EP300 • SK-N-SH NGFTBTKLF4TYPU • Factorbook34755879 Motif finding SK-N-SH TFBS Show metadata Download track Track metadata identifier NGFTBTKLF4TYPU data_source Factorbook Download track Download number_of_intervals 5,463 bp_covered 43,704 output_type transcription factor binding sites all genome_build hg38 cell_type SK-N-SH biosample_type Cell line biosample_term_id EFO:0003072 tissue_category Brain encode_experiment_id ENCSR000EHV biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EP300 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 59,864 downloaded_date 07/10/2024 release_date 08/20/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF163XCA_TBTTATCW_sorted.bed.gz processed_file_md5 f6b6daaca629bf07649c3746a1ff1f95 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF163XCA_TBTTATCW_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF163XCA_TBTTATCW_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF163XCA_TBTTATCW.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF163XCA_TBTTATCW.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 bb7f7d099612afadeae314e949e00ba7 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens SK-N-SH;Original_cell_type=SK-N-SH;Lab=Michael Snyder, Stanford;System=central nervous system;ENCODE_BED_id=ENCFF163XCA;ENCODE_bigBed_id=ENCFF829RWA;PMID=34755879;Motif_sequence=TBTTATCW;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0003072;is_hg38_lifted=no system_category Nervous life_stage Child track_name Factorbook SK-N-SH (repl. 1, 2) Motif finding EP300 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000EHV] [Life stage: Child] [TFBS]
EP300 • K562 NGFTBTKWT5YSE2 • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBTKWT5YSE2 data_source Factorbook Download track Download number_of_intervals 643 bp_covered 6,430 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR000EGY biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EP300 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 9,449 downloaded_date 07/10/2024 release_date 10/29/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF821MKR_BYAACTGCCA_sorted.bed.gz processed_file_md5 2a25fb6ce6c745cd8233f0348638ed6e wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF821MKR_BYAACTGCCA_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF821MKR_BYAACTGCCA_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF821MKR_BYAACTGCCA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF821MKR_BYAACTGCCA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 ef8a520c5445071b2b7254f1705c8e9b data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF821MKR;ENCODE_bigBed_id=ENCFF696URH;PMID=34755879;Motif_sequence=BYAACTGCCA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding EP300 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000EGY] [Life stage: Adult] [TFBS]
EP300 • A549 NGFTBTLQ7MMBKZ • Factorbook34755879 Motif finding A549 TFBS Show metadata Download track Track metadata identifier NGFTBTLQ7MMBKZ data_source Factorbook Download track Download number_of_intervals 1,412 bp_covered 21,180 output_type transcription factor binding sites all genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR770OTI biological_replicate 1, 2, 3 technical_replicate 1_1, 2_1, 3_1 antibody EP300 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 22,510 downloaded_date 07/10/2024 release_date 10/27/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF946TLM_YWCTGTTTRCWYARB_sorted.bed.gz processed_file_md5 b66e9b314b067dfc80bb3033c2bfeeb3 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF946TLM_YWCTGTTTRCWYARB_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF946TLM_YWCTGTTTRCWYARB_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF946TLM_YWCTGTTTRCWYARB.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF946TLM_YWCTGTTTRCWYARB.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 1a3e30de775e3568347fa86ffa31d7ca data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens A549 treated with 100 nM dexamethasone (agonist) for 2 hours;Original_cell_type=A549;Lab=Tim Reddy, Duke;System=respiratory system;ENCODE_BED_id=ENCFF946TLM;ENCODE_bigBed_id=ENCFF222ULN;PMID=34755879;Motif_sequence=YWCTGTTTRCWYARB;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name Factorbook A549 (repl. 1, 2, 3) Motif finding EP300 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR770OTI] [Life stage: Adult] [TFBS]
EP300 • Skin NGFTBTRNU6MTJY • Factorbook34755879 Motif finding Skin TFBS Show metadata Download track Track metadata identifier NGFTBTRNU6MTJY data_source Factorbook Download track Download number_of_intervals 586 bp_covered 4,688 output_type transcription factor binding sites all genome_build hg38 cell_type Skin biosample_type Tissue biosample_term_id UBERON:0002097 tissue_category Skin encode_experiment_id ENCSR928LDG biological_replicate 1 technical_replicate 1_1 antibody EP300 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 6,663 downloaded_date 07/10/2024 release_date 06/15/2017 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF741MWZ_CTGACKCA_sorted.bed.gz processed_file_md5 fe374a036c7ffe72f7f58cc89e737739 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF741MWZ_CTGACKCA_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF741MWZ_CTGACKCA_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF741MWZ_CTGACKCA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF741MWZ_CTGACKCA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 4c3426ef742a909b96980d700e404ac0 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens suprapubic skin tissue female adult (53 years);Original_cell_type=suprapubic skin;Lab=Richard Myers, HAIB;System=integumental system;ENCODE_BED_id=ENCFF741MWZ;ENCODE_bigBed_id=ENCFF262SZA;PMID=34755879;Motif_sequence=CTGACKCA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=UBERON:0036149;is_hg38_lifted=no system_category Integumentary life_stage Adult track_name Factorbook Skin (repl. 1) Motif finding EP300 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR928LDG] [Life stage: Adult] [TFBS]
EP300 • Tibial nerve NGFTBTSR523SSU • Factorbook34755879 Motif finding Tibial nerve TFBS Show metadata Download track Track metadata identifier NGFTBTSR523SSU data_source Factorbook Download track Download number_of_intervals 95,570 bp_covered 1,433,550 output_type transcription factor binding sites all genome_build hg38 cell_type Tibial nerve biosample_type Tissue biosample_term_id UBERON:0001323 tissue_category Nervous encode_experiment_id ENCSR580XUK biological_replicate 1 technical_replicate 1_1 antibody EP300 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 1,212,506 downloaded_date 07/10/2024 release_date 06/15/2017 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF474ZLP_GCCGCYGCCGCCGCC_sorted.bed.gz processed_file_md5 bd15e182d11aeb8abf4db5d3a879cd67 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF474ZLP_GCCGCYGCCGCCGCC_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF474ZLP_GCCGCYGCCGCCGCC_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF474ZLP_GCCGCYGCCGCCGCC.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF474ZLP_GCCGCYGCCGCCGCC.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 dda991cb733952edd940f128b96e443e data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens tibial nerve tissue male adult (37 years);Original_cell_type=tibial nerve;Lab=Richard Myers, HAIB;System=peripheral nervous system;ENCODE_BED_id=ENCFF474ZLP;ENCODE_bigBed_id=ENCFF346AYA;PMID=34755879;Motif_sequence=GCCGCYGCCGCCGCC;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=UBERON:0001323;is_hg38_lifted=no system_category Nervous life_stage Adult track_name Factorbook Tibial nerve (repl. 1) Motif finding EP300 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR580XUK] [Life stage: Adult] [TFBS]
EP300 • HepG2 NGFTBTVS4KQMOO • Factorbook34755879 Motif finding HepG2 TFBS Show metadata Download track Track metadata identifier NGFTBTVS4KQMOO data_source Factorbook Download track Download number_of_intervals 1,883 bp_covered 20,713 output_type transcription factor binding sites all genome_build hg38 cell_type HepG2 biosample_type Cell line biosample_term_id EFO:0001187 tissue_category Liver encode_experiment_id ENCSR000EDV biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EP300 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 27,698 downloaded_date 07/10/2024 release_date 10/29/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF488UHZ_BRTTRTGCAAY_sorted.bed.gz processed_file_md5 996d8336c6b89ab55a63d27b22f04629 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF488UHZ_BRTTRTGCAAY_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF488UHZ_BRTTRTGCAAY_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF488UHZ_BRTTRTGCAAY.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF488UHZ_BRTTRTGCAAY.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 0dc0f1b029f3928dde6966638cc58987 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens HepG2;Original_cell_type=HepG2;Lab=Michael Snyder, Stanford;System=exocrine system,endocrine system,digestive system;ENCODE_BED_id=ENCFF488UHZ;ENCODE_bigBed_id=ENCFF251RXO;PMID=34755879;Motif_sequence=BRTTRTGCAAY;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001187;is_hg38_lifted=no system_category Digestive life_stage Child track_name Factorbook HepG2 (repl. 1, 2) Motif finding EP300 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000EDV] [Life stage: Child] [TFBS]
EP300 • Lung NGFTBUFBCZB74P • Factorbook34755879 Motif finding Lung TFBS Show metadata Download track Track metadata identifier NGFTBUFBCZB74P data_source Factorbook Download track Download number_of_intervals 5,065 bp_covered 40,520 output_type transcription factor binding sites all genome_build hg38 cell_type Lung biosample_type Tissue biosample_term_id UBERON:0002048 tissue_category Lung encode_experiment_id ENCSR000MMZ biological_replicate 1 technical_replicate 1_1 antibody EP300 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 52,201 downloaded_date 07/10/2024 release_date 06/15/2017 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF833AES_VTGACTCA_sorted.bed.gz processed_file_md5 ded89504dd23c7cfe300ef5360d83f8f wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF833AES_VTGACTCA_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF833AES_VTGACTCA_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF833AES_VTGACTCA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF833AES_VTGACTCA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 e46489f1af33fdd291425320d0fca5bf data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens upper lobe of left lung tissue female adult (51 years);Original_cell_type=upper lobe of left lung;Lab=Richard Myers, HAIB;System=respiratory system;ENCODE_BED_id=ENCFF833AES;ENCODE_bigBed_id=ENCFF024QBJ;PMID=34755879;Motif_sequence=VTGACTCA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=UBERON:0008952;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name Factorbook Lung (repl. 1) Motif finding EP300 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000MMZ] [Life stage: Adult] [TFBS]
EP300 • H1-hESC NGFTBUJQOHSBBQ • Factorbook34755879 Motif finding H1-hESC TFBS Show metadata Download track Track metadata identifier NGFTBUJQOHSBBQ data_source Factorbook Download track Download number_of_intervals 649 bp_covered 18,821 output_type transcription factor binding sites significant genome_build hg38 cell_type H1-hESC biosample_type Cell line biosample_term_id EFO:0003042 tissue_category Embryo encode_experiment_id ENCSR000AUQ biological_replicate 1 technical_replicate 1_1 antibody EP300 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 11,018 downloaded_date 07/10/2024 release_date 08/06/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF583FUX_AAGCCTGRGGGYRCTGCAGGAGACCAGGG_filtered.bed.gz processed_file_md5 48462b848423af102da1de6cd7155351 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF583FUX_AAGCCTGRGGGYRCTGCAGGAGACCAGGG_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF583FUX_AAGCCTGRGGGYRCTGCAGGAGACCAGGG_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF583FUX_AAGCCTGRGGGYRCTGCAGGAGACCAGGG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF583FUX_AAGCCTGRGGGYRCTGCAGGAGACCAGGG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 38ff3c2300ddbb7ca260ad4d755c5f83 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens H1;Original_cell_type=H1;Lab=Bradley Bernstein, Broad;System=NR;ENCODE_BED_id=ENCFF583FUX;ENCODE_bigBed_id=ENCFF937OPV;PMID=34755879;Motif_sequence=AAGCCTGRGGGYRCTGCAGGAGACCAGGG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0003042;is_hg38_lifted=no system_category Embryo life_stage Unknown track_name Factorbook H1-hESC (repl. 1) Motif finding EP300 transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR000AUQ] [TFBS]
EP300 • A549 NGFTBUSCCLANSC • Factorbook34755879 Motif finding A549 TFBS Show metadata Download track Track metadata identifier NGFTBUSCCLANSC data_source Factorbook Download track Download number_of_intervals 1,100 bp_covered 16,500 output_type transcription factor binding sites all genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR770OTI biological_replicate 1, 2, 3 technical_replicate 1_1, 2_1, 3_1 antibody EP300 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 17,575 downloaded_date 07/10/2024 release_date 10/27/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF946TLM_YAAATATTTRYTGAR_sorted.bed.gz processed_file_md5 3c1e411b9e787028c1020557d8a260bd wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF946TLM_YAAATATTTRYTGAR_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF946TLM_YAAATATTTRYTGAR_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF946TLM_YAAATATTTRYTGAR.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF946TLM_YAAATATTTRYTGAR.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 73ae2574336d2b8ac8b71f9e7af230e6 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens A549 treated with 100 nM dexamethasone (agonist) for 2 hours;Original_cell_type=A549;Lab=Tim Reddy, Duke;System=respiratory system;ENCODE_BED_id=ENCFF946TLM;ENCODE_bigBed_id=ENCFF222ULN;PMID=34755879;Motif_sequence=YAAATATTTRYTGAR;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name Factorbook A549 (repl. 1, 2, 3) Motif finding EP300 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR770OTI] [Life stage: Adult] [TFBS]
EP300 • A549 NGFTBV5PKYLGXI • Factorbook34755879 Motif finding A549 TFBS Show metadata Download track Track metadata identifier NGFTBV5PKYLGXI data_source Factorbook Download track Download number_of_intervals 2,824 bp_covered 28,240 output_type transcription factor binding sites all genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR124VXG biological_replicate 1, 2, 3 technical_replicate 1_1, 2_1, 3_1 antibody EP300 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 33,575 downloaded_date 07/10/2024 release_date 10/27/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF758FGU_WHTRTTTRCW_sorted.bed.gz processed_file_md5 d05d2763b1cd6ed2b13abbfb8770ca61 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF758FGU_WHTRTTTRCW_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF758FGU_WHTRTTTRCW_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF758FGU_WHTRTTTRCW.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF758FGU_WHTRTTTRCW.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 faf1387d4011f17e7c1d9e66a768fd67 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens A549 treated with 100 nM dexamethasone (agonist) for 12 hours;Original_cell_type=A549;Lab=Tim Reddy, Duke;System=respiratory system;ENCODE_BED_id=ENCFF758FGU;ENCODE_bigBed_id=ENCFF415SPE;PMID=34755879;Motif_sequence=WHTRTTTRCW;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name Factorbook A549 (repl. 1, 2, 3) Motif finding EP300 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR124VXG] [Life stage: Adult] [TFBS]
EP300 • Tibial nerve NGFTBVC43NJWRG • Factorbook34755879 Motif finding Tibial nerve TFBS Show metadata Download track Track metadata identifier NGFTBVC43NJWRG data_source Factorbook Download track Download number_of_intervals 9,348 bp_covered 261,744 output_type transcription factor binding sites all genome_build hg38 cell_type Tibial nerve biosample_type Tissue biosample_term_id UBERON:0001323 tissue_category Nervous encode_experiment_id ENCSR569SZK biological_replicate 1 technical_replicate 1_1 antibody EP300 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 208,515 downloaded_date 07/10/2024 release_date 06/15/2017 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF052QED_RACTACAAYTCCCAKMAKGCYYCGCGGS_sorted.bed.gz processed_file_md5 2b9a05df093307ac36f2ca6b2538fdf6 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF052QED_RACTACAAYTCCCAKMAKGCYYCGCGGS_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF052QED_RACTACAAYTCCCAKMAKGCYYCGCGGS_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF052QED_RACTACAAYTCCCAKMAKGCYYCGCGGS.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF052QED_RACTACAAYTCCCAKMAKGCYYCGCGGS.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 2680424f68dc2dba81a855e5dbdbdf47 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens tibial nerve tissue female adult (51 years);Original_cell_type=tibial nerve;Lab=Richard Myers, HAIB;System=peripheral nervous system;ENCODE_BED_id=ENCFF052QED;ENCODE_bigBed_id=ENCFF952OPK;PMID=34755879;Motif_sequence=RACTACAAYTCCCAKMAKGCYYCGCGGS;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=UBERON:0001323;is_hg38_lifted=no system_category Nervous life_stage Adult track_name Factorbook Tibial nerve (repl. 1) Motif finding EP300 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR569SZK] [Life stage: Adult] [TFBS]
EP300 • K562 NGFTBVT5ITS2AS • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBVT5ITS2AS data_source Factorbook Download track Download number_of_intervals 7,974 bp_covered 135,558 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR000EGE biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EP300 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 139,098 downloaded_date 07/10/2024 release_date 05/14/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF702XPO_CTGKNNNNNNSWGATAA_sorted.bed.gz processed_file_md5 5128eb487841b1b5a436f59b728aa6b6 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF702XPO_CTGKNNNNNNSWGATAA_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF702XPO_CTGKNNNNNNSWGATAA_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF702XPO_CTGKNNNNNNSWGATAA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF702XPO_CTGKNNNNNNSWGATAA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 7a04ecd233ef1d8d9d9b716a08741b8e data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF702XPO;ENCODE_bigBed_id=ENCFF226VMS;PMID=34755879;Motif_sequence=CTGKNNNNNNSWGATAA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding EP300 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000EGE] [Life stage: Adult] [TFBS]
EP300 • Transverse colon NGFTBVWR56HVVN • Factorbook34755879 Motif finding Transverse colon TFBS Show metadata Download track Track metadata identifier NGFTBVWR56HVVN data_source Factorbook Download track Download number_of_intervals 362 bp_covered 2,534 output_type transcription factor binding sites all genome_build hg38 cell_type Transverse colon biosample_type Tissue biosample_term_id UBERON:0001157 tissue_category Digestive encode_experiment_id ENCSR429JTR biological_replicate 1 technical_replicate 1_1 antibody EP300 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 4,129 downloaded_date 07/10/2024 release_date 06/15/2017 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF754LGO_TGMGTCA_sorted.bed.gz processed_file_md5 bc64bc88826deaa3552d1b0dd7fa2884 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF754LGO_TGMGTCA_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF754LGO_TGMGTCA_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF754LGO_TGMGTCA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF754LGO_TGMGTCA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 43ff54885ae155e76041ee7db4216e42 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens transverse colon tissue male adult (37 years);Original_cell_type=transverse colon;Lab=Richard Myers, HAIB;System=digestive system;ENCODE_BED_id=ENCFF754LGO;ENCODE_bigBed_id=ENCFF258CAS;PMID=34755879;Motif_sequence=TGMGTCA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=UBERON:0001157;is_hg38_lifted=no system_category Digestive life_stage Adult track_name Factorbook Transverse colon (repl. 1) Motif finding EP300 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR429JTR] [Life stage: Adult] [TFBS]
EP300 • Ovary NGFTBWCORMDEQQ • Factorbook34755879 Motif finding Ovary TFBS Show metadata Download track Track metadata identifier NGFTBWCORMDEQQ data_source Factorbook Download track Download number_of_intervals 1,074 bp_covered 16,110 output_type transcription factor binding sites all genome_build hg38 cell_type Ovary biosample_type Tissue biosample_term_id NCIT:C12404 tissue_category Female Reproductive encode_experiment_id ENCSR696LQU biological_replicate 1 technical_replicate 1_1 antibody EP300 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 17,617 downloaded_date 07/10/2024 release_date 06/15/2017 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF917NDE_RGRACAGAATGTNCY_sorted.bed.gz processed_file_md5 570eb7f1af9e3da52db524d0bcbb39be wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF917NDE_RGRACAGAATGTNCY_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF917NDE_RGRACAGAATGTNCY_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF917NDE_RGRACAGAATGTNCY.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF917NDE_RGRACAGAATGTNCY.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 f9671e527aa49fdab67188c5f4fbf359 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens ovary tissue female adult (53 years);Original_cell_type=ovary;Lab=Richard Myers, HAIB;System=reproductive system;ENCODE_BED_id=ENCFF917NDE;ENCODE_bigBed_id=ENCFF767VVG;PMID=34755879;Motif_sequence=RGRACAGAATGTNCY;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=UBERON:0000992;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook Ovary (repl. 1) Motif finding EP300 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR696LQU] [Life stage: Adult] [TFBS]
EP300 • HepG2 NGFTBWFOOPJTWW • Factorbook34755879 Motif finding HepG2 TFBS Show metadata Download track Track metadata identifier NGFTBWFOOPJTWW data_source Factorbook Download track Download number_of_intervals 3,740 bp_covered 41,140 output_type transcription factor binding sites all genome_build hg38 cell_type HepG2 biosample_type Cell line biosample_term_id EFO:0001187 tissue_category Liver encode_experiment_id ENCSR000EDV biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EP300 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 53,459 downloaded_date 07/10/2024 release_date 10/29/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF488UHZ_MCYTTGMHCYY_sorted.bed.gz processed_file_md5 f6feab636018be7f04138c08464b87bf wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF488UHZ_MCYTTGMHCYY_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF488UHZ_MCYTTGMHCYY_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF488UHZ_MCYTTGMHCYY.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF488UHZ_MCYTTGMHCYY.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 7629770406c6e8112b7989362debd141 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens HepG2;Original_cell_type=HepG2;Lab=Michael Snyder, Stanford;System=exocrine system,endocrine system,digestive system;ENCODE_BED_id=ENCFF488UHZ;ENCODE_bigBed_id=ENCFF251RXO;PMID=34755879;Motif_sequence=MCYTTGMHCYY;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001187;is_hg38_lifted=no system_category Digestive life_stage Child track_name Factorbook HepG2 (repl. 1, 2) Motif finding EP300 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000EDV] [Life stage: Child] [TFBS]
EP300 • Gastroesophageal sphincter NGFTBWJ5NWWOO2 • Factorbook34755879 Motif finding Gastroesophageal sphincter TFBS Show metadata Download track Track metadata identifier NGFTBWJ5NWWOO2 data_source Factorbook Download track Download number_of_intervals 411 bp_covered 3,288 output_type transcription factor binding sites all genome_build hg38 cell_type Gastroesophageal sphincter biosample_type Tissue biosample_term_id UBERON:0004550 tissue_category Digestive encode_experiment_id ENCSR906OMM biological_replicate 1 technical_replicate 1_1 antibody EP300 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 4,731 downloaded_date 07/10/2024 release_date 06/15/2017 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF050WDS_STGACGYV_sorted.bed.gz processed_file_md5 dfa600d53abaa5b5a889eb7a97867928 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF050WDS_STGACGYV_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF050WDS_STGACGYV_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF050WDS_STGACGYV.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF050WDS_STGACGYV.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 a6664855a38e5023f0e0510c4fcdfb54 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens gastroesophageal sphincter tissue male adult (54 years);Original_cell_type=gastroesophageal sphincter;Lab=Richard Myers, HAIB;System=digestive system,musculature;ENCODE_BED_id=ENCFF050WDS;ENCODE_bigBed_id=ENCFF309DOR;PMID=34755879;Motif_sequence=STGACGYV;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=UBERON:0004550;is_hg38_lifted=no system_category Digestive life_stage Adult track_name Factorbook Gastroesophageal sphincter (repl. 1) Motif finding EP300 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR906OMM] [Life stage: Adult] [TFBS]
EP300 • A549 NGFTBWP45ZHG4A • Factorbook34755879 Motif finding A549 TFBS Show metadata Download track Track metadata identifier NGFTBWP45ZHG4A data_source Factorbook Download track Download number_of_intervals 2,301 bp_covered 18,408 output_type transcription factor binding sites all genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR260WCE biological_replicate 1, 2, 3 technical_replicate 1_1, 2_1, 3_1 antibody EP300 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 21,167 downloaded_date 07/10/2024 release_date 10/27/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF341BGN_VTGACTCA_sorted.bed.gz processed_file_md5 f10e874c5bf7695d84be12df0bec7421 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF341BGN_VTGACTCA_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF341BGN_VTGACTCA_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF341BGN_VTGACTCA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF341BGN_VTGACTCA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 64b7cb8acd29e258f0279d6ac12f15e8 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens A549 treated with 100 nM dexamethasone (agonist) for 0.5 hours;Original_cell_type=A549;Lab=Tim Reddy, Duke;System=respiratory system;ENCODE_BED_id=ENCFF341BGN;ENCODE_bigBed_id=ENCFF148CZM;PMID=34755879;Motif_sequence=VTGACTCA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name Factorbook A549 (repl. 1, 2, 3) Motif finding EP300 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR260WCE] [Life stage: Adult] [TFBS]
EP300 • A549 NGFTBX4O4GZTSX • Factorbook34755879 Motif finding A549 TFBS Show metadata Download track Track metadata identifier NGFTBX4O4GZTSX data_source Factorbook Download track Download number_of_intervals 3,774 bp_covered 41,514 output_type transcription factor binding sites all genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR047EVQ biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EP300 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 51,238 downloaded_date 07/10/2024 release_date 10/27/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF115NXR_DATTKCAYAAY_sorted.bed.gz processed_file_md5 450f73f4e2b382a27b5f80bd4eb7dbb6 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF115NXR_DATTKCAYAAY_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF115NXR_DATTKCAYAAY_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF115NXR_DATTKCAYAAY.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF115NXR_DATTKCAYAAY.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 0f098099f29a32044085b0b172bf12c4 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens A549 treated with 100 nM dexamethasone (agonist) for 3 hours;Original_cell_type=A549;Lab=Tim Reddy, Duke;System=respiratory system;ENCODE_BED_id=ENCFF115NXR;ENCODE_bigBed_id=ENCFF076BDU;PMID=34755879;Motif_sequence=DATTKCAYAAY;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name Factorbook A549 (repl. 1, 2) Motif finding EP300 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR047EVQ] [Life stage: Adult] [TFBS]
EP300 • SK-N-SH NGFTBXBFF32W5F • Factorbook34755879 Motif finding SK-N-SH TFBS Show metadata Download track Track metadata identifier NGFTBXBFF32W5F data_source Factorbook Download track Download number_of_intervals 21,798 bp_covered 217,980 output_type transcription factor binding sites all genome_build hg38 cell_type SK-N-SH biosample_type Cell line biosample_term_id EFO:0003072 tissue_category Brain encode_experiment_id ENCSR000BUA biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EP300 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 259,760 downloaded_date 07/10/2024 release_date 09/10/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF854RMQ_RRTGACTCAB_sorted.bed.gz processed_file_md5 d314fe47798ef947add728e2049543f0 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF854RMQ_RRTGACTCAB_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF854RMQ_RRTGACTCAB_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF854RMQ_RRTGACTCAB.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF854RMQ_RRTGACTCAB.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 07c682879c916f2c09c0d3adda781de7 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens SK-N-SH;Original_cell_type=SK-N-SH;Lab=Richard Myers, HAIB;System=central nervous system;ENCODE_BED_id=ENCFF854RMQ;ENCODE_bigBed_id=ENCFF451CNG;PMID=34755879;Motif_sequence=RRTGACTCAB;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0003072;is_hg38_lifted=no system_category Nervous life_stage Child track_name Factorbook SK-N-SH (repl. 1, 2) Motif finding EP300 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BUA] [Life stage: Child] [TFBS]
EP300 • A549 NGFTBXJ6MZP23S • Factorbook34755879 Motif finding A549 TFBS Show metadata Download track Track metadata identifier NGFTBXJ6MZP23S data_source Factorbook Download track Download number_of_intervals 3,664 bp_covered 29,312 output_type transcription factor binding sites all genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR610RKF biological_replicate 1, 2, 3 technical_replicate 1_1, 2_1, 3_1 antibody EP300 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 34,838 downloaded_date 07/10/2024 release_date 10/27/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF176DIO_RCATTCCW_sorted.bed.gz processed_file_md5 0e1be45788a1a85da25212733c373f13 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF176DIO_RCATTCCW_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF176DIO_RCATTCCW_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF176DIO_RCATTCCW.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF176DIO_RCATTCCW.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 92bc2946cf7588bc3ea89988d9e74518 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens A549 treated with 100 nM dexamethasone (agonist) for 5 hours;Original_cell_type=A549;Lab=Tim Reddy, Duke;System=respiratory system;ENCODE_BED_id=ENCFF176DIO;ENCODE_bigBed_id=ENCFF987JCN;PMID=34755879;Motif_sequence=RCATTCCW;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name Factorbook A549 (repl. 1, 2, 3) Motif finding EP300 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR610RKF] [Life stage: Adult] [TFBS]