ESR1 • T47D NGENCRQOOB77XD • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq T47D TF Show metadata Download track Track metadata identifier NGENCRQOOB77XD data_source ENCODE Download track Download number_of_intervals 3,435 bp_covered 833,377 output_type IDR thresholded peaks genome_build hg38 cell_type T47D biosample_type Cell line biosample_term_id EFO:0001247 tissue_category Breast encode_experiment_id ENCSR000BQD biological_replicate 2 technical_replicate 2_1 antibody ESR1 assay TF ChIP-seq file_format bed narrowPeak file_size 65,917 downloaded_date 07/10/2025 release_date 01/06/2021 date_added_to_filer 07/30/2025 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF528YOY.bed.gz processed_file_md5 6c6c2504c5a07b20870686ede036db9b wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF528YOY.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF528YOY.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF528YOY/@@download/ENCFF528YOY.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF528YOY.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 04448a71fe17a9b5d29106dae17c0549 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens T47D treated with 100 nM bisphenol A for 30 minutes;Lab=Richard Myers, HAIB;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=adult 54 years;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH002299,FactorBook:ENCSR000BQD,GEO:GSM1010823;Project=ENCODE;Award=U54HG004576;Experiment_date_released=2012-02-29,2011-07-18;Submitted_track_name=rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=T47D;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_system_slims=integumental system,exocrine system;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001247;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name ENCODE T47D (repl. 2) TF ChIP-seq ESR1 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000BQD] [Life stage: Adult] [TF ChIP-seq peaks]
ESR1 • Ishikawa NGENCS3NAL4MJ5 • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq Ishikawa TF Show metadata Download track Track metadata identifier NGENCS3NAL4MJ5 data_source ENCODE Download track Download number_of_intervals 4,855 bp_covered 1,138,481 output_type IDR thresholded peaks genome_build hg38 cell_type Ishikawa biosample_type Cell line biosample_term_id EFO:0005718 tissue_category Female Reproductive encode_experiment_id ENCSR000BQR biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ESR1 assay TF ChIP-seq file_format bed narrowPeak file_size 93,319 downloaded_date 09/10/2024 release_date 02/04/2021 date_added_to_filer 10/01/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF201BHI.bed.gz processed_file_md5 4266f8b9ca5f634a8436849e8d0af35b wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF201BHI.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF201BHI.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF201BHI/@@download/ENCFF201BHI.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF201BHI.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 a5ccd0a39447b311d76c919969e00d59 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens Ishikawa treated with 100 nM bisphenol A for 1 hour;Lab=Richard Myers, HAIB;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=adult 39 years;Reference=PMID:22710073;External_resources=UCSC-ENCODE-hg19:wgEncodeEH002313,FactorBook:ENCSR000BQR,GEO:GSM1010747;Project=ENCODE;Award=U54HG004576;Experiment_date_released=2012-02-29,2011-07-18;Submitted_track_name=pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=Ishikawa;ENCODE_cell_slims=cancer cell;ENCODE_system_slims=reproductive system;ENCODE_biosample_term_synonyms=Ishikawa cell;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0005718;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name ENCODE Ishikawa (repl. 1, 2) TF ChIP-seq ESR1 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000BQR] [Life stage: Adult] [TF ChIP-seq peaks]
ESR1 • T47D NGENCTFNGWGH6S • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq T47D TF Show metadata Download track Track metadata identifier NGENCTFNGWGH6S data_source ENCODE Download track Download number_of_intervals 9,378 bp_covered 2,446,488 output_type conservative IDR thresholded peaks genome_build hg38 cell_type T47D biosample_type Cell line biosample_term_id EFO:0001247 tissue_category Breast encode_experiment_id ENCSR000BJS biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ESR1 assay TF ChIP-seq file_format bed narrowPeak file_size 180,303 downloaded_date 07/10/2025 release_date 12/26/2020 date_added_to_filer 07/30/2025 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF128RPX.bed.gz processed_file_md5 f5fbf213fcfe47f4607fd6e577117516 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF128RPX.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF128RPX.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF128RPX/@@download/ENCFF128RPX.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF128RPX.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 e179f8e71e928433a70471229ba79850 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq conservative IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens T47D treated with 100 nM genistein for 1 hour;Lab=Richard Myers, HAIB;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=adult 54 years;Reference=NR;External_resources=GEO:GSM803374,UCSC-ENCODE-hg19:wgEncodeEH001556,FactorBook:ENCSR000BJS;Project=ENCODE;Award=U54HG004576;Experiment_date_released=2011-07-18;Submitted_track_name=rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=T47D;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_system_slims=integumental system,exocrine system;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001247;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name ENCODE T47D (repl. 1, 2) TF ChIP-seq ESR1 conservative IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000BJS] [Life stage: Adult] [TF ChIP-seq peaks]
ESR1 • Ishikawa NGENCTO6VY5N2O • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq Ishikawa TF Show metadata Download track Track metadata identifier NGENCTO6VY5N2O data_source ENCODE Download track Download number_of_intervals 3,042 bp_covered 690,856 output_type IDR thresholded peaks genome_build hg38 cell_type Ishikawa biosample_type Cell line biosample_term_id EFO:0005718 tissue_category Female Reproductive encode_experiment_id ENCSR000BIZ biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ESR1 assay TF ChIP-seq file_format bed narrowPeak file_size 51,996 downloaded_date 09/10/2024 release_date 01/02/2021 date_added_to_filer 10/01/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF914XUK.bed.gz processed_file_md5 9a3b03206863c614872625d204040ff4 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF914XUK.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF914XUK.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF914XUK/@@download/ENCFF914XUK.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF914XUK.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 e87e61026653fd9c310eb41652c0f880 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens Ishikawa treated with 0.02% dimethyl sulfoxide for 1 hour;Lab=Richard Myers, HAIB;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,ENCYCLOPEDIAv2,RegulomeDB_2_1,RegulomeDB_2_2;Life_stage_age=adult 39 years;Reference=PMID:22710073;External_resources=FactorBook:ENCSR000BIZ,UCSC-ENCODE-hg19:wgEncodeEH001537,GEO:GSM803421;Project=ENCODE;Award=U54HG004576;Experiment_date_released=2011-07-18;Submitted_track_name=pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=Ishikawa;ENCODE_cell_slims=cancer cell;ENCODE_system_slims=reproductive system;ENCODE_biosample_term_synonyms=Ishikawa cell;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0005718;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name ENCODE Ishikawa (repl. 1, 2) TF ChIP-seq ESR1 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000BIZ] [Life stage: Adult] [TF ChIP-seq peaks]
ESR1 • T47D NGENCVVWC46Q6J • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq T47D TF Show metadata Download track Track metadata identifier NGENCVVWC46Q6J data_source ENCODE Download track Download number_of_intervals 2,442 bp_covered 463,980 output_type IDR thresholded peaks genome_build hg38 cell_type T47D biosample_type Cell line biosample_term_id EFO:0001247 tissue_category Breast encode_experiment_id ENCSR000BQD biological_replicate 1 technical_replicate 1_1 antibody ESR1 assay TF ChIP-seq file_format bed narrowPeak file_size 46,957 downloaded_date 07/10/2025 release_date 01/06/2021 date_added_to_filer 07/30/2025 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF682BUL.bed.gz processed_file_md5 dbb080d6360b1cb34c62b11e44589eb3 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF682BUL.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF682BUL.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF682BUL/@@download/ENCFF682BUL.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF682BUL.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 cd5006b73dd0cbab2dfec916c74aef94 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens T47D treated with 100 nM bisphenol A for 30 minutes;Lab=Richard Myers, HAIB;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=adult 54 years;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH002299,FactorBook:ENCSR000BQD,GEO:GSM1010823;Project=ENCODE;Award=U54HG004576;Experiment_date_released=2012-02-29,2011-07-18;Submitted_track_name=rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=T47D;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_system_slims=integumental system,exocrine system;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001247;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name ENCODE T47D (repl. 1) TF ChIP-seq ESR1 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000BQD] [Life stage: Adult] [TF ChIP-seq peaks]
ESR1 • T47D NGENCVY2265YMN • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq T47D TF Show metadata Download track Track metadata identifier NGENCVY2265YMN data_source ENCODE Download track Download number_of_intervals 3,714 bp_covered 885,111 output_type conservative IDR thresholded peaks genome_build hg38 cell_type T47D biosample_type Cell line biosample_term_id EFO:0001247 tissue_category Breast encode_experiment_id ENCSR000BQD biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ESR1 assay TF ChIP-seq file_format bed narrowPeak file_size 72,983 downloaded_date 07/10/2025 release_date 01/06/2021 date_added_to_filer 07/30/2025 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF764DDV.bed.gz processed_file_md5 1bea6e55fe8d7cac04d4f0c6bf24fecb wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF764DDV.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF764DDV.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF764DDV/@@download/ENCFF764DDV.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF764DDV.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 b5e84b363de8901ca8531fcd393cc1d0 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq conservative IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens T47D treated with 100 nM bisphenol A for 30 minutes;Lab=Richard Myers, HAIB;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=adult 54 years;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH002299,FactorBook:ENCSR000BQD,GEO:GSM1010823;Project=ENCODE;Award=U54HG004576;Experiment_date_released=2012-02-29,2011-07-18;Submitted_track_name=rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=T47D;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_system_slims=integumental system,exocrine system;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001247;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name ENCODE T47D (repl. 1, 2) TF ChIP-seq ESR1 conservative IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000BQD] [Life stage: Adult] [TF ChIP-seq peaks]
ESR1 • T47D NGENCXKAVM3HVA • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq T47D TF Show metadata Download track Track metadata identifier NGENCXKAVM3HVA data_source ENCODE Download track Download number_of_intervals 9,654 bp_covered 2,555,633 output_type IDR thresholded peaks genome_build hg38 cell_type T47D biosample_type Cell line biosample_term_id EFO:0001247 tissue_category Breast encode_experiment_id ENCSR000BKN biological_replicate 2 technical_replicate 2_1 antibody ESR1 assay TF ChIP-seq file_format bed narrowPeak file_size 183,904 downloaded_date 07/10/2025 release_date 12/28/2020 date_added_to_filer 07/30/2025 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF643WYZ.bed.gz processed_file_md5 2086c40cfc35da4b59afe6ea6e2d27b1 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF643WYZ.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF643WYZ.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF643WYZ/@@download/ENCFF643WYZ.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF643WYZ.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 c755c1d9dfb40d9ac3916de4f55bc437 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens T47D treated with 10 nM estradiol for 1 hour;Lab=Richard Myers, HAIB;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=adult 54 years;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH001577,FactorBook:ENCSR000BKN,GEO:GSM803539;Project=ENCODE;Award=U54HG004576;Experiment_date_released=2011-07-18;Submitted_track_name=rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=T47D;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_system_slims=integumental system,exocrine system;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001247;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name ENCODE T47D (repl. 2) TF ChIP-seq ESR1 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000BKN] [Life stage: Adult] [TF ChIP-seq peaks]
ESR1 • Ishikawa NGFTB2GGETRVDW • Factorbook34755879 Motif finding Ishikawa TFBS Show metadata Download track Track metadata identifier NGFTB2GGETRVDW data_source Factorbook Download track Download number_of_intervals 156 bp_covered 3,900 output_type transcription factor binding sites significant genome_build hg38 cell_type Ishikawa biosample_type Cell line biosample_term_id EFO:0005718 tissue_category Female Reproductive encode_experiment_id ENCSR000BIY biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ESR1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 2,729 downloaded_date 07/10/2024 release_date 07/18/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF759IOM_TCTCATCCTGTGACTDAGAATGCCT_filtered.bed.gz processed_file_md5 e2949130fa737c441dbecb154a92c784 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF759IOM_TCTCATCCTGTGACTDAGAATGCCT_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF759IOM_TCTCATCCTGTGACTDAGAATGCCT_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF759IOM_TCTCATCCTGTGACTDAGAATGCCT.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF759IOM_TCTCATCCTGTGACTDAGAATGCCT.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 43aa3aad23a1d069f21b5fe2072468f3 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens Ishikawa treated with 10 nM estradiol for 1 hour;Original_cell_type=Ishikawa;Lab=Richard Myers, HAIB;System=reproductive system;ENCODE_BED_id=ENCFF759IOM;ENCODE_bigBed_id=ENCFF895KXU;PMID=34755879;Motif_sequence=TCTCATCCTGTGACTDAGAATGCCT;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0005718;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook Ishikawa (repl. 1, 2) Motif finding ESR1 transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR000BIY] [Life stage: Adult] [TFBS]
ESR1 • T47D NGFTB4O2SCR4JD • Factorbook34755879 Motif finding T47D TFBS Show metadata Download track Track metadata identifier NGFTB4O2SCR4JD data_source Factorbook Download track Download number_of_intervals 1,250 bp_covered 18,750 output_type transcription factor binding sites all genome_build hg38 cell_type T47D biosample_type Cell line biosample_term_id EFO:0001247 tissue_category Breast encode_experiment_id ENCSR000BLL biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ESR1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 20,445 downloaded_date 07/10/2024 release_date 07/18/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF942CLE_RRACTACAABTCCCA_sorted.bed.gz processed_file_md5 162125395533cd1d42ad33f0770273d0 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF942CLE_RRACTACAABTCCCA_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF942CLE_RRACTACAABTCCCA_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF942CLE_RRACTACAABTCCCA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF942CLE_RRACTACAABTCCCA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 ec81bc848fb692e55dff691b1eca0f19 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens T47D treated with 0.02% dimethyl sulfoxide for 1 hour;Original_cell_type=T47D;Lab=Richard Myers, HAIB;System=exocrine system,integumental system;ENCODE_BED_id=ENCFF942CLE;ENCODE_bigBed_id=ENCFF306ZIY;PMID=34755879;Motif_sequence=RRACTACAABTCCCA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001247;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook T47D (repl. 1, 2) Motif finding ESR1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BLL] [Life stage: Adult] [TFBS]
ESR1 • Ishikawa NGFTB6ZDLSDVAZ • Factorbook34755879 Motif finding Ishikawa TFBS Show metadata Download track Track metadata identifier NGFTB6ZDLSDVAZ data_source Factorbook Download track Download number_of_intervals 45 bp_covered 1,350 output_type transcription factor binding sites significant genome_build hg38 cell_type Ishikawa biosample_type Cell line biosample_term_id EFO:0005718 tissue_category Female Reproductive encode_experiment_id ENCSR000BQR biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ESR1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 1,294 downloaded_date 07/10/2024 release_date 02/29/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF101OMM_YGTGCYRACCTCCTRTCTCATCCTGTGACT_filtered.bed.gz processed_file_md5 aa30ac6a85c3f00768fa71b1ef414001 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF101OMM_YGTGCYRACCTCCTRTCTCATCCTGTGACT_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF101OMM_YGTGCYRACCTCCTRTCTCATCCTGTGACT_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF101OMM_YGTGCYRACCTCCTRTCTCATCCTGTGACT.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF101OMM_YGTGCYRACCTCCTRTCTCATCCTGTGACT.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 9503ddb30dda3fad05371c095173914a data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens Ishikawa treated with 100 nM bisphenol A for 1 hour;Original_cell_type=Ishikawa;Lab=Richard Myers, HAIB;System=reproductive system;ENCODE_BED_id=ENCFF101OMM;ENCODE_bigBed_id=ENCFF201BHI;PMID=34755879;Motif_sequence=YGTGCYRACCTCCTRTCTCATCCTGTGACT;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0005718;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook Ishikawa (repl. 1, 2) Motif finding ESR1 transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR000BQR] [Life stage: Adult] [TFBS]
ESR1 • T47D NGFTB7SJPRQF2B • Factorbook34755879 Motif finding T47D TFBS Show metadata Download track Track metadata identifier NGFTB7SJPRQF2B data_source Factorbook Download track Download number_of_intervals 13 bp_covered 338 output_type transcription factor binding sites significant genome_build hg38 cell_type T47D biosample_type Cell line biosample_term_id EFO:0001247 tissue_category Breast encode_experiment_id ENCSR000BJS biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ESR1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 633 downloaded_date 07/10/2024 release_date 07/18/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF595DPU_TTAASATAAGGAAGTCTGTTAACCAA_filtered.bed.gz processed_file_md5 037b2ab6fbad1ea6fc52c551260875a6 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF595DPU_TTAASATAAGGAAGTCTGTTAACCAA_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF595DPU_TTAASATAAGGAAGTCTGTTAACCAA_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF595DPU_TTAASATAAGGAAGTCTGTTAACCAA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF595DPU_TTAASATAAGGAAGTCTGTTAACCAA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 1f36f8352a30ecc9e27fef8380fd9ed9 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens T47D treated with 100 nM genistein for 1 hour;Original_cell_type=T47D;Lab=Richard Myers, HAIB;System=exocrine system,integumental system;ENCODE_BED_id=ENCFF595DPU;ENCODE_bigBed_id=ENCFF613BST;PMID=34755879;Motif_sequence=TTAASATAAGGAAGTCTGTTAACCAA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001247;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook T47D (repl. 1, 2) Motif finding ESR1 transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR000BJS] [Life stage: Adult] [TFBS]
ESR1 • T47D NGFTBBF45BADHA • Factorbook34755879 Motif finding T47D TFBS Show metadata Download track Track metadata identifier NGFTBBF45BADHA data_source Factorbook Download track Download number_of_intervals 790 bp_covered 20,540 output_type transcription factor binding sites significant genome_build hg38 cell_type T47D biosample_type Cell line biosample_term_id EFO:0001247 tissue_category Breast encode_experiment_id ENCSR000BLL biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ESR1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 16,503 downloaded_date 07/10/2024 release_date 07/18/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF942CLE_GRACTACAAYTCCCAGVAKGCHBYGC_filtered.bed.gz processed_file_md5 95d39f8ed29073718d77a4c4dc27c876 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF942CLE_GRACTACAAYTCCCAGVAKGCHBYGC_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF942CLE_GRACTACAAYTCCCAGVAKGCHBYGC_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF942CLE_GRACTACAAYTCCCAGVAKGCHBYGC.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF942CLE_GRACTACAAYTCCCAGVAKGCHBYGC.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 8e0a757ad26028c5d366a68918dcc4bb data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens T47D treated with 0.02% dimethyl sulfoxide for 1 hour;Original_cell_type=T47D;Lab=Richard Myers, HAIB;System=exocrine system,integumental system;ENCODE_BED_id=ENCFF942CLE;ENCODE_bigBed_id=ENCFF306ZIY;PMID=34755879;Motif_sequence=GRACTACAAYTCCCAGVAKGCHBYGC;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001247;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook T47D (repl. 1, 2) Motif finding ESR1 transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR000BLL] [Life stage: Adult] [TFBS]
ESR1 • Ishikawa NGFTBBH5CLMZ5H • Factorbook34755879 Motif finding Ishikawa TFBS Show metadata Download track Track metadata identifier NGFTBBH5CLMZ5H data_source Factorbook Download track Download number_of_intervals 1,393 bp_covered 25,074 output_type transcription factor binding sites all genome_build hg38 cell_type Ishikawa biosample_type Cell line biosample_term_id EFO:0005718 tissue_category Female Reproductive encode_experiment_id ENCSR000BKL biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ESR1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 27,089 downloaded_date 07/10/2024 release_date 07/18/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF535KNW_RGACTYTTATTTTGAARK_sorted.bed.gz processed_file_md5 d00e48071c356fc8b1003b3ba8a64fe4 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF535KNW_RGACTYTTATTTTGAARK_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF535KNW_RGACTYTTATTTTGAARK_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF535KNW_RGACTYTTATTTTGAARK.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF535KNW_RGACTYTTATTTTGAARK.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 36915b7ffa8d6749fc8bdf0046c1426a data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens Ishikawa treated with 100 nM genistein for 1 hour;Original_cell_type=Ishikawa;Lab=Richard Myers, HAIB;System=reproductive system;ENCODE_BED_id=ENCFF535KNW;ENCODE_bigBed_id=ENCFF467OTI;PMID=34755879;Motif_sequence=RGACTYTTATTTTGAARK;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0005718;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook Ishikawa (repl. 1, 2) Motif finding ESR1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BKL] [Life stage: Adult] [TFBS]
ESR1 • Ishikawa NGFTBC2FOB56UW • Factorbook34755879 Motif finding Ishikawa TFBS Show metadata Download track Track metadata identifier NGFTBC2FOB56UW data_source Factorbook Download track Download number_of_intervals 183 bp_covered 3,843 output_type transcription factor binding sites significant genome_build hg38 cell_type Ishikawa biosample_type Cell line biosample_term_id EFO:0005718 tissue_category Female Reproductive encode_experiment_id ENCSR000BIZ biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ESR1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 3,658 downloaded_date 07/10/2024 release_date 07/18/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF134DCQ_SSGSCGCRGDGCMTGCTGGGA_filtered.bed.gz processed_file_md5 6870027482045b7080696b9208794ac2 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF134DCQ_SSGSCGCRGDGCMTGCTGGGA_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF134DCQ_SSGSCGCRGDGCMTGCTGGGA_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF134DCQ_SSGSCGCRGDGCMTGCTGGGA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF134DCQ_SSGSCGCRGDGCMTGCTGGGA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 6c96f4bb3c0ab896c7762cb6e822fb16 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens Ishikawa treated with 0.02% dimethyl sulfoxide for 1 hour;Original_cell_type=Ishikawa;Lab=Richard Myers, HAIB;System=reproductive system;ENCODE_BED_id=ENCFF134DCQ;ENCODE_bigBed_id=ENCFF914XUK;PMID=34755879;Motif_sequence=SSGSCGCRGDGCMTGCTGGGA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0005718;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook Ishikawa (repl. 1, 2) Motif finding ESR1 transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR000BIZ] [Life stage: Adult] [TFBS]
ESR1 • Ishikawa NGFTBDU536DL4B • Factorbook34755879 Motif finding Ishikawa TFBS Show metadata Download track Track metadata identifier NGFTBDU536DL4B data_source Factorbook Download track Download number_of_intervals 1,605 bp_covered 33,705 output_type transcription factor binding sites all genome_build hg38 cell_type Ishikawa biosample_type Cell line biosample_term_id EFO:0005718 tissue_category Female Reproductive encode_experiment_id ENCSR000BIZ biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ESR1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 32,202 downloaded_date 07/10/2024 release_date 07/18/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF134DCQ_KGCMTBCTGGGARTTGTAGTY_sorted.bed.gz processed_file_md5 21088abe1269b55b739cf242dc844922 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF134DCQ_KGCMTBCTGGGARTTGTAGTY_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF134DCQ_KGCMTBCTGGGARTTGTAGTY_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF134DCQ_KGCMTBCTGGGARTTGTAGTY.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF134DCQ_KGCMTBCTGGGARTTGTAGTY.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 285aa2f10e7177c51a5a74ca76efadc5 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens Ishikawa treated with 0.02% dimethyl sulfoxide for 1 hour;Original_cell_type=Ishikawa;Lab=Richard Myers, HAIB;System=reproductive system;ENCODE_BED_id=ENCFF134DCQ;ENCODE_bigBed_id=ENCFF914XUK;PMID=34755879;Motif_sequence=KGCMTBCTGGGARTTGTAGTY;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0005718;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook Ishikawa (repl. 1, 2) Motif finding ESR1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BIZ] [Life stage: Adult] [TFBS]
ESR1 • Ishikawa NGFTBDWKCUDBXI • Factorbook34755879 Motif finding Ishikawa TFBS Show metadata Download track Track metadata identifier NGFTBDWKCUDBXI data_source Factorbook Download track Download number_of_intervals 8 bp_covered 144 output_type transcription factor binding sites significant genome_build hg38 cell_type Ishikawa biosample_type Cell line biosample_term_id EFO:0005718 tissue_category Female Reproductive encode_experiment_id ENCSR000BIZ biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ESR1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 504 downloaded_date 07/10/2024 release_date 07/18/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF134DCQ_TTTCAAAATAAAAGTCYY_filtered.bed.gz processed_file_md5 5f8e9cc9e7c7a899ce7c1d0d56dac97f wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF134DCQ_TTTCAAAATAAAAGTCYY_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF134DCQ_TTTCAAAATAAAAGTCYY_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF134DCQ_TTTCAAAATAAAAGTCYY.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF134DCQ_TTTCAAAATAAAAGTCYY.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 47f5020e5f878d5863d9885c3de8084a data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens Ishikawa treated with 0.02% dimethyl sulfoxide for 1 hour;Original_cell_type=Ishikawa;Lab=Richard Myers, HAIB;System=reproductive system;ENCODE_BED_id=ENCFF134DCQ;ENCODE_bigBed_id=ENCFF914XUK;PMID=34755879;Motif_sequence=TTTCAAAATAAAAGTCYY;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0005718;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook Ishikawa (repl. 1, 2) Motif finding ESR1 transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR000BIZ] [Life stage: Adult] [TFBS]
ESR1 • Ishikawa NGFTBEANMLFY4B • Factorbook34755879 Motif finding Ishikawa TFBS Show metadata Download track Track metadata identifier NGFTBEANMLFY4B data_source Factorbook Download track Download number_of_intervals 2,292 bp_covered 18,336 output_type transcription factor binding sites all genome_build hg38 cell_type Ishikawa biosample_type Cell line biosample_term_id EFO:0005718 tissue_category Female Reproductive encode_experiment_id ENCSR000BQR biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ESR1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 24,881 downloaded_date 07/10/2024 release_date 02/29/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF101OMM_CAGCAGGR_sorted.bed.gz processed_file_md5 7b5480537492870d16c6114d08e7f27f wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF101OMM_CAGCAGGR_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF101OMM_CAGCAGGR_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF101OMM_CAGCAGGR.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF101OMM_CAGCAGGR.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 b931b07ec00975214db54297cb2ad757 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens Ishikawa treated with 100 nM bisphenol A for 1 hour;Original_cell_type=Ishikawa;Lab=Richard Myers, HAIB;System=reproductive system;ENCODE_BED_id=ENCFF101OMM;ENCODE_bigBed_id=ENCFF201BHI;PMID=34755879;Motif_sequence=CAGCAGGR;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0005718;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook Ishikawa (repl. 1, 2) Motif finding ESR1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BQR] [Life stage: Adult] [TFBS]
ESR1 • T47D NGFTBFROCAMB2A • Factorbook34755879 Motif finding T47D TFBS Show metadata Download track Track metadata identifier NGFTBFROCAMB2A data_source Factorbook Download track Download number_of_intervals 4,276 bp_covered 29,932 output_type transcription factor binding sites all genome_build hg38 cell_type T47D biosample_type Cell line biosample_term_id EFO:0001247 tissue_category Breast encode_experiment_id ENCSR000BKN biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ESR1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 42,244 downloaded_date 07/10/2024 release_date 07/18/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF597QIF_RGGKCAG_sorted.bed.gz processed_file_md5 82ec217b223cad2cd44d3b12fb35c38b wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF597QIF_RGGKCAG_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF597QIF_RGGKCAG_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF597QIF_RGGKCAG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF597QIF_RGGKCAG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 3845279623580188986456596e358dd0 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens T47D treated with 10 nM estradiol for 1 hour;Original_cell_type=T47D;Lab=Richard Myers, HAIB;System=exocrine system,integumental system;ENCODE_BED_id=ENCFF597QIF;ENCODE_bigBed_id=ENCFF294NPW;PMID=34755879;Motif_sequence=RGGKCAG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001247;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook T47D (repl. 1, 2) Motif finding ESR1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BKN] [Life stage: Adult] [TFBS]
ESR1 • Ishikawa NGFTBGAVKPHTAH • Factorbook34755879 Motif finding Ishikawa TFBS Show metadata Download track Track metadata identifier NGFTBGAVKPHTAH data_source Factorbook Download track Download number_of_intervals 10,261 bp_covered 153,915 output_type transcription factor binding sites all genome_build hg38 cell_type Ishikawa biosample_type Cell line biosample_term_id EFO:0005718 tissue_category Female Reproductive encode_experiment_id ENCSR000BIY biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ESR1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 173,666 downloaded_date 07/10/2024 release_date 07/18/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF759IOM_RGGTCACYVTGMCCY_sorted.bed.gz processed_file_md5 555e81da2fac84cc450f6d99a930dc44 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF759IOM_RGGTCACYVTGMCCY_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF759IOM_RGGTCACYVTGMCCY_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF759IOM_RGGTCACYVTGMCCY.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF759IOM_RGGTCACYVTGMCCY.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 edf80d691e6bee42a7a3c1778517ff2c data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens Ishikawa treated with 10 nM estradiol for 1 hour;Original_cell_type=Ishikawa;Lab=Richard Myers, HAIB;System=reproductive system;ENCODE_BED_id=ENCFF759IOM;ENCODE_bigBed_id=ENCFF895KXU;PMID=34755879;Motif_sequence=RGGTCACYVTGMCCY;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0005718;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook Ishikawa (repl. 1, 2) Motif finding ESR1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BIY] [Life stage: Adult] [TFBS]
ESR1 • Ishikawa NGFTBGCBRFDO2H • Factorbook34755879 Motif finding Ishikawa TFBS Show metadata Download track Track metadata identifier NGFTBGCBRFDO2H data_source Factorbook Download track Download number_of_intervals 1 bp_covered 21 output_type transcription factor binding sites significant genome_build hg38 cell_type Ishikawa biosample_type Cell line biosample_term_id EFO:0005718 tissue_category Female Reproductive encode_experiment_id ENCSR000BKL biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ESR1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 387 downloaded_date 07/10/2024 release_date 07/18/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF535KNW_SGKYGCCMTGGCAACRGBYVY_filtered.bed.gz processed_file_md5 ed2c269000140813c6410b950f8ac54e wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF535KNW_SGKYGCCMTGGCAACRGBYVY_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF535KNW_SGKYGCCMTGGCAACRGBYVY_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF535KNW_SGKYGCCMTGGCAACRGBYVY.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF535KNW_SGKYGCCMTGGCAACRGBYVY.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 0c1562e1929822a348b150d7c243e7c4 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens Ishikawa treated with 100 nM genistein for 1 hour;Original_cell_type=Ishikawa;Lab=Richard Myers, HAIB;System=reproductive system;ENCODE_BED_id=ENCFF535KNW;ENCODE_bigBed_id=ENCFF467OTI;PMID=34755879;Motif_sequence=SGKYGCCMTGGCAACRGBYVY;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0005718;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook Ishikawa (repl. 1, 2) Motif finding ESR1 transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR000BKL] [Life stage: Adult] [TFBS]