EP300 • A549 NGFTBXQZACCFYB • Factorbook34755879 Motif finding A549 TFBS Show metadata Download track Track metadata identifier NGFTBXQZACCFYB data_source Factorbook Download track Download number_of_intervals 18,639 bp_covered 149,112 output_type transcription factor binding sites all genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR602BTS biological_replicate 1, 2, 3 technical_replicate 1_1, 2_1, 3_1 antibody EP300 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 159,107 downloaded_date 07/10/2024 release_date 10/19/2017 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF250DXN_VTGACTCA_sorted.bed.gz processed_file_md5 bf1551c7f667472217743798ab4cf5f5 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF250DXN_VTGACTCA_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF250DXN_VTGACTCA_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF250DXN_VTGACTCA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF250DXN_VTGACTCA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 41fadc69347c35b23aed9ab0636ceda4 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens A549 treated with 100 nM dexamethasone (agonist) for 5 minutes;Original_cell_type=A549;Lab=Tim Reddy, Duke;System=respiratory system;ENCODE_BED_id=ENCFF250DXN;ENCODE_bigBed_id=ENCFF266AVR;PMID=34755879;Motif_sequence=VTGACTCA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name Factorbook A549 (repl. 1, 2, 3) Motif finding EP300 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR602BTS] [Life stage: Adult] [TFBS]
EP300 • K562 NGFTBXUU54WGA4 • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBXUU54WGA4 data_source Factorbook Download track Download number_of_intervals 1,815 bp_covered 36,300 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR000EGY biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EP300 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 37,601 downloaded_date 07/10/2024 release_date 10/29/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF821MKR_BBCTTATCWSNNNNNNMCAG_sorted.bed.gz processed_file_md5 bf1f6d0388551659e78f370f0e44fc3b wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF821MKR_BBCTTATCWSNNNNNNMCAG_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF821MKR_BBCTTATCWSNNNNNNMCAG_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF821MKR_BBCTTATCWSNNNNNNMCAG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF821MKR_BBCTTATCWSNNNNNNMCAG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 8581fd13bc8db3ff63b4eea8883e4575 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF821MKR;ENCODE_bigBed_id=ENCFF696URH;PMID=34755879;Motif_sequence=BBCTTATCWSNNNNNNMCAG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding EP300 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000EGY] [Life stage: Adult] [TFBS]
EP300 • SK-N-SH NGFTBXW2T4NEFR • Factorbook34755879 Motif finding SK-N-SH TFBS Show metadata Download track Track metadata identifier NGFTBXW2T4NEFR data_source Factorbook Download track Download number_of_intervals 6,509 bp_covered 52,072 output_type transcription factor binding sites all genome_build hg38 cell_type SK-N-SH biosample_type Cell line biosample_term_id EFO:0003072 tissue_category Brain encode_experiment_id ENCSR000BUA biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EP300 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 65,928 downloaded_date 07/10/2024 release_date 09/10/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF854RMQ_WGGAATKY_sorted.bed.gz processed_file_md5 fc748d077fd964015a47b183840ce9ed wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF854RMQ_WGGAATKY_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF854RMQ_WGGAATKY_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF854RMQ_WGGAATKY.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF854RMQ_WGGAATKY.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 ff15177378f06c8f0b68087563ad7d27 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens SK-N-SH;Original_cell_type=SK-N-SH;Lab=Richard Myers, HAIB;System=central nervous system;ENCODE_BED_id=ENCFF854RMQ;ENCODE_bigBed_id=ENCFF451CNG;PMID=34755879;Motif_sequence=WGGAATKY;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0003072;is_hg38_lifted=no system_category Nervous life_stage Child track_name Factorbook SK-N-SH (repl. 1, 2) Motif finding EP300 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BUA] [Life stage: Child] [TFBS]
EP300 • GM12878 NGFTBYHNQTT4UX • Factorbook34755879 Motif finding GM12878 TFBS Show metadata Download track Track metadata identifier NGFTBYHNQTT4UX data_source Factorbook Download track Download number_of_intervals 5,504 bp_covered 60,544 output_type transcription factor binding sites all genome_build hg38 cell_type GM12878 biosample_type Cell line biosample_term_id EFO:0002784 tissue_category Blood encode_experiment_id ENCSR000DZD biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EP300 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 75,624 downloaded_date 07/10/2024 release_date 05/14/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF718TWQ_RGGGAVTTTCH_sorted.bed.gz processed_file_md5 3f12ca9103f97906d73adcca9320f077 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF718TWQ_RGGGAVTTTCH_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF718TWQ_RGGGAVTTTCH_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF718TWQ_RGGGAVTTTCH.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF718TWQ_RGGGAVTTTCH.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 53efb271bae0e794f2f376064e744561 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens GM12878;Original_cell_type=GM12878;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF718TWQ;ENCODE_bigBed_id=ENCFF242HCG;PMID=34755879;Motif_sequence=RGGGAVTTTCH;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002784;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name Factorbook GM12878 (repl. 1, 2) Motif finding EP300 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000DZD] [TFBS]
EP300 • A549 NGFTBYKQI5NL6W • Factorbook34755879 Motif finding A549 TFBS Show metadata Download track Track metadata identifier NGFTBYKQI5NL6W data_source Factorbook Download track Download number_of_intervals 2,824 bp_covered 22,592 output_type transcription factor binding sites all genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR886OEO biological_replicate 2, 3 technical_replicate 2_1, 3_1 antibody EP300 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 27,585 downloaded_date 07/10/2024 release_date 10/19/2017 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF678QTH_TGAKGWMA_sorted.bed.gz processed_file_md5 b1c9561b688df16c1fb4b87004e6963b wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF678QTH_TGAKGWMA_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF678QTH_TGAKGWMA_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF678QTH_TGAKGWMA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF678QTH_TGAKGWMA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 d2fbbb608b82809fcd9d038fd0e0d5ee data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens A549;Original_cell_type=A549;Lab=Tim Reddy, Duke;System=respiratory system;ENCODE_BED_id=ENCFF678QTH;ENCODE_bigBed_id=ENCFF960ZEI;PMID=34755879;Motif_sequence=TGAKGWMA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name Factorbook A549 (repl. 2, 3) Motif finding EP300 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR886OEO] [Life stage: Adult] [TFBS]
EP300 • Stomach NGFTBYM4Y2IUWV • Factorbook34755879 Motif finding Stomach TFBS Show metadata Download track Track metadata identifier NGFTBYM4Y2IUWV data_source Factorbook Download track Download number_of_intervals 913 bp_covered 7,304 output_type transcription factor binding sites all genome_build hg38 cell_type Stomach biosample_type Tissue biosample_term_id UBERON:0000945 tissue_category Digestive encode_experiment_id ENCSR684NJD biological_replicate 1 technical_replicate 1_1 antibody EP300 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 10,210 downloaded_date 07/10/2024 release_date 06/15/2017 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF099PQM_STGMGTCA_sorted.bed.gz processed_file_md5 77e98f6e8a2b3394c1fbd43cc5b53c4e wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF099PQM_STGMGTCA_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF099PQM_STGMGTCA_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF099PQM_STGMGTCA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF099PQM_STGMGTCA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 2be6d3074b856720b7ddd1196cc32ee1 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens stomach tissue male adult (54 years);Original_cell_type=stomach;Lab=Richard Myers, HAIB;System=digestive system;ENCODE_BED_id=ENCFF099PQM;ENCODE_bigBed_id=ENCFF818VAB;PMID=34755879;Motif_sequence=STGMGTCA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=UBERON:0000945;is_hg38_lifted=no system_category Digestive life_stage Adult track_name Factorbook Stomach (repl. 1) Motif finding EP300 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR684NJD] [Life stage: Adult] [TFBS]
EP300 • Sigmoid colon NGFTBYSLC5CFAS • Factorbook34755879 Motif finding Sigmoid colon TFBS Show metadata Download track Track metadata identifier NGFTBYSLC5CFAS data_source Factorbook Download track Download number_of_intervals 2,996 bp_covered 47,936 output_type transcription factor binding sites all genome_build hg38 cell_type Sigmoid colon biosample_type Tissue biosample_term_id UBERON:0001159 tissue_category Digestive encode_experiment_id ENCSR244ZAO biological_replicate 1 technical_replicate 1_1 antibody EP300 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 52,201 downloaded_date 07/10/2024 release_date 06/15/2017 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF992RST_RGNACATDSTGTTCYC_sorted.bed.gz processed_file_md5 f862819b99eb05ababf28a926d39ce98 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF992RST_RGNACATDSTGTTCYC_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF992RST_RGNACATDSTGTTCYC_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF992RST_RGNACATDSTGTTCYC.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF992RST_RGNACATDSTGTTCYC.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 d8dc164d8e635943ac556bc7084d5202 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens sigmoid colon tissue female adult (51 years);Original_cell_type=sigmoid colon;Lab=Richard Myers, HAIB;System=digestive system;ENCODE_BED_id=ENCFF992RST;ENCODE_bigBed_id=ENCFF953ZIP;PMID=34755879;Motif_sequence=RGNACATDSTGTTCYC;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=UBERON:0001159;is_hg38_lifted=no system_category Digestive life_stage Adult track_name Factorbook Sigmoid colon (repl. 1) Motif finding EP300 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR244ZAO] [Life stage: Adult] [TFBS]
EP300 • A549 NGFTBYSQUFFM3P • Factorbook34755879 Motif finding A549 TFBS Show metadata Download track Track metadata identifier NGFTBYSQUFFM3P data_source Factorbook Download track Download number_of_intervals 14,523 bp_covered 217,845 output_type transcription factor binding sites all genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR602BTS biological_replicate 1, 2, 3 technical_replicate 1_1, 2_1, 3_1 antibody EP300 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 210,489 downloaded_date 07/10/2024 release_date 10/19/2017 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF250DXN_CWAARCAAACARWRM_sorted.bed.gz processed_file_md5 9fba44298cecdc3bd45a93074338a00e wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF250DXN_CWAARCAAACARWRM_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF250DXN_CWAARCAAACARWRM_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF250DXN_CWAARCAAACARWRM.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF250DXN_CWAARCAAACARWRM.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 1cc5e61909f99c6464291a51af356faa data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens A549 treated with 100 nM dexamethasone (agonist) for 5 minutes;Original_cell_type=A549;Lab=Tim Reddy, Duke;System=respiratory system;ENCODE_BED_id=ENCFF250DXN;ENCODE_bigBed_id=ENCFF266AVR;PMID=34755879;Motif_sequence=CWAARCAAACARWRM;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name Factorbook A549 (repl. 1, 2, 3) Motif finding EP300 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR602BTS] [Life stage: Adult] [TFBS]
EP300 • H1-hESC NGFTBYVE7VF5N3 • Factorbook34755879 Motif finding H1-hESC TFBS Show metadata Download track Track metadata identifier NGFTBYVE7VF5N3 data_source Factorbook Download track Download number_of_intervals 757 bp_covered 11,355 output_type transcription factor binding sites all genome_build hg38 cell_type H1-hESC biosample_type Cell line biosample_term_id EFO:0003042 tissue_category Embryo encode_experiment_id ENCSR000AUQ biological_replicate 1 technical_replicate 1_1 antibody EP300 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 11,316 downloaded_date 07/10/2024 release_date 08/06/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF583FUX_DTATTTCATCCCTTA_sorted.bed.gz processed_file_md5 40bee57861d0b340126aa0d210075ac9 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF583FUX_DTATTTCATCCCTTA_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF583FUX_DTATTTCATCCCTTA_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF583FUX_DTATTTCATCCCTTA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF583FUX_DTATTTCATCCCTTA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 9484e6bdc4a891780a50a67b86e348de data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens H1;Original_cell_type=H1;Lab=Bradley Bernstein, Broad;System=NR;ENCODE_BED_id=ENCFF583FUX;ENCODE_bigBed_id=ENCFF937OPV;PMID=34755879;Motif_sequence=DTATTTCATCCCTTA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0003042;is_hg38_lifted=no system_category Embryo life_stage Unknown track_name Factorbook H1-hESC (repl. 1) Motif finding EP300 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000AUQ] [TFBS]
EP300 • Sigmoid colon NGFTBYWZEHZAXB • Factorbook34755879 Motif finding Sigmoid colon TFBS Show metadata Download track Track metadata identifier NGFTBYWZEHZAXB data_source Factorbook Download track Download number_of_intervals 4,943 bp_covered 74,145 output_type transcription factor binding sites all genome_build hg38 cell_type Sigmoid colon biosample_type Tissue biosample_term_id UBERON:0001159 tissue_category Digestive encode_experiment_id ENCSR906UPC biological_replicate 1 technical_replicate 1_1 antibody EP300 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 79,732 downloaded_date 07/10/2024 release_date 06/15/2017 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF740VFC_RGAACASAATGTYCY_sorted.bed.gz processed_file_md5 19e047cfa9e3a39cb9e071f419bc5fbf wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF740VFC_RGAACASAATGTYCY_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF740VFC_RGAACASAATGTYCY_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF740VFC_RGAACASAATGTYCY.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF740VFC_RGAACASAATGTYCY.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 4ba48bd52f9fdae421c2d4a173bfec66 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens sigmoid colon tissue male adult (37 years);Original_cell_type=sigmoid colon;Lab=Richard Myers, HAIB;System=digestive system;ENCODE_BED_id=ENCFF740VFC;ENCODE_bigBed_id=ENCFF524QSR;PMID=34755879;Motif_sequence=RGAACASAATGTYCY;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=UBERON:0001159;is_hg38_lifted=no system_category Digestive life_stage Adult track_name Factorbook Sigmoid colon (repl. 1) Motif finding EP300 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR906UPC] [Life stage: Adult] [TFBS]
EP300 • A549 NGFTBYZ7MJBGMY • Factorbook34755879 Motif finding A549 TFBS Show metadata Download track Track metadata identifier NGFTBYZ7MJBGMY data_source Factorbook Download track Download number_of_intervals 5,380 bp_covered 59,180 output_type transcription factor binding sites all genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR886OEO biological_replicate 2, 3 technical_replicate 2_1, 3_1 antibody EP300 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 65,818 downloaded_date 07/10/2024 release_date 10/19/2017 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF678QTH_WAARCAAAYAD_sorted.bed.gz processed_file_md5 c6563b81d458a7eac68aa47dab83fe66 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF678QTH_WAARCAAAYAD_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF678QTH_WAARCAAAYAD_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF678QTH_WAARCAAAYAD.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF678QTH_WAARCAAAYAD.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 a30d93ba48010bd3ae43f493f29e2b87 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens A549;Original_cell_type=A549;Lab=Tim Reddy, Duke;System=respiratory system;ENCODE_BED_id=ENCFF678QTH;ENCODE_bigBed_id=ENCFF960ZEI;PMID=34755879;Motif_sequence=WAARCAAAYAD;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name Factorbook A549 (repl. 2, 3) Motif finding EP300 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR886OEO] [Life stage: Adult] [TFBS]
EP300 • Sigmoid colon NGFTBZ46LDUGU7 • Factorbook34755879 Motif finding Sigmoid colon TFBS Show metadata Download track Track metadata identifier NGFTBZ46LDUGU7 data_source Factorbook Download track Download number_of_intervals 1,991 bp_covered 21,901 output_type transcription factor binding sites all genome_build hg38 cell_type Sigmoid colon biosample_type Tissue biosample_term_id UBERON:0001159 tissue_category Digestive encode_experiment_id ENCSR906UPC biological_replicate 1 technical_replicate 1_1 antibody EP300 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 28,257 downloaded_date 07/10/2024 release_date 06/15/2017 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF740VFC_STGCGTCABBG_sorted.bed.gz processed_file_md5 8d11af0d01444415c665d0810f37826e wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF740VFC_STGCGTCABBG_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF740VFC_STGCGTCABBG_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF740VFC_STGCGTCABBG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF740VFC_STGCGTCABBG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 9fa7749482c504ea7f717fdba12a9074 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens sigmoid colon tissue male adult (37 years);Original_cell_type=sigmoid colon;Lab=Richard Myers, HAIB;System=digestive system;ENCODE_BED_id=ENCFF740VFC;ENCODE_bigBed_id=ENCFF524QSR;PMID=34755879;Motif_sequence=STGCGTCABBG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=UBERON:0001159;is_hg38_lifted=no system_category Digestive life_stage Adult track_name Factorbook Sigmoid colon (repl. 1) Motif finding EP300 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR906UPC] [Life stage: Adult] [TFBS]
EP300 • K562 NGFTBZ5OGAFMNI • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBZ5OGAFMNI data_source Factorbook Download track Download number_of_intervals 8,133 bp_covered 65,064 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR000EGE biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EP300 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 83,005 downloaded_date 07/10/2024 release_date 05/14/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF702XPO_CTTATCTK_sorted.bed.gz processed_file_md5 d9b6b7616fb3e6a66628333927f26c66 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF702XPO_CTTATCTK_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF702XPO_CTTATCTK_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF702XPO_CTTATCTK.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF702XPO_CTTATCTK.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 cbdc7771d2bc99a59b6321ccfce00482 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF702XPO;ENCODE_bigBed_id=ENCFF226VMS;PMID=34755879;Motif_sequence=CTTATCTK;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding EP300 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000EGE] [Life stage: Adult] [TFBS]
EP300 • Tibial nerve NGFTBZBPVR5XHF • Factorbook34755879 Motif finding Tibial nerve TFBS Show metadata Download track Track metadata identifier NGFTBZBPVR5XHF data_source Factorbook Download track Download number_of_intervals 13,025 bp_covered 195,375 output_type transcription factor binding sites all genome_build hg38 cell_type Tibial nerve biosample_type Tissue biosample_term_id UBERON:0001323 tissue_category Nervous encode_experiment_id ENCSR580XUK biological_replicate 1 technical_replicate 1_1 antibody EP300 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 186,849 downloaded_date 07/10/2024 release_date 06/15/2017 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF474ZLP_RGAACAGRATGTHCY_sorted.bed.gz processed_file_md5 61b62824b6ff5bac9788316325b6e44c wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF474ZLP_RGAACAGRATGTHCY_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF474ZLP_RGAACAGRATGTHCY_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF474ZLP_RGAACAGRATGTHCY.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF474ZLP_RGAACAGRATGTHCY.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 36e56010f53d1bd7bb793e7e51353c57 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens tibial nerve tissue male adult (37 years);Original_cell_type=tibial nerve;Lab=Richard Myers, HAIB;System=peripheral nervous system;ENCODE_BED_id=ENCFF474ZLP;ENCODE_bigBed_id=ENCFF346AYA;PMID=34755879;Motif_sequence=RGAACAGRATGTHCY;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=UBERON:0001323;is_hg38_lifted=no system_category Nervous life_stage Adult track_name Factorbook Tibial nerve (repl. 1) Motif finding EP300 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR580XUK] [Life stage: Adult] [TFBS]
EP300 • Ishikawa NGFTBZGRW5S3GO • Factorbook34755879 Motif finding Ishikawa TFBS Show metadata Download track Track metadata identifier NGFTBZGRW5S3GO data_source Factorbook Download track Download number_of_intervals 6,125 bp_covered 49,000 output_type transcription factor binding sites all genome_build hg38 cell_type Ishikawa biosample_type Cell line biosample_term_id EFO:0005718 tissue_category Female Reproductive encode_experiment_id ENCSR000BUE biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EP300 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 58,996 downloaded_date 07/10/2024 release_date 09/10/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF191GQE_TGAGTCAY_sorted.bed.gz processed_file_md5 eb3256fd441191d28e0d69a064bd5e81 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF191GQE_TGAGTCAY_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF191GQE_TGAGTCAY_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF191GQE_TGAGTCAY.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF191GQE_TGAGTCAY.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 cb9ece87a5149380b00b5e6fa670d974 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens Ishikawa;Original_cell_type=Ishikawa;Lab=Richard Myers, HAIB;System=reproductive system;ENCODE_BED_id=ENCFF191GQE;ENCODE_bigBed_id=ENCFF364ZWT;PMID=34755879;Motif_sequence=TGAGTCAY;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0005718;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook Ishikawa (repl. 1, 2) Motif finding EP300 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BUE] [Life stage: Adult] [TFBS]
EP300 • HepG2 NGFTBZIFSHYVPD • Factorbook34755879 Motif finding HepG2 TFBS Show metadata Download track Track metadata identifier NGFTBZIFSHYVPD data_source Factorbook Download track Download number_of_intervals 2,643 bp_covered 29,073 output_type transcription factor binding sites all genome_build hg38 cell_type HepG2 biosample_type Cell line biosample_term_id EFO:0001187 tissue_category Liver encode_experiment_id ENCSR000EDV biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EP300 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 36,459 downloaded_date 07/10/2024 release_date 10/29/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF488UHZ_YWRWGYAAACA_sorted.bed.gz processed_file_md5 ed70b5bca06f07a885a95245ad3660d6 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF488UHZ_YWRWGYAAACA_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF488UHZ_YWRWGYAAACA_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF488UHZ_YWRWGYAAACA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF488UHZ_YWRWGYAAACA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 9e7b82b5f1eb5a6a78750785a2dfa062 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens HepG2;Original_cell_type=HepG2;Lab=Michael Snyder, Stanford;System=exocrine system,endocrine system,digestive system;ENCODE_BED_id=ENCFF488UHZ;ENCODE_bigBed_id=ENCFF251RXO;PMID=34755879;Motif_sequence=YWRWGYAAACA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001187;is_hg38_lifted=no system_category Digestive life_stage Child track_name Factorbook HepG2 (repl. 1, 2) Motif finding EP300 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000EDV] [Life stage: Child] [TFBS]
EP300 • A549 NGFTBZPY5ROEXZ • Factorbook34755879 Motif finding A549 TFBS Show metadata Download track Track metadata identifier NGFTBZPY5ROEXZ data_source Factorbook Download track Download number_of_intervals 6,988 bp_covered 55,904 output_type transcription factor binding sites all genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR841ASB biological_replicate 1, 2, 3 technical_replicate 1_1, 2_1, 3_1 antibody EP300 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 64,394 downloaded_date 07/10/2024 release_date 10/27/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF460YQS_RTGACTCA_sorted.bed.gz processed_file_md5 6380bf4acfc06264dabf4bd0af7180c4 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF460YQS_RTGACTCA_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF460YQS_RTGACTCA_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF460YQS_RTGACTCA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF460YQS_RTGACTCA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 e4a3b5a7742e4c0ed485fda124187d9c data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens A549 treated with 100 nM dexamethasone (agonist) for 6 hours;Original_cell_type=A549;Lab=Tim Reddy, Duke;System=respiratory system;ENCODE_BED_id=ENCFF460YQS;ENCODE_bigBed_id=ENCFF748EFU;PMID=34755879;Motif_sequence=RTGACTCA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name Factorbook A549 (repl. 1, 2, 3) Motif finding EP300 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR841ASB] [Life stage: Adult] [TFBS]
EP300 • A549 NGFTBZRIHNIUOR • Factorbook34755879 Motif finding A549 TFBS Show metadata Download track Track metadata identifier NGFTBZRIHNIUOR data_source Factorbook Download track Download number_of_intervals 2,814 bp_covered 30,954 output_type transcription factor binding sites all genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR358ELZ biological_replicate 1, 3 technical_replicate 1_1, 3_1 antibody EP300 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 36,815 downloaded_date 07/10/2024 release_date 10/27/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF839FGF_CASWNTGTWCH_sorted.bed.gz processed_file_md5 14af949fd3ade425e7a3c6f59fbc27b9 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF839FGF_CASWNTGTWCH_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF839FGF_CASWNTGTWCH_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF839FGF_CASWNTGTWCH.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF839FGF_CASWNTGTWCH.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 36a888074cea51204ac0d0c24f6309fe data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens A549 treated with 100 nM dexamethasone (agonist) for 1 hour;Original_cell_type=A549;Lab=Tim Reddy, Duke;System=respiratory system;ENCODE_BED_id=ENCFF839FGF;ENCODE_bigBed_id=ENCFF860GWB;PMID=34755879;Motif_sequence=CASWNTGTWCH;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name Factorbook A549 (repl. 1, 3) Motif finding EP300 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR358ELZ] [Life stage: Adult] [TFBS]
EP300 • A549 NGFTBZRQDF55OM • Factorbook34755879 Motif finding A549 TFBS Show metadata Download track Track metadata identifier NGFTBZRQDF55OM data_source Factorbook Download track Download number_of_intervals 8,172 bp_covered 89,892 output_type transcription factor binding sites all genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR044IFH biological_replicate 1, 2, 3 technical_replicate 1_1, 2_1, 3_1 antibody EP300 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 102,107 downloaded_date 07/10/2024 release_date 10/19/2017 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF437MOR_WVAGCAAACAD_sorted.bed.gz processed_file_md5 66b11eb623558430f379f42ce6bd6cd0 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF437MOR_WVAGCAAACAD_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF437MOR_WVAGCAAACAD_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF437MOR_WVAGCAAACAD.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF437MOR_WVAGCAAACAD.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 f4afe11148f7019bf08793ca150a051b data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens A549 treated with 100 nM dexamethasone (agonist) for 25 minutes;Original_cell_type=A549;Lab=Tim Reddy, Duke;System=respiratory system;ENCODE_BED_id=ENCFF437MOR;ENCODE_bigBed_id=ENCFF642COK;PMID=34755879;Motif_sequence=WVAGCAAACAD;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name Factorbook A549 (repl. 1, 2, 3) Motif finding EP300 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR044IFH] [Life stage: Adult] [TFBS]
EP300 • Ishikawa NGFTBZT3BDTYN4 • Factorbook34755879 Motif finding Ishikawa TFBS Show metadata Download track Track metadata identifier NGFTBZT3BDTYN4 data_source Factorbook Download track Download number_of_intervals 1 bp_covered 20 output_type transcription factor binding sites significant genome_build hg38 cell_type Ishikawa biosample_type Cell line biosample_term_id EFO:0005718 tissue_category Female Reproductive encode_experiment_id ENCSR000BUE biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EP300 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 354 downloaded_date 07/10/2024 release_date 09/10/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF191GQE_GGVRGGSAGGSAGGGMAGGB_filtered.bed.gz processed_file_md5 3367b245b6cfff957904581cd7433870 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF191GQE_GGVRGGSAGGSAGGGMAGGB_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF191GQE_GGVRGGSAGGSAGGGMAGGB_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF191GQE_GGVRGGSAGGSAGGGMAGGB.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF191GQE_GGVRGGSAGGSAGGGMAGGB.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 de419c80284657ae33768b6d8f4470f3 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens Ishikawa;Original_cell_type=Ishikawa;Lab=Richard Myers, HAIB;System=reproductive system;ENCODE_BED_id=ENCFF191GQE;ENCODE_bigBed_id=ENCFF364ZWT;PMID=34755879;Motif_sequence=GGVRGGSAGGSAGGGMAGGB;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0005718;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook Ishikawa (repl. 1, 2) Motif finding EP300 transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR000BUE] [Life stage: Adult] [TFBS]