;Lab=Richard Myers, HAIB;System=reproductive system;ENCODE_BED_id=ENCFF191GQE;ENCODE_bigBed_id=ENCFF364ZWT;PMID=34755879;Motif_sequence=CCTGCTGDG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0005718;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook Ishikawa (repl. 1, 2) Motif finding EP300 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BUE] [Life stage: Adult] [TFBS]
EP300 • Lung NGFTBKXPYQBNWW • Factorbook34755879 Motif finding Lung TFBS Show metadata Download track Track metadata identifier NGFTBKXPYQBNWW data_source Factorbook Download track Download number_of_intervals 3,112 bp_covered 24,896 output_type transcription factor binding sites all genome_build hg38 cell_type Lung biosample_type Tissue biosample_term_id UBERON:0002048 tissue_category Lung encode_experiment_id ENCSR828PZH biological_replicate 1 technical_replicate 1_1 antibody EP300 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 32,616 downloaded_date 07/10/2024 release_date 06/15/2017 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF976JNG_GGAARTGA_sorted.bed.gz processed_file_md5 76d5b69a85db7eee8441097884010675 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF976JNG_GGAARTGA_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF976JNG_GGAARTGA_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF976JNG_GGAARTGA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF976JNG_GGAARTGA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 ab90d9bc899b033edaa48de77f0ec5aa data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens upper lobe of left lung tissue male adult (37 years);Original_cell_type=upper lobe of left lung;Lab=Richard Myers, HAIB;System=respiratory system;ENCODE_BED_id=ENCFF976JNG;ENCODE_bigBed_id=ENCFF720RAR;PMID=34755879;Motif_sequence=GGAARTGA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=UBERON:0008952;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name Factorbook Lung (repl. 1) Motif finding EP300 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR828PZH] [Life stage: Adult] [TFBS]
EP300 • A549 NGFTBKYZCFNI26 • Factorbook34755879 Motif finding A549 TFBS Show metadata Download track Track metadata identifier NGFTBKYZCFNI26 data_source Factorbook Download track Download number_of_intervals 10,448 bp_covered 114,928 output_type transcription factor binding sites all genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR000BPW biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EP300 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 124,892 downloaded_date 07/10/2024 release_date 02/29/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF739WIF_HWAAGYAAAYA_sorted.bed.gz processed_file_md5 38ba3a63cc2efac81b6c861abccb45d9 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF739WIF_HWAAGYAAAYA_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF739WIF_HWAAGYAAAYA_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF739WIF_HWAAGYAAAYA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF739WIF_HWAAGYAAAYA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 a8f8b7a6e3a9c676ac285aef13f81fc5 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens A549 treated with 0.02% ethanol for 1 hour;Original_cell_type=A549;Lab=Richard Myers, HAIB;System=respiratory system;ENCODE_BED_id=ENCFF739WIF;ENCODE_bigBed_id=ENCFF228VWC;PMID=34755879;Motif_sequence=HWAAGYAAAYA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name Factorbook A549 (repl. 1, 2) Motif finding EP300 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BPW] [Life stage: Adult] [TFBS]
EP300 • Ovary NGFTBLC3CYJDR4 • Factorbook34755879 Motif finding Ovary TFBS Show metadata Download track Track metadata identifier NGFTBLC3CYJDR4 data_source Factorbook Download track Download number_of_intervals 1,777 bp_covered 19,547 output_type transcription factor binding sites all genome_build hg38 cell_type Ovary biosample_type Tissue biosample_term_id NCIT:C12404 tissue_category Female Reproductive encode_experiment_id ENCSR696LQU biological_replicate 1 technical_replicate 1_1 antibody EP300 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 26,563 downloaded_date 07/10/2024 release_date 06/15/2017 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF917NDE_AYTTCCCRGMA_sorted.bed.gz processed_file_md5 ac79db9c843a04cea5260c4f5d327277 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF917NDE_AYTTCCCRGMA_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF917NDE_AYTTCCCRGMA_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF917NDE_AYTTCCCRGMA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF917NDE_AYTTCCCRGMA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 15ca05b3bc55a3cb6533a5ce7282fd26 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens ovary tissue female adult (53 years);Original_cell_type=ovary;Lab=Richard Myers, HAIB;System=reproductive system;ENCODE_BED_id=ENCFF917NDE;ENCODE_bigBed_id=ENCFF767VVG;PMID=34755879;Motif_sequence=AYTTCCCRGMA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=UBERON:0000992;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook Ovary (repl. 1) Motif finding EP300 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR696LQU] [Life stage: Adult] [TFBS]
EP300 • GM12878 NGFTBLJ6Z6OETU • Factorbook34755879 Motif finding GM12878 TFBS Show metadata Download track Track metadata identifier NGFTBLJ6Z6OETU data_source Factorbook Download track Download number_of_intervals 4,662 bp_covered 69,930 output_type transcription factor binding sites all genome_build hg38 cell_type GM12878 biosample_type Cell line biosample_term_id EFO:0002784 tissue_category Blood encode_experiment_id ENCSR000DZD biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EP300 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 76,420 downloaded_date 07/10/2024 release_date 05/14/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF718TWQ_TTTNRWWATGASTCA_sorted.bed.gz processed_file_md5 875b3cc17713e98179566710a39a9740 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF718TWQ_TTTNRWWATGASTCA_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF718TWQ_TTTNRWWATGASTCA_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF718TWQ_TTTNRWWATGASTCA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF718TWQ_TTTNRWWATGASTCA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 d8b1ca434a57c2f0e2449ca82c75ffc7 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens GM12878;Original_cell_type=GM12878;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF718TWQ;ENCODE_bigBed_id=ENCFF242HCG;PMID=34755879;Motif_sequence=TTTNRWWATGASTCA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002784;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name Factorbook GM12878 (repl. 1, 2) Motif finding EP300 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000DZD] [TFBS]
EP300 • Sigmoid colon NGFTBLJXMMRBIY • Factorbook34755879 Motif finding Sigmoid colon TFBS Show metadata Download track Track metadata identifier NGFTBLJXMMRBIY data_source Factorbook Download track Download number_of_intervals 768 bp_covered 5,376 output_type transcription factor binding sites all genome_build hg38 cell_type Sigmoid colon biosample_type Tissue biosample_term_id UBERON:0001159 tissue_category Digestive encode_experiment_id ENCSR923WJS biological_replicate 1 technical_replicate 1_1 antibody EP300 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 7,975 downloaded_date 07/10/2024 release_date 06/15/2017 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF957TMT_TGTTTAY_sorted.bed.gz processed_file_md5 7a609930d89f16d9d64fb427197c15c3 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF957TMT_TGTTTAY_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF957TMT_TGTTTAY_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF957TMT_TGTTTAY.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF957TMT_TGTTTAY.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 83a2e095ea59c5100ee70559e16348db data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens sigmoid colon tissue male adult (54 years);Original_cell_type=sigmoid colon;Lab=Richard Myers, HAIB;System=digestive system;ENCODE_BED_id=ENCFF957TMT;ENCODE_bigBed_id=ENCFF682PXQ;PMID=34755879;Motif_sequence=TGTTTAY;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=UBERON:0001159;is_hg38_lifted=no system_category Digestive life_stage Adult track_name Factorbook Sigmoid colon (repl. 1) Motif finding EP300 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR923WJS] [Life stage: Adult] [TFBS]
EP300 • A549 NGFTBLLN2C42AQ • Factorbook34755879 Motif finding A549 TFBS Show metadata Download track Track metadata identifier NGFTBLLN2C42AQ data_source Factorbook Download track Download number_of_intervals 6,266 bp_covered 50,128 output_type transcription factor binding sites all genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR561ZRE biological_replicate 1, 2, 3 technical_replicate 1_1, 2_1, 3_1 antibody EP300 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 59,793 downloaded_date 07/10/2024 release_date 10/27/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF471SZS_RTGACTCA_sorted.bed.gz processed_file_md5 538c9d72a3a024ece86f10cc5b53ef03 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF471SZS_RTGACTCA_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF471SZS_RTGACTCA_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF471SZS_RTGACTCA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF471SZS_RTGACTCA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 145d76e164990794366f5f3ba6b637c4 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens A549 treated with 100 nM dexamethasone (agonist) for 8 hours;Original_cell_type=A549;Lab=Tim Reddy, Duke;System=respiratory system;ENCODE_BED_id=ENCFF471SZS;ENCODE_bigBed_id=ENCFF834FJS;PMID=34755879;Motif_sequence=RTGACTCA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name Factorbook A549 (repl. 1, 2, 3) Motif finding EP300 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR561ZRE] [Life stage: Adult] [TFBS]
EP300 • Lung NGFTBLMZMFMG6Q • Factorbook34755879 Motif finding Lung TFBS Show metadata Download track Track metadata identifier NGFTBLMZMFMG6Q data_source Factorbook Download track Download number_of_intervals 6,096 bp_covered 115,824 output_type transcription factor binding sites all genome_build hg38 cell_type Lung biosample_type Tissue biosample_term_id UBERON:0002048 tissue_category Lung encode_experiment_id ENCSR000MMZ biological_replicate 1 technical_replicate 1_1 antibody EP300 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 116,063 downloaded_date 07/10/2024 release_date 06/15/2017 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF833AES_RRGDACAGRATGTYCYNDG_sorted.bed.gz processed_file_md5 3c13786e683f94364a84cc8e4726f271 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF833AES_RRGDACAGRATGTYCYNDG_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF833AES_RRGDACAGRATGTYCYNDG_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF833AES_RRGDACAGRATGTYCYNDG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF833AES_RRGDACAGRATGTYCYNDG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 9609455c3cbc07410ea11e4ba48d8310 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens upper lobe of left lung tissue female adult (51 years);Original_cell_type=upper lobe of left lung;Lab=Richard Myers, HAIB;System=respiratory system;ENCODE_BED_id=ENCFF833AES;ENCODE_bigBed_id=ENCFF024QBJ;PMID=34755879;Motif_sequence=RRGDACAGRATGTYCYNDG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=UBERON:0008952;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name Factorbook Lung (repl. 1) Motif finding EP300 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000MMZ] [Life stage: Adult] [TFBS]
EP300 • HepG2 NGFTBLPJH23ACY • Factorbook34755879 Motif finding HepG2 TFBS Show metadata Download track Track metadata identifier NGFTBLPJH23ACY data_source Factorbook Download track Download number_of_intervals 6,832 bp_covered 75,152 output_type transcription factor binding sites all genome_build hg38 cell_type HepG2 biosample_type Cell line biosample_term_id EFO:0001187 tissue_category Liver encode_experiment_id ENCSR000EDV biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EP300 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 101,179 downloaded_date 07/10/2024 release_date 10/29/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF488UHZ_GGGGGWGGGGG_sorted.bed.gz processed_file_md5 3716293d817048ce44431f2db04e89e7 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF488UHZ_GGGGGWGGGGG_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF488UHZ_GGGGGWGGGGG_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF488UHZ_GGGGGWGGGGG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF488UHZ_GGGGGWGGGGG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 b2adb9b996cce8361e3c1c1b87bf01d6 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens HepG2;Original_cell_type=HepG2;Lab=Michael Snyder, Stanford;System=exocrine system,endocrine system,digestive system;ENCODE_BED_id=ENCFF488UHZ;ENCODE_bigBed_id=ENCFF251RXO;PMID=34755879;Motif_sequence=GGGGGWGGGGG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001187;is_hg38_lifted=no system_category Digestive life_stage Child track_name Factorbook HepG2 (repl. 1, 2) Motif finding EP300 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000EDV] [Life stage: Child] [TFBS]
EP300 • T47D NGFTBLQV753O3G • Factorbook34755879 Motif finding T47D TFBS Show metadata Download track Track metadata identifier NGFTBLQV753O3G data_source Factorbook Download track Download number_of_intervals 3,354 bp_covered 26,832 output_type transcription factor binding sites all genome_build hg38 cell_type T47D biosample_type Cell line biosample_term_id EFO:0001247 tissue_category Breast encode_experiment_id ENCSR000BLM biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EP300 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 35,057 downloaded_date 07/10/2024 release_date 07/18/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF387ZTS_RCATTCCW_sorted.bed.gz processed_file_md5 bc55b4266aee877c0e6b5c8099f2f0cf wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF387ZTS_RCATTCCW_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF387ZTS_RCATTCCW_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF387ZTS_RCATTCCW.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF387ZTS_RCATTCCW.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 033e9e9d258efc981843108c2ddbbf13 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens T47D treated with 0.02% dimethyl sulfoxide for 1 hour;Original_cell_type=T47D;Lab=Richard Myers, HAIB;System=exocrine system,integumental system;ENCODE_BED_id=ENCFF387ZTS;ENCODE_bigBed_id=ENCFF456VFC;PMID=34755879;Motif_sequence=RCATTCCW;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001247;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook T47D (repl. 1, 2) Motif finding EP300 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BLM] [Life stage: Adult] [TFBS]